Miyakogusa Predicted Gene
- Lj4g3v0667970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0667970.1 Non Characterized Hit- tr|I3SIX3|I3SIX3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,96.23,0,SYNAPTOBREVIN,Synaptobrevin; V_SNARE,Synaptobrevin;
seg,NULL; Synaptobrevin,Synaptobrevin; no descri,CUFF.47835.1
(151 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g083490.1 | synaptobrevin-like protein | HC | chr4:3261613... 213 6e-56
Medtr2g028790.1 | synaptobrevin-like protein | HC | chr2:1069094... 200 5e-52
Medtr1g047720.1 | synaptobrevin-like protein | HC | chr1:1804372... 181 2e-46
Medtr4g022570.1 | synaptobrevin-like protein | HC | chr4:7537988... 180 4e-46
Medtr7g058900.1 | synaptobrevin-like protein | HC | chr7:2123807... 175 1e-44
Medtr1g047710.1 | synaptobrevin-like protein | HC | chr1:1803815... 162 1e-40
Medtr7g058640.1 | synaptobrevin-like protein | HC | chr7:2121475... 158 2e-39
Medtr7g058640.3 | synaptobrevin-like protein | HC | chr7:2121475... 158 2e-39
Medtr2g436870.1 | synaptobrevin-like protein | HC | chr2:1440722... 150 5e-37
Medtr1g111890.1 | synaptobrevin-like protein | HC | chr1:5059669... 145 1e-35
Medtr4g022470.1 | synaptobrevin-like protein | HC | chr4:7491645... 131 2e-31
Medtr7g058640.2 | synaptobrevin-like protein | HC | chr7:2121475... 126 9e-30
Medtr4g052550.1 | synaptobrevin-like protein | HC | chr4:1906845... 84 7e-17
Medtr5g089370.1 | synaptobrevin-like protein | HC | chr5:3884435... 79 1e-15
Medtr4g115390.1 | synaptobrevin-like protein | HC | chr4:4766012... 69 1e-12
Medtr4g022550.1 | synaptobrevin 1 | HC | chr4:7526330-7524987 | ... 67 9e-12
>Medtr4g083490.1 | synaptobrevin-like protein | HC |
chr4:32616135-32610150 | 20130731
Length = 220
Score = 213 bits (541), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/106 (96%), Positives = 104/106 (98%)
Query: 24 VAKGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENI 83
VAK GGG+ +TAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENI
Sbjct: 92 VAKYGGGKASTAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENI 151
Query: 84 EKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
EKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK
Sbjct: 152 EKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 197
>Medtr2g028790.1 | synaptobrevin-like protein | HC |
chr2:10690943-10695600 | 20130731
Length = 220
Score = 200 bits (508), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/106 (87%), Positives = 101/106 (95%)
Query: 24 VAKGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENI 83
V+K GG + +TA PNSLNKEFGPKLKEHMQYCVDHP+E+SKLAKVKAQVSEVKGVMMENI
Sbjct: 94 VSKYGGEKASTAPPNSLNKEFGPKLKEHMQYCVDHPDEISKLAKVKAQVSEVKGVMMENI 153
Query: 84 EKVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
EKVLDRGEKIELLVDKT+NLHHQAQDFR+SGT IRRKMWLQNMK+K
Sbjct: 154 EKVLDRGEKIELLVDKTDNLHHQAQDFRSSGTSIRRKMWLQNMKVK 199
>Medtr1g047720.1 | synaptobrevin-like protein | HC |
chr1:18043724-18041195 | 20130731
Length = 221
Score = 181 bits (459), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 95/104 (91%)
Query: 26 KGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEK 85
K GGG+ ATA+ SLNKE+GPKLK+ MQYCVDHPEE++KLAKVKAQVSEVKGVMMENIEK
Sbjct: 92 KYGGGKAATASARSLNKEYGPKLKQQMQYCVDHPEEINKLAKVKAQVSEVKGVMMENIEK 151
Query: 86 VLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
VLDRGEKIE+LVDKT+NL QAQDFR GTK++RKMW+QNMKIK
