Miyakogusa Predicted Gene

Lj4g3v0619970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0619970.1 Non Characterized Hit- tr|Q9SZQ1|Q9SZQ1_ARATH
Putative uncharacterized protein AT4g29780
OS=Arabidop,25.68,2e-18,seg,NULL; DDE_4,NULL;
UNCHARACTERIZED,Harbinger transposase-derived nuclease,CUFF.47644.1
         (414 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g077960.1 | hypothetical protein | LC | chr1:34849666-3484...    84   2e-16

>Medtr1g077960.1 | hypothetical protein | LC |
           chr1:34849666-34849947 | 20130731
          Length = 93

 Score = 84.3 bits (207), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/98 (47%), Positives = 58/98 (59%), Gaps = 19/98 (19%)

Query: 74  ENQNPPPRSPDWFRASFLMTSSTFEWLSGLLEPLLDCRDPADLLPLNLSSGVRLGIGLFR 133
           E Q PP +  D  R +  +TSS  E                 + PLNL++ V LGIGLF 
Sbjct: 15  EEQAPPLQIRDVIRTA--VTSSVQE-----------------VFPLNLTADVLLGIGLFC 55

Query: 134 LATGSDYADISDRFGVSVPVARFCVKQLCRVLCTNFRF 171
           LA GSDY  I+++F + V VA+ CVKQLCRVLCTNFRF
Sbjct: 56  LANGSDYQQIANQFNILVSVAKLCVKQLCRVLCTNFRF 93