Miyakogusa Predicted Gene

Lj4g3v0451300.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0451300.2 Non Characterized Hit- tr|I1M0A6|I1M0A6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=3,89.35,0,no
description,NULL; P-loop containing nucleoside triphosphate
hydrolases,NULL; GTP-BINDING PROTEIN ,CUFF.47271.2
         (217 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g088800.1 | P-loop nucleoside triphosphate hydrolase super...   425   e-119
Medtr3g109540.1 | ribosome biogenesis GTP-binding protein YsxC |...   281   3e-76
Medtr3g466440.1 | GTP-binding protein EngB, putative | HC | chr3...    96   3e-20
Medtr3g466440.2 | GTP-binding protein EngB, putative | HC | chr3...    96   3e-20

>Medtr4g088800.1 | P-loop nucleoside triphosphate hydrolase
           superfamily protein | HC | chr4:35404838-35407436 |
           20130731
          Length = 297

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 202/217 (93%), Positives = 211/217 (97%)

Query: 1   MILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLV 60
           MILP SNIVVGPYAGDSRIKDVEFVKSSP+A+DCPKD RPEFAVLGRSNVGKSSLINSLV
Sbjct: 79  MILPFSNIVVGPYAGDSRIKDVEFVKSSPKAKDCPKDHRPEFAVLGRSNVGKSSLINSLV 138

Query: 61  RKKELALTSKRPGKTQLINHFLVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRN 120
           RKKELALTSK+PGKTQLINHFLVNK WYLVDLPGYGFAKASEAAK DW+SFTKGYFLNR+
Sbjct: 139 RKKELALTSKKPGKTQLINHFLVNKKWYLVDLPGYGFAKASEAAKVDWSSFTKGYFLNRD 198

Query: 121 TLVAVLLLIDASVPPQRIDLDCANWLGRNNIPVTFVFTKCDKMKVAKGKRPDENIKEFQE 180
           TLVAVLLLIDASVPPQRID DCANWLGRNNIPVTFVFTKCDKMKVAKGK P+ENI++FQE
Sbjct: 199 TLVAVLLLIDASVPPQRIDFDCANWLGRNNIPVTFVFTKCDKMKVAKGKIPEENIRDFQE 258

Query: 181 IIKQNFKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 217
           IIKQN+KQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW
Sbjct: 259 IIKQNYKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 295


>Medtr3g109540.1 | ribosome biogenesis GTP-binding protein YsxC | HC
           | chr3:50687042-50683808 | 20130731
          Length = 301

 Score =  281 bits (719), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 137/218 (62%), Positives = 173/218 (79%), Gaps = 2/218 (0%)

Query: 2   ILPASNIVVGPYAGDSRIKDVEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVR 61
           IL  SNI++  YA D++I   +FVKSS R  DCP D  PEFA++GRSNVGKSSL+NS+VR
Sbjct: 81  ILNGSNILLSNYANDAQIIQADFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSIVR 140

Query: 62  KKELALTSKRPGKTQLINHFLVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNT 121
           +K+LALTSK+PGKTQLINHF VN SWYLVDLPGYG+A A +  + DWA FTK YFLNR+T
Sbjct: 141 RKKLALTSKKPGKTQLINHFRVNDSWYLVDLPGYGYASAPQELRMDWAKFTKDYFLNRST 200

Query: 122 LVAVLLLIDASVPPQRIDLDCANWLGRNNIPVTFVFT--KCDKMKVAKGKRPDENIKEFQ 179
           LV+V LLIDAS+P ++IDL+ A WLG N IP+T +FT     K K   GKRP++N+ +FQ
Sbjct: 201 LVSVFLLIDASIPARKIDLEYAAWLGENKIPMTLIFTKCDKRKKKKNGGKRPEDNVNDFQ 260

Query: 180 EIIKQNFKQHPPWIMTSSVTGLGRDDLLLHVSQLRNYW 217
           E+I+ +F+  PPWIMTS+VT  GRD++LLH++QLRNYW
Sbjct: 261 ELIRGSFETVPPWIMTSNVTHQGRDEILLHMAQLRNYW 298


>Medtr3g466440.1 | GTP-binding protein EngB, putative | HC |
           chr3:27296439-27291356 | 20130731
          Length = 664

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 9/184 (4%)

Query: 22  VEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVRKKELALTSKRPGKTQLINHF 81
           +EF  ++  +   P  + PE A  G+SNVGKSSL+N+L R+  +  TS +PG TQ IN F
Sbjct: 471 LEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVVRTSDKPGHTQTINFF 530

Query: 82  LVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNTLVAVLLLIDASVPPQRIDLD 141
            +     LVDLPGYGFA A +  K  W    K Y   R  L  V LLID     +  D++
Sbjct: 531 NLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVSTRVGLKQVCLLIDTKWGMKPRDIE 590

Query: 142 CANWLGRNNIPVTFVFTKCDK---MKVAKGKRPDENIKEFQEIIKQNFKQHPPWIMTSSV 198
             + + R+      V TK D    + VA+         + +E +  N     P +M SS 
Sbjct: 591 LIDLMERSKTKYQIVLTKTDTVFPIDVAR------RAMQIEESLLPNKSVIQPLMMASSK 644

Query: 199 TGLG 202
           +G G
Sbjct: 645 SGAG 648


>Medtr3g466440.2 | GTP-binding protein EngB, putative | HC |
           chr3:27296439-27291356 | 20130731
          Length = 664

 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 9/184 (4%)

Query: 22  VEFVKSSPRARDCPKDDRPEFAVLGRSNVGKSSLINSLVRKKELALTSKRPGKTQLINHF 81
           +EF  ++  +   P  + PE A  G+SNVGKSSL+N+L R+  +  TS +PG TQ IN F
Sbjct: 471 LEFFAAAKVSSSFPPPNLPEIAFAGKSNVGKSSLLNALTRQWGVVRTSDKPGHTQTINFF 530

Query: 82  LVNKSWYLVDLPGYGFAKASEAAKTDWASFTKGYFLNRNTLVAVLLLIDASVPPQRIDLD 141
            +     LVDLPGYGFA A +  K  W    K Y   R  L  V LLID     +  D++
Sbjct: 531 NLGTKLSLVDLPGYGFAYAKDEVKEAWEDLVKEYVSTRVGLKQVCLLIDTKWGMKPRDIE 590

Query: 142 CANWLGRNNIPVTFVFTKCDK---MKVAKGKRPDENIKEFQEIIKQNFKQHPPWIMTSSV 198
             + + R+      V TK D    + VA+         + +E +  N     P +M SS 
Sbjct: 591 LIDLMERSKTKYQIVLTKTDTVFPIDVAR------RAMQIEESLLPNKSVIQPLMMASSK 644

Query: 199 TGLG 202
           +G G
Sbjct: 645 SGAG 648