Miyakogusa Predicted Gene
- Lj4g3v0451150.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0451150.1 tr|F2DQ57|F2DQ57_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,50,4e-19,ZF_RING_1,Zinc
finger, RING-type, conserved site; zf-C3HC4_2,NULL; ZF_RING_2,Zinc
finger, RING-type;,CUFF.47260.1
(221 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 230 6e-61
Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protei... 191 3e-49
Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 191 3e-49
Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protei... 191 3e-49
Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 163 1e-40
Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 121 4e-28
Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protei... 117 6e-27
Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein ... 114 8e-26
Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein ... 113 2e-25
Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein ... 113 2e-25
Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein ... 113 2e-25
Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein ... 97 2e-20
Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein ... 97 2e-20
Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein ... 97 2e-20
Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein ... 97 2e-20
Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein ... 94 1e-19
Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein ... 93 2e-19
Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein ... 93 2e-19
Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein ... 92 3e-19
Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein ... 91 8e-19
Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein ... 91 9e-19
Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein ... 89 3e-18
Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein ... 89 3e-18
Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein ... 86 2e-17
Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein ... 79 3e-15
Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC | chr1:38... 61 1e-09
Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370... 49 3e-06
>Medtr4g088875.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35472873-35474936 | 20130731
Length = 231
Score = 230 bits (587), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 148/223 (66%), Gaps = 22/223 (9%)
Query: 1 MAFEH--YLTQEWE-----GSETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYK 53
MAFEH + TQEW+ G+ETE +CD FDCNICL+FAHEPVVTLCGHLYCW CIYK
Sbjct: 1 MAFEHEDFFTQEWKAIPNSGTETEK-NCDSCFDCNICLDFAHEPVVTLCGHLYCWSCIYK 59
Query: 54 WLYVQSASLAPDEPPQCPVCKDGISHTTMVPLYGRGPS------DSNLKVQHKDVLIPPR 107
WL+VQSASLAPDEPPQCPVCKDGISHT MVPLYGRG + DS+ K +D+ IPPR
Sbjct: 60 WLFVQSASLAPDEPPQCPVCKDGISHTKMVPLYGRGQTLSRCDRDSDAKPTLEDISIPPR 119
Query: 108 PTCSGAKSLFAASS---QSSGQQLPYRNPYQNQDFNQEEEHDDETSQQMVTNLGGATMAT 164
P SG +SL A ++ S QQLPYRNPYQ Q N D++T Q + NL G M
Sbjct: 120 PPASGIQSLLAMATSPQNGSRQQLPYRNPYQTQHINSSTYQDNDTPQ--MHNL-GTFMTP 176
Query: 165 GFPHLVFGMFGVGXXXXXXXXXXXXXRFRRLEMQADKSLNRIS 207
FP VFG FG R+RR EM A+KSLNRIS
