Miyakogusa Predicted Gene

Lj4g3v0496570.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0496570.2 Non Characterized Hit- tr|C0PEM8|C0PEM8_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,55,9e-17,seg,NULL;
coiled-coil,NULL,CUFF.47499.2
         (391 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g087875.2 | hypothetical protein | HC | chr4:34582767-3457...   457   e-129
Medtr4g087875.3 | hypothetical protein | HC | chr4:34582767-3457...   457   e-129
Medtr4g087875.1 | hypothetical protein | HC | chr4:34582767-3457...   435   e-122

>Medtr4g087875.2 | hypothetical protein | HC |
           chr4:34582767-34574114 | 20130731
          Length = 817

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/387 (64%), Positives = 284/387 (73%), Gaps = 8/387 (2%)

Query: 4   SSTVGTQSFSFGCNKNADIHLRSKTQARDSFRSNDTRSGNKMVSDSLPGPGKLMRDAPAL 63
           SST GT+S SF   KN++IH RS TQ R++ +SN+T+ G+KMVS SLPG  K+ +DAPAL
Sbjct: 436 SSTAGTKSVSFDSEKNSNIHQRSITQERNNIKSNETKFGSKMVSSSLPGSSKVTKDAPAL 495

Query: 64  LGSKDDLASRSSTREGIVFDVTQSASKLAGNMKSFTEDVNRNKVKFQETNTSTKDVNILS 123
           LG KDDL S  +TREGIV DVT SA K      SF EDVNR K  F ET  S K+VNILS
Sbjct: 496 LGRKDDLKS-CNTREGIVLDVTPSAGK------SFHEDVNRRKAMFPETGMSAKNVNILS 548

Query: 124 SQVNPSSLTKKTAGITTQISVISQPEASGKESFQKSRITAVEGNKLSAVKVCKTTPALSS 183
           SQVNP SLT+KTA ITTQISV SQPEASGKESFQKS+IT++EGNKLS+ K CK TPA SS
Sbjct: 549 SQVNPCSLTEKTAKITTQISVNSQPEASGKESFQKSKITSIEGNKLSSFKSCKITPAFSS 608

Query: 184 LKTLRNIGANTVLATSSHQKEANSLVNSQHNKETQGITPLKNDHQTDSGDNKKLSNPFLK 243
           LKT RNIGAN+VLATS HQKEA SL +S+  KE Q I   K+DH T  GDN++ S  FLK
Sbjct: 609 LKTSRNIGANSVLATSLHQKEAKSLASSEQRKEIQTIAVSKSDHLTGGGDNQRPSATFLK 668

Query: 244 RKTIEDSEADLTSLRPLKRLSQX-XXXXXXXXXXXXXXXXXXXXXXXFLKYYSTSGVESP 302
           RK IE SEADLTSLRPLKRLSQ                            Y+STSG+ESP
Sbjct: 669 RKNIEVSEADLTSLRPLKRLSQSPIGSRNAEPKESSEKVEQVERKSSDFAYHSTSGLESP 728

Query: 303 SEIKVTEVEIPASVLMEDNSSVEKAEAYMKELEDICNMXXXXXXXXXXXXVRAIVNNNNL 362
           SEIKVTEVEIP SVLMEDNS+VEKAEAYMKELE+ICNM            VRA+VN+NNL
Sbjct: 729 SEIKVTEVEIPDSVLMEDNSNVEKAEAYMKELENICNMLKKRHEEAKELLVRAVVNDNNL 788

Query: 363 LMLNHPIYDEEIQKVQKFASQVMSEGI 389
           LMLNHPIY+E+I+KVQKFASQ+MS+ I
Sbjct: 789 LMLNHPIYEEKIRKVQKFASQMMSKEI 815


>Medtr4g087875.3 | hypothetical protein | HC |
           chr4:34582767-34574213 | 20130731
          Length = 817

 Score =  457 bits (1177), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/387 (64%), Positives = 284/387 (73%), Gaps = 8/387 (2%)

Query: 4   SSTVGTQSFSFGCNKNADIHLRSKTQARDSFRSNDTRSGNKMVSDSLPGPGKLMRDAPAL 63
           SST GT+S SF   KN++IH RS TQ R++ +SN+T+ G+KMVS SLPG  K+ +DAPAL
Sbjct: 436 SSTAGTKSVSFDSEKNSNIHQRSITQERNNIKSNETKFGSKMVSSSLPGSSKVTKDAPAL 495

Query: 64  LGSKDDLASRSSTREGIVFDVTQSASKLAGNMKSFTEDVNRNKVKFQETNTSTKDVNILS 123
           LG KDDL S  +TREGIV DVT SA K      SF EDVNR K  F ET  S K+VNILS
Sbjct: 496 LGRKDDLKS-CNTREGIVLDVTPSAGK------SFHEDVNRRKAMFPETGMSAKNVNILS 548

