Miyakogusa Predicted Gene

Lj4g3v0536640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0536640.1 Non Characterized Hit- tr|D8R372|D8R372_SELML
Putative uncharacterized protein OS=Selaginella moelle,30.9,4e-18,
,CUFF.47576.1
         (235 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087160.1 | maternal effect embryo arrest protein, putativ...   258   4e-69
Medtr4g087160.2 | maternal effect embryo arrest protein, putativ...   239   1e-63

>Medtr4g087160.1 | maternal effect embryo arrest protein, putative |
           HC | chr4:34149676-34147846 | 20130731
          Length = 196

 Score =  258 bits (658), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 135/201 (67%), Positives = 156/201 (77%), Gaps = 6/201 (2%)

Query: 36  MNSALLHPCSTPLFLEAKDLYRNNRKLASTICCSSS-RNDPYIPKLEPFSRSKSERAAKD 94
           MNS         LFL    L+ N       IC SSS RN  +IPKL+PFSR+K +R AKD
Sbjct: 1   MNSTTTTLLRPSLFL----LHHNPTSSTKLICSSSSSRNQSFIPKLQPFSRTKLDRLAKD 56

Query: 95  PPLIEKSEKELLDYCSAVEGEESYSCWQAYFELKDLEKESPKSDIERLILETGGVKSLVG 154
            PLIEKSEK+LLDYCS +EG+ESYSCWQAYFELKDL+KESP+++IERLI+E GGVKSL+G
Sbjct: 57  LPLIEKSEKDLLDYCSILEGDESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIG 116

Query: 155 VLHGIALMHKLKKEGLNFAKEVKSEEEHIHNCPIPDGLPKSADEMMEEEQGRMPDSPYTR 214
            LHGIALM KLKK  LN   E+ SEEE  + CP PDGLPKSADEMMEEEQ +MPDS YT+
Sbjct: 117 CLHGIALMRKLKKNDLNLTNEIYSEEEQ-NPCPRPDGLPKSADEMMEEEQAKMPDSSYTK 175

Query: 215 LLRTMGRFPAWYSQAPDHETD 235
           LLR+MG+ PAWYS+APDHETD
Sbjct: 176 LLRSMGKSPAWYSEAPDHETD 196


>Medtr4g087160.2 | maternal effect embryo arrest protein, putative |
           HC | chr4:34149676-34147953 | 20130731
          Length = 189

 Score =  239 bits (611), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/201 (64%), Positives = 150/201 (74%), Gaps = 13/201 (6%)

Query: 36  MNSALLHPCSTPLFLEAKDLYRNNRKLASTICCSSS-RNDPYIPKLEPFSRSKSERAAKD 94
           MNS         LFL    L+ N       IC SSS RN  +IPKL+PFSR+K +R AKD
Sbjct: 1   MNSTTTTLLRPSLFL----LHHNPTSSTKLICSSSSSRNQSFIPKLQPFSRTKLDRLAKD 56

Query: 95  PPLIEKSEKELLDYCSAVEGEESYSCWQAYFELKDLEKESPKSDIERLILETGGVKSLVG 154
            PLIEKSEK+LL       G+ESYSCWQAYFELKDL+KESP+++IERLI+E GGVKSL+G
Sbjct: 57  LPLIEKSEKDLL-------GDESYSCWQAYFELKDLQKESPRAEIERLIIEIGGVKSLIG 109

Query: 155 VLHGIALMHKLKKEGLNFAKEVKSEEEHIHNCPIPDGLPKSADEMMEEEQGRMPDSPYTR 214
            LHGIALM KLKK  LN   E+ SEEE  + CP PDGLPKSADEMMEEEQ +MPDS YT+
Sbjct: 110 CLHGIALMRKLKKNDLNLTNEIYSEEEQ-NPCPRPDGLPKSADEMMEEEQAKMPDSSYTK 168

Query: 215 LLRTMGRFPAWYSQAPDHETD 235
           LLR+MG+ PAWYS+APDHETD
Sbjct: 169 LLRSMGKSPAWYSEAPDHETD 189