Miyakogusa Predicted Gene
- Lj4g3v0526630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0526630.1 tr|G7JNK6|G7JNK6_MEDTR Sorting nexin-16
OS=Medicago truncatula GN=MTR_4g087210 PE=4 SV=1,73.6,0,no
description,Phox homologous domain; PX domain,Phox homologous domain;
PX,Phox homologous domain; ,CUFF.47565.1
(739 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC | ... 1037 0.0
Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC | ... 795 0.0
Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |... 303 5e-82
Medtr4g101240.1 | PX-SNX19-like-plant protein | HC | chr4:418019... 263 4e-70
Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |... 194 2e-49
Medtr4g012875.1 | phox (PX) domain protein | HC | chr4:3458794-3... 115 1e-25
>Medtr4g087210.1 | sorting nexin carboxy-terminal protein | HC |
chr4:34163977-34175592 | 20130731
Length = 1039
Score = 1037 bits (2681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/750 (70%), Positives = 592/750 (78%), Gaps = 22/750 (2%)
Query: 1 MGGDQSTNVTSQHHGHSVATGGGHDKHKASKKHTSLSQGTEMVLAKKSDHGETSLQNNTL 60
MGGDQSTNV S HHG+SVA GGHD AS KH L QGTEM LAK SD GETSLQNN++
Sbjct: 298 MGGDQSTNVASHHHGNSVANSGGHDNLTASSKHPPLYQGTEMTLAKMSDRGETSLQNNSV 357
Query: 61 HEESLQVRPADWARVLDAATQRRTEILMPENLENMWAKGKNYKRKENKIMKAGFQDLPAK 120
H++S Q +PADWA++L+ ATQRRTEILMPENLENMWAKG+NYKRKENKI+K G QDL K
Sbjct: 358 HQKSSQPKPADWAQMLEVATQRRTEILMPENLENMWAKGRNYKRKENKIVKTGSQDLHTK 417
Query: 121 SPATDSSTPHKKLAPETLVSKRGKYGIVEGKSSLPPMPALGSDPLQSAGNTNSSEYSPNP 180
S ATD S ++K+ ETLVSK GK+ E KSSLP AL SDPLQS +TN SE S P
Sbjct: 418 SSATDRSLLNRKMNQETLVSKHGKHEAAEVKSSLPSTHALTSDPLQSVASTNISESSQYP 477
Query: 181 DKELSFEGEIGVDKVKGIEKDLASDGYKNPLKRSNSASALGI-LPKHGGSIISEFYNPEF 239
DK SFEGE+ VDK+KG KDLASDGYK+ LKRS+SASAL I L + G SIISEF+NPEF
Sbjct: 478 DKTSSFEGELRVDKMKGT-KDLASDGYKSSLKRSSSASALAIHLNQEGSSIISEFFNPEF 536
Query: 240 ERHSEGFRGKSSSDMIIRKEGQLFPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWF 299
ER EGFRGKSSSDMI+RKEGQL PKLRCRV+GAYFEK+ ST FAVYSIAVTDAQNRTWF
Sbjct: 537 ERR-EGFRGKSSSDMIVRKEGQLAPKLRCRVVGAYFEKIASTSFAVYSIAVTDAQNRTWF 595
Query: 300 VKRRYRNFERLHRYLKDIPNYTLHLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANV 359
VKRRYRNFERLHR+LKDIPNYTLHLPPKRIFSS+TDDAFVHQRC+QLDKYLQDLLSIANV
Sbjct: 596 VKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSNTDDAFVHQRCVQLDKYLQDLLSIANV 655
