Miyakogusa Predicted Gene

Lj4g3v0669460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0669460.1 Non Characterized Hit- tr|C5XHY5|C5XHY5_SORBI
Putative uncharacterized protein Sb03g011625
(Fragment,31.87,4e-19,SWIM,Zinc finger, SWIM-type; ZF_SWIM,Zinc
finger, SWIM-type; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NA,CUFF.47861.1
         (221 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g464800.1 | hypothetical protein | LC | chr8:22967551-2296...   130   1e-30
Medtr2g048835.1 | hypothetical protein | LC | chr2:21544236-2154...    91   9e-19
Medtr7g090610.1 | hypothetical protein | LC | chr7:35661825-3566...    82   3e-16
Medtr3g436320.1 | hypothetical protein | LC | chr3:12205964-1220...    79   3e-15
Medtr0140s0100.1 | hypothetical protein | LC | scaffold0140:3902...    62   4e-10
Medtr1g053295.1 | hypothetical protein | LC | chr1:22356502-2235...    59   3e-09
Medtr0152s0060.1 | PIF1-like helicase | LC | scaffold0152:9518-1...    54   8e-08
Medtr0152s0010.1 | hypothetical protein | LC | scaffold0152:1173...    52   6e-07

>Medtr8g464800.1 | hypothetical protein | LC |
           chr8:22967551-22968879 | 20130731
          Length = 380

 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 108/183 (59%), Gaps = 2/183 (1%)

Query: 31  MMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIPKKMWCKHAMNFYPRCDVIINNLSES 90
           M  AAKA+Y + W   M +++++N  A+ +L+  P + W K    F  +CDV++NN+ ++
Sbjct: 1   MWKAAKASYPQEWEKSMREIRSINPEAHKYLMQTPLRHWSKSWFRFDSKCDVLVNNMLDT 60

Query: 91  FNSTILVARDKPILTMFEWIKTYLMTRFAVLNEKMIKWK-GDVCPKPRIRMDREIKAAGD 149
           FNS IL  R+KPI+TMFE I+ YLM R+A    KMI+ + G V P  + ++ +E + +  
Sbjct: 61  FNSVILGPREKPIVTMFEEIRCYLMERWARNRSKMIELEAGAVLPNNKKKLLKERERSRF 120

Query: 150 WISRWTGQGMFEV-QHMEGGDGFVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGNDPED 208
           W+ R +G  +FEV    +  + + V+L+   C+C  W L  IP  HA+     R  DP+D
Sbjct: 121 WMRRVSGDMLFEVYNRNQTSEQYAVNLDAQTCSCRSWMLTGIPGCHAITCYMDRKLDPDD 180

Query: 209 YVH 211
           Y H
Sbjct: 181 YFH 183


>Medtr2g048835.1 | hypothetical protein | LC |
           chr2:21544236-21542626 | 20130731
          Length = 486

 Score = 90.9 bits (224), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 80/140 (57%), Gaps = 2/140 (1%)

Query: 38  TYERAWVAKMDQLKALNEPAYNWLIAIPKKMWCKHAMNFYPRCDVIINNLSESFNSTILV 97
           + + A+  +M  +K ++E A+N+L  I  + W +        CD ++NN+SE+FN  I+V
Sbjct: 186 SEDSAFEREMKAIKEISEEAFNYLCEIEPRHWTRALFKGDSNCDTLVNNISEAFNFVIVV 245

Query: 98  ARDKPILTMFEWIKTYLMTRFAVLNEKMIKWK-GDVCPKPRIRMDREIKAAGDWISRWTG 156
            R KP+++M E I+ Y+M  + +  EK+ K+  GDV P  + ++++E     +W+ R  G
Sbjct: 246 PRSKPVVSMLEDIRVYVMEMWQLNREKIAKYSDGDVLPNIKKKLEKESSYTNNWLVRQGG 305

Query: 157 QGMFEVQHMEGG-DGFVVDL 175
              F+V HM    D F V+L
Sbjct: 306 DNDFQVTHMSHTRDKFAVNL 325


>Medtr7g090610.1 | hypothetical protein | LC |
           chr7:35661825-35663059 | 20130731
          Length = 360

 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 1/134 (0%)

