Miyakogusa Predicted Gene
- Lj4g3v0473650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0473650.1 tr|Q5QMQ5|Q5QMQ5_ORYSJ Homeobox transcription
factor-like OS=Oryza sativa subsp. japonica
GN=P0007F0,65.08,5e-17,seg,NULL; coiled-coil,NULL;
Homeodomain,Homeodomain; Homeodomain-like,Homeodomain-like;
Homeobox,Hom,NODE_60549_length_1598_cov_46.536922.path1.1
(428 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g014490.1 | homeobox domain protein | HC | chr2:4156582-41... 396 e-110
Medtr2g014490.2 | homeobox domain protein | HC | chr2:4157060-41... 395 e-110
Medtr4g088375.1 | homeobox domain protein | HC | chr4:34983103-3... 382 e-106
Medtr4g088375.4 | homeobox domain protein | HC | chr4:34983006-3... 342 6e-94
Medtr4g088375.2 | homeobox domain protein | HC | chr4:34983103-3... 342 6e-94
Medtr4g078860.1 | homeodomain transcriptional regulator | HC | c... 144 1e-34
Medtr4g078860.3 | homeodomain transcriptional regulator | HC | c... 143 3e-34
Medtr4g078860.2 | homeodomain transcriptional regulator | HC | c... 143 4e-34
Medtr4g078860.4 | homeodomain transcriptional regulator | HC | c... 140 2e-33
Medtr4g088375.3 | homeobox domain protein | HC | chr4:34983103-3... 103 4e-22
Medtr3g045830.1 | homeobox leucine zipper protein | HC | chr3:15... 75 2e-13
Medtr5g089870.1 | homeobox leucine zipper protein | HC | chr5:39... 73 5e-13
>Medtr2g014490.1 | homeobox domain protein | HC |
chr2:4156582-4148228 | 20130731
Length = 1796
Score = 396 bits (1017), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/387 (56%), Positives = 256/387 (66%), Gaps = 38/387 (9%)
Query: 33 KIANSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCH 92
KI +S++GQ KPKRQMKTPFQLE LEKAYAL+ +PSE R+ELS+KLGL DRQLQMWFCH
Sbjct: 31 KIVSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCH 90
Query: 93 RRLKDKKEMALKKQPQKVEVEPLPDSPVD--NLRLGPELXXXXXXXXXXXXXPFTRLEPR 150
RRLKDKKE+ +KK + PL DSP N +L E PF R E R
Sbjct: 91 RRLKDKKELPVKKARK---APPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTELR 147
Query: 151 NGVSRGMP---GYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFGTPI 207
N V P YYESPQ +ME RAIACVEAQLGEPLR+DGP LG+EFDPLPP AFG P+
Sbjct: 148 NVV----PPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPL 203
Query: 208 AVTEHQKLPSPSYDSKIYGRHDVRTNKAMAKTF--------QSRSRPDAFGQFRQSHLHD 259
AV E QK PS +YDSKIY RH+VRTNKAMA+TF Q R D FGQ Q HL+D
Sbjct: 204 AVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYD 263
Query: 260 LMEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLS-----------------SQQDRQGSS 302