Query: 124 SQVNPSSLTKKTAGITTQISVISQPEASGKESFQKSRITAVEGNKLSAVKVCKTTPALSS 183
           SQVNP SLT+KTA ITTQISV SQPEASGKESFQKS+IT++EGNKLS+ K CK TPA SS
Sbjct: 549 SQVNPCSLTEKTAKITTQISVNSQPEASGKESFQKSKITSIEGNKLSSFKSCKITPAFSS 608

Query: 184 LKTLRNIGANTVLATSSHQKEANSLVNSQHNKETQGITPLKNDHQTDSGDNKKLSNPFLK 243
           LKT RNIGAN+VLATS HQKEA SL +S+  KE Q I   K+DH T  GDN++ S  FLK
Sbjct: 609 LKTSRNIGANSVLATSLHQKEAKSLASSEQRKEIQTIAVSKSDHLTGGGDNQRPSATFLK 668

Query: 244 RKTIEDSEADLTSLRPLKRLSQX-XXXXXXXXXXXXXXXXXXXXXXXFLKYYSTSGVESP 302
           RK IE SEADLTSLRPLKRLSQ                            Y+STSG+ESP
Sbjct: 669 RKNIEVSEADLTSLRPLKRLSQSPIGSRNAEPKESSEKVEQVERKSSDFAYHSTSGLESP 728

Query: 303 SEIKVTEVEIPASVLMEDNSSVEKAEAYMKELEDICNMXXXXXXXXXXXXVRAIVNNNNL 362
           SEIKVTEVEIP SVLMEDNS+VEKAEAYMKELE+ICNM            VRA+VN+NNL
Sbjct: 729 SEIKVTEVEIPDSVLMEDNSNVEKAEAYMKELENICNMLKKRHEEAKELLVRAVVNDNNL 788

Query: 363 LMLNHPIYDEEIQKVQKFASQVMSEGI 389
           LMLNHPIY+E+I+KVQKFASQ+MS+ I
Sbjct: 789 LMLNHPIYEEKIRKVQKFASQMMSKEI 815


>Medtr4g087875.1 | hypothetical protein | HC |
           chr4:34582767-34574407 | 20130731
          Length = 840

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 240/380 (63%), Positives = 272/380 (71%), Gaps = 8/380 (2%)

Query: 4   SSTVGTQSFSFGCNKNADIHLRSKTQARDSFRSNDTRSGNKMVSDSLPGPGKLMRDAPAL 63
           SST GT+S SF   KN++IH RS TQ R++ +SN+T+ G+KMVS SLPG  K+ +DAPAL
Sbjct: 436 SSTAGTKSVSFDSEKNSNIHQRSITQERNNIKSNETKFGSKMVSSSLPGSSKVTKDAPAL 495

Query: 64  LGSKDDLASRSSTREGIVFDVTQSASKLAGNMKSFTEDVNRNKVKFQETNTSTKDVNILS 123
           LG KDDL S  +TREGIV DVT SA K      SF EDVNR K  F ET  S K+VNILS
Sbjct: 496 LGRKDDLKS-CNTREGIVLDVTPSAGK------SFHEDVNRRKAMFPETGMSAKNVNILS 548

Query: 124 SQVNPSSLTKKTAGITTQISVISQPEASGKESFQKSRITAVEGNKLSAVKVCKTTPALSS 183
           SQVNP SLT+KTA ITTQISV SQPEASGKESFQKS+IT++EGNKLS+ K CK TPA SS
Sbjct: 549 SQVNPCSLTEKTAKITTQISVNSQPEASGKESFQKSKITSIEGNKLSSFKSCKITPAFSS 608

Query: 184 LKTLRNIGANTVLATSSHQKEANSLVNSQHNKETQGITPLKNDHQTDSGDNKKLSNPFLK 243
           LKT RNIGAN+VLATS HQKEA SL +S+  KE Q I   K+DH T  GDN++ S  FLK
Sbjct: 609 LKTSRNIGANSVLATSLHQKEAKSLASSEQRKEIQTIAVSKSDHLTGGGDNQRPSATFLK 668

Query: 244 RKTIEDSEADLTSLRPLKRLSQX-XXXXXXXXXXXXXXXXXXXXXXXFLKYYSTSGVESP 302
           RK IE SEADLTSLRPLKRLSQ                            Y+STSG+ESP
Sbjct: 669 RKNIEVSEADLTSLRPLKRLSQSPIGSRNAEPKESSEKVEQVERKSSDFAYHSTSGLESP 728

Query: 303 SEIKVTEVEIPASVLMEDNSSVEKAEAYMKELEDICNMXXXXXXXXXXXXVRAIVNNNNL 362
           SEIKVTEVEIP SVLMEDNS+VEKAEAYMKELE+ICNM            VRA+VN+NNL
Sbjct: 729 SEIKVTEVEIPDSVLMEDNSNVEKAEAYMKELENICNMLKKRHEEAKELLVRAVVNDNNL 788

Query: 363 LMLNHPIYDEEIQKVQKFAS 382
           LMLNHPIY+E+I     F S
Sbjct: 789 LMLNHPIYEEKISFHSSFQS 808