Sbjct: 177 LFPQFVFG-FG-NSENSHHMVGNSSSRWRRQEMLANKSLNRIS 217
>Medtr2g013550.2 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664172-3662157 | 20130731
Length = 236
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 137/243 (56%), Gaps = 29/243 (11%)
Query: 1 MAFEHYLTQEWEG-----SETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWL 55
MAFE + E + SE E GFDCNICL+FA+EPVVTLCGHLYCWPCIYKWL
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEE---SNGFDCNICLDFANEPVVTLCGHLYCWPCIYKWL 57
Query: 56 YVQS-ASLAPDEPPQCPVCKDGISHTTMVPLYGRG----PSDSNLKVQHKDVLIPPRPTC 110
+VQS SL DE PQCPVCK+ ISHTTMVPLYGRG PS + D +PPRPT
Sbjct: 58 HVQSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCC--DDNFVPPRPTA 115
Query: 111 SGAKSLFAASSQSS-GQQLPYRNPYQNQDFNQEEEHD---DETSQQMVTNLGGATMATGF 166
SGA++L A +SQS Q+LPYRNPYQ Q N H D TSQ + NLG + +
Sbjct: 116 SGAQALLATASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQML--NLGASMTSRSR 173
Query: 167 PHLVFGMFG-------VGX-XXXXXXXXXXXXRFRRLEMQADKSLNRISIXXXXXXXXXX 218
H V MF VG R RR E+Q DK LNRIS
Sbjct: 174 HHTVVRMFEEMIFSGVVGHPPNSYQMVGNNSSRLRRQELQTDKFLNRISNFLFCCFLLCL 233
Query: 219 IVF 221
IVF
Sbjct: 234 IVF 236
>Medtr2g013550.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664296-3662157 | 20130731
Length = 236
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 137/243 (56%), Gaps = 29/243 (11%)
Query: 1 MAFEHYLTQEWEG-----SETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWL 55
MAFE + E + SE E GFDCNICL+FA+EPVVTLCGHLYCWPCIYKWL
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEE---SNGFDCNICLDFANEPVVTLCGHLYCWPCIYKWL 57
Query: 56 YVQS-ASLAPDEPPQCPVCKDGISHTTMVPLYGRG----PSDSNLKVQHKDVLIPPRPTC 110
+VQS SL DE PQCPVCK+ ISHTTMVPLYGRG PS + D +PPRPT
Sbjct: 58 HVQSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCC--DDNFVPPRPTA 115
Query: 111 SGAKSLFAASSQSS-GQQLPYRNPYQNQDFNQEEEHD---DETSQQMVTNLGGATMATGF 166
SGA++L A +SQS Q+LPYRNPYQ Q N H D TSQ + NLG + +
Sbjct: 116 SGAQALLATASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQML--NLGASMTSRSR 173
Query: 167 PHLVFGMFG-------VGX-XXXXXXXXXXXXRFRRLEMQADKSLNRISIXXXXXXXXXX 218
H V MF VG R RR E+Q DK LNRIS
Sbjct: 174 HHTVVRMFEEMIFSGVVGHPPNSYQMVGNNSSRLRRQELQTDKFLNRISNFLFCCFLLCL 233
Query: 219 IVF 221
IVF
Sbjct: 234 IVF 236
>Medtr2g013550.3 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:3664165-3662157 | 20130731
Length = 236
Score = 191 bits (486), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 137/243 (56%), Gaps = 29/243 (11%)
Query: 1 MAFEHYLTQEWEG-----SETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWL 55
MAFE + E + SE E GFDCNICL+FA+EPVVTLCGHLYCWPCIYKWL
Sbjct: 1 MAFEDCFSHELKTIPNSMSEAEE---SNGFDCNICLDFANEPVVTLCGHLYCWPCIYKWL 57
Query: 56 YVQS-ASLAPDEPPQCPVCKDGISHTTMVPLYGRG----PSDSNLKVQHKDVLIPPRPTC 110
+VQS SL DE PQCPVCK+ ISHTTMVPLYGRG PS + D +PPRPT
Sbjct: 58 HVQSDDSLGSDEHPQCPVCKENISHTTMVPLYGRGGHTPPSGKSSCC--DDNFVPPRPTA 115
Query: 111 SGAKSLFAASSQSS-GQQLPYRNPYQNQDFNQEEEHD---DETSQQMVTNLGGATMATGF 166
SGA++L A +SQS Q+LPYRNPYQ Q N H D TSQ + NLG + +
Sbjct: 116 SGAQALLATASQSDQHQRLPYRNPYQGQYLNSSSYHQQEGDATSQML--NLGASMTSRSR 173
Query: 167 PHLVFGMFG-------VGX-XXXXXXXXXXXXRFRRLEMQADKSLNRISIXXXXXXXXXX 218
H V MF VG R RR E+Q DK LNRIS
