Miyakogusa Predicted Gene

Lj4g3v0644110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0644110.1 tr|J9I967|J9I967_9SPIT Calcyclin-binding protein
OS=Oxytricha trifallax PE=4 SV=1,36.97,4e-19,SUBFAMILY NOT NAMED,NULL;
CALICYLIN BINDING PROTEIN,NULL; no description,NULL; SGS,SGS;
CS,CS-like d,CUFF.47784.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g084250.1 | calcyclin-binding protein | HC | chr4:32832437...   385   e-107
Medtr4g084250.2 | calcyclin-binding protein | HC | chr4:32832413...   281   3e-76
Medtr5g009930.1 | SGT1-2 | HC | chr5:2551378-2546960 | 20130731        49   4e-06

>Medtr4g084250.1 | calcyclin-binding protein | HC |
           chr4:32832437-32830275 | 20130731
          Length = 221

 Score =  385 bits (988), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/221 (85%), Positives = 205/221 (92%), Gaps = 3/221 (1%)

Query: 1   MAEEFALDLDELRHLHSIAKRPRTLSLLSSEIRNLEKLSSE-SSSARAAQIP--APIATG 57
           MAEEFALDL+ELRHLH IAKRPR LSLL+SEIRNLEKLSSE +S+ARA+QIP  APIATG
Sbjct: 1   MAEEFALDLEELRHLHEIAKRPRILSLLTSEIRNLEKLSSEATSTARASQIPIPAPIATG 60

Query: 58  TKVSPTVALSYSPLASFSWDQDNEKVKIYVSLEGVDESKIASELKPSSLDLKFHDIQGKN 117
           T VSP+ A SYSPLASFSWDQDN+KVKIYVSLEGVDE+KI SE KP+S D+KFHDIQGKN
Sbjct: 61  TTVSPSPARSYSPLASFSWDQDNDKVKIYVSLEGVDETKIESEFKPNSFDVKFHDIQGKN 120

Query: 118 YRFAISKLHKEIVPEKCKVLVKPTRVIITLVKASKANWLDLHFKEEKLKPNLDKEKDPMA 177
           YRFA+ KLHK+IVPE CK+LVKP RVIITLVKASKANWLDLHFKE+KLKP +DKEKDPMA
Sbjct: 121 YRFAVVKLHKDIVPENCKILVKPKRVIITLVKASKANWLDLHFKEDKLKPAMDKEKDPMA 180

Query: 178 GIMDLMKNMYEEGDEEMKKTIAKAWTDARSGKAADPLSSYR 218
           GIMDLMKNMYE+GDEEMKKTIAKAWTDAR+GK ADPLSSYR
Sbjct: 181 GIMDLMKNMYEDGDEEMKKTIAKAWTDARTGKTADPLSSYR 221


>Medtr4g084250.2 | calcyclin-binding protein | HC |
           chr4:32832413-32830492 | 20130731
          Length = 171

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 139/168 (82%), Positives = 154/168 (91%), Gaps = 3/168 (1%)

Query: 1   MAEEFALDLDELRHLHSIAKRPRTLSLLSSEIRNLEKLSSE-SSSARAAQIP--APIATG 57
           MAEEFALDL+ELRHLH IAKRPR LSLL+SEIRNLEKLSSE +S+ARA+QIP  APIATG
Sbjct: 1   MAEEFALDLEELRHLHEIAKRPRILSLLTSEIRNLEKLSSEATSTARASQIPIPAPIATG 60

Query: 58  TKVSPTVALSYSPLASFSWDQDNEKVKIYVSLEGVDESKIASELKPSSLDLKFHDIQGKN 117
           T VSP+ A SYSPLASFSWDQDN+KVKIYVSLEGVDE+KI SE KP+S D+KFHDIQGKN
Sbjct: 61  TTVSPSPARSYSPLASFSWDQDNDKVKIYVSLEGVDETKIESEFKPNSFDVKFHDIQGKN 120

Query: 118 YRFAISKLHKEIVPEKCKVLVKPTRVIITLVKASKANWLDLHFKEEKL 165
           YRFA+ KLHK+IVPE CK+LVKP RVIITLVKASKANWLDLHFKE+K+
Sbjct: 121 YRFAVVKLHKDIVPENCKILVKPKRVIITLVKASKANWLDLHFKEDKV 168


>Medtr5g009930.1 | SGT1-2 | HC | chr5:2551378-2546960 | 20130731
          Length = 374

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 82/193 (42%), Gaps = 40/193 (20%)

Query: 44  SARAAQIPAPIATGTKVSPTVALSYSPLASFSWDQDNEKVKIYVSLEGVDESKIASELKP 103
           +++  Q  +P +    V+P       P     + Q  E+V + +  +G+    +  +   
Sbjct: 153 TSKEPQRDSPASQTNAVAPV-----RPKYRHEYYQKPEEVVVTIFAKGIPAENVVVDFGE 207

Query: 104 SSLDLKFHDIQGKNYRFAISKLHKEIVPEKCKVLVKPTRVIITLVKASKANWLDLHFKEE 163
             L +   D+ G++      +L  +I+P+KCKV+V  T++ I L KA   NW  L + ++
Sbjct: 208 QILSVTI-DVPGQDAYHYQPRLFGKIIPDKCKVVVLSTKIEIRLAKAEAVNWTSLEYSKD 266

Query: 164 KLK-----PNLDKEK-----------------------------DPMAGIMDLMKNMYEE 189
            L      P++  E+                             D  A +  L +++Y+ 
Sbjct: 267 VLPQKIIVPSVQSERPAYPSSKSRTKDWDKLEAEVKKEEKEEKLDGDAALNKLFRDIYQN 326

Query: 190 GDEEMKKTIAKAW 202
            DE+M++ ++K++
Sbjct: 327 ADEDMRRAMSKSF 339