Query: 360 AEQHEVWDFFXXXXXXXXXXXXXXXMKTLXXXXXXXXXXXXRQFKGVSDGLMRKVVRSPI 419
AEQHEVWDFF MKTL RQFKGVSDGL RKV SP
Sbjct: 656 AEQHEVWDFFSVSSKNYSFGKSSSVMKTLAVNVDDAVDDIVRQFKGVSDGLRRKVGGSPS 715
Query: 420 LINEGSSTSTTWNMEWNADEIDRSIPGQSTTDSVISSDNEEGEKNINFGQENVDREVAQG 479
L+NEG STS + WNADE+D+S QS T SV+SSD E+G++N N G +N DRE Q
Sbjct: 716 LLNEGPSTSLY--LPWNADELDKSTTQQSATTSVLSSDTEDGDRNSNLGHDNFDREEVQ- 772
Query: 480 DGWQSDNALISKDYQTSAINHAEESSNMDFDR-----------NDVTATNSILVHDNLED 528
DNALI K Y + ++ +ESSN+ DR NDV TNSIL DNLED
Sbjct: 773 -----DNALILKGYPSLVTDYTDESSNLAIDRQRDLSEEARISNDVPTTNSILTRDNLED 827
Query: 529 PVGVPPEWAPPNVSVPLLNLVDKIFQLKKRGWLRRQVFWISKQILQLVMEDAIDDWLLRQ 588
PVGVPPEW+PPNVSVPLLNLVDKIFQLKKRGW+RRQVFW+SKQILQLVMEDAIDDWLL Q
Sbjct: 828 PVGVPPEWSPPNVSVPLLNLVDKIFQLKKRGWIRRQVFWMSKQILQLVMEDAIDDWLLMQ 887
Query: 589 INWLRREDTIAHGIRWIQDVLWPGGTFFLKIGSSQMVSSGSDQKHSQTRSGPGGSNIMKS 648
I+WLR+EDT+A GIRW+QDVLWPGG FF ++ Q+ + GSD+K SQT SG GG NI K
Sbjct: 888 IHWLRKEDTVAQGIRWLQDVLWPGGMFFTRVRLPQITNGGSDEKPSQTISGSGGRNITKH 947
Query: 649 ESGSFEQQLEAARRASDIKKLLFDGTPTTLVSLIGHKQYRRCARDIYYFSQSTICVKQLA 708
ESGSFE+QLEAARR SDIKKLLFDG PTTLVSLIGH QYRRCARDIYYFSQS +C+KQLA
Sbjct: 948 ESGSFEEQLEAARRESDIKKLLFDGAPTTLVSLIGHNQYRRCARDIYYFSQSPVCMKQLA 1007
Query: 709 YAILELLLVSIFPETRNVVLSVRESVHVHQ 738
YAILELLLVSIFPE RNVVLSV E+++VHQ
Sbjct: 1008 YAILELLLVSIFPEMRNVVLSVHENMNVHQ 1037
>Medtr1g034190.1 | sorting nexin carboxy-terminal protein | HC |
chr1:12405519-12415983 | 20130731
Length = 996
Score = 795 bits (2052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/707 (59%), Positives = 492/707 (69%), Gaps = 35/707 (4%)
Query: 49 DHGETSLQNNTLHEESLQVRPADWARVLDAATQRRTEILMPENLENMWAKGKNYKRKENK 108
DH +S +T H ADWA++LDAATQRRTE+LMPENLENMWA+G+NY R+ K
Sbjct: 308 DH--SSNATSTTHNHDNHTASADWAQMLDAATQRRTEVLMPENLENMWARGRNYGRETRK 365
Query: 109 IMKAGFQDLPAKSPATDSSTPHKKLAPETLVSKRGKYGIVEGKSSLPPMPALGSDPLQSA 168
K+G PAK + D S + ET K G + P+ ++GSDP+
Sbjct: 366 NAKSGS---PAKHSSADHSLFERHSTHETSPRK-------PGGTHAYPLHSVGSDPILYD 415
Query: 169 GNTNSSEYSPNPDKELSFEGEIGVDKVKGIEKDLASDGYKNPLKR--SNSASALGILPKH 226
G+T SE S + K LSFE + V +V I DL S+ +K PL+R S S+S LG P H
Sbjct: 416 GSTTMSESSMDHGKSLSFESDRQVAEVSDI-MDLGSNMHKLPLRRTGSGSSSLLGAHP-H 473
Query: 227 GGSIISEFYNPEFERHSEGFRGKSSSDMIIRKEGQLFPKLRCRVMGAYFEKLGSTCFAVY 286
G +EF+ PEF++H EGF GKSS DM R+EGQ PKLRCRVMGAYFEKLGST FAVY
