Miyakogusa Predicted Gene
- Lj4g3v0451030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0451030.1 Non Characterized Hit- tr|I1KLI6|I1KLI6_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,94.35,0,ZF_RING_2,Zinc finger, RING-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FYVE/P,CUFF.47252.1
(248 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g088950.1 | RING zinc finger protein | HC | chr4:35544084-... 429 e-120
Medtr2g013080.1 | RING zinc finger protein | HC | chr2:3460192-3... 400 e-112
Medtr4g088950.2 | RING zinc finger protein | HC | chr4:35544055-... 300 8e-82
Medtr4g015600.1 | zinc finger, C3HC4 type (RING finger) protein ... 299 2e-81
Medtr7g068290.1 | zinc finger, C3HC4 type (RING finger) protein ... 298 5e-81
Medtr3g463720.1 | RING/U-box protein | HC | chr3:25539281-255423... 283 7e-77
Medtr2g013080.2 | RING zinc finger protein | HC | chr2:3460192-3... 281 4e-76
Medtr3g463720.2 | RING/U-box protein | HC | chr3:25539157-255424... 256 1e-68
Medtr4g015600.3 | zinc finger, C3HC4 type (RING finger) protein ... 223 2e-58
Medtr8g079910.1 | RING finger protein | HC | chr8:34299074-34296... 209 2e-54
Medtr4g015600.2 | zinc finger, C3HC4 type (RING finger) protein ... 206 1e-53
Medtr3g086130.1 | ubiquitin-protein ligase | HC | chr3:38974537-... 196 3e-50
Medtr4g015600.5 | zinc finger, C3HC4 type (RING finger) protein ... 155 4e-38
Medtr4g015600.4 | zinc finger, C3HC4 type (RING finger) protein ... 155 4e-38
Medtr8g079910.2 | RING finger protein | HC | chr8:34299074-34296... 143 2e-34
Medtr4g015600.6 | zinc finger, C3HC4 type (RING finger) protein ... 129 2e-30
>Medtr4g088950.1 | RING zinc finger protein | HC |
chr4:35544084-35540259 | 20130731
Length = 248
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 204/248 (82%), Positives = 216/248 (87%)
Query: 1 MYVAASMRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQW 60
MYVA+SMRKSFKDSLKLL+ADI HANTLASDFPREYDGACLQMRMSYSPAA LFLF VQW
Sbjct: 1 MYVASSMRKSFKDSLKLLQADIQHANTLASDFPREYDGACLQMRMSYSPAATLFLFFVQW 60
Query: 61 TDCHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDR 120
TDCH YKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL+KGVTD+ED+
Sbjct: 61 TDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDK 120
Query: 121 KQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWR 180
KQKAVCM QSSD+DIER+DECGICME NSKIVLPNCNH MCLKCYREWR
Sbjct: 121 KQKAVCMERYRRRDDDDCRQSSDIDIERDDECGICMEMNSKIVLPNCNHVMCLKCYREWR 180
Query: 181 TISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLF 240
T SQSCPFCRD+LKRVNSGDLWV+TDRRD VDMATVTRENLRRLFMYIDKLP+IVP+S+F
Sbjct: 181 TRSQSCPFCRDSLKRVNSGDLWVYTDRRDVVDMATVTRENLRRLFMYIDKLPLIVPDSIF 240
Query: 241 DTYDSHIR 248
D YDSHIR
Sbjct: 241 DAYDSHIR 248
>Medtr2g013080.1 | RING zinc finger protein | HC |
chr2:3460192-3454987 | 20130731
Length = 251
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/238 (79%), Positives = 201/238 (84%)
Query: 11 FKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXXX 70
FK+SLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDC+
Sbjct: 14 FKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALG 73
Query: 71 XXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXXX 130
YKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL+KGVTD ED+KQK VCM
Sbjct: 74 LLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDAEDKKQKVVCMERY 133
Query: 131 XXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFCR 190
Q SD+D ERE+ECGICME NSKIVLPNCNH MCLKCY EWR SQSCPFCR
Sbjct: 134 RRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMCLKCYHEWRARSQSCPFCR 193
Query: 191 DNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLFDTYDSHIR 248
D+LKRVNSGDLW+FTD RD VDM TVTRENLRRLFMYIDKLP+I+PESLFD YDSH+R
Sbjct: 194 DSLKRVNSGDLWIFTDSRDIVDMETVTRENLRRLFMYIDKLPLIIPESLFDPYDSHLR 251
>Medtr4g088950.2 | RING zinc finger protein | HC |
chr4:35544055-35540259 | 20130731
Length = 193
Score = 300 bits (768), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 143/182 (78%), Positives = 152/182 (83%)
Query: 1 MYVAASMRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQW 60
MYVA+SMRKSFKDSLKLL+ADI HANTLASDFPREYDGACLQMRMSYSPAA LFLF VQW
Sbjct: 1 MYVASSMRKSFKDSLKLLQADIQHANTLASDFPREYDGACLQMRMSYSPAATLFLFFVQW 60
Query: 61 TDCHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDR 120
TDCH YKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL+KGVTD+ED+
Sbjct: 61 TDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDSEDK 120
Query: 121 KQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWR 180
KQKAVCM QSSD+DIER+DECGICME NSKIVLPNCNH MCLKCYREW
Sbjct: 121 KQKAVCMERYRRRDDDDCRQSSDIDIERDDECGICMEMNSKIVLPNCNHVMCLKCYREWY 180
Query: 181 TI 182
++
Sbjct: 181 SL 182
>Medtr4g015600.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 249
Score = 299 bits (765), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 171/236 (72%)
Query: 3 VAASMRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD 62
V MRKSFKDSLK LEADI ANTLASD+P E DGA QMR+SYSPAA LF+ +WTD
Sbjct: 2 VMGEMRKSFKDSLKALEADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFMFKWTD 61
Query: 63 CHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQ 122
CH YK + DG TTMS +ERKAS++EFY VI+PSLLQLQ+G+TD E+RKQ
Sbjct: 62 CHLAGALGLLRVLVYKTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQ 121
Query: 123 KAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTI 182
K +C + S++D+ERE+EC ICME N+K+VLPNC H++C++CY +W T
Sbjct: 122 KDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDWHTR 181
Query: 183 SQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPES 238
SQSCPFCRD+LKRVNS DLW++ + D+ ++ +ENL+RLFM IDKLP+I P S
Sbjct: 182 SQSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKLPLISPIS 237
>Medtr7g068290.1 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr7:24968493-24965480 | 20130731
Length = 245
Score = 298 bits (762), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 140/230 (60%), Positives = 172/230 (74%), Gaps = 1/230 (0%)
Query: 7 MRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXX 66
MRKSFKDSLK LEADI ANTLASD P + DGA LQMR+SYSPAAH FLFLVQWTDCH
Sbjct: 1 MRKSFKDSLKALEADIQFANTLASDCPSDQDGAYLQMRLSYSPAAHFFLFLVQWTDCHLA 60
Query: 67 XXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVC 126
YK Y DG TTMS HERKAS++EFY V++PSLLQL +G+TD EDRKQK +C
Sbjct: 61 GALGLLKIFIYKAYKDGKTTMSIHERKASLKEFYGVVFPSLLQLHRGITDVEDRKQKLLC 120
Query: 127 MXXXXXXXXXXXWQSSDLDI-EREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQS 185
