Miyakogusa Predicted Gene

Lj4g3v0510150.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510150.1 Non Characterized Hit- tr|D7SQZ5|D7SQZ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,29.47,0.00000000000002,coiled-coil,NULL;
PMD,Aminotransferase-like, plant mobile domain,CUFF.47535.1
         (367 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131860.1 | hypothetical protein | LC | chr4:55040611-5504...   137   2e-32
Medtr1g050140.1 | hypothetical protein | LC | chr1:19150743-1914...   136   3e-32
Medtr7g102530.1 | hypothetical protein | LC | chr7:41547311-4154...   136   3e-32
Medtr3g014760.1 | hypothetical protein | LC | chr3:4265775-42675...   136   3e-32
Medtr0186s0120.1 | hypothetical protein | HC | scaffold0186:2963...    77   3e-14
Medtr8g009990.1 | hypothetical protein | HC | chr8:2500302-25017...    67   4e-11
Medtr6g464160.1 | hypothetical protein | LC | chr6:22354728-2235...    66   7e-11
Medtr3g014770.1 | hypothetical protein | HC | chr3:4270279-42699...    53   5e-07
Medtr1g050130.1 | hypothetical protein | HC | chr1:19146240-1914...    52   7e-07
Medtr4g131870.1 | hypothetical protein | HC | chr4:55045710-5504...    52   9e-07
Medtr1g054565.1 | hypothetical protein | HC | chr1:23673520-2367...    52   9e-07

>Medtr4g131860.1 | hypothetical protein | LC |
           chr4:55040611-55042557 | 20130731
          Length = 309

 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 9/157 (5%)

Query: 12  VRLRNKCGTCYILRANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRK 71
           +RLR++C + YI + N         ++LT+L    I+ TPFKW L L +K+ IS  LL +
Sbjct: 2   LRLRHECKSKYITKVN---------EKLTELQRSEIQKTPFKWLLSLPKKLKISENLLEE 52

Query: 72  LISRWSPDGGGFRVGTRVIHFTPLDVCFALGLCISGEPVERNEEAESQTRALFVDDRITL 131
           L+ RW    GGF +  R+I FTPLDVCFALGL I GE +    +  S T+A+F ++ I +
Sbjct: 53  LVERWDDRSGGFAIQGRIIRFTPLDVCFALGLRIIGEKMNFKNDPTSTTKAMFDNEVINV 112

Query: 132 EVIYENLELCMNEGRVDDFCRLYIILAFADFYFPNTS 168
           + IY  +     +  V+ FCRLY++L FA+FYFPN+S
Sbjct: 113 KTIYAKIINMERDEDVEKFCRLYLLLGFAEFYFPNSS 149


>Medtr1g050140.1 | hypothetical protein | LC |
           chr1:19150743-19148966 | 20130731
          Length = 309

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 97/157 (61%), Gaps = 9/157 (5%)

Query: 12  VRLRNKCGTCYILRANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRK 71
           +RLR++C + YI + N         ++LT+L    I+ TPFKW L L +K+ IS  LL +
Sbjct: 2   LRLRHECKSKYITKVN---------EKLTELQRSEIQKTPFKWLLSLPKKLKISENLLEE 52

Query: 72  LISRWSPDGGGFRVGTRVIHFTPLDVCFALGLCISGEPVERNEEAESQTRALFVDDRITL 131
           L+ RW    GGF +  R+I FTPLDVCFALGL I GE V    +  S T+A+F ++ I +
Sbjct: 53  LVERWDDRSGGFAIQGRIIRFTPLDVCFALGLRIIGEKVNFKNDPTSTTKAMFDNEVINV 112

Query: 132 EVIYENLELCMNEGRVDDFCRLYIILAFADFYFPNTS 168
           + IY  +     +  V+ FCR Y++L FA+FYFPN+S
Sbjct: 113 KTIYAKIINMERDEDVEKFCRFYLLLGFAEFYFPNSS 149


>Medtr7g102530.1 | hypothetical protein | LC |
           chr7:41547311-41549088 | 20130731
          Length = 309

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 9/157 (5%)

Query: 12  VRLRNKCGTCYILRANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRK 71
           +RLR++C + YI + N         ++LT+L    I+ TPFKW L L +K+ IS  LL +
Sbjct: 2   LRLRHECKSKYITKVN---------EKLTELQRSEIQKTPFKWLLSLPKKLKISENLLEE 52

Query: 72  LISRWSPDGGGFRVGTRVIHFTPLDVCFALGLCISGEPVERNEEAESQTRALFVDDRITL 131
           L+ RW    GGF +  R+I FTPLDVCFALGL I GE +    +  S T+A+F ++ I +
Sbjct: 53  LVERWDDRSGGFAIQGRIIRFTPLDVCFALGLRIIGEKMNFKNDPTSTTKAMFDNEVINV 112

Query: 132 EVIYENLELCMNEGRVDDFCRLYIILAFADFYFPNTS 168
           + IY  +     +  V+ FCRLY++L FA+FYFPN+S
Sbjct: 113 KTIYAKIINMERDEDVEKFCRLYLLLGFAEFYFPNSS 149


>Medtr3g014760.1 | hypothetical protein | LC | chr3:4265775-4267552
           | 20130731
          Length = 303

 Score =  136 bits (343), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 68/157 (43%), Positives = 98/157 (62%), Gaps = 9/157 (5%)

Query: 12  VRLRNKCGTCYILRANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRK 71
           +RLR++C + YI + N         ++LT+L    I+ TPFKW L L +K+ IS  LL +
Sbjct: 2   LRLRHECKSKYITKVN---------EKLTELQRSEIQKTPFKWLLSLPKKLKISENLLEE 52

Query: 72  LISRWSPDGGGFRVGTRVIHFTPLDVCFALGLCISGEPVERNEEAESQTRALFVDDRITL 131
           L+ RW    GGF +  R+I FTPLDVCFALGL I GE +    +  S T+A+F ++ I +
Sbjct: 53  LVERWDDRSGGFAIQGRIIRFTPLDVCFALGLRIIGEKMNFKNDPTSTTKAMFDNEVINV 112

Query: 132 EVIYENLELCMNEGRVDDFCRLYIILAFADFYFPNTS 168
           + IY  +     +  V+ FCRLY++L FA+FYFPN+S
Sbjct: 113 KTIYAKIINMERDEDVEKFCRLYLLLGFAEFYFPNSS 149


>Medtr0186s0120.1 | hypothetical protein | HC |
           scaffold0186:29633-29262 | 20130731
          Length = 123

 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 4/121 (3%)

Query: 25  RANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRKLISRWSPDGGGFR 84
           R N L+     +++L+     R+  TPF++ + ++  I ++  LL +L+ RW     GFR
Sbjct: 3   RTNKLV---DINRKLSDTQRSRVMKTPFRYLVEMKTYIGMNSTLLTELLHRWDASSLGFR 59

Query: 85  VGTRVIHFTPLDVCFALGLCISGEPVERNEEAESQTRALF-VDDRITLEVIYENLELCMN 143
           VG R + F  LD+C ALGL I GE +  + +++SQ R LF V++ I ++ ++  L++   
Sbjct: 60  VGVRTVAFKHLDLCLALGLPILGESLPESIDSDSQVRTLFDVNEVIDIDSVHSKLKVLQE 119

Query: 144 E 144
           E
Sbjct: 120 E 120


>Medtr8g009990.1 | hypothetical protein | HC | chr8:2500302-2501730
           | 20130731
          Length = 304

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/213 (26%), Positives = 91/213 (42%), Gaps = 51/213 (23%)

Query: 132 EVIYENLELCMNEGRVDDFCRLYIILAFADFYFPNTSDFVNMSMFRLLDELDSLHRYNWG 191
           + ++  L++   E  +DDFCR+YI+ AF+                               
Sbjct: 70  DSVHSKLKVLQEEDNIDDFCRVYILFAFS------------------------------- 98

Query: 192 MAVHDNLVFSLNRAAKNFNESKNSEDLWVSGCVAVLQVWAVEHLQM--RPTNTMHHIKFP 249
                        AA  +++ KN   L +SGC AVLQ+WAVEHL +   P        FP
Sbjct: 99  -------------AASKYHQQKNDTVLHISGCSAVLQIWAVEHLSLCSGPNKC-----FP 140

