Miyakogusa Predicted Gene

Lj4g3v0643850.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0643850.1 Non Characterized Hit- tr|I1ND97|I1ND97_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22781
PE,84.47,0,seg,NULL; Tim17,Mitochondrial inner membrane translocase
subunit Tim17/Tim22/Tim23/peroxisomal prote,CUFF.47759.1
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g088745.3 | import inner membrane translocase subunit TIM2...   260   9e-70
Medtr6g088745.2 | import inner membrane translocase subunit TIM2...   260   9e-70
Medtr6g088745.1 | import inner membrane translocase subunit TIM2...   260   9e-70

>Medtr6g088745.3 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33881240 | 20130731
          Length = 210

 Score =  260 bits (664), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 144/224 (64%), Positives = 154/224 (68%), Gaps = 21/224 (9%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKG R  GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R+GGSFAVWGGLFS+FDCTMVY+RQKEDPWNSI AGAATGGFL+MRQGL AS R+AAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGI LNKFLSAQQ                                 + +  G
Sbjct: 121 VLLALIEGAGIALNKFLSAQQ-------------PLPMMIEDMPPENSNSNANSEENKGG 167

Query: 181 GGW-------FGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
             W       FG+K+E   GG GGSE KVLESFDAPPVPNFEYK
Sbjct: 168 KPWFGGFGGIFGQKEEEKIGG-GGSEVKVLESFDAPPVPNFEYK 210


>Medtr6g088745.2 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33881252 | 20130731
          Length = 210

 Score =  260 bits (664), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 144/224 (64%), Positives = 154/224 (68%), Gaps = 21/224 (9%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKG R  GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R+GGSFAVWGGLFS+FDCTMVY+RQKEDPWNSI AGAATGGFL+MRQGL AS R+AAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGI LNKFLSAQQ                                 + +  G
Sbjct: 121 VLLALIEGAGIALNKFLSAQQ-------------PLPMMIEDMPPENSNSNANSEENKGG 167

Query: 181 GGW-------FGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
             W       FG+K+E   GG GGSE KVLESFDAPPVPNFEYK
Sbjct: 168 KPWFGGFGGIFGQKEEEKIGG-GGSEVKVLESFDAPPVPNFEYK 210


>Medtr6g088745.1 | import inner membrane translocase subunit TIM22 |
           HC | chr6:33878224-33879549 | 20130731
          Length = 210

 Score =  260 bits (664), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 144/224 (64%), Positives = 154/224 (68%), Gaps = 21/224 (9%)

Query: 1   MGTPETSREPCPDRILDDIXXXXXXXXXXXXXFHFLKGLYNSPKGDRLLGASQAVRLNAP 60
           MGTPETSREPCPDRILDDI             FHFLKGLYNSPKG R  GA+QAVRLNAP
Sbjct: 1   MGTPETSREPCPDRILDDIGGAFGMGAVGGSAFHFLKGLYNSPKGARFTGATQAVRLNAP 60

Query: 61  RVGGSFAVWGGLFSSFDCTMVYLRQKEDPWNSIFAGAATGGFLSMRQGLTASTRAAAFGG 120
           R+GGSFAVWGGLFS+FDCTMVY+RQKEDPWNSI AGAATGGFL+MRQGL AS R+AAFGG
Sbjct: 61  RIGGSFAVWGGLFSTFDCTMVYVRQKEDPWNSIVAGAATGGFLAMRQGLAASARSAAFGG 120

Query: 121 VLLALIEGAGIMLNKFLSAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNSWFG 180
           VLLALIEGAGI LNKFLSAQQ                                 + +  G
Sbjct: 121 VLLALIEGAGIALNKFLSAQQ-------------PLPMMIEDMPPENSNSNANSEENKGG 167

Query: 181 GGW-------FGKKDEVAAGGDGGSETKVLESFDAPPVPNFEYK 217
             W       FG+K+E   GG GGSE KVLESFDAPPVPNFEYK
Sbjct: 168 KPWFGGFGGIFGQKEEEKIGG-GGSEVKVLESFDAPPVPNFEYK 210