Sbjct: 174 HHTVVRMFEEMIFSGVVGHPPNSYQMVGNNSSRLRRQELQTDKFLNRISNFLFCCFLLCL 233
Query: 219 IVF 221
IVF
Sbjct: 234 IVF 236
>Medtr4g088870.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr4:35466967-35468099 | 20130731
Length = 199
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 119/220 (54%), Gaps = 46/220 (20%)
Query: 1 MAFEH--YLTQEWEG-----SETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYK 53
M FEH + QEW+ +ETE + D FDC+ICL+FAHEPVVTLCGHL+CW CIYK
Sbjct: 1 MDFEHEEFFNQEWKADGNSVTETEKENIDNCFDCHICLDFAHEPVVTLCGHLFCWSCIYK 60
Query: 54 WLYVQSASLAPDEPPQCPVCKDGISHTTMVPLYGRGPSDS-----NLKVQHKDVLIPPRP 108
WL+VQ ASLAPDE PQCPVCK ISHT MVPLYGRG + S N K +D+ IPPRP
Sbjct: 61 WLFVQRASLAPDEHPQCPVCKHDISHTKMVPLYGRGQTLSSRRGRNRKATLEDISIPPRP 120
Query: 109 TCSGAKSLFAASSQSSGQQLPYRNPYQNQDFNQEEEHDDETSQQMVTNLGGATMATGFPH 168
S +SL + Q QE+E+DD + Q + L + P
Sbjct: 121 PASEIQSLLETRTSPQSDQ-------------QEQENDDTSQVQNLDTLVTPVI----PR 163
Query: 169 LVFGMFGVGXXXXXXXXXXXXXRFRRLEMQADKSLNRISI 208
+FG + M A+KSLN+IS
Sbjct: 164 YMFGNYEDLHL-----------------MVANKSLNKISF 186
>Medtr8g465910.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr8:23517772-23514789 | 20130731
Length = 244
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/217 (38%), Positives = 108/217 (49%), Gaps = 26/217 (11%)
Query: 9 QEWEGSETETVSCD----GGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAP 64
+ W+ S D GFDCNICL+ +PVVT CGHLYCWPCIYKWL +QS +
Sbjct: 24 KNWKTSTDVIADSDRNASSGFDCNICLDCVQDPVVTFCGHLYCWPCIYKWLDIQSGISSE 83
Query: 65 DE--PPQCPVCKDGISHTTMVPLYGRGPSD--SNLKVQHKDVLIPPRPTCSGAKSLFAAS 120
+E PQCPVCK +S +++VPLYGRG + S K Q +++P RPT G +S
Sbjct: 84 NEKQKPQCPVCKSELSQSSLVPLYGRGQTMTLSEGKAQQVGIVVPRRPT--GPRSF---- 137
Query: 121 SQSSGQQLPYRNPYQNQDFNQEEEHDDETSQQMVTNLGGATMATG--FPHLVFG-MFG-- 175
+ ++ Q Y+N + FN M + G A T F +++G MFG
Sbjct: 138 NPTTVSQPTYQNYQHPRQFNSIPS---SYPSPMFSTSGSALDNTYGIFGEMIYGRMFGNQ 194
Query: 176 ----VGXXXXXXXXXXXXXRFRRLEMQADKSLNRISI 208
R RR MQ DKSLNRIS
Sbjct: 195 IENMYTYPNSYSFQGTNNPRMRRHLMQVDKSLNRISF 231
>Medtr2g090295.1 | E3 ubiquitin-protein ligase RMA1H1-like protein |
HC | chr2:38396296-38393419 | 20130731
Length = 247
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 2 AFEHYLTQE-WEGSETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSA 60
+ E +QE W+ + E +S GFDCNICLE +PVVTLCGHLYCWPCIYKWL +
Sbjct: 16 SLEEKSSQEMWKCASAEAISGSSGFDCNICLECVQDPVVTLCGHLYCWPCIYKWLNFHAE 75
Query: 61 SLAP-DEPPQCPVCKDGISHTTMVPLYGRGPSDSNLKVQHKDV--LIPPRPTCSGAKSLF 117
+ E PQCPVCK IS +++VPLYGRG + K + +IPPRP +
Sbjct: 76 NQEKQKEEPQCPVCKSEISKSSLVPLYGRGQTTPPSKGNDHQIGSVIPPRPLGPSWMTNL 135
Query: 118 AASSQSSGQQLPYRNPYQNQDFNQEEEHDDETSQQMVTNLGGATMATGFPHLVFG----- 172
S ++ Y N H + M+ G + VFG
Sbjct: 136 PRSLDAANVSQHNSRTYHPHYLN----HSQRYASPMLNTGGSLPNPLDTSYGVFGEMIYA 191
Query: 173 -MFG------VGXXXXXXXXXXXXXRFRRLEMQADKSLNRI 206
+FG R RR M+ADKSL RI
Sbjct: 192 RIFGNQVTNIYTYPNSYNLTGISNPRIRRHLMRADKSLGRI 232
>Medtr2g090325.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr2:38420153-38419551 | 20130731
Length = 200
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
Query: 13 GSETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPV 72
+E +C GFDCNICLE +PVVTLCGHLYCWPCIYKWL + +E QCPV