ME PAR P E LPRIH TQ QSSR RLS SQQD+Q
Sbjct: 264 PMEGPARTPPFPIGNEHLPRIHGTQSQSSRARLSSQHDKPVTPYTSPPPFLSQQDKQSIP 323
Query: 303 FQSPPLPDDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALPSGQLLH-DNAVRIDRK 361
+ SPP +DV P E + NI N G+NS FTDHQ+ G EN ALP GQ+ H D +R+++K
Sbjct: 324 YPSPPRDNDVVPKREPHPNIANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKK 383
Query: 362 RKSDDPRSAKDVEAHEIKIRKELEKQE 388
RK+DD R K+VEA+EI+++KELEKQ+
Sbjct: 384 RKTDDARVVKEVEAYEIRMKKELEKQD 410
>Medtr2g014490.2 | homeobox domain protein | HC |
chr2:4157060-4148227 | 20130731
Length = 1807
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 219/387 (56%), Positives = 256/387 (66%), Gaps = 38/387 (9%)
Query: 33 KIANSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCH 92
KI +S++GQ KPKRQMKTPFQLE LEKAYAL+ +PSE R+ELS+KLGL DRQLQMWFCH
Sbjct: 31 KIVSSSEGQSKPKRQMKTPFQLEMLEKAYALETYPSETTRIELSEKLGLSDRQLQMWFCH 90
Query: 93 RRLKDKKEMALKKQPQKVEVEPLPDSPVD--NLRLGPELXXXXXXXXXXXXXPFTRLEPR 150
RRLKDKKE+ +KK + PL DSP N +L E PF R E R
Sbjct: 91 RRLKDKKELPVKKARK---APPLLDSPTHEPNPKLILEPCNEYGSGSGSGSSPFARTELR 147
Query: 151 NGVSRGMP---GYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFGTPI 207
N V P YYESPQ +ME RAIACVEAQLGEPLR+DGP LG+EFDPLPP AFG P+
Sbjct: 148 NVV----PPPRSYYESPQTIMELRAIACVEAQLGEPLREDGPILGIEFDPLPPDAFGAPL 203
Query: 208 AVTEHQKLPSPSYDSKIYGRHDVRTNKAMAKTF--------QSRSRPDAFGQFRQSHLHD 259
AV E QK PS +YDSKIY RH+VRTNKAMA+TF Q R D FGQ Q HL+D
Sbjct: 204 AVAEQQKRPSLAYDSKIYERHEVRTNKAMARTFPEYPFVPNQPSIRSDMFGQLSQPHLYD 263
Query: 260 LMEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLS-----------------SQQDRQGSS 302
ME PAR P E LPRIH TQ QSSR RLS SQQD+Q
Sbjct: 264 PMEGPARTPPFPIGNEHLPRIHGTQSQSSRARLSSQHDKPVTPYTSPPPFLSQQDKQSIP 323
Query: 303 FQSPPLPDDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALPSGQLLH-DNAVRIDRK 361
+ SPP +DV P E + NI N G+NS FTDHQ+ G EN ALP GQ+ H D +R+++K
Sbjct: 324 YPSPPRDNDVVPKREPHPNIANTGINSQFTDHQIGGQENPLALPGGQVFHNDTVLRVEKK 383
Query: 362 RKSDDPRSAKDVEAHEIKIRKELEKQE 388
RK+DD R K+VEA+EI+++KELEKQ+
Sbjct: 384 RKTDDARVVKEVEAYEIRMKKELEKQD 410
>Medtr4g088375.1 | homeobox domain protein | HC |
chr4:34983103-34993442 | 20130731
Length = 1717
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 213/376 (56%), Positives = 254/376 (67%), Gaps = 42/376 (11%)
Query: 12 NRKRGSADDNSDENRNEGSNSKIANSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEV 71
+RKRG ADD KIA S +GQ KPKRQMKTPFQLETLEKAYALD +PSE V