Query: 250 RVLSKVHLGIKKRLITCAFDINNVQENLVISNEDRDYDVLREALALTKDGFCEIPNPSFV 309
            + +   +     +I+  F    + E LV + ED + DVL +A+  ++ G  +   P F 
Sbjct: 141 CINNWTKVEGGHVVISNNFSNAKLVEELVPTQEDMENDVLVKAVNHSEVGIGDGAYPLFD 200

Query: 310 VEGCHCGYQVLEEENRQLKEQVVRLEKDVVFIK 342
           V+     +Q L  E++ L  +V  LE D+  +K
Sbjct: 201 VQAYMAEHQRLVGEHKYLLSRVSILEDDMRILK 233


>Medtr6g464160.1 | hypothetical protein | LC |
           chr6:22354728-22356390 | 20130731
          Length = 131

 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 4/74 (5%)

Query: 95  LDVCFALGLCISGEPVERNEEAESQTRALFVDDRITLEVIYENLELCMNEGRVDDFCRLY 154
           LDVCFALGL I GE V   +E    T+A+F ++ I ++ I  N+E    +  V+ FCRLY
Sbjct: 5   LDVCFALGLRIIGEKVNFKKEPTCTTKAMFDNEVINVKTII-NME---GDEDVEKFCRLY 60

Query: 155 IILAFADFYFPNTS 168
           + L FA+FYFPN+S
Sbjct: 61  LHLGFAEFYFPNSS 74


>Medtr3g014770.1 | hypothetical protein | HC |
          chr3:4270279-4269911 | 20130731
          Length = 92

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)

Query: 25 RANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRKLISRWSPDGGGFR 84
          R N L+     +++L+     RI  TPF++ + ++  I ++G LL++L+ RW     GFR
Sbjct: 22 RTNKLV---DINRKLSDAQRSRIMKTPFRYLVEMKTYIGMNGTLLKELLHRWDASSLGFR 78

Query: 85 VGTRVIHFTPLDV 97
          VG R++ F  LD+
Sbjct: 79 VGVRIVAFKHLDL 91


>Medtr1g050130.1 | hypothetical protein | HC |
          chr1:19146240-19146608 | 20130731
          Length = 92

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 25 RANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRKLISRWSPDGGGFR 84
          R N L+     +++L+     RI  TPF++ + ++  I ++G LL++L+ RW     GFR
Sbjct: 22 RTNKLV---DINRKLSDAQRSRIMKTPFRYLVEMKTYIGMNGTLLKELLHRWDASSLGFR 78

Query: 85 VGTRVIHFTPLDV 97
          VG R + F  LD+
Sbjct: 79 VGVRTVAFKHLDL 91


>Medtr4g131870.1 | hypothetical protein | HC |
          chr4:55045710-55044374 | 20130731
          Length = 92

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 25 RANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRKLISRWSPDGGGFR 84
          R N L+     +++L+     RI  TPF++ + ++  I ++G LL++L+ RW     GFR
Sbjct: 22 RTNKLV---DINRKLSDAQRSRIMKTPFRYLVEMKTYIGMNGTLLKELLHRWDASSLGFR 78

Query: 85 VGTRVIHFTPLDV 97
          VG R + F  LD+
Sbjct: 79 VGVRTVAFKHLDL 91


>Medtr1g054565.1 | hypothetical protein | HC |
          chr1:23673520-23673944 | 20130731
          Length = 92

 Score = 52.0 bits (123), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)

Query: 25 RANNLLRDPKADKRLTQLISQRIEATPFKWCLYLEEKISISGILLRKLISRWSPDGGGFR 84
          R N L+     +++L+     RI  TPF++ + ++  I ++G LL++L+ RW     GFR
Sbjct: 22 RTNKLV---DINRKLSDAQRSRIMKTPFRYLVEMKTYIGMNGTLLKELLHRWDASSLGFR 78

Query: 85 VGTRVIHFTPLDV 97
          VG R + F  LD+
Sbjct: 79 VGVRTVAFKHLDL 91