Sbjct: 474 KGGFNAEFHAPEFKKH-EGFWGKSSFDMATRREGQGVPKLRCRVMGAYFEKLGSTSFAVY 532
Query: 287 SIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTLHLPPKRIFSSSTDDAFVHQRCIQL 346
SIAVTD Q +TWFVKRRYRNFERLHR+LK IPNYTLHLPPKRIFSSST+DAFVHQRCIQL
Sbjct: 533 SIAVTDGQEKTWFVKRRYRNFERLHRHLKHIPNYTLHLPPKRIFSSSTEDAFVHQRCIQL 592
Query: 347 DKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXXXXMKTLXXXXXXXXXXXXRQFKGV 406
DKYL DLLSIANVAEQHEVWDF M+TL RQFKGV
Sbjct: 593 DKYLHDLLSIANVAEQHEVWDFLSSSSKNYSFGKPSSMMRTLAVNVDDAVDDIVRQFKGV 652
Query: 407 SDGLMRKV-VRSPILINEGSSTSTTWNMEWNADEIDRSIPGQSTTDSVISSDNEEGEKNI 465
SD L RKV S EGSS S TWNM DE+DRS P ++ +S +SSD EEGEK
Sbjct: 653 SDDLKRKVGTASSSPTAEGSSKSFTWNM----DEMDRSNPSKNAAESALSSDTEEGEKEG 708
Query: 466 NFGQENVDREVAQGDGWQSDNALISKDYQTSAINHAEESSNMDFDR-----------NDV 514
N+ E++ REVA+ +DN L SKDY +NH E SN+D DR DV
Sbjct: 709 NYSHESIAREVAEDSLCLNDNELSSKDYSQGVLNHGNEFSNLDLDRKHDVVIEAKVGKDV 768
Query: 515 TATNSILVHDNLEDPVGVPPEWAPPNVSVPLLNLVDKIFQLKKRGWLRRQVFWISKQILQ 574
ATN L HDN EDP+GVPPEW PPNV+VP+LNLVD +FQL KRGWLRRQVFWISKQILQ
Sbjct: 769 PATNGSLSHDNPEDPIGVPPEWTPPNVTVPILNLVDNVFQLNKRGWLRRQVFWISKQILQ 828
Query: 575 LVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGTFFLKIGSSQMVSSG--SDQK 632
LVMEDAIDD LL +I+WLRRE+TIA GIRW+QD+LWPGGTFFL+I + Q+ G +DQK
Sbjct: 829 LVMEDAIDDILLSEIHWLRREETIAQGIRWVQDILWPGGTFFLRIQTPQVFIGGGVTDQK 888
Query: 633 HSQTRSGPGGSNIMKSESGSFEQQLEAARRASDIKKLLFDGTPTTLVSLIGHKQYRRCAR 692
QT S G KS+ FE+QLEAARRASD+KKLLFDG P LVSL+G KQYRRCA
Sbjct: 889 PLQTISESGERTSQKSQLWCFEEQLEAARRASDVKKLLFDGAPAALVSLVGQKQYRRCAS 948
Query: 693 DIYYFSQSTICVKQLAYAILELLLVSIFPETRNVVLSVRESVHVHQP 739
DIY+FSQS+ICVKQLAYAILELLL+S+FPE RNVV+SV E++HVHQP
Sbjct: 949 DIYFFSQSSICVKQLAYAILELLLISVFPELRNVVMSVHENMHVHQP 995
>Medtr0147s0080.1 | sorting nexin carboxy-terminal protein | HC |
scaffold0147:38059-27596 | 20130731
Length = 1117
Score = 303 bits (775), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 179/479 (37%), Positives = 251/479 (52%), Gaps = 51/479 (10%)
Query: 263 FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
F KLRC V+GA K GS FAVYSI+VTD N +W +KRR+R+FE LHR LK+ P Y L
Sbjct: 677 FYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNL 736
Query: 323 HLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXX 382
HLPPK SS D A + +RC LDKYL+ L+ + V+E E+WDF
Sbjct: 737 HLPPKHFLSSGLDVATIQERCELLDKYLKKLMQLPTVSESIELWDFLSVDSQTYIFSNSF 796