Sbjct: 12 DRKRGGADDG-----------KIAVSTEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPV 60
Query: 72 RVELSQKLGLLDRQLQMWFCHRRLKDKKEMALKKQ--PQKVEVEPLPDSPVDNLRLGPEL 129
R++LS+KLGL DRQLQMWFCHRRLKDKKE A KK P+K V+PLPDSPVD+ R+G E
Sbjct: 61 RIDLSEKLGLTDRQLQMWFCHRRLKDKKESAPKKVVPPRKPVVQPLPDSPVDDHRMGFEH 120
Query: 130 XXXXXXXXXXXXXPFTRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGP 189
P LEPRN ++ + GYYESP ME +AIACVE QLGEPLR+D P
Sbjct: 121 GNEYDSGSGSGSSP--GLEPRNAMALSV-GYYESPHDEMELKAIACVEDQLGEPLREDAP 177
Query: 190 TLGVEFDPLPPGAFGTPIAVTEHQKLPSPSYDSKIYGRHDVRTNKAMAKTF------QSR 243
+GVEFDPLPP AFG I VTE QK P +YD KIYGRHDV+T+KA A+TF +S
Sbjct: 178 IIGVEFDPLPPDAFGALI-VTERQKRPRLAYDGKIYGRHDVKTDKAKARTFHEYLPSKSG 236
Query: 244 SRPDAFGQFRQSHLHDLMEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLSSQQDRQGSSF 303
R DAFGQF QSH+H M+ P++ P + +PR H QG SSRV + SQQ +QGS +
Sbjct: 237 IRSDAFGQFSQSHVHVPMQGPSKTPPI------VPRNHAAQGHSSRVPILSQQGKQGSPY 290
Query: 304 QSPPLPDDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALPSGQLLHDNAVRIDRKRK 363
QSPP EL TNI + GMNSH ++ PEN YA PSGQ+L +NA+ I+RKRK
Sbjct: 291 QSPP--------RELATNIVSAGMNSH-----LIEPENPYASPSGQILQNNAMHIERKRK 337
Query: 364 SDDPRSAKDVEAHEIK 379
DD + +DVE HE++
Sbjct: 338 GDDAKITRDVEGHELE 353
>Medtr4g088375.4 | homeobox domain protein | HC |
chr4:34983006-34993442 | 20130731
Length = 1682
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 233/370 (62%), Gaps = 64/370 (17%)
Query: 12 NRKRGSADDNSDENRNEGSNSKIANSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEV 71
+RKRG ADD KIA S +GQ KPKRQMKTPFQLETLEKAYALD +PSE V
Sbjct: 12 DRKRGGADDG-----------KIAVSTEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPV 60
Query: 72 RVELSQKLGLLDRQLQMWFCHRRLKDKKEMALKKQ--PQKVEVEPLPDSPVDNLRLGPEL 129
R++LS+KLGL DRQLQMWFCHRRLKDKKE A KK P+K V+PLPDSPVD+ R+G E
Sbjct: 61 RIDLSEKLGLTDRQLQMWFCHRRLKDKKESAPKKVVPPRKPVVQPLPDSPVDDHRMGFEH 120
Query: 130 XXXXXXXXXXXXXPFTRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGP 189
P LEPRN ++ + GYYESP ME +AIACVE QLGEPLR+D P
Sbjct: 121 GNEYDSGSGSGSSP--GLEPRNAMALSV-GYYESPHDEMELKAIACVEDQLGEPLREDAP 177
Query: 190 TLGVEFDPLPPGAFGTPIAVTEHQKLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAF 249
+GVEFDPLPP AFG I VTE QK P +YD KIYGRHDV+T+K
Sbjct: 178 IIGVEFDPLPPDAFGALI-VTERQKRPRLAYDGKIYGRHDVKTDKG-------------- 222
Query: 250 GQFRQSHLHDLMEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLSSQQDRQGSSFQSPPLP 309
P++ P + +PR H QG SSRV + SQQ +QGS +QSPP
Sbjct: 223 --------------PSKTPPI------VPRNHAAQGHSSRVPILSQQGKQGSPYQSPP-- 260