Sbjct: 152 VLDRGEKIEMLVDKTDNLRSQAQDFRTQGTKMKRKMWIQNMKIK 195
>Medtr4g022570.1 | synaptobrevin-like protein | HC |
chr4:7537988-7532569 | 20130731
Length = 219
Score = 180 bits (457), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 91/102 (89%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGGR TA SLNKEFGPKLKE MQYCV+HPEEVSKLAKVKAQVSEVKGVMMENI+KV+
Sbjct: 94 GGGRATTATAKSLNKEFGPKLKEQMQYCVEHPEEVSKLAKVKAQVSEVKGVMMENIDKVI 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGEKIE+LVDKTENL QAQDFR GT++RRKMW QNMKIK
Sbjct: 154 DRGEKIEVLVDKTENLRSQAQDFRQQGTQLRRKMWYQNMKIK 195
>Medtr7g058900.1 | synaptobrevin-like protein | HC |
chr7:21238076-21241305 | 20130731
Length = 221
Score = 175 bits (444), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 90/104 (86%)
Query: 26 KGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEK 85
K GG+ AA SLNKEFG KLKE MQYCV+HPEE+SKL+KV+AQVSEVKGVMMENIEK
Sbjct: 92 KYAGGKAENAAAKSLNKEFGSKLKEQMQYCVEHPEEISKLSKVQAQVSEVKGVMMENIEK 151
Query: 86 VLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
VLDRGEKIELLVDKTENL QAQDFR GTK+RRKMW QNMKIK
Sbjct: 152 VLDRGEKIELLVDKTENLRSQAQDFRQHGTKLRRKMWFQNMKIK 195
>Medtr1g047710.1 | synaptobrevin-like protein | HC |
chr1:18038155-18035932 | 20130731
Length = 137
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 76/97 (78%), Positives = 86/97 (88%)
Query: 26 KGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEK 85
K GGG ATA+ SLNKE+GPKLK+ MQYCVDHPEE++KLAKVKAQVSEVKGVMMENIEK
Sbjct: 40 KYGGGEAATASARSLNKEYGPKLKQQMQYCVDHPEEINKLAKVKAQVSEVKGVMMENIEK 99
Query: 86 VLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMW 122
VLDRGEKIE+LVDKT+NL QAQDFR GTK++RK+
Sbjct: 100 VLDRGEKIEMLVDKTDNLRSQAQDFRTQGTKMKRKIL 136
>Medtr7g058640.1 | synaptobrevin-like protein | HC |
chr7:21214758-21216356 | 20130731
Length = 214
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 88/102 (86%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA SLNKEFGPKLKEHMQYCV+HPEEVSKLAKVKAQVS+V+ VM+ENI++VL
Sbjct: 94 GGGKAATATSKSLNKEFGPKLKEHMQYCVEHPEEVSKLAKVKAQVSQVQDVMLENIDQVL 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
+R KI++L+DKT+NL QAQ FR G ++RRKMW QNMKIK
Sbjct: 154 NRQVKIDVLMDKTDNLRDQAQVFRREGGQLRRKMWFQNMKIK 195
>Medtr7g058640.3 | synaptobrevin-like protein | HC |
chr7:21214758-21216356 | 20130731
Length = 136
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/102 (72%), Positives = 88/102 (86%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ ATA SLNKEFGPKLKEHMQYCV+HPEEVSKLAKVKAQVS+V+ VM+ENI++VL
Sbjct: 16 GGGKAATATSKSLNKEFGPKLKEHMQYCVEHPEEVSKLAKVKAQVSQVQDVMLENIDQVL 75
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
+R KI++L+DKT+NL QAQ FR G ++RRKMW QNMKIK
Sbjct: 76 NRQVKIDVLMDKTDNLRDQAQVFRREGGQLRRKMWFQNMKIK 117
>Medtr2g436870.1 | synaptobrevin-like protein | HC |
chr2:14407228-14411283 | 20130731
Length = 221
Score = 150 bits (378), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 81/102 (79%)
Query: 28 GGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVL 87
GGG+ TA SLNKEFGP +KEHM+Y +DH EE+ KL KVKAQVSEVK +M+ENI+K +
Sbjct: 94 GGGKADTAIAKSLNKEFGPVMKEHMKYIIDHAEEIEKLLKVKAQVSEVKSIMLENIDKAI 153
Query: 88 DRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
DRGE + +L DKTE L QAQDFR GT++RRKMW QNMKIK
Sbjct: 154 DRGENLSVLSDKTETLRAQAQDFRKQGTQVRRKMWYQNMKIK 195
>Medtr1g111890.1 | synaptobrevin-like protein | HC |
chr1:50596698-50600474 | 20130731
Length = 238
