Miyakogusa Predicted Gene

Lj4g3v0654480.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0654480.1 Non Characterized Hit- tr|I1KM83|I1KM83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9843
PE=,87.5,0,TIGR00149_YbjQ: secondary thiamine-phosphate
synth,Uncharacterised protein family UPF0047; UPF0047,U,CUFF.47800.1
         (175 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084120.1 | secondary thiamine-phosphate synthase enzyme |...   314   3e-86

>Medtr4g084120.1 | secondary thiamine-phosphate synthase enzyme | HC
           | chr4:32765825-32762405 | 20130731
          Length = 173

 Score =  314 bits (804), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 149/175 (85%), Positives = 159/175 (90%), Gaps = 2/175 (1%)

Query: 1   MQVSSFSIAQVPVGVKAQYPTVKKKESMAESTVPKWAQKTVTLPPLRRGCHLVTSKIAKE 60
           MQVSS  +A+ P+ VKAQ PT+K +ESMA  T PKWAQKT+ LPP +RGCHLVT KIAKE
Sbjct: 1   MQVSSLCVAKFPLSVKAQLPTLKTQESMA--TAPKWAQKTIALPPYKRGCHLVTPKIAKE 58

Query: 61  IEQDLSGFKCGLAHLFLQHTSASLTINENYDSDVRHDTETFLNRIVPEGPSAPWKHTIEG 120
           IEQDLSGFKCGLAHLFLQHTSASLTINENYD+DVR DTETFLNRIVPEGPSAPWKHT+EG
Sbjct: 59  IEQDLSGFKCGLAHLFLQHTSASLTINENYDTDVRDDTETFLNRIVPEGPSAPWKHTLEG 118

Query: 121 PDDMPAHIKSSMFGCTLTIPITNGKLNMGTWQGIWLCEHRDDPTSRRVVVTLNGI 175
            DDMPAHIKSSMFGC LTIPIT+GKLNMGTWQGIWLCEHRD PTSRRVVVTLNGI
Sbjct: 119 HDDMPAHIKSSMFGCALTIPITDGKLNMGTWQGIWLCEHRDHPTSRRVVVTLNGI 173