Miyakogusa Predicted Gene

Lj4g3v0654460.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0654460.1 Non Characterized Hit- tr|I3S7G1|I3S7G1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0,GCV_H,Glycine cleavage H-protein; Single hybrid
motif,Single hybrid motif; GcvH,Glycine cleavage H-p,CUFF.47797.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084110.1 | glycine cleavage system H protein | HC | chr4:...   279   9e-76
Medtr5g014260.1 | glycine cleavage system H protein | HC | chr5:...   197   3e-51
Medtr5g014260.2 | glycine cleavage system H protein | HC | chr5:...   137   5e-33

>Medtr4g084110.1 | glycine cleavage system H protein | HC |
           chr4:32758044-32760326 | 20130731
          Length = 155

 Score =  279 bits (713), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 132/155 (85%), Positives = 146/155 (94%)

Query: 1   MACRQLWASRAASYLRISVFNRAFSSVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLG 60
           MACRQLWASRAASYLRIS+F+R+FS+V+ +LKYADSHEWVKVDG SAT+GITDHAQDHLG
Sbjct: 1   MACRQLWASRAASYLRISLFHRSFSNVLNNLKYADSHEWVKVDGKSATIGITDHAQDHLG 60

Query: 61  DVVYVELPEVGTEVTQGGGFGAVESVKATSDINSPVSGKVVEVNEELNSSPAKVNSSPYE 120
           DVVYVELPEVGT VTQG GFGAVESVKATSDINSPVSGKV+EVNEEL++SPA VNSSPYE
Sbjct: 61  DVVYVELPEVGTAVTQGDGFGAVESVKATSDINSPVSGKVIEVNEELSNSPALVNSSPYE 120

Query: 121 DGWIIKVELSDSSELSNLMDSEQYSKFCEEEDSKH 155
           +GWIIKVE+SDS EL  LMDSE+Y+KFCEEEDS H
Sbjct: 121 NGWIIKVEMSDSGELDKLMDSEKYTKFCEEEDSSH 155


>Medtr5g014260.1 | glycine cleavage system H protein | HC |
           chr5:4761875-4760173 | 20130731
          Length = 166

 Score =  197 bits (501), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 89/136 (65%), Positives = 115/136 (84%)

Query: 20  FNRAFSSVVKDLKYADSHEWVKVDGNSATVGITDHAQDHLGDVVYVELPEVGTEVTQGGG 79
            +R FS+V+  LKYA SHEWVK +G+ AT+GITDHAQDHLG+VV+VELPE G  VT+G G
Sbjct: 31  ISRCFSTVLDGLKYASSHEWVKHEGSVATIGITDHAQDHLGEVVFVELPEPGGSVTKGNG 90

Query: 80  FGAVESVKATSDINSPVSGKVVEVNEELNSSPAKVNSSPYEDGWIIKVELSDSSELSNLM 139
           FGAVESVKATSD+NSP+SG++VEVN++L   P  +NSSPYEDGW+IK++ SD SEL +L+
Sbjct: 91  FGAVESVKATSDVNSPISGEIVEVNDKLTGKPGLINSSPYEDGWMIKIKPSDPSELESLL 150

Query: 140 DSEQYSKFCEEEDSKH 155
            +++Y+KFCEEED+ H
Sbjct: 151 GAKEYTKFCEEEDAAH 166


>Medtr5g014260.2 | glycine cleavage system H protein | HC |
           chr5:4761867-4760173 | 20130731
          Length = 145

 Score =  137 bits (344), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/126 (57%), Positives = 92/126 (73%), Gaps = 13/126 (10%)

Query: 1   MACRQLWASRAASYLRISV------------FNRAFSSVVKDLKYADSHEWVKVDGNSAT 48
           MA R +WAS  A+ L++S              +R FS+V+  LKYA SHEWVK +G+ AT
Sbjct: 1   MALR-MWASSTANALKLSSSSSRLHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGSVAT 59

Query: 49  VGITDHAQDHLGDVVYVELPEVGTEVTQGGGFGAVESVKATSDINSPVSGKVVEVNEELN 108
           +GITDHAQDHLG+VV+VELPE G  VT+G GFGAVESVKATSD+NSP+SG++VEVN++L 
Sbjct: 60  IGITDHAQDHLGEVVFVELPEPGGSVTKGNGFGAVESVKATSDVNSPISGEIVEVNDKLT 119

Query: 109 SSPAKV 114
             P  V
Sbjct: 120 GKPGLV 125