Query: 310 DDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALPSGQLLHDNAVRIDRKRKSDDPRS 369
EL TNI + GMNSH ++ PEN YA PSGQ+L +NA+ I+RKRK DD +
Sbjct: 261 ------RELATNIVSAGMNSH-----LIEPENPYASPSGQILQNNAMHIERKRKGDDAKI 309
Query: 370 AKDVEAHEIK 379
+DVE HE++
Sbjct: 310 TRDVEGHELE 319
>Medtr4g088375.2 | homeobox domain protein | HC |
chr4:34983103-34993442 | 20130731
Length = 1683
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 196/370 (52%), Positives = 233/370 (62%), Gaps = 64/370 (17%)
Query: 12 NRKRGSADDNSDENRNEGSNSKIANSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEV 71
+RKRG ADD KIA S +GQ KPKRQMKTPFQLETLEKAYALD +PSE V
Sbjct: 12 DRKRGGADDG-----------KIAVSTEGQSKPKRQMKTPFQLETLEKAYALDNYPSEPV 60
Query: 72 RVELSQKLGLLDRQLQMWFCHRRLKDKKEMALKKQ--PQKVEVEPLPDSPVDNLRLGPEL 129
R++LS+KLGL DRQLQMWFCHRRLKDKKE A KK P+K V+PLPDSPVD+ R+G E
Sbjct: 61 RIDLSEKLGLTDRQLQMWFCHRRLKDKKESAPKKVVPPRKPVVQPLPDSPVDDHRMGFEH 120
Query: 130 XXXXXXXXXXXXXPFTRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGP 189
P LEPRN ++ + GYYESP ME +AIACVE QLGEPLR+D P
Sbjct: 121 GNEYDSGSGSGSSP--GLEPRNAMALSV-GYYESPHDEMELKAIACVEDQLGEPLREDAP 177
Query: 190 TLGVEFDPLPPGAFGTPIAVTEHQKLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAF 249
+GVEFDPLPP AFG I VTE QK P +YD KIYGRHDV+T+K
Sbjct: 178 IIGVEFDPLPPDAFGALI-VTERQKRPRLAYDGKIYGRHDVKTDKG-------------- 222
Query: 250 GQFRQSHLHDLMEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLSSQQDRQGSSFQSPPLP 309
P++ P + +PR H QG SSRV + SQQ +QGS +QSPP
Sbjct: 223 --------------PSKTPPI------VPRNHAAQGHSSRVPILSQQGKQGSPYQSPP-- 260
Query: 310 DDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALPSGQLLHDNAVRIDRKRKSDDPRS 369
EL TNI + GMNSH ++ PEN YA PSGQ+L +NA+ I+RKRK DD +
Sbjct: 261 ------RELATNIVSAGMNSH-----LIEPENPYASPSGQILQNNAMHIERKRKGDDAKI 309
Query: 370 AKDVEAHEIK 379
+DVE HE++
Sbjct: 310 TRDVEGHELE 319
>Medtr4g078860.1 | homeodomain transcriptional regulator | HC |
chr4:30499257-30483381 | 20130731
Length = 1763
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 188/383 (49%), Gaps = 48/383 (12%)
Query: 41 QGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRLKDKKE 100
+ + KR+ KTP QLE LEK YA++ +PSE R EL+ KLGL DRQLQMWFCHRR KD+K
Sbjct: 18 ENRVKRKKKTPSQLEILEKTYAMETYPSEATRGELAVKLGLSDRQLQMWFCHRRQKDRKA 77
Query: 101 MA--------LKKQPQKVEVEPLPDS--------PVDNLRLGPELXXXXXXXXXXXXXPF 144
+A ++ K+EV + + P+ + L +
Sbjct: 78 VAPAGPSSVPMRDGVVKIEVTDVRNVSDFVSDLRPIGGMDLLGVVPLHEVMGFRRMGAAL 137