Score = 145 bits (366), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 64/91 (70%), Positives = 81/91 (89%)
Query: 39 SLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVD 98
+L++EFGP LK HMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIEKVLDRGEKIELLVD
Sbjct: 124 NLDREFGPSLKGHMQYCLTHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVD 183
Query: 99 KTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
KTENL QA F+ G ++RRKMWLQN+++K
Sbjct: 184 KTENLQFQADSFQRQGRQLRRKMWLQNLQMK 214
>Medtr4g022470.1 | synaptobrevin-like protein | HC |
chr4:7491645-7489471 | 20130731
Length = 117
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/79 (81%), Positives = 69/79 (87%)
Query: 26 KGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEK 85
K GGGR TA SLNKEFGPKLKE +QYCV+HPEEV KLAKVKAQVSEVKGVMMENI+K
Sbjct: 38 KYGGGRATTATAKSLNKEFGPKLKEQIQYCVEHPEEVRKLAKVKAQVSEVKGVMMENIDK 97
Query: 86 VLDRGEKIELLVDKTENLH 104
V+DRGEKIE+LVDK ENL
Sbjct: 98 VIDRGEKIEVLVDKPENLR 116
>Medtr7g058640.2 | synaptobrevin-like protein | HC |
chr7:21214758-21216282 | 20130731
Length = 194
Score = 126 bits (316), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 59/88 (67%), Positives = 74/88 (84%)
Query: 26 KGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEK 85
+ GGG+ ATA SLNKEFGPKLKEHMQYCV+HPEEVSKLAKVKAQVS+V+ VM+ENI++
Sbjct: 92 RYGGGKAATATSKSLNKEFGPKLKEHMQYCVEHPEEVSKLAKVKAQVSQVQDVMLENIDQ 151
Query: 86 VLDRGEKIELLVDKTENLHHQAQDFRNS 113
VL+R KI++L+DKT+NL Q F ++
Sbjct: 152 VLNRQVKIDVLMDKTDNLRDQVLLFFHT 179
>Medtr4g052550.1 | synaptobrevin-like protein | HC |
chr4:19068456-19063628 | 20130731
Length = 220
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Query: 30 GRPATAAP-NSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLD 88
R A AP ++N EF L + M++ +P V L +V+ +V E++ +M++NIEK+L+
Sbjct: 92 SRVANYAPAYAMNDEFSRVLHQQMEFFSSNPS-VDALNRVRGEVGEIRTIMVDNIEKILE 150
Query: 89 RGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKI 128
RG++IELLVDKT + + FR ++RR +W++N K+
Sbjct: 151 RGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNFKL 190
>Medtr5g089370.1 | synaptobrevin-like protein | HC |
chr5:38844351-38848217 | 20130731
Length = 219
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 34 TAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIEKVLDRGEKI 93
TA ++N EF L + M+Y P ++ ++K ++S+V+ VM+ENI+KVLDRG+++
Sbjct: 97 TAEAYAMNDEFSRVLNQQMEYFSSDPN-ADRINRLKGEMSQVRNVMIENIDKVLDRGDRL 155
Query: 94 ELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKI 128
ELLVDK N+ FR + R +W +N+K+
Sbjct: 156 ELLVDKAANMQGNTFRFRKQARRFRSTVWWRNVKL 190
>Medtr4g115390.1 | synaptobrevin-like protein | HC |
chr4:47660120-47661511 | 20130731
Length = 224
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
Query: 25 AKGGGGRPATAAPNSLNKEFGPKLKEHMQYCVDHPEEVSKLAKVKAQVSEVKGVMMENIE 84
K G +A ++N EF L + M Y P +L ++K ++++V+ VM++NIE
Sbjct: 92 VKTYAGAILSAPAYTMNDEFSRILSQQMDYYSTDPNA-DRLNRLKGEMTQVRTVMLDNIE 150
Query: 85 KVLDRGEKIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKI 128
KVL+RG ++E+LV+KT ++ + F+ + + MW N+++
Sbjct: 151 KVLERGGRLEMLVEKTATMNTNSVRFKRQARRYKNNMWWSNVRL 194
>Medtr4g022550.1 | synaptobrevin 1 | HC | chr4:7526330-7524987 |
20130731
Length = 71
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 33/38 (86%)
Query: 92 KIELLVDKTENLHHQAQDFRNSGTKIRRKMWLQNMKIK 129
KIE+LVDKTENL QAQDFR GT++RRKMW QNMKIK
Sbjct: 10 KIEILVDKTENLRSQAQDFRQQGTQLRRKMWYQNMKIK 47