Miyakogusa Predicted Gene

Lj4g3v0510070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0510070.1 Non Characterized Hit- tr|Q5GAR1|Q5GAR1_MAIZE
Putative uncharacterized protein OS=Zea mays GN=B9008
,50.62,0.0000000001,seg,NULL; coiled-coil,NULL,CUFF.47529.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087630.1 | hypothetical protein | HC | chr4:34431102-3442...   161   3e-40

>Medtr4g087630.1 | hypothetical protein | HC |
           chr4:34431102-34425753 | 20130731
          Length = 201

 Score =  161 bits (407), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/100 (81%), Positives = 83/100 (83%)

Query: 1   MGKNQAYKAMQRARLGGASAGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTVTWXXXXX 60
           MGKNQAYKAMQRARLGGAS GPDEVEDGMVDGSFHSPEWHAARLASLKTSHT+TW     
Sbjct: 1   MGKNQAYKAMQRARLGGASGGPDEVEDGMVDGSFHSPEWHAARLASLKTSHTITWEEYKK 60

Query: 61  XXXXXXXXXXXLEADADRMMREYRAQLDAERSRKLSQGRN 100
                      LEADAD+MMREYRAQLDAERSRKLSQGRN
Sbjct: 61  KQKEEELKKGELEADADKMMREYRAQLDAERSRKLSQGRN 100