Query: 87  LSESFNSTILVARDKPILTMFEWIKTYLMTRFAVLNEKMIKWKGDVCPKPRIRMDREIKA 146
           +SE+FNSTI++ R KPI+TM E I+ YL+ ++     K+  ++ DV P  + R+ RE   
Sbjct: 1   MSEAFNSTIVIPRQKPIVTMCEDIRVYLIEKWDANRTKIASYEDDVLPNIKKRIARESAY 60

Query: 147 AGDWISRWTGQGMFEVQHMEG-GDGFVVDLNRNKCTCNLWELVEIPCRHALAGVHYRGND 205
             +W+ R + +  FEV+H+ G G  + V+L    C C  W L  +PC H ++ +  +  +
Sbjct: 61  TSNWLVRRSTKFDFEVRHVSGTGYKYHVNLQMWVCDCRKWLLTALPCCHDISCMRNQDLN 120

Query: 206 PEDYVHQCYKRDAY 219
             D+V   YK D Y
Sbjct: 121 VYDFVPDIYKNDKY 134


>Medtr3g436320.1 | hypothetical protein | LC |
           chr3:12205964-12205098 | 20130731
          Length = 168

 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 2/68 (2%)

Query: 47  MDQLKALNEPAYNWLIAIPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARD--KPIL 104
           M Q+KA  + AY WL+ IP   WCKHA  FY RCDV++NNLSESFN+TIL+ R+   PI 
Sbjct: 1   MAQIKAEKQEAYEWLMNIPTNKWCKHAFPFYSRCDVLMNNLSESFNATILLQREGITPIN 60

Query: 105 TMFEWIKT 112
              +W KT
Sbjct: 61  GQNKWPKT 68


>Medtr0140s0100.1 | hypothetical protein | LC |
          scaffold0140:39029-36914 | 20130731
          Length = 212

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 26/33 (78%), Positives = 28/33 (84%)

Query: 5  EHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKA 37
          EH  C+RHLYANFKKKF GG +IRDLMMGAAK 
Sbjct: 38 EHRLCLRHLYANFKKKFGGGTLIRDLMMGAAKG 70


>Medtr1g053295.1 | hypothetical protein | LC |
          chr1:22356502-22358430 | 20130731
          Length = 153

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 5  EHIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAY 58
          E  FCVRHLY+N +KK   G VI+DLM  AAK++Y +AW   M +L+A++E A+
Sbjct: 9  EQRFCVRHLYSNLRKK-CAGKVIKDLMWKAAKSSYPQAWEKTMKELRAVSEEAF 61



 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 1/52 (1%)

Query: 8   FCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYN 59
           FCVRHLY+N +KK   G VI+DLM  AAK++Y +AW   M +L+A++E A N
Sbjct: 85  FCVRHLYSNLRKK-CAGKVIKDLMWKAAKSSYPQAWEKTMKELRAVSEEACN 135


>Medtr0152s0060.1 | PIF1-like helicase | LC |
           scaffold0152:9518-13273 | 20130731
          Length = 396

 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 20/116 (17%)

Query: 6   HIFCVRHLYANFKKKFSGGAVIRDLMMGAAKATYERAWVAKMDQLKALNEPAYNWLIAIP 65
           HIF     + N++K F G +  ++     A+   E AW   M QL+              
Sbjct: 15  HIF-----HGNWRKTFPGQSSFKESFWTTARKLDEEAW-KDMIQLRP------------- 55

Query: 66  KKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTMFEWIKTYLMTRFAVL 121
             MW +   +    CD  +NN+ E+ N  IL  RDKPI+++ E +K Y+  R   L
Sbjct: 56  -SMWIRSTYSVQSHCDFQVNNMCEALNKAILEHRDKPIISLIEGLKFYMTARIVRL 110


>Medtr0152s0010.1 | hypothetical protein | LC |
           scaffold0152:1173-1493 | 20130731
          Length = 106

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%)

Query: 47  MDQLKALNEPAYNWLIAIPKKMWCKHAMNFYPRCDVIINNLSESFNSTILVARDKPILTM 106
           M+ +K L+E A+  +I +   MW + A +   + D  +NN+ E+ N  IL  RDKPI+ +
Sbjct: 1   MENMKKLDEEAWKDMIQLRPSMWTRSAYSVQSQFDFQLNNMCEALNKAILEHRDKPIIFL 60

Query: 107 FEWIKTYLMTRFAVL 121
            E +K Y+  R   L
Sbjct: 61  IEGLKFYMTARIVRL 75