Miyakogusa Predicted Gene

Lj4g3v0473390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0473390.1 Non Characterized Hit- tr|I3SML4|I3SML4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,39.22,0.000005,
,CUFF.47362.1
         (95 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g059025.1 | animal RPA1 domain protein | LC | chr8:2054987...    51   3e-07

>Medtr8g059025.1 | animal RPA1 domain protein | LC |
          chr8:20549873-20550376 | 20130731
          Length = 138

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 33/48 (68%)

Query: 44 MNGGFNSIKSLIPGKDLWRVKVRVLEVWELCTVGEPMNPFGIQMVLLD 91
          M+  F+S+  ++P +D WR+KVR+L +WE+ T+  P     ++MVL+D
Sbjct: 1  MDRSFDSLSEIVPDRDGWRIKVRILRLWEVPTLLRPDQTNSLEMVLID 48