Miyakogusa Predicted Gene

Lj4g3v0654490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0654490.1 tr|Q1J1H3|Q1J1H3_DEIGD RbsK family ribokinase,
containing DNA-binding HTH domain OS=Deinococcus
geot,35.47,1e-18,Ribokinase-like,NULL; no description,NULL; seg,NULL;
PFKB_KINASES_1,Carbohydrate/puine kinase, PfkB,,CUFF.47798.1
         (183 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084100.2 | pfkB family carbohydrate kinase | HC | chr4:32...   295   2e-80
Medtr4g084100.1 | pfkB family carbohydrate kinase | HC | chr4:32...   294   3e-80

>Medtr4g084100.2 | pfkB family carbohydrate kinase | HC |
           chr4:32757954-32753434 | 20130731
          Length = 397

 Score =  295 bits (754), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 154/182 (84%)

Query: 2   QSHEAVIIGGMVLDIHAIPSIHANPGTTTPGKVYYFRGGVARNIAECMSKLGAKPFMISA 61
           +  EAVIIGGMVLDIHA PSI ANPGTTTPGKVYY +GGVARN+AECMSKLGAKP+MISA
Sbjct: 10  EDAEAVIIGGMVLDIHATPSIRANPGTTTPGKVYYVQGGVARNVAECMSKLGAKPYMISA 69

Query: 62  IGSDMAGNLLWEHWKSADLSTEGILKDKDIDTPVVCNIFDVNGXXXXXXXXXXXXXKCLT 121
           +G DMAGNLL EHWK+A LSTEGILK+KDI+TPVVCNIFDVNG             K LT
Sbjct: 70  LGFDMAGNLLLEHWKTAGLSTEGILKNKDIETPVVCNIFDVNGEVAAGVASVEALEKYLT 129

Query: 122 PDWILHFKHTLLSAPMLMVDANLSCTSLEASCKMAADTGCPVWFEPVSVTKSRRITSIAK 181
           PDWIL FK TLL AP+LMVDANLS  SLEASCKMAADTGCPVWFEPVSVTKS+RI S+AK
Sbjct: 130 PDWILCFKSTLLYAPVLMVDANLSGPSLEASCKMAADTGCPVWFEPVSVTKSQRIRSVAK 189

Query: 182 YV 183
           YV
Sbjct: 190 YV 191


>Medtr4g084100.1 | pfkB family carbohydrate kinase | HC |
           chr4:32757769-32753434 | 20130731
          Length = 421

 Score =  294 bits (753), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 143/182 (78%), Positives = 154/182 (84%)

Query: 2   QSHEAVIIGGMVLDIHAIPSIHANPGTTTPGKVYYFRGGVARNIAECMSKLGAKPFMISA 61
           +  EAVIIGGMVLDIHA PSI ANPGTTTPGKVYY +GGVARN+AECMSKLGAKP+MISA
Sbjct: 34  EDAEAVIIGGMVLDIHATPSIRANPGTTTPGKVYYVQGGVARNVAECMSKLGAKPYMISA 93

Query: 62  IGSDMAGNLLWEHWKSADLSTEGILKDKDIDTPVVCNIFDVNGXXXXXXXXXXXXXKCLT 121
           +G DMAGNLL EHWK+A LSTEGILK+KDI+TPVVCNIFDVNG             K LT
Sbjct: 94  LGFDMAGNLLLEHWKTAGLSTEGILKNKDIETPVVCNIFDVNGEVAAGVASVEALEKYLT 153

Query: 122 PDWILHFKHTLLSAPMLMVDANLSCTSLEASCKMAADTGCPVWFEPVSVTKSRRITSIAK 181
           PDWIL FK TLL AP+LMVDANLS  SLEASCKMAADTGCPVWFEPVSVTKS+RI S+AK
Sbjct: 154 PDWILCFKSTLLYAPVLMVDANLSGPSLEASCKMAADTGCPVWFEPVSVTKSQRIRSVAK 213

Query: 182 YV 183
           YV
Sbjct: 214 YV 215