Miyakogusa Predicted Gene

Lj4g3v0668250.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0668250.2 Non Characterized Hit- tr|I1NDG8|I1NDG8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58200
PE,75.84,0,NRDE,Protein of unknown function DUF833; SUBFAMILY NOT
NAMED,NULL; SER/THR-RICH PROTEIN T10 IN DGCR ,CUFF.47928.2
         (266 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g083440.1 | ser/thr-rich protein T10 in DGCR region-like p...   400   e-112
Medtr3g074080.1 | ser/thr-rich protein T10 in DGCR region-like p...   276   2e-74

>Medtr4g083440.1 | ser/thr-rich protein T10 in DGCR region-like
           protein | HC | chr4:32470418-32471984 | 20130731
          Length = 275

 Score =  400 bits (1027), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/254 (74%), Positives = 219/254 (86%), Gaps = 3/254 (1%)

Query: 13  KYPFILLLNRDEFHSRPTDPLAWWPGETILAGRDALGGGTWLGSTRNGRVAFLTNFRELP 72
           KYPF+LLLNRDEFHSRPT+PLAWW GETIL GRD L GGTWL S++NGR+AFLTNFREL 
Sbjct: 23  KYPFLLLLNRDEFHSRPTEPLAWWDGETILGGRDVLCGGTWLASSKNGRLAFLTNFREL- 81

Query: 73  NQNLPSPNSRGHLPLRFLQGNQSPEEFAEQVLKEAHQYNGFNLILADMSTSSMVYVFNRP 132
            QN+P  N+RG LPLRFLQ ++SPEEFAE+VLKEAH YNGFNL+LAD+ TS+MVYVFNRP
Sbjct: 82  -QNIPQSNTRGDLPLRFLQSDKSPEEFAEEVLKEAHLYNGFNLVLADICTSTMVYVFNRP 140

Query: 133 KPDLLSVAPGVHVLTNSALDATWPKAERLRHSFKELIDQYGESEFPIKEMVEKLMTNTIK 192
               LSV PG+HVLTN++LDA W KAERLRHSFKEL+DQYG+ EFPIKEMVEKLMTNT+K
Sbjct: 141 NHGYLSVTPGIHVLTNASLDAPWSKAERLRHSFKELVDQYGDGEFPIKEMVEKLMTNTVK 200

Query: 193 DEE-YMLPGIYPPERELPVSSVFVDVEFPLLGRYGTRSSSALLVKSNKEATFYEKHLDQE 251
           D++  +LPGI PPE E P+SS+FVD +FP +G YGTRS+SAL V SNKE TFYEKHLDQ+
Sbjct: 201 DDDKCLLPGIRPPEFEFPLSSIFVDTQFPSVGPYGTRSTSALFVTSNKEVTFYEKHLDQK 260

Query: 252 KWKEKMVTYQIIEA 265
           +WK+ MVTYQI E 
Sbjct: 261 QWKDNMVTYQISET 274


>Medtr3g074080.1 | ser/thr-rich protein T10 in DGCR region-like
           protein | LC | chr3:33453395-33449150 | 20130731
          Length = 385

 Score =  276 bits (706), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 132/266 (49%), Positives = 191/266 (71%), Gaps = 7/266 (2%)

Query: 1   MCIAVFMWQAHPKYPFILLLNRDEFHSRPTDPLAWWPGETILAGRDALGGGTWLGSTRNG 60
           MCIA+F+WQ+HP YPF+LL NRDE+H+RPT  ++WW    I+ GRD +GGGTWL  +  G
Sbjct: 1   MCIALFLWQSHPLYPFLLLNNRDEYHNRPTKKVSWWEECDIVGGRDEIGGGTWLACSSQG 60

Query: 61  RVAFLTNFRELPNQNLPSPNSRGHLPLRFLQGNQSPEEFAEQVLKEAHQYNGFNLILADM 120
           +VAFLTN  EL     P   +RG LPL FL+ +++P+EFAE + +EA  YNGFNL++AD+
Sbjct: 61  KVAFLTNVLEL--HTCPEAKTRGDLPLMFLKSSKNPKEFAESLKREAQYYNGFNLVIADI 118

Query: 121 STSSMVYVFNRPKPDLLSVA---PGVHVLTNSALDATWPKAERLRHSFKELIDQYGESEF 177
           ++ SMVY+ NRPK   ++V    PG+HVL+N+ L++ W KA+RL+  FKE + + GE E 
Sbjct: 119 NSKSMVYISNRPKGQPITVQEVPPGLHVLSNAKLNSPWHKAQRLQFRFKEHLAKNGEGEI 178

Query: 178 PIKEMVEKLMTNTIKDEEYMLPGIYPPERELPVSSVFVDVEFPLLGRYGTRSSSALLVKS 237
            +KE+++KLM + IK ++ MLP I   + E  +SS+FV+VE P LG YGTRSS+AL V+S
Sbjct: 179 HVKEVIKKLMKDKIKADKSMLPNICSLDWEFNLSSIFVEVETP-LGVYGTRSSAALTVRS 237

Query: 238 NKEATFYEKHLDQEK-WKEKMVTYQI 262
           + + +FYE +LD +  WK+ ++ + I
Sbjct: 238 SGKVSFYEDYLDDDNVWKDHVIDFHI 263