Miyakogusa Predicted Gene

Lj4g3v0524580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0524580.1 Non Characterized Hit- tr|H2LG32|H2LG32_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=CDCA7L
P,30.24,8e-19,seg,NULL; zf-4CXXC_R1,Zinc-finger domain of
monoamine-oxidase A repressor R1; coiled-coil,NULL;
SUBF,gene.g52808.t1.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087240.1 | zinc-finger of monoamine-oxidase A repressor R...   282   3e-76
Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R...   205   4e-53
Medtr5g018470.1 | zinc-finger of monoamine-oxidase A repressor R...   182   3e-46
Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R...    77   2e-14
Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor ...    76   4e-14
Medtr1g083120.1 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.5 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.2 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.3 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.4 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.7 | transcription factor jumonji domain protein | ...    51   1e-06
Medtr1g083120.6 | transcription factor jumonji domain protein | ...    51   1e-06

>Medtr4g087240.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr4:34198862-34202754 | 20130731
          Length = 319

 Score =  282 bits (721), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 146/252 (57%), Positives = 167/252 (66%), Gaps = 17/252 (6%)

Query: 32  SNYEQIRQQRIKENMERMHKLGLVDLSLXXXXXXXXXXXXXXNVLPQHLSPQRRSSRIMS 91
           S+YE+IR+QR++EN ERMHKLGL+ LS               N LP + S +RRSSR+ +
Sbjct: 47  SHYERIREQRMEENAERMHKLGLLKLSGNLKKTPKPRPSVKKNSLPSNES-ERRSSRLST 105

Query: 92  MEPVKYSYDSPRQKRDXXXXXXXXXXXVNIFIAEGTNPEVYTEEHEKLLADYESTWELNV 151
           + PV Y    P+ +R            V I I EGTNPEVYTEEHEKLL D E+ WEL V
Sbjct: 106 LPPVNYCSKRPKAERQESSSSKKRKE-VEIHIPEGTNPEVYTEEHEKLLGDCETDWELYV 164

Query: 152 DGYDEDGDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEAN 211
           DGYDEDGD I DPTKGEKCHQC  LTV Q T CNKCELPQG+LCGDCL+TRYGENV EAN
Sbjct: 165 DGYDEDGDHIYDPTKGEKCHQCGRLTVAQLTDCNKCELPQGRLCGDCLYTRYGENVTEAN 224

Query: 212 YNPNWTCPACRGICNCNSCRREKGWASTGNIYN---------------KTRLSEKGLEDS 256
            NP WTCP+CR ICNCNSCRR+ GW  TGNIYN               KTR SE+ +E  
Sbjct: 225 INPKWTCPSCREICNCNSCRRKNGWLPTGNIYNKVTKLGFKSVAHYLIKTRRSEESMEGP 284

Query: 257 GGENIVAEGSPE 268
           G EN VA+  PE
Sbjct: 285 GAENNVAKEIPE 296


>Medtr5g018400.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr5:6858343-6862565 | 20130731
          Length = 385

 Score =  205 bits (521), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 101/223 (45%), Positives = 132/223 (59%), Gaps = 14/223 (6%)

Query: 30  EVSNYEQIRQQRIKENMERMHKLGLVDLSLXXXXXXXXXXXXXXNVLPQH------LSPQ 83
           ++S YE  R++RI+EN ERM KLG++D+SL              +  P+         P 
Sbjct: 27  KISEYELSREERIRENHERMGKLGILDISLSLKLKPNPPSRRTPSNNPKSPISLNPSGPS 86

Query: 84  RRSSRIMSMEPVKYSYDSPRQKRDXXXXXXXXXXXVNIFIAEGTNPEVYTEEHEKLLADY 143
           RRSSR+ ++ P+ YS        +             I I EG  PE+YT+EHEKLL + 
Sbjct: 87  RRSSRLQNVAPISYS--------EAQVKGEKREKSTRIVIREGPQPEIYTKEHEKLLGNT 138

Query: 144 ESTWELNVDGYDEDGDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRY 203
           E TWEL VDG  +DG RI D  +G+ CHQCR  T+G  T C +C + QGQ CGDCL+ RY
Sbjct: 139 EKTWELFVDGVGKDGKRIYDSVQGKSCHQCRQKTLGYRTRCCECHMGQGQFCGDCLYMRY 198

Query: 204 GENVLEANYNPNWTCPACRGICNCNSCRREKGWASTGNIYNKT 246
           GE+V+EA  +P W CP CRGICNC+ CR+ KGW  TGN+Y K 
Sbjct: 199 GEHVIEALADPTWKCPRCRGICNCSLCRKAKGWEPTGNLYRKV 241


>Medtr5g018470.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr5:6887294-6892209 | 20130731
          Length = 416

 Score =  182 bits (462), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 104/223 (46%), Positives = 131/223 (58%), Gaps = 15/223 (6%)