Query: 145 TRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFG 204
+ ++ + +E Q + E +AIA VE+QLGE LRDDGP LG+EFD +P GAFG
Sbjct: 138 SEMDSSSS--------HEPHQTLHELQAIAFVESQLGESLRDDGPILGMEFDSVPLGAFG 189
Query: 205 TPI-AVTEHQ-KLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAFGQFRQS-----HL 257
P+ AV Q + P S ++K+Y D +K + + +P + + H
Sbjct: 190 APLEAVAVGQCRQPELSVEAKVYESLDKGVSKILHEYQFIPEQPTVKNEISERVTTAIHF 249
Query: 258 HDLMEDPARNPSV---APVL---EQLPRIHVTQGQSS-RVRLSSQQDRQGSSFQSPPLP- 309
L P S+ A L E ++ QGQ + L SQ + S+ P
Sbjct: 250 SSLGGVPHSRTSLSSGAYFLNGNESAHNVYGVQGQKIPDLNLLSQSHQGRSNHLMPSASG 309
Query: 310 --DDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALP-SGQLLHDNAV-RIDRKRKSD 365
DDV P + ++T + + HQ V P++ +P +++H+ R RKRK++
Sbjct: 310 GNDDV-PRMNPFVDVT---LETQMRAHQ-VTPKDGGLVPFDSRVIHEEEFSRFQRKRKNE 364
Query: 366 DPRSAKDVEAHEIKIRKELEKQE 388
+ R +++E E +IRKEL KQE
Sbjct: 365 EARMQRELEVQEKRIRKELVKQE 387
>Medtr4g078860.3 | homeodomain transcriptional regulator | HC |
chr4:30499085-30486036 | 20130731
Length = 1413
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 188/383 (49%), Gaps = 48/383 (12%)
Query: 41 QGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRLKDKKE 100
+ + KR+ KTP QLE LEK YA++ +PSE R EL+ KLGL DRQLQMWFCHRR KD+K
Sbjct: 18 ENRVKRKKKTPSQLEILEKTYAMETYPSEATRGELAVKLGLSDRQLQMWFCHRRQKDRKA 77
Query: 101 MA--------LKKQPQKVEVEPLPDS--------PVDNLRLGPELXXXXXXXXXXXXXPF 144
+A ++ K+EV + + P+ + L +
Sbjct: 78 VAPAGPSSVPMRDGVVKIEVTDVRNVSDFVSDLRPIGGMDLLGVVPLHEVMGFRRMGAAL 137
Query: 145 TRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFG 204
+ ++ + +E Q + E +AIA VE+QLGE LRDDGP LG+EFD +P GAFG
Sbjct: 138 SEMDSSSS--------HEPHQTLHELQAIAFVESQLGESLRDDGPILGMEFDSVPLGAFG 189
Query: 205 TPI-AVTEHQ-KLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAFGQFRQS-----HL 257
P+ AV Q + P S ++K+Y D +K + + +P + + H
Sbjct: 190 APLEAVAVGQCRQPELSVEAKVYESLDKGVSKILHEYQFIPEQPTVKNEISERVTTAIHF 249
Query: 258 HDLMEDPARNPSV---APVL---EQLPRIHVTQGQSS-RVRLSSQQDRQGSSFQSPPLP- 309
L P S+ A L E ++ QGQ + L SQ + S+ P
Sbjct: 250 SSLGGVPHSRTSLSSGAYFLNGNESAHNVYGVQGQKIPDLNLLSQSHQGRSNHLMPSASG 309
Query: 310 --DDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALP-SGQLLHDNAV-RIDRKRKSD 365
DDV P + ++T + + HQ V P++ +P +++H+ R RKRK++
Sbjct: 310 GNDDV-PRMNPFVDVT---LETQMRAHQ-VTPKDGGLVPFDSRVIHEEEFSRFQRKRKNE 364
Query: 366 DPRSAKDVEAHEIKIRKELEKQE 388
+ R +++E E +IRKEL KQE
Sbjct: 365 EARMQRELEVQEKRIRKELVKQE 387
>Medtr4g078860.2 | homeodomain transcriptional regulator | HC |
chr4:30499257-30483381 | 20130731
