Miyakogusa Predicted Gene
- Lj4g3v0450900.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450900.1 Non Characterized Hit- tr|G7ZZ86|G7ZZ86_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,85.55,0,seg,NULL,CUFF.47250.1
(1237 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g088965.1 | mediator of RNA polymerase II transcription su... 2052 0.0
Medtr2g013160.1 | mediator of RNA polymerase II transcription su... 1403 0.0
Medtr2g013180.1 | mediator of RNA polymerase II transcription su... 523 e-148
Medtr2g013190.1 | mediator of RNA polymerase II transcription su... 456 e-128
Medtr1g072070.1 | mediator of RNA polymerase II transcription su... 290 8e-78
Medtr1g072060.1 | mediator of RNA polymerase II transcription su... 223 1e-57
Medtr2g013150.1 | mediator of RNA polymerase II transcription su... 180 7e-45
Medtr4g010370.1 | mediator of RNA polymerase II transcription su... 134 6e-31
Medtr5g040120.1 | mediator of RNA polymerase II transcription su... 104 4e-22
Medtr7g039500.1 | mediator of RNA polymerase II transcription su... 103 8e-22
Medtr3g057920.1 | hypothetical protein | LC | chr3:22926789-2292... 75 3e-13
Medtr3g057930.1 | transmembrane protein, putative | LC | chr3:22... 72 3e-12
>Medtr4g088965.1 | mediator of RNA polymerase II transcription subunit
16 | HC | chr4:35573049-35558652 | 20130731
Length = 1245
Score = 2052 bits (5316), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1011/1196 (84%), Positives = 1069/1196 (89%), Gaps = 3/1196 (0%)
Query: 44 KPPLDDPMEEDDQISSATVFTIRLRQSSSNLQHKMSVPELCRNFSAVSWCGKLNAIACAA 103
K P+D PMEED ++ ATVFTIRLRQS +NL HKMSVPELCRNFSAVSWCGKLNAIACAA
Sbjct: 51 KSPIDQPMEEDS-VNPATVFTIRLRQSKANLMHKMSVPELCRNFSAVSWCGKLNAIACAA 109
Query: 104 ETCARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSGPCALLI 163
ETCARIPSS ANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTS P ALLI
Sbjct: 110 ETCARIPSSTANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLI 169
Query: 164 ANFHGRVTIWTQPSQGPPNLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXX 223
ANFHGRVTIWTQPSQGP NLVRDASCW+REHEWRQDIAV TKWLSGVSPYRWL
Sbjct: 170 ANFHGRVTIWTQPSQGPANLVRDASCWRREHEWRQDIAVATKWLSGVSPYRWLSSKSSAT 229
Query: 224 XXXXLTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLRWSQWPPSQNGASPKWFCTSK 283
LTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQL WSQWPP+Q ++P+WF TSK
Sbjct: 230 PDSKLTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPNQKDSTPRWFHTSK 289
Query: 284 GLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQVTPKTSTTSG 343
GLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQ P TST SG
Sbjct: 290 GLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQSCPMTSTKSG 349
Query: 344 VPPLSPPNWVGFAPLAAYLFSWQEYLLSEEKQGKKLTDQNLVDAVPLYCSPVSNFSAYVS 403
VPP PPNW GFAPLAAYLF WQ++LLS KQGKKLT++N+ D+VPLYCSPVSNFSAYVS
Sbjct: 350 VPPHIPPNWDGFAPLAAYLFCWQDHLLSLAKQGKKLTEKNIGDSVPLYCSPVSNFSAYVS 409
Query: 404 PEAAAQSAATTTWGSGVTAVAFDPTCAGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRW 463
PEAAAQSAATTTWGSGVTAVAFDPT AGSVIAVVIVEGQYMSPYDPDEGP+ITGWRVQRW
Sbjct: 410 PEAAAQSAATTTWGSGVTAVAFDPTRAGSVIAVVIVEGQYMSPYDPDEGPTITGWRVQRW 469