Query: 31  VSNYEQIRQQRIKENMERMHKLGLVD--LSLXXXXXXXXXXXXXXNVLPQHLS-----PQ 83
           +S YE  R++RI+EN ERM KLG++D  LSL              N     +S     P 
Sbjct: 29  MSEYELSREERIRENRERMGKLGILDISLSLKLKPNPPPSRRTPSNNPKSPISLNPSGPS 88

Query: 84  RRSSRIMSMEPVKYSYDSPRQKRDXXXXXXXXXXXVNIFIAEGTNPEVYTEEHEKLLADY 143
           RRSSR+ ++ P+ YS        +             I + EG+ PE+YTEEHEKLL + 
Sbjct: 89  RRSSRLQNVAPISYS--------EVPVKGEKLEKSNRIVLREGSQPEIYTEEHEKLLGNT 140

Query: 144 ESTWELNVDGYDEDGDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRY 203
           E TWEL VDG  +DG RI D  +G+ CHQCR  T+G  T C +C + QGQ CGDCL+ RY
Sbjct: 141 EKTWELFVDGVGKDGKRIYDSVQGKTCHQCRQKTLGYRTRCCECNIVQGQFCGDCLYMRY 200

Query: 204 GENVLEANYNPNWTCPACRGICNCNSCRREKGWASTGNIYNKT 246
           GE+VLEA  +P W CP CRGICNC+ CR  KGW  TGN+Y K 
Sbjct: 201 GEHVLEALADPTWKCPPCRGICNCSICRNAKGWEPTGNLYRKV 243


>Medtr6g017265.1 | zinc-finger of monoamine-oxidase A repressor R1 |
           HC | chr6:6917300-6911610 | 20130731
          Length = 634

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 9/98 (9%)

Query: 158 GDRIIDPTKGEKCHQCRHLTVGQFTTCNKCELPQG------QLCGDCLFTRYGENVLEAN 211
           G+RI D   G+ CHQCR  T+  F+    C+ P+G      + C  CL  RYGE   E +
Sbjct: 43  GNRIYDSENGKSCHQCRQKTM-DFSAA--CKNPRGGKPCVIRFCHKCLLNRYGEKAEEVD 99

Query: 212 YNPNWTCPACRGICNCNSCRREKGWASTGNIYNKTRLS 249
              +W CP C+GICNC+ C + +G   TG + +  + S
Sbjct: 100 LLNDWNCPKCKGICNCSRCMKNRGHQPTGILVHSAKAS 137


>Medtr0024s0330.1 | zinc-finger of monoamine-oxidase A repressor R1
           | LC | scaffold0024:150614-158393 | 20130731
          Length = 735

 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 56/120 (46%), Gaps = 18/120 (15%)

Query: 148 ELNVDGYDEDG---------------DRIIDPTKGEKCHQCRHLTVGQFTTCN--KCELP 190
           ELNV G D +G               +RI D   G+ CHQCR  T      C   +   P
Sbjct: 9   ELNVKGSDANGKKLNRNNKCGVRVIGNRIYDSANGKTCHQCRQKTRDFSAACKNPRTGKP 68

Query: 191 -QGQLCGDCLFTRYGENVLEANYNPNWTCPACRGICNCNSCRREKGWASTGNIYNKTRLS 249
            Q + C  CL  RYGE   E     +W CP CRGICNC+ C +++G   TG + +  + S
Sbjct: 69  CQIRFCHKCLLNRYGEKAEEVELLNDWMCPKCRGICNCSFCMKKRGEQPTGILVHSAKAS 128


>Medtr1g083120.1 | transcription factor jumonji domain protein | HC
           | chr1:37001873-36993703 | 20130731
          Length = 947

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 210 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 263

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 264 CNCKICLR 271


>Medtr1g083120.5 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36993703 | 20130731
          Length = 930

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254


>Medtr1g083120.2 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36993703 | 20130731
          Length = 930

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254


>Medtr1g083120.3 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36995450 | 20130731
          Length = 848

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254


>Medtr1g083120.4 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36995450 | 20130731
          Length = 848

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254


>Medtr1g083120.7 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36994785 | 20130731
          Length = 855

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254


>Medtr1g083120.6 | transcription factor jumonji domain protein | HC
           | chr1:37001524-36994785 | 20130731
          Length = 855

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 6/68 (8%)

Query: 165 TKGEKCHQCRHLTVGQFTTCNKCELPQGQLCGDCLFTRYGENVLEANYNPNWTCPACRGI 224
           T G+ CHQCR   V   T C KC+  +   C  C+ T Y +  L+        CPACRGI
Sbjct: 193 TGGQTCHQCRK-NVKDVTWCLKCD--RRGYCDSCISTWYSDIPLDEIQK---ICPACRGI 246

Query: 225 CNCNSCRR 232
           CNC  C R
Sbjct: 247 CNCKICLR 254