Miyakogusa Predicted Gene

Lj4g3v0575700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0575700.1 Non Characterized Hit- tr|F6HQC4|F6HQC4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.07,4e-19,seg,NULL; CDI,Cyclin-dependent kinase inhibitor; no
description,NULL,CUFF.47620.1
         (192 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086450.1 | cyclin-dependent kinase inhibitor family prote...   124   4e-29
Medtr5g017600.1 | cyclin-dependent kinase inhibitor family prote...    74   7e-14
Medtr7g057920.1 | cyclin-dependent kinase inhibitor family prote...    64   1e-10
Medtr7g058390.1 | cyclin-dependent kinase inhibitor family prote...    61   7e-10
Medtr1g072860.1 | cyclin-dependent kinase inhibitor family prote...    51   6e-07

>Medtr4g086450.1 | cyclin-dependent kinase inhibitor family protein
           | HC | chr4:33887900-33886521 | 20130731
          Length = 153

 Score =  124 bits (312), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/197 (43%), Positives = 100/197 (50%), Gaps = 49/197 (24%)

Query: 1   MSDCKRSASTIAAMEEDYVSSSSGPTISKKRKTTPSNSHCFLIEFPHISPETSLNSAGTV 60
           MSDCKRS+ TI A         +G +ISKKRK T S       E  H  P +   +A  +
Sbjct: 1   MSDCKRSSPTIIA---------NGTSISKKRKITASQFQS--SEMKHQLPNSLAEAAENI 49

Query: 61  VSG---EXXXXXXXXXXXXXXXHVADTGE--SVKTAPLDLEVQTKGFETVDSTNHNLKSF 115
           +S    E                V +T +   + T PLD E++TK FETVD TNHNLKSF
Sbjct: 50  LSSASDEFRSDHTPLLTCCSSGKVTETNDVKELDTTPLDPELKTKCFETVDKTNHNLKSF 109

Query: 116 SLLREFSGDSEELVFPEKYSAAVSELRKMKKTPPMAEIEEFFATTERNEQKRFAEKYNFD 175
              RE                              AEI+EFFA  ER E+KRFAEKYNFD
Sbjct: 110 ---RE------------------------------AEIDEFFANFEREERKRFAEKYNFD 136

Query: 176 IVRDMPLEGRYQWVRLH 192
           IVRDMPLEGRY+WVRLH
Sbjct: 137 IVRDMPLEGRYEWVRLH 153


>Medtr5g017600.1 | cyclin-dependent kinase inhibitor family protein
           | HC | chr5:6445067-6442776 | 20130731
          Length = 183

 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 8   ASTIAAMEEDYVSSSSGPTISKKRKTTPSNSHCFLIEFPHISPETSLNSAGTVVSGEXXX 67
           A    AMEE   +++S P  SK+RK    N+  F        PE    S+G +   E   
Sbjct: 14  AQAALAMEE---ATTSSPKTSKRRKI---NNRKFSTPTILPQPEKEEKSSGDISEEEFPA 67

Query: 68  XXXXXXXXXXXXHVADTGESVKTAPLDLEVQTKGFETVDSTNHNLKSFSLLREFSGDSEE 127
                        V    E +K+  LDLEV++   ET  + N++ + F   RE S  S  
Sbjct: 68  SCCSSNG-----SVQLDEERIKS--LDLEVESAQVET-STCNYSEEEFQR-REMS-RSRS 117

Query: 128 LVFPEKYSAAVSELRKMKKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQ 187
             F    + +   +   K  P   E+EEFF+  E+N QK+F EKYN+DIV+D+PLEGRY+
Sbjct: 118 NEFESMETNSNRPISSPKNMPTGFELEEFFSAAEKNIQKKFQEKYNYDIVKDVPLEGRYE 177

Query: 188 WVRLH 192
           WV+L 
Sbjct: 178 WVQLK 182


>Medtr7g057920.1 | cyclin-dependent kinase inhibitor family protein
           | HC | chr7:20963132-20959722 | 20130731
          Length = 209

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query: 145 KKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWV 189
           + TP   E++EFFA  E+ +Q  F EKYNFD+V D+PL GRY+WV
Sbjct: 161 RNTPTTNEVDEFFALAEKQQQALFMEKYNFDVVNDVPLPGRYEWV 205


>Medtr7g058390.1 | cyclin-dependent kinase inhibitor family protein
           | HC | chr7:21014517-21011274 | 20130731
          Length = 208

 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 32/45 (71%)

Query: 145 KKTPPMAEIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWV 189
           +  P   E++EFFA  E+ +Q  F EKYNFD+V D+PL GRY+WV
Sbjct: 160 RNIPTSYEMDEFFALAEKQQQALFMEKYNFDVVNDVPLPGRYEWV 204


>Medtr1g072860.1 | cyclin-dependent kinase inhibitor family protein
           | HC | chr1:32372942-32370733 | 20130731
          Length = 222

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 20/40 (50%), Positives = 28/40 (70%)

Query: 152 EIEEFFATTERNEQKRFAEKYNFDIVRDMPLEGRYQWVRL 191
           E EE+FA  E  +Q+ F EKYNFD V + PL GR++W ++
Sbjct: 181 EFEEYFAKHEAEQQREFMEKYNFDPVTEQPLPGRFEWEKV 220