Miyakogusa Predicted Gene
- Lj4g3v0575720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0575720.1 Non Characterized Hit- tr|B9R7F1|B9R7F1_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,52.46,0.00000000004,seg,NULL; DUF829,Protein of unknown function
DUF829, TMEM53; UNCHARACTERIZED,Protein of unknown func,CUFF.47623.1
(418 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g086420.1 | DUF829 domain protein | HC | chr4:33876232-338... 622 e-178
Medtr3g101490.2 | DUF829 domain protein | HC | chr3:46712213-467... 369 e-102
Medtr3g101490.1 | DUF829 domain protein | HC | chr3:46712329-467... 369 e-102
Medtr1g114600.1 | alpha/beta-hydrolase superfamily protein | HC ... 50 6e-06
>Medtr4g086420.1 | DUF829 domain protein | HC |
chr4:33876232-33871742 | 20130731
Length = 410
Score = 622 bits (1605), Expect = e-178, Method: Compositional matrix adjust.
Identities = 308/400 (77%), Positives = 338/400 (84%), Gaps = 4/400 (1%)
Query: 21 NIYWGRKHATDFRGIVVIFAWVSVPQTLLQDFVNLYSSLGWNSLVCYAHYLSAFRDESTV 80
NIYWGRKH TDF+GIVVIFAWVSVPQ LL++FV+LYSSLGWNSLVCYAHYLSAF +ES V
Sbjct: 13 NIYWGRKHDTDFKGIVVIFAWVSVPQNLLREFVDLYSSLGWNSLVCYAHYLSAFNEESAV 72
Query: 81 PLAFCVVDELIEELKTKSCPVVFAAFSAGSKACLYKVLQLIDGRCETPHCLHNYHLLRNC 140
PLAF V DELIE L+T+ CPVVFA+FSAGSKACLYK+ QL +GRC P LH+ L RNC
Sbjct: 73 PLAFYVFDELIEVLRTRPCPVVFASFSAGSKACLYKLFQLSEGRCTAPLNLHDCQLFRNC 132
Query: 141 VSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXXXXXXXXXXXXXXXXXDALYLTSFESQA 200
VSGHIYDSGPLDVTSDFGFRF+LHPS+AKVP DALYLT FESQ+
Sbjct: 133 VSGHIYDSGPLDVTSDFGFRFSLHPSIAKVPGPSKLVSWVAKSVASGLDALYLTRFESQS 192
Query: 201 AEHWQALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLVNWSNSPHVGH 260
A+HWQALYSSVNFGAPFLILCSEND+LVR+QS+YDFAQRLRNL+ADVNLVN +S HVGH
Sbjct: 193 ADHWQALYSSVNFGAPFLILCSENDELVRYQSIYDFAQRLRNLNADVNLVNLRSSSHVGH 252
Query: 261 YKHHPIQYRAAVSQFLEKSASIYSQKVKLEQERIGTDGMHDEISELICDLQKVAINSNQS 320
Y+HHPIQYRAAVS LEK+ S YS+KV LEQER G DGMHDEISELICDLQKVAINSN+S
Sbjct: 253 YEHHPIQYRAAVSHLLEKAVSTYSRKVILEQERTGIDGMHDEISELICDLQKVAINSNES 312
Query: 321 LRRVAVGPTDHFFLPSSAGQ-YKDRESGTPQEEQKEKPVCVPSFPSISANSVLGQFLFDV 379
RRVAVGP+DHFFLPSSAG DRES P++EQKE+PVC PSFPSISA+SVLGQFLFDV
Sbjct: 313 FRRVAVGPSDHFFLPSSAGHNNNDRESVIPRDEQKEEPVCAPSFPSISAHSVLGQFLFDV 372
Query: 380 CVPKNVDGW-DVKFSGNRLCASASRHSPLRGIKRIGRSRL 418
CVPKNV+GW DVKF GNR SR SP RGIKRIGRSRL
Sbjct: 373 CVPKNVEGWDDVKFCGNR--NGRSRVSPFRGIKRIGRSRL 410
>Medtr3g101490.2 | DUF829 domain protein | HC |
chr3:46712213-46716793 | 20130731
Length = 406
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/402 (46%), Positives = 266/402 (66%), Gaps = 10/402 (2%)
Query: 23 YWGRKHA--TDFRGIVVIFAWVSVPQTLLQDFVNLYSSLGWNSLVCYAHYLSAF-RDEST 79
YWGR+ GIVV+FAW+S + L +V+LYSSLGWNSL+C++ +L+ F D++T
Sbjct: 9 YWGRRKVDCEKANGIVVVFAWMSSEEKHLMRYVDLYSSLGWNSLICHSQFLNMFFPDKAT 68
Query: 80 VPLAFCVVDELIEELKTKSCPVVFAAFSAGSKACLYKVLQLIDGRCETPHCLHNYHLLRN 139
+P A +++EL+E LK + CP+VFA+FS G+KAC+ KVLQ+I G CET H + +Y L+R+
Sbjct: 69 IP-AVDILNELVEVLKIRRCPIVFASFSGGAKACMLKVLQIIGGECET-HNMDDYQLVRD 126