Query: 383 XXMKTLXXXXXXXXXXXXRQFKGVS----DGLMRKVVRSPILINE-GSSTSTTWNMEWNA 437
M+TL + VS D +R+ R+ ++ N G ++T
Sbjct: 797 SIMETLPVGLDAKSSEKTKISSNVSAPGSDPFLRR--RNNVVANGLGPKVNST------- 847
Query: 438 DEIDRSIPGQSTTDSVISSDNEEGEKNINFGQENVDREVAQGDGWQSDNALISKDYQTSA 497
S P + T E +FG A W+S S+
Sbjct: 848 ---PLSPPAKKNTQ----------ESRQSFGNSG---STADSLAWKS---------APSS 882
Query: 498 INHAEESSNMDFDRNDVTATNSILVHDNLEDPVGVPPEWAPPNVSVPLLNLVDKIFQLKK 557
N+ ++S ++V+ VH N D +P EW PPN+S P+L+LVD IFQL+
Sbjct: 883 PNNLQKSVKGRDSSDEVSN-----VHHNTAD--TLPTEWVPPNLSAPILDLVDVIFQLQD 935
Query: 558 RGWLRRQVFWISKQILQLVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGTFFL 617
GW+RRQ FW++KQ+LQL M DA DDWLL +I LR+ IA G+ ++ +LWP G F
Sbjct: 936 GGWIRRQAFWVAKQVLQLGMGDAFDDWLLEKILLLRKGSVIASGVTRVEQILWPDGIFLT 995
Query: 618 KIGSSQMVSSGSDQKHSQTRSGPGGSNIMKSESGSF-EQQLEAARRASDIKKLLFDGTPT 676
K S +++ P G+ S +++ EA RRA + +L+ D P
Sbjct: 996 K----HPNRRPPPTPTSLSQNSPNGNQPTPVSSPRMDDEKQEADRRAKFVYELMIDQAPP 1051
Query: 677 TLVSLIGHKQYRRCARDIYYFSQSTICVKQLAYAILELLLVSIFPETRNVVLSVRESVH 735
T+VSL+G K+Y +CARD+Y+F QS++C+KQLA+ +LE+LL+S FPE +V V E H
Sbjct: 1052 TIVSLVGRKEYEQCARDLYFFLQSSVCLKQLAFDLLEMLLLSAFPELDDVFKQVHEEKH 1110
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 70 ADWARVLDAATQRRTEILMPENLENMWAKGKNYKRK--ENKIMKAGFQDLP-AKSPATD 125
+W +LD ++R+T+ L PE+ EN+WAKGKNY++K EN+ + Q P KSP D
Sbjct: 390 GEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPPMGKSPKVD 448
>Medtr4g101240.1 | PX-SNX19-like-plant protein | HC |
chr4:41801972-41804060 | 20130731
Length = 210
Score = 263 bits (673), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/165 (77%), Positives = 141/165 (85%), Gaps = 1/165 (0%)
Query: 206 GYKNPLKRSNSASALGILP-KHGGSIISEFYNPEFERHSEGFRGKSSSDMIIRKEGQLFP 264
GYK+ LKRS++ASALGI P + GGSI SE +NPEFE E F KSSSDMI+R+EGQL P
Sbjct: 18 GYKSSLKRSSNASALGIQPNQEGGSIFSEIFNPEFETRCERFSWKSSSDMIVRREGQLAP 77
Query: 265 KLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTLHL 324
K C V+G+YFEK+GST FAVYSIAVTDA NRTWFVKRRY NFER HR+L+ IPNYTLHL
Sbjct: 78 KHLCWVVGSYFEKIGSTSFAVYSIAVTDAHNRTWFVKRRYWNFERFHRHLRVIPNYTLHL 137
Query: 325 PPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFF 369
PPKRIFSS+T DAFVHQ C QLDKYLQDLLSIANVAEQHEVWDFF
Sbjct: 138 PPKRIFSSNTYDAFVHQCCAQLDKYLQDLLSIANVAEQHEVWDFF 182
>Medtr0147s0080.2 | sorting nexin carboxy-terminal protein | HC |