+SS++D+ + E+EC ICME S +VLPNCNH+MC+KCYR+W S+S
Sbjct: 121 ATKYKPKELVDKGKSSEIDVEKEEEECDICMEITSIVVLPNCNHSMCIKCYRDWHARSES 180
Query: 186 CPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIV 235
CPFCRD+LKRVNSGDLW++ + D+A++ +ENL+RLFMYI+KLP++
Sbjct: 181 CPFCRDSLKRVNSGDLWMYMSSSEIDDLASINKENLKRLFMYIEKLPLVA 230
>Medtr3g463720.1 | RING/U-box protein | HC | chr3:25539281-25542339
| 20130731
Length = 243
Score = 283 bits (725), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 136/243 (55%), Positives = 170/243 (69%), Gaps = 1/243 (0%)
Query: 7 MRKS-FKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHX 65
M KS F++SLK LEADI +ANTLA PR+ +G C QMR+SYSP A LFL LVQWTD
Sbjct: 1 MGKSLFQESLKALEADIQYANTLALGHPRDKEGGCFQMRLSYSPVAPLFLSLVQWTDYRL 60
Query: 66 XXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAV 125
Y Y +G TT+S +ERKASIR+FY++I+P+LLQLQKGVTD E+RKQK V
Sbjct: 61 AGALGLLRILIYVTYGNGKTTISIYERKASIRQFYSIIFPALLQLQKGVTDLEERKQKEV 120
Query: 126 CMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQS 185
+ S +DIERE ECG+C+E +K+VLPNC H MC KCYREW SQS
Sbjct: 121 YANRYQKKTDFKDRRESKIDIEREKECGVCLEVKAKVVLPNCCHQMCFKCYREWCLRSQS 180
Query: 186 CPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPESLFDTYDS 245
CPFCRD+LKRVNSGDLW++TD D VD+ T+ +EN + LF+YI+KLP+I+P+ +YD
Sbjct: 181 CPFCRDSLKRVNSGDLWIYTDTSDIVDVGTIFKENCKILFLYIEKLPLIIPDPRHVSYDP 240
Query: 246 HIR 248
R
Sbjct: 241 FFR 243
>Medtr2g013080.2 | RING zinc finger protein | HC |
chr2:3460192-3457961 | 20130731
Length = 246
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 134/175 (76%), Positives = 142/175 (81%)
Query: 11 FKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXXX 70
FK+SLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDC+
Sbjct: 14 FKESLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCNLAGALG 73
Query: 71 XXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXXX 130
YKVYVDGTTTMSTHERKASIREFYAVIYPSLLQL+KGVTD ED+KQK VCM
Sbjct: 74 LLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLEKGVTDAEDKKQKVVCMERY 133
Query: 131 XXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQS 185
Q SD+D ERE+ECGICME NSKIVLPNCNH MCLKCY EW ++S S
Sbjct: 134 RRREDEEHKQFSDIDFEREEECGICMEMNSKIVLPNCNHVMCLKCYHEWYSLSLS 188
>Medtr3g463720.2 | RING/U-box protein | HC | chr3:25539157-25542475
| 20130731
Length = 242
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 150/216 (69%)
Query: 33 PREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXXXXXXXXXXXYKVYVDGTTTMSTHER 92
PR+ +G C QMR+SYSP A LFL LVQWTD Y Y +G TT+S +ER
Sbjct: 27 PRDKEGGCFQMRLSYSPVAPLFLSLVQWTDYRLAGALGLLRILIYVTYGNGKTTISIYER 86
Query: 93 KASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXXXXXXXXXXXWQSSDLDIEREDEC 152
KASIR+FY++I+P+LLQLQKGVTD E+RKQK V + S +DIERE EC
Sbjct: 87 KASIRQFYSIIFPALLQLQKGVTDLEERKQKEVYANRYQKKTDFKDRRESKIDIEREKEC 146
Query: 153 GICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVD 212
G+C+E +K+VLPNC H MC KCYREW SQSCPFCRD+LKRVNSGDLW++TD D VD
Sbjct: 147 GVCLEVKAKVVLPNCCHQMCFKCYREWCLRSQSCPFCRDSLKRVNSGDLWIYTDTSDIVD 206
Query: 213 MATVTRENLRRLFMYIDKLPVIVPESLFDTYDSHIR 248
+ T+ +EN + LF+YI+KLP+I+P+ +YD R
Sbjct: 207 VGTIFKENCKILFLYIEKLPLIIPDPRHVSYDPFFR 242