Query: 464 ESSLQHVVLHPIFGNPTSNMGGQPPMQTVWQSKVDLSIPPTNDFKNHQLSASGMAIDVQK 523
ESSL+ VVLHPIFGNPTS+MGGQPPMQTVWQSKVDLSI PT+DF+NH+ GMA DVQK
Sbjct: 470 ESSLEQVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSILPTDDFRNHRSPTIGMATDVQK 529
Query: 524 SSEPVSDKSKRVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHVFSGPNFTPVDN 583
SE +SDKSKRVNFDPFDLPSDVRTLAR+VYSAHGGEIAIAFLRGGVH+FSGPNF VDN
Sbjct: 530 VSELISDKSKRVNFDPFDLPSDVRTLARIVYSAHGGEIAIAFLRGGVHIFSGPNFEQVDN 589
Query: 584 YQINVGSAIAAPAFSSTSCCSASVWHYTLKNCTVLKIVRVLPPSVPISQAKADSSIWERA 643
YQI VGSAIAAPAFSSTSCCSASVWH T+ N T+LKI+RVLPP VPISQAKA+SS WERA
Sbjct: 590 YQITVGSAIAAPAFSSTSCCSASVWHDTINNYTILKIIRVLPPPVPISQAKANSSTWERA 649
Query: 644 IAERFWWSLLVGVDWWDAVGCAQSAAEDGIVSLNSVIAVLDADFHSLPSVQHRQLYGPSL 703
IAERFWWSLLVGVDWWDAVGC QSAAEDGIVSLNSVIAVLDADFHSLPSVQHRQ YGPSL
Sbjct: 650 IAERFWWSLLVGVDWWDAVGCTQSAAEDGIVSLNSVIAVLDADFHSLPSVQHRQQYGPSL 709
Query: 704 DRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGRGIESALINSSALVPDLWQASGETLSG 763
DRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGRGIESALI+ + VP+LWQASGETLS
Sbjct: 710 DRIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGRGIESALIDPTQFVPELWQASGETLSN 769
Query: 764 IDPESMAVEPALIPSIQAYVDTVLDLASHFITRLRRYASFCRTLASHAVTAGSGSNRNVV 823
ID E+MAVEPAL+P +QAYVD +LDLASHFITRLRRYASFCRTLASHAVTAG+GSNRN+V
Sbjct: 770 IDSETMAVEPALVPCVQAYVDAILDLASHFITRLRRYASFCRTLASHAVTAGTGSNRNMV 829
Query: 824 XX-XXXXXXXXXXXXGQNGTTSSMGSTQLQTWVQGAIAKISSTTDGGSNSAPNPISGPST 882
GQNG+TSSMG+ QLQTWVQGAIAKIS+TT+GGSN PNPISGPS+
Sbjct: 830 ASPTQSSATPATSQGGQNGSTSSMGTVQLQTWVQGAIAKISNTTEGGSNPTPNPISGPSS 889
Query: 883 FMPISINTGTFPGTPAVRLIGDXXXXXXXXXXXXXXXXXXXTQLPRYMGVANRTADTKPQ 942
FMPISINTGTFPGTPAVRLIGD TQ+PRYMG ANRT D+ Q
Sbjct: 890 FMPISINTGTFPGTPAVRLIGDCQFLHRLCQLLLFCFFFRRTQIPRYMGAANRTNDSNTQ 949
Query: 943 -SNASAPGKVEEITKPVSAVTKSDDGLTGRAGQLVPGAKGGEEAPSGRSRVGSGNAGQGY 1001
SNA A GKVEEI KPVSAV KS+DGLTGRAGQL+ G KGGEEAPSGRSR+GSGNAGQGY
Sbjct: 950 KSNAPASGKVEEIAKPVSAVAKSEDGLTGRAGQLISGPKGGEEAPSGRSRLGSGNAGQGY 1009
Query: 1002 TFEEVKVLFMMLMELCRRTAGLQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGP 1061
TFEEVKVLFMMLMELCRRT+ LQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGP
Sbjct: 1010 TFEEVKVLFMMLMELCRRTSTLQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGP 1069
Query: 1062 HMPNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVDCANDKAKLVYSDP 1121
HM NMPRPRGADAAGLLLRELELHPP+EEW+RRNMFGGPWSDP+D+DCAND+ K+V SDP
Sbjct: 1070 HMQNMPRPRGADAAGLLLRELELHPPSEEWNRRNMFGGPWSDPDDIDCANDQPKIVCSDP 1129
Query: 1122 LDFCSSEHDDVYSGTHRLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTATWKT 1181
LD S+EH D Y GTHRLWPRKRRMSERDAAFGLN+SVGLGAYLGIMGSRRDVVTATWKT
Sbjct: 1130 LDLSSTEHCDAYDGTHRLWPRKRRMSERDAAFGLNSSVGLGAYLGIMGSRRDVVTATWKT 1189
Query: 1182 GLEGVWYKCIRCQRQTSAFASPDSTTSSNQNDRETWWISRWAYGCPMCGGTWVRVV 1237
GLEGVWYKCIRCQRQTSAF SP STTS +Q+ RE WWISRWAYGCPMCGGTWVRVV
Sbjct: 1190 GLEGVWYKCIRCQRQTSAFTSPASTTSPSQSSRELWWISRWAYGCPMCGGTWVRVV 1245
>Medtr2g013160.1 | mediator of RNA polymerase II transcription subunit
16 | HC | chr2:3502342-3493885 | 20130731
Length = 1086