Sbjct: 6 SAEGSNRNCSSGFDCNICLENVQDPVVTLCGHLYCWPCIYKWLNTR------NEKSQCPV 59
Query: 73 CKDGISHTTMVPLYGRGPSDSNLKVQHKDVLIPPRP 108
CK IS +T+VPLYGRG + S K +++PPRP
Sbjct: 60 CKLEISESTLVPLYGRGKTTST----SKGIVVPPRP 91
>Medtr2g090330.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 166
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Query: 21 CDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHT 80
C F+CNICLE +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK IS +
Sbjct: 29 CSNDFECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISES 86
Query: 81 TMVPLYGRGPSDSNLKVQ-HKD-VLIPPRPTCSGAKSLFAAS 120
T+VPLYGRG + S+ + + H+D V++PPRP G +SL A+
Sbjct: 87 TLVPLYGRGKTTSSSEGEAHQDGVVVPPRPL--GPRSLDTAT 126
>Medtr2g090330.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38425346-38424779 | 20130731
Length = 163
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Query: 21 CDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHT 80
C F+CNICLE +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK IS +
Sbjct: 26 CSNDFECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISES 83
Query: 81 TMVPLYGRGPSDSNLKVQ-HKD-VLIPPRPTCSGAKSLFAAS 120
T+VPLYGRG + S+ + + H+D V++PPRP G +SL A+
Sbjct: 84 TLVPLYGRGKTTSSSEGEAHQDGVVVPPRPL--GPRSLDTAT 123
>Medtr2g090330.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:38426674-38424779 | 20130731
Length = 163
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 73/102 (71%), Gaps = 6/102 (5%)
Query: 21 CDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHT 80
C F+CNICLE +PVVTLCGHLYCWPCIYKW + S S +E P+CP+CK IS +
Sbjct: 26 CSNDFECNICLEHVKDPVVTLCGHLYCWPCIYKW--INSTSWEHNEKPECPICKSEISES 83
Query: 81 TMVPLYGRGPSDSNLKVQ-HKD-VLIPPRPTCSGAKSLFAAS 120
T+VPLYGRG + S+ + + H+D V++PPRP G +SL A+
Sbjct: 84 TLVPLYGRGKTTSSSEGEAHQDGVVVPPRPL--GPRSLDTAT 123
>Medtr7g093390.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37122307 | 20130731
Length = 453
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A EPV+T CGHL+CW C+Y+WL++ S + +CPVCK ++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 85 LYGRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+YGRG S L+ + + IPPRP +SL
Sbjct: 224 IYGRGNSTRVLE-EDSTLKIPPRPQAKRVESL 254
>Medtr7g093390.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118841-37121989 | 20130731
Length = 453
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A EPV+T CGHL+CW C+Y+WL++ S + +CPVCK ++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 85 LYGRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+YGRG S L+ + + IPPRP +SL
Sbjct: 224 IYGRGNSTRVLE-EDSTLKIPPRPQAKRVESL 254
>Medtr7g093390.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37121936 | 20130731
Length = 453
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A EPV+T CGHL+CW C+Y+WL++ S + +CPVCK ++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 85 LYGRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+YGRG S L+ + + IPPRP +SL
Sbjct: 224 IYGRGNSTRVLE-EDSTLKIPPRPQAKRVESL 254
>Medtr7g093390.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:37118817-37122307 | 20130731
Length = 453
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A EPV+T CGHL+CW C+Y+WL++ S + +CPVCK ++ ++ P