>Medtr4g015600.3 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682819 | 20130731
Length = 178
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/177 (57%), Positives = 126/177 (71%)
Query: 3 VAASMRKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTD 62
V MRKSFKDSLK LEADI ANTLASD+P E DGA QMR+SYSPAA LF+ +WTD
Sbjct: 2 VMGEMRKSFKDSLKALEADIQFANTLASDYPSETDGARFQMRLSYSPAAQFLLFMFKWTD 61
Query: 63 CHXXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQ 122
CH YK + DG TTMS +ERKAS++EFY VI+PSLLQLQ+G+TD E+RKQ
Sbjct: 62 CHLAGALGLLRVLVYKTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQ 121
Query: 123 KAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREW 179
K +C + S++D+ERE+EC ICME N+K+VLPNC H++C++CY +W
Sbjct: 122 KDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDW 178
>Medtr8g079910.1 | RING finger protein | HC | chr8:34299074-34296406
| 20130731
Length = 254
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 154/249 (61%), Gaps = 19/249 (7%)
Query: 8 RKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCH--- 64
R + DSLKLLEADIHHAN LA+ PR G+ QM++ YS A LFL L+QW DC
Sbjct: 7 RLPYHDSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSCSC 66
Query: 65 -XXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQK 123
YKV+ DG ++++H RKA+I++FYAVI PSL +L + E
Sbjct: 67 FLHRYLNFFHIIIYKVHNDGRPSITSHGRKATIQDFYAVILPSLQRLHGSLEKLE----- 121
Query: 124 AVCMXXXXXXXXXXXWQ---------SSDLDIEREDECGICMETNSKIVLPNCNHAMCLK 174
+CM + ++++D+EREDECGIC+E +K+VLPNC HAMC+K
Sbjct: 122 -ICMKGHTSLDGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIK 180
Query: 175 CYREWRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVI 234
CYR+W T S+SCPFCR +++RVNS DLWV T D VD TV++E+L R ++YI+ LP
Sbjct: 181 CYRKWNTKSESCPFCRGSIRRVNSEDLWVLTCDDDVVDAETVSKEDLLRFYLYINSLPKD 240
Query: 235 VPESLFDTY 243
P++LF Y
Sbjct: 241 YPDALFLMY 249
>Medtr4g015600.2 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 196
Score = 206 bits (524), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 122/161 (75%)
Query: 78 KVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXXXXXXXXXX 137
+ + DG TTMS +ERKAS++EFY VI+PSLLQLQ+G+TD E+RKQK +C
Sbjct: 24 QTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKDVIG 83
Query: 138 XWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREWRTISQSCPFCRDNLKRVN 197
+ S++D+ERE+EC ICME N+K+VLPNC H++C++CY +W T SQSCPFCRD+LKRVN
Sbjct: 84 KGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDWHTRSQSCPFCRDSLKRVN 143
Query: 198 SGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPES 238
S DLW++ + D+ ++ +ENL+RLFM IDKLP+I P S
Sbjct: 144 SSDLWIYMSNSEIQDLESINKENLKRLFMRIDKLPLISPIS 184
>Medtr3g086130.1 | ubiquitin-protein ligase | HC |
chr3:38974537-38976872 | 20130731
Length = 259
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 151/249 (60%), Gaps = 9/249 (3%)
Query: 8 RKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCHXXX 67
R ++DSL++LEADI AN+LA+ PR G ++M++ + A L L +QW DC
Sbjct: 10 RLPYQDSLQILEADIQQANSLAAAIPRARGGTLIKMKLVCNQLAPLLLLFLQWMDCSCAA 69
Query: 68 XXXXXXXX----XYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDT-EDRKQ 122
YK DG + MST RKA+I++FYAVI PSL +L DT E ++