Length = 1513
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 125/383 (32%), Positives = 188/383 (49%), Gaps = 48/383 (12%)
Query: 41 QGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRLKDKKE 100
+ + KR+ KTP QLE LEK YA++ +PSE R EL+ KLGL DRQLQMWFCHRR KD+K
Sbjct: 18 ENRVKRKKKTPSQLEILEKTYAMETYPSEATRGELAVKLGLSDRQLQMWFCHRRQKDRKA 77
Query: 101 MA--------LKKQPQKVEVEPLPDS--------PVDNLRLGPELXXXXXXXXXXXXXPF 144
+A ++ K+EV + + P+ + L +
Sbjct: 78 VAPAGPSSVPMRDGVVKIEVTDVRNVSDFVSDLRPIGGMDLLGVVPLHEVMGFRRMGAAL 137
Query: 145 TRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFG 204
+ ++ + +E Q + E +AIA VE+QLGE LRDDGP LG+EFD +P GAFG
Sbjct: 138 SEMDSSSS--------HEPHQTLHELQAIAFVESQLGESLRDDGPILGMEFDSVPLGAFG 189
Query: 205 TPI-AVTEHQ-KLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAFGQFRQS-----HL 257
P+ AV Q + P S ++K+Y D +K + + +P + + H
Sbjct: 190 APLEAVAVGQCRQPELSVEAKVYESLDKGVSKILHEYQFIPEQPTVKNEISERVTTAIHF 249
Query: 258 HDLMEDPARNPSV---APVL---EQLPRIHVTQGQSS-RVRLSSQQDRQGSSFQSPPLP- 309
L P S+ A L E ++ QGQ + L SQ + S+ P
Sbjct: 250 SSLGGVPHSRTSLSSGAYFLNGNESAHNVYGVQGQKIPDLNLLSQSHQGRSNHLMPSASG 309
Query: 310 --DDVNPLAELYTNITNGGMNSHFTDHQMVGPENAYALP-SGQLLHDNAV-RIDRKRKSD 365
DDV P + ++T + + HQ V P++ +P +++H+ R RKRK++
Sbjct: 310 GNDDV-PRMNPFVDVT---LETQMRAHQ-VTPKDGGLVPFDSRVIHEEEFSRFQRKRKNE 364
Query: 366 DPRSAKDVEAHEIKIRKELEKQE 388
+ R +++E E +IRKEL KQE
Sbjct: 365 EARMQRELEVQEKRIRKELVKQE 387
>Medtr4g078860.4 | homeodomain transcriptional regulator | HC |
chr4:30499257-30483381 | 20130731
Length = 1737
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/370 (31%), Positives = 180/370 (48%), Gaps = 48/370 (12%)
Query: 41 QGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRLKDKKE 100
+ + KR+ KTP QLE LEK YA++ +PSE R EL+ KLGL DRQLQMWFCHRR KD+K
Sbjct: 18 ENRVKRKKKTPSQLEILEKTYAMETYPSEATRGELAVKLGLSDRQLQMWFCHRRQKDRKA 77
Query: 101 MA--------LKKQPQKVEVEPLPDS--------PVDNLRLGPELXXXXXXXXXXXXXPF 144
+A ++ K+EV + + P+ + L +
Sbjct: 78 VAPAGPSSVPMRDGVVKIEVTDVRNVSDFVSDLRPIGGMDLLGVVPLHEVMGFRRMGAAL 137
Query: 145 TRLEPRNGVSRGMPGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAFG 204
+ ++ + +E Q + E +AIA VE+QLGE LRDDGP LG+EFD +P GAFG
Sbjct: 138 SEMDSSSS--------HEPHQTLHELQAIAFVESQLGESLRDDGPILGMEFDSVPLGAFG 189
Query: 205 TPI-AVTEHQ-KLPSPSYDSKIYGRHDVRTNKAMAKTFQSRSRPDAFGQF--RQSHLHDL 260
P+ AV Q + P S ++K+Y D K ++K QF Q + +
Sbjct: 190 APLEAVAVGQCRQPELSVEAKVYESLD----KGVSKILHEY-------QFIPEQPTVKNE 238