Query: 140 CVSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXXXXXXXXXXXXXXXXXDALYLTSFESQ 199
C+SG+IYDS P+D TSD G RF LHPS+ KV D+L+L FESQ
Sbjct: 127 CISGYIYDSSPVDFTSDLGVRFVLHPSVLKVSHPPRFASWIANGIASGLDSLFLNRFESQ 186
Query: 200 AAEHWQALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLVNWSNSPHVG 259
A++W+ LYS+ + P+LI CSENDDL + V +F RL++L DV LV WS+SPHVG
Sbjct: 187 RADYWRTLYSTTSMQVPYLIFCSENDDLAPFEVVSNFFHRLKDLGGDVKLVKWSSSPHVG 246
Query: 260 HYKHHPIQYRAAVSQFLEKSASIYSQK-VKLEQERIGTDGMHDEISELICDLQKVAINSN 318
H++HHP +Y AA+++ L K+ +IY K + E E++G +G DEI++ +L+K A S
Sbjct: 247 HFRHHPDEYEAAITEILGKAVAIYRHKNRRFEDEKLGIEGTRDEITDPFSELRKAATTST 306
Query: 319 QSLRRVAVGPTDHFFLPSSAGQYKDRESGTPQEEQKEKPVCVPSFPSISANSVLGQFLFD 378
S + AV P+++ PSS Y D++ G+ +E+K + +P+ PSI+AN VLGQ LFD
Sbjct: 307 -SFQGFAVAPSEN-LSPSSMEYYDDKDVGSVADERKGSFIHLPTRPSINANGVLGQILFD 364
Query: 379 VCVPKNVDGWDVKFSGNR--LCASASRHSPLRGIKRIGRSRL 418
VCVPK V+ WDV+ + L + RH+P IK I RSRL
Sbjct: 365 VCVPKTVEDWDVRSNSKNAGLLSGTRRHAPFNPIKCIRRSRL 406
>Medtr3g101490.1 | DUF829 domain protein | HC |
chr3:46712329-46716698 | 20130731
Length = 406
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/402 (46%), Positives = 266/402 (66%), Gaps = 10/402 (2%)
Query: 23 YWGRKHA--TDFRGIVVIFAWVSVPQTLLQDFVNLYSSLGWNSLVCYAHYLSAF-RDEST 79
YWGR+ GIVV+FAW+S + L +V+LYSSLGWNSL+C++ +L+ F D++T
Sbjct: 9 YWGRRKVDCEKANGIVVVFAWMSSEEKHLMRYVDLYSSLGWNSLICHSQFLNMFFPDKAT 68
Query: 80 VPLAFCVVDELIEELKTKSCPVVFAAFSAGSKACLYKVLQLIDGRCETPHCLHNYHLLRN 139
+P A +++EL+E LK + CP+VFA+FS G+KAC+ KVLQ+I G CET H + +Y L+R+
Sbjct: 69 IP-AVDILNELVEVLKIRRCPIVFASFSGGAKACMLKVLQIIGGECET-HNMDDYQLVRD 126
Query: 140 CVSGHIYDSGPLDVTSDFGFRFALHPSMAKVPXXXXXXXXXXXXXXXXXDALYLTSFESQ 199
C+SG+IYDS P+D TSD G RF LHPS+ KV D+L+L FESQ
Sbjct: 127 CISGYIYDSSPVDFTSDLGVRFVLHPSVLKVSHPPRFASWIANGIASGLDSLFLNRFESQ 186
Query: 200 AAEHWQALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLVNWSNSPHVG 259
A++W+ LYS+ + P+LI CSENDDL + V +F RL++L DV LV WS+SPHVG
Sbjct: 187 RADYWRTLYSTTSMQVPYLIFCSENDDLAPFEVVSNFFHRLKDLGGDVKLVKWSSSPHVG 246
Query: 260 HYKHHPIQYRAAVSQFLEKSASIYSQK-VKLEQERIGTDGMHDEISELICDLQKVAINSN 318
H++HHP +Y AA+++ L K+ +IY K + E E++G +G DEI++ +L+K A S
Sbjct: 247 HFRHHPDEYEAAITEILGKAVAIYRHKNRRFEDEKLGIEGTRDEITDPFSELRKAATTST 306
Query: 319 QSLRRVAVGPTDHFFLPSSAGQYKDRESGTPQEEQKEKPVCVPSFPSISANSVLGQFLFD 378
S + AV P+++ PSS Y D++ G+ +E+K + +P+ PSI+AN VLGQ LFD
Sbjct: 307 -SFQGFAVAPSEN-LSPSSMEYYDDKDVGSVADERKGSFIHLPTRPSINANGVLGQILFD 364
Query: 379 VCVPKNVDGWDVKFSGNR--LCASASRHSPLRGIKRIGRSRL 418
VCVPK V+ WDV+ + L + RH+P IK I RSRL
Sbjct: 365 VCVPKTVEDWDVRSNSKNAGLLSGTRRHAPFNPIKCIRRSRL 406
>Medtr1g114600.1 | alpha/beta-hydrolase superfamily protein | HC |
chr1:51733133-51736623 | 20130731
Length = 435
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 206 ALYSSVNFGAPFLILCSENDDLVRHQSVYDFAQRLRNLSADVNLVNWSNSPHVGHYKHHP 265
++ S+ G P L + S D ++ SV F R DV N+ +SPHV H+++ P
Sbjct: 354 SMLSTKQPGCPQLYMYSSADRVIPADSVESFVNAQRKAGHDVRACNFVSSPHVDHFRNDP 413
Query: 266 IQYRAAVSQFLEK 278
I Y + +SQFLE+
Sbjct: 414 ILYTSQLSQFLEE 426