Sbjct: 170 FDCNICLDLAKEPVLTCCGHLFCWQCLYRWLHLHSDAR------ECPVCKGEVTIKSVTP 223
Query: 85 LYGRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+YGRG S L+ + + IPPRP +SL
Sbjct: 224 IYGRGNSTRVLE-EDSTLKIPPRPQAKRVESL 254
>Medtr1g054280.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23323943-23324740 | 20130731
Length = 265
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 68/103 (66%), Gaps = 15/103 (14%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A PVVT CGHL+CWPC+Y+WL+++S+ + CPVCK ++ ++P
Sbjct: 76 FDCNICLDLAKNPVVTCCGHLFCWPCLYRWLHLRSS-----QTKACPVCKGEVTDKNVIP 130
Query: 85 LYGRGPSDSNLKVQHKD----VLIPPRPTCSGAKSLFAASSQS 123
+YG ++N++V+H+D + IP RP A+ + SSQ+
Sbjct: 131 IYG---GENNVEVRHEDSSSTLQIPSRPK---ARHVSNDSSQT 167
>Medtr1g021895.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660200-6658417 | 20130731
Length = 232
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 23 GGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTM 82
G F+CNIC + A +P++TLCGHL+CWPC+YKWL+ S S +CPVCK I +
Sbjct: 28 GNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSR------ECPVCKAMIEEEKL 81
Query: 83 VPLYGRGPSDSNLKVQH-KDVLIPPRPT 109
VPLYGRG + ++ + + V IP RP
Sbjct: 82 VPLYGRGKTSTDPRSKSVPGVNIPHRPA 109
>Medtr1g021895.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr1:6660432-6658324 | 20130731
Length = 232
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 7/88 (7%)
Query: 23 GGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTM 82
G F+CNIC + A +P++TLCGHL+CWPC+YKWL+ S S +CPVCK I +
Sbjct: 28 GNFECNICFDLAQDPIITLCGHLFCWPCLYKWLHFHSQSR------ECPVCKAMIEEEKL 81
Query: 83 VPLYGRGPSDSNLKVQH-KDVLIPPRPT 109
VPLYGRG + ++ + + V IP RP
Sbjct: 82 VPLYGRGKTSTDPRSKSVPGVNIPHRPA 109
>Medtr5g019300.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr5:7292943-7291465 | 20130731
Length = 239
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 7/88 (7%)
Query: 23 GGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTM 82
G F+CNIC + A +PV+TLCGHL+CWPC+Y+WL+ S S +CPVCK + +
Sbjct: 33 GDFECNICFDLAQDPVITLCGHLFCWPCLYRWLHHHSHS------QECPVCKALVQEEKL 86
Query: 83 VPLYGRGPSDSNLKVQ-HKDVLIPPRPT 109
VPLYGRG + ++ + + + + IP RP+
Sbjct: 87 VPLYGRGKTQTDPRTKSYPGMEIPRRPS 114
>Medtr4g029440.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 431
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A +PV+T CGHL+CWPC Y+ Y S + +CPVCK ++ + ++P
Sbjct: 132 FDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKA------KECPVCKGEVTESGIIP 185
Query: 85 LY--GRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+Y G G D ++++ + +PPRP +S+
Sbjct: 186 IYGHGNGGGDCQMEMKEAGLRVPPRPKAPRVESI 219
>Medtr4g029440.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:10176191-10172035 | 20130731
Length = 425
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 8/94 (8%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A +PV+T CGHL+CWPC Y+ Y S + +CPVCK ++ + ++P
Sbjct: 126 FDCNICLDIARDPVLTCCGHLFCWPCFYQLSYAYSKA------KECPVCKGEVTESGIIP 179
Query: 85 LY--GRGPSDSNLKVQHKDVLIPPRPTCSGAKSL 116
+Y G G D ++++ + +PPRP +S+
Sbjct: 180 IYGHGNGGGDCQMEMKEAGLRVPPRPKAPRVESI 213
>Medtr1g054465.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23552590-23553177 | 20130731