Query: 261 MEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLSSQQDRQGSSFQSPPLPDDVNPLAELYT 320
+ + L +P H SS + + + + DDV P +
Sbjct: 239 ISERVTTAIHFSSLGGVP--HSRTSLSSGAYFLNGNESAHNVYGVQGGNDDV-PRMNPFV 295
Query: 321 NITNGGMNSHFTDHQMVGPENAYALP-SGQLLHDNAV-RIDRKRKSDDPRSAKDVEAHEI 378
++T + + HQ V P++ +P +++H+ R RKRK+++ R +++E E
Sbjct: 296 DVT---LETQMRAHQ-VTPKDGGLVPFDSRVIHEEEFSRFQRKRKNEEARMQRELEVQEK 351
Query: 379 KIRKELEKQE 388
+IRKEL KQE
Sbjct: 352 RIRKELVKQE 361
>Medtr4g088375.3 | homeobox domain protein | HC |
chr4:34983103-34993442 | 20130731
Length = 1464
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/119 (47%), Positives = 75/119 (63%), Gaps = 19/119 (15%)
Query: 261 MEDPARNPSVAPVLEQLPRIHVTQGQSSRVRLSSQQDRQGSSFQSPPLPDDVNPLAELYT 320
M+ P++ P + +PR H QG SSRV + SQQ +QGS +QSPP EL T
Sbjct: 1 MQGPSKTPPI------VPRNHAAQGHSSRVPILSQQGKQGSPYQSPP--------RELAT 46
Query: 321 NITNGGMNSHFTDHQMVGPENAYALPSGQLLHDNAVRIDRKRKSDDPRSAKDVEAHEIK 379
NI + GMNSH ++ PEN YA PSGQ+L +NA+ I+RKRK DD + +DVE HE++
Sbjct: 47 NIVSAGMNSH-----LIEPENPYASPSGQILQNNAMHIERKRKGDDAKITRDVEGHELE 100
>Medtr3g045830.1 | homeobox leucine zipper protein | HC |
chr3:15030477-15035870 | 20130731
Length = 507
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 36 NSNDGQGKPKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRL 95
N+ + KR++KTP QL LE Y K+P+EE++VEL+ +L L ++Q+ WFCHRRL
Sbjct: 12 NTTSTEKNSKRKLKTPAQLMALENFYNEHKYPTEEMKVELANELALTEKQISGWFCHRRL 71
Query: 96 KDKKEM 101
KDK+ M
Sbjct: 72 KDKRLM 77
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 158 PGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAF----GTPIAVTEHQ 213
P Y + +E AI V+ +LG +DGP L V+FD +PPGAF P+ T H
Sbjct: 199 PSGYLKVKKEIEHAAITAVKNRLGRHFLEDGPLLNVDFDTIPPGAFEFQTANPVNETYHV 258
Query: 214 KLPS---------PSYDSKIYGRHDVRTNKAMAKTFQSR 243
PS P+ S + D+ NK ++ FQ +
Sbjct: 259 ANPSLSNSPEDCAPNRQSCLNSSIDLYMNKLSSQDFQDK 297
>Medtr5g089870.1 | homeobox leucine zipper protein | HC |
chr5:39090039-39096030 | 20130731
Length = 544
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 45/56 (80%)
Query: 44 PKRQMKTPFQLETLEKAYALDKFPSEEVRVELSQKLGLLDRQLQMWFCHRRLKDKK 99
PKR++KTP QL+ LEK Y K+P+EE+++ ++++L L ++Q+ WFCHRRLKDK+
Sbjct: 20 PKRKLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELELTEKQVSGWFCHRRLKDKR 75
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 147 LEPRNGVSRGM-PGYYESPQAVMERRAIACVEAQLGEPLRDDGPTLGVEFDPLPPGAF 203
L P+ ++ G P Y + +E AI V+ QLG ++DGP LGVEFDPLPPGAF
Sbjct: 190 LNPKGAINMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYQEDGPLLGVEFDPLPPGAF 247