scaffold0147:38059-30941 | 20130731
Length = 1001
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/363 (34%), Positives = 177/363 (48%), Gaps = 53/363 (14%)
Query: 263 FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
F KLRC V+GA K GS FAVYSI+VTD N +W +KRR+R+FE LHR LK+ P Y L
Sbjct: 677 FYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNL 736
Query: 323 HLPPKRIFSSSTDDAFVHQRCIQLDKYLQDLLSIANVAEQHEVWDFFXXXXXXXXXXXXX 382
HLPPK SS D A + +RC LDKYL+ L+ + V+E E+WDF
Sbjct: 737 HLPPKHFLSSGLDVATIQERCELLDKYLKKLMQLPTVSESIELWDFLSVDSQTYIFSNSF 796
Query: 383 XXMKTLXXXXXXXXXXXXRQFKGV----SDGLMRKVVRSPILIN----EGSSTSTTWNME 434
M+TL + V SD +R+ R+ ++ N + +ST + +
Sbjct: 797 SIMETLPVGLDAKSSEKTKISSNVSAPGSDPFLRR--RNNVVANGLGPKVNSTPLSPPAK 854
Query: 435 WNADEIDRSIPGQSTTDSVISSDNEEGEKNINFGQENVDREVAQGDGWQSDNALISKDYQ 494
N E +S +T ++ + N N+ + V D
Sbjct: 855 KNTQESRQSFGNSGSTADSLAWKSAPSSPN------NLQKSVKGRDS------------- 895
Query: 495 TSAINHAEESSNMDFDRNDVTATNSILVHDNLEDPVGVPPEWAPPNVSVPLLNLVDKIFQ 554
++E SN+ + D T + PP N+S P+L+LVD IFQ
Sbjct: 896 ------SDEVSNVHHNTADTLPTEWV------------PP-----NLSAPILDLVDVIFQ 932
Query: 555 LKKRGWLRRQVFWISKQILQLVMEDAIDDWLLRQINWLRREDTIAHGIRWIQDVLWPGGT 614
L+ GW+RRQ FW++KQ+LQL M DA DDWLL +I LR+ IA G+ ++ V+
Sbjct: 933 LQDGGWIRRQAFWVAKQVLQLGMGDAFDDWLLEKILLLRKGSVIASGVTRVEQVIL-RSV 991
Query: 615 FFL 617
FFL
Sbjct: 992 FFL 994
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 70 ADWARVLDAATQRRTEILMPENLENMWAKGKNYKRK--ENKIMKAGFQDLP-AKSPATD 125
+W +LD ++R+T+ L PE+ EN+WAKGKNY++K EN+ + Q P KSP D
Sbjct: 390 GEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPPMGKSPKVD 448
>Medtr4g012875.1 | phox (PX) domain protein | HC |
chr4:3458794-3452760 | 20130731
Length = 774
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 62/89 (69%)
Query: 263 FPKLRCRVMGAYFEKLGSTCFAVYSIAVTDAQNRTWFVKRRYRNFERLHRYLKDIPNYTL 322
F KLRC V+GA K GS FAVYSI+VTD N +W +KRR+R+FE LHR LK+ P Y L
Sbjct: 677 FYKLRCEVLGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRRLKEFPEYNL 736
Query: 323 HLPPKRIFSSSTDDAFVHQRCIQLDKYLQ 351
HLPPK SS D A + +RC LDKYL+
Sbjct: 737 HLPPKHFLSSGLDVATIQERCELLDKYLK 765
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 70 ADWARVLDAATQRRTEILMPENLENMWAKGKNYKRK--ENKIMKAGFQDLP-AKSPATD 125
+W +LD ++R+T+ L PE+ EN+WAKGKNY++K EN+ + Q P KSP D
Sbjct: 390 GEWGDILDVVSRRKTQTLAPEHFENVWAKGKNYQKKDGENQSNERAPQHPPMGKSPKVD 448