Length = 195
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 18/139 (12%)
Query: 1 MAFEHYLTQEWEGSETETVSCDGGF-DCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQS 59
M +++ E + + D GF DCNIC + A EPV+T CGHL+CWPC+Y+WL +S
Sbjct: 30 MDIYRKTSEKKENVDEKDCGNDRGFYDCNICFDLAKEPVLTCCGHLFCWPCLYRWLNTKS 89
Query: 60 ------ASLAPDEPPQCPVCKDGISHTTMVPLYGRGPSDSNLKVQHKD---VLIPPRPTC 110
+SLA +CPVCK ++ T+ P+YG G ++ + + IPPRP
Sbjct: 90 PLSFRRSSLA----KECPVCKGEVTDKTVTPIYGGGNEVEVVRAEDSSSTTLQIPPRPN- 144
Query: 111 SGAKSLFAASSQSSGQQLP 129
S+F S Q LP
Sbjct: 145 ---ASVFRVSRVLRIQVLP 160
>Medtr1g054210.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23234618-23235307 | 20130731
Length = 229
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 13/133 (9%)
Query: 1 MAFEHYLTQEWEGSETETVSCDGGF-DCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQS 59
+A + T E + + GGF DCNICL A +PVVT CGHL+CWPC+Y+WL+ S
Sbjct: 97 VALDKSKTSEKKENVDNGCGSKGGFYDCNICLGLAKDPVVTRCGHLFCWPCLYRWLH--S 154
Query: 60 ASLAPDEPPQCPVCKDGISHTTMVPLYGRGPSDSNLKVQHKD----VLIPPRPTCSGAKS 115
S E CPVCK + ++P+YG G ++++V H+D + IP RP S
Sbjct: 155 GSYGNKE---CPVCKGEVKDKKVIPIYGGG---NDVEVGHEDSSSTLQIPRRPNARRKDS 208
Query: 116 LFAASSQSSGQQL 128
S + + L
Sbjct: 209 NARQSREGRVRHL 221
>Medtr1g054260.1 | zinc finger, C3HC4 type (RING finger) protein |
LC | chr1:23305014-23305622 | 20130731
Length = 202
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 17/119 (14%)
Query: 23 GGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQS------ASLAPDEPPQCPVCKDG 76
G +DCNIC A +PV+T CGHL+CWPC+Y+WL +S +SLA +CPVCK
Sbjct: 85 GFYDCNICFVLAKDPVLTCCGHLFCWPCLYRWLNTKSPLSFTRSSLA----KECPVCKGE 140
Query: 77 ISHTTMVPLYGRGPSDSNLKVQHKD---VLIPPRPTC----SGAKSLFAASSQSSGQQL 128
++ T+ P+YG G ++ + + IPPRP K LFA S S ++
Sbjct: 141 VTDKTVTPIYGGGNDVEVVRAEDSSSTTLQIPPRPNARRVSKAPKGLFANFSVSFSSRV 199
>Medtr2g061230.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr2:25954060-25951976 | 20130731
Length = 237
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Query: 25 FDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVCKDGISHTTMVP 84
FDCNICL+ A+ PV+T CGHL+CW C Y+ Y S + +CPVC+ + T ++P
Sbjct: 107 FDCNICLDTANNPVLTCCGHLFCWECFYQLAYAYSNA------KECPVCEGEVLDTDIIP 160
Query: 85 LYGRGPSD--SNLKVQHKDVLIPPRP 108
+YG G D S L+++ + +P RP
Sbjct: 161 VYGNGMIDDISRLELKETCLRVPDRP 186
>Medtr1g015390.1 | peroxisome biogenesis factor 10 | HC |
chr1:3820269-3810303 | 20130731
Length = 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 9/73 (12%)
Query: 14 SETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQCPVC 73
S +E + +G C +CL P T CGH++CW CI +W +E P+CP+C
Sbjct: 353 SSSEHNATNGVSKCTLCLSNRQHPTATSCGHVFCWNCITEWC---------NEKPECPLC 403
Query: 74 KDGISHTTMVPLY 86
+ I+H+++V +Y
Sbjct: 404 RTPITHSSLVCVY 416
>Medtr7g084020.1 | RING finger protein | HC | chr7:32376240-32370124
| 20130731
Length = 744
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 10 EWEGSETETVSCDGGFDCNICLEFAHEPVVTLCGHLYCWPCIYKWLYVQSASLAPDEPPQ 69
+WE T S C ICLE P +T CGH++C+PCI ++L + D +
Sbjct: 205 QWEDIICVTYSTPFPVQCPICLEHPLCPQITSCGHIFCFPCILQYLMLGEEDHKGDRWKR 264
Query: 70 CPVCKDGISHTTMVPLY 86
CP+C IS + L+
Sbjct: 265 CPLCFVTISVKDLYTLH 281