Miyakogusa Predicted Gene

Lj4g3v0620370.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0620370.1 Non Characterized Hit- tr|D7E0U3|D7E0U3_NOSA0
Putative signal transduction protein with CBS domains
,34.9,5e-17,Domain in cystathionine beta-synthase and ot,Cystathionine
beta-synthase, core; CBS,Cystathionine be,CUFF.47678.1
         (238 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g485640.1 | UDP-glucosyltransferase 73B2 | HC | chr4:33406...   324   4e-89
Medtr5g016770.1 | cystathionine beta-synthase (CBS) family prote...   262   2e-70
Medtr5g016770.2 | cystathionine beta-synthase (CBS) family prote...   205   3e-53

>Medtr4g485640.1 | UDP-glucosyltransferase 73B2 | HC |
           chr4:33406879-33401462 | 20130731
          Length = 671

 Score =  324 bits (831), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 161/202 (79%), Positives = 182/202 (90%), Gaps = 4/202 (1%)

Query: 33  FPQTHSPVPSSAVPKRRRSSHSARFRLASGPSATVDSVPRENGTYTVADFMTKKQNLHVA 92
            P  HS +PSS +PKR R + SARF + S  S TV+SVPR NGTYTV+DFMTKK NLHV 
Sbjct: 20  LPHCHSLLPSSVLPKRHRFAQSARFSVVS--SQTVNSVPRANGTYTVSDFMTKKHNLHVV 77

Query: 93  KTTTTVDEALEALVKNRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVN 152
           KTTT+VDEALEALVKNRISGLPV+D++WNLVGVVSDYDLLAID+ISG +  D++LFPDV+
Sbjct: 78  KTTTSVDEALEALVKNRISGLPVIDEEWNLVGVVSDYDLLAIDTISGSS--DASLFPDVD 135

Query: 153 SSWKTFNEIQKLLSKTNGQVVGDLMTPTPLVVQESTNLEDAARLLLETKYRRLPVVDRDG 212
           S+WKTFNEIQKLLSKTNG+VVGDLMTP+PLVV EST+LEDAARLLLETKYRRLPVVD+DG
Sbjct: 136 STWKTFNEIQKLLSKTNGKVVGDLMTPSPLVVHESTSLEDAARLLLETKYRRLPVVDKDG 195

Query: 213 KLVGLITRGNIVKAALLSKRAG 234
           KLVGLITRGNIVKAALLSKR+G
Sbjct: 196 KLVGLITRGNIVKAALLSKRSG 217


>Medtr5g016770.1 | cystathionine beta-synthase (CBS) family protein
           | HC | chr5:6036924-6031676 | 20130731
          Length = 224

 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 128/197 (64%), Positives = 162/197 (82%), Gaps = 5/197 (2%)

Query: 41  PSSAVPKR--RRSSHSARFR---LASGPSATVDSVPRENGTYTVADFMTKKQNLHVAKTT 95
           P +AV  R    S+H ++ R   L +  + T +SVP +NG YTV DFMTKK  LH  K T
Sbjct: 22  PRAAVAFRCFHTSAHFSKLRGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPT 81

Query: 96  TTVDEALEALVKNRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVNSSW 155
           TTVDEAL++LV++RI+G PV+DD+W LVGVVSDYDLLA+DSISG  Q D++LFPDV+S+W
Sbjct: 82  TTVDEALDSLVEHRITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTW 141

Query: 156 KTFNEIQKLLSKTNGQVVGDLMTPTPLVVQESTNLEDAARLLLETKYRRLPVVDRDGKLV 215
           KTFNE+Q+LLSKTNG+V+G+LMT  P+VV+E+TNLEDAARLLLETK+RRLPVVD +G+LV
Sbjct: 142 KTFNEVQRLLSKTNGKVIGELMTTAPMVVRETTNLEDAARLLLETKFRRLPVVDAEGRLV 201

Query: 216 GLITRGNIVKAALLSKR 232
           G+ITRGN+V+AAL  KR
Sbjct: 202 GIITRGNVVRAALQMKR 218


>Medtr5g016770.2 | cystathionine beta-synthase (CBS) family protein
           | HC | chr5:6036924-6031719 | 20130731
          Length = 192

 Score =  205 bits (522), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/162 (61%), Positives = 128/162 (79%), Gaps = 5/162 (3%)

Query: 41  PSSAVPKR--RRSSHSARFR---LASGPSATVDSVPRENGTYTVADFMTKKQNLHVAKTT 95
           P +AV  R    S+H ++ R   L +  + T +SVP +NG YTV DFMTKK  LH  K T
Sbjct: 22  PRAAVAFRCFHTSAHFSKLRGSPLFAANTLTANSVPPKNGVYTVGDFMTKKDELHTVKPT 81

Query: 96  TTVDEALEALVKNRISGLPVVDDDWNLVGVVSDYDLLAIDSISGGNQNDSNLFPDVNSSW 155
           TTVDEAL++LV++RI+G PV+DD+W LVGVVSDYDLLA+DSISG  Q D++LFPDV+S+W
Sbjct: 82  TTVDEALDSLVEHRITGFPVIDDNWKLVGVVSDYDLLALDSISGQGQTDNSLFPDVDSTW 141

Query: 156 KTFNEIQKLLSKTNGQVVGDLMTPTPLVVQESTNLEDAARLL 197
           KTFNE+Q+LLSKTNG+V+G+LMT  P+VV+E+TNLEDAAR  
Sbjct: 142 KTFNEVQRLLSKTNGKVIGELMTTAPMVVRETTNLEDAARFF 183