Miyakogusa Predicted Gene

Lj4g3v0462780.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0462780.1 Non Characterized Hit- tr|K4DH67|K4DH67_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,52.48,4e-18,DUF1764,Protein of unknown function DUF1764,
eukaryotic; seg,NULL,CUFF.47314.1
         (121 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g088585.2 | DUF1764 domain protein | HC | chr4:35209965-35...    72   1e-13
Medtr4g088585.1 | DUF1764 domain protein | HC | chr4:35210490-35...    71   2e-13

>Medtr4g088585.2 | DUF1764 domain protein | HC |
           chr4:35209965-35211394 | 20130731
          Length = 123

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 54/123 (43%), Gaps = 2/123 (1%)

Query: 1   MTKKSSKKTPSQLQENIVVEEE-KPSAVPKKASNEIDEIFAGXXXXXXXXXXXXXXXXXX 59
           MT K S  TP +LQEN  ++EE KPS+ PKK  +EIDEIFAG                  
Sbjct: 1   MTNKKSPTTPKKLQENNAIKEEPKPSSAPKKTVSEIDEIFAGKKRKKSDVKKTGKAREAT 60

Query: 60  XXXXXXXXXXXXXXXXXX-XXXXSRPRKKTXXXXXXXXXXXXXXNKQDAGGTPLCPFDCS 118
                                  SR RKKT              +K DAG TPLCPFDCS
Sbjct: 61  KSNDKTNKKKPKRLDESEFVDRPSRSRKKTEDGLTIYTEEELGLSKGDAGNTPLCPFDCS 120

Query: 119 CCF 121
           CCF
Sbjct: 121 CCF 123


>Medtr4g088585.1 | DUF1764 domain protein | HC |
           chr4:35210490-35211326 | 20130731
          Length = 132

 Score = 71.2 bits (173), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 54/123 (43%), Gaps = 2/123 (1%)

Query: 1   MTKKSSKKTPSQLQENIVVEEE-KPSAVPKKASNEIDEIFAGXXXXXXXXXXXXXXXXXX 59
           MT K S  TP +LQEN  ++EE KPS+ PKK  +EIDEIFAG                  
Sbjct: 10  MTNKKSPTTPKKLQENNAIKEEPKPSSAPKKTVSEIDEIFAGKKRKKSDVKKTGKAREAT 69

Query: 60  XXXXXXXXXX-XXXXXXXXXXXXSRPRKKTXXXXXXXXXXXXXXNKQDAGGTPLCPFDCS 118
                                  SR RKKT              +K DAG TPLCPFDCS
Sbjct: 70  KSNDKTNKKKPKRLDESEFVDRPSRSRKKTEDGLTIYTEEELGLSKGDAGNTPLCPFDCS 129

Query: 119 CCF 121
           CCF
Sbjct: 130 CCF 132