Sbjct: 70 FLHSYLNLFHILIYKEPNDGRSNMSTRGRKATIKDFYAVILPSLQRLHGSFDDTMETCEE 129
Query: 123 KAVCMXXXXXXXXXXXWQS----SDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYRE 178
+ ++ +++D++REDECGIC+E +K+VLPNC HAMC+KCYR+
Sbjct: 130 GNTSLEGSSCGNKVIEFEGDGKLTNVDLQREDECGICLEPCTKMVLPNCCHAMCIKCYRK 189
Query: 179 WRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKLPVIVPES 238
W S+SCPFCR +L+RVNS DLWV T D VD TV++E+L R ++YI+KLP P++
Sbjct: 190 WNRKSESCPFCRGSLRRVNSEDLWVLTCDEDVVDAETVSKEDLLRFYLYINKLPKDNPDA 249
Query: 239 LFDTYDSHI 247
LF Y ++
Sbjct: 250 LFLMYYEYL 258
>Medtr4g015600.5 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 140
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 93/127 (73%)
Query: 112 KGVTDTEDRKQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAM 171
+G+TD E+RKQK +C + S++D+ERE+EC ICME N+K+VLPNC H++
Sbjct: 2 RGITDVEERKQKDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSL 61
Query: 172 CLKCYREWRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKL 231
C++CY +W T SQSCPFCRD+LKRVNS DLW++ + D+ ++ +ENL+RLFM IDKL
Sbjct: 62 CMRCYNDWHTRSQSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKL 121
Query: 232 PVIVPES 238
P+I P S
Sbjct: 122 PLISPIS 128
>Medtr4g015600.4 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682267 | 20130731
Length = 140
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 93/127 (73%)
Query: 112 KGVTDTEDRKQKAVCMXXXXXXXXXXXWQSSDLDIEREDECGICMETNSKIVLPNCNHAM 171
+G+TD E+RKQK +C + S++D+ERE+EC ICME N+K+VLPNC H++
Sbjct: 2 RGITDVEERKQKDLCATKYKPKDVIGKGKLSEIDLEREEECPICMEMNNKVVLPNCYHSL 61
Query: 172 CLKCYREWRTISQSCPFCRDNLKRVNSGDLWVFTDRRDAVDMATVTRENLRRLFMYIDKL 231
C++CY +W T SQSCPFCRD+LKRVNS DLW++ + D+ ++ +ENL+RLFM IDKL
Sbjct: 62 CMRCYNDWHTRSQSCPFCRDSLKRVNSSDLWIYMSNSEIQDLESINKENLKRLFMRIDKL 121
Query: 232 PVIVPES 238
P+I P S
Sbjct: 122 PLISPIS 128
>Medtr8g079910.2 | RING finger protein | HC | chr8:34299074-34296406
| 20130731
Length = 197
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 110/188 (58%), Gaps = 19/188 (10%)
Query: 8 RKSFKDSLKLLEADIHHANTLASDFPREYDGACLQMRMSYSPAAHLFLFLVQWTDCH--- 64
R + DSLKLLEADIHHAN LA+ PR G+ QM++ YS A LFL L+QW DC
Sbjct: 7 RLPYHDSLKLLEADIHHANALAAAIPRGKGGSVFQMKLVYSQLAPLFLLLLQWMDCSCSC 66
Query: 65 -XXXXXXXXXXXXYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQK 123
YKV+ DG ++++H RKA+I++FYAVI PSL +L + E
Sbjct: 67 FLHRYLNFFHIIIYKVHNDGRPSITSHGRKATIQDFYAVILPSLQRLHGSLEKLE----- 121
Query: 124 AVCMXXXXXXXXXXXWQ---------SSDLDIEREDECGICMETNSKIVLPNCNHAMCLK 174
+CM + ++++D+EREDECGIC+E +K+VLPNC HAMC+K
Sbjct: 122 -ICMKGHTSLDGPSYGKKMIEANGKLTTNVDLEREDECGICLEPCTKMVLPNCCHAMCIK 180
Query: 175 CYREWRTI 182
CYR+W I
Sbjct: 181 CYRKWLVI 188
>Medtr4g015600.6 | zinc finger, C3HC4 type (RING finger) protein |
HC | chr4:4686907-4682819 | 20130731
Length = 125
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 77/102 (75%)
Query: 78 KVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQKGVTDTEDRKQKAVCMXXXXXXXXXX 137
+ + DG TTMS +ERKAS++EFY VI+PSLLQLQ+G+TD E+RKQK +C
Sbjct: 24 QTFEDGKTTMSVYERKASLKEFYGVIFPSLLQLQRGITDVEERKQKDLCATKYKPKDVIG 83
Query: 138 XWQSSDLDIEREDECGICMETNSKIVLPNCNHAMCLKCYREW 179
+ S++D+ERE+EC ICME N+K+VLPNC H++C++CY +W
Sbjct: 84 KGKLSEIDLEREEECPICMEMNNKVVLPNCYHSLCMRCYNDW 125