Score = 1403 bits (3632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 732/1194 (61%), Positives = 841/1194 (70%), Gaps = 127/1194 (10%)
Query: 47 LDDPMEEDDQISSATVFTIRLRQSSSNLQHKMSVPELCR-NFSAVSWCGKLNAIACAAET 105
++DPM E++++ + TVF I L QS S HK++V E R NFSAV+WC KLN IACA ET
Sbjct: 17 VNDPMMEEEEVEAGTVFDISLEQSPSTSLHKITVHESMRSNFSAVAWCAKLNVIACATET 76
Query: 106 CAR-IPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSGPCALLIA 164
C IP S+ NP FWIPIHIVIPERPTE A FNV+ADS DSVQ I+WSP P ALLIA
Sbjct: 77 CVNGIPRSSVNPWFWIPIHIVIPERPTEIAAFNVVADSSLDSVQSIQWSPICCPRALLIA 136
Query: 165 NFHGRVTIWTQPSQGPPNLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXX 224
NF GRVTIWTQPS+GPPNLV D +CWQREHEWRQ+ AVVTKWLSG SPYRWL
Sbjct: 137 NFQGRVTIWTQPSRGPPNLVIDTNCWQREHEWRQETAVVTKWLSGASPYRWLSSKASAPT 196
Query: 225 XXXLTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLRWSQWPPSQNGASPKWFCTSKG 284
TF EKF+SQQ +TSARWP FLCVCSV SG VQL WSQ PP+QN PKWFCTSKG
Sbjct: 197 DSKSTFVEKFISQQPETSARWPKFLCVCSVSQSGKVQLHWSQRPPTQNATPPKWFCTSKG 256
Query: 285 LLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQVTPKTSTTSGV 344
L+ CGPSGI+A DAIITDSG +HVAGV +P+T++VW V PG GNG + +PKTS T+
Sbjct: 257 LIECGPSGIIAADAIITDSGMLHVAGVLAFSPATVIVWVVLPGQGNGLEFSPKTSITTSA 316
Query: 345 PPLSPPNWVGFAPLAAYLFSWQEYLLSEEKQGKKLTDQNLVDAVPLYCSPVSNFSAYVSP 404
P LSPPNW+GFAPL A+LFSWQ+ ++PL+CS VSNFSAYVS
Sbjct: 317 P-LSPPNWIGFAPLPAFLFSWQD------------------QSIPLHCSTVSNFSAYVSS 357
Query: 405 EAAAQSAATTTWGSGVTAVAFDPTCAGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWE 464
EAA +T GV VAFDPT GSVIA V+VEG+YMSP+DPDE SITGWRVQRWE
Sbjct: 358 EAAP-----STQCCGVAGVAFDPTRGGSVIAAVVVEGKYMSPHDPDESLSITGWRVQRWE 412
Query: 465 SSLQHVVLHPIFGNPTSNMGGQPPMQTVWQSKVDLSIPPTNDFKNHQLSASGMAIDVQKS 524
SS Q VVL+PIFG+ M G PPM+TVW+SKVD+SIP T+D
Sbjct: 413 SSFQPVVLNPIFGS----MDGNPPMRTVWESKVDISIPATDD------------------ 450
Query: 525 SEPVSDKSKRVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHVFSGPNFTPVDNY 584
KSK ++F+PFDLP + TLARVV+SA GGEIA+AF +G V +FSG NF PV NY
Sbjct: 451 ------KSKGIHFNPFDLPKYLGTLARVVFSAQGGEIAVAFFQGRVRIFSGSNFEPVTNY 504
Query: 585 QINVGSAIAAPAFSSTSCCSASVWHYTLKNCTVLKIVRVLPPSVPISQAKADSSIWERAI 644
+INVGS+I+ PAFS+TSCCSASVWH T K +LKI+RVLPP PI Q KA SS WE AI
Sbjct: 505 EINVGSSISVPAFSATSCCSASVWHDTSKGEAMLKIIRVLPPPFPIGQEKATSSTWEHAI 564
Query: 645 AERFWWSLLVGVDWWDAVGCAQSAAEDGIVSLNSVIAVLDADFHSLPSVQHRQLYGPSLD 704
+ERFW+SLLVGVDWWD VGC Q AAE+GIVS+N VIAVLDADFHSLP+ QHRQ Y LD
Sbjct: 565 SERFWFSLLVGVDWWDVVGCTQRAAEEGIVSVNGVIAVLDADFHSLPTAQHRQQYCLGLD 624
Query: 705 RIKCRLLEGSNAQEVRAMVLDMQARLLLDMLGRGIESALINSSALVPDLWQASGETLSGI 764
IKCRLL GSNAQEVRA VLDMQAR+LLDMLG+GIESALIN SAL+PD WQAS E LS
Sbjct: 625 MIKCRLLVGSNAQEVRATVLDMQARVLLDMLGKGIESALINPSALLPDPWQASEEILSNF 684
Query: 765 DPESMAVEPALIPSIQAYVDTVLDLASHFITRLRRYASFCRTLASHAVTAGSGSNRNVVX 824
D E MAVEP L P IQAYVD+V+DLASH ITRLR YA RTLA+ AVT SG
Sbjct: 685 DMEEMAVEPELTPCIQAYVDSVIDLASHLITRLRHYAKIFRTLANQAVTVASG------- 737
Query: 825 XXXXXXXXXXXXXGQNGTTSSMGSTQLQTWVQGAIAKISSTTDGGSNSAPNP-ISGPSTF 883
ST+ G N NP ISGPS+
Sbjct: 738 ---------------------------------------STSGGVPNLTLNPSISGPSSL 758
Query: 884 MPISINTGTFPGTPAVRLIGDXXXXXXXXXXXXXXXXXXXTQLPRYMGVANRTADTKPQS 943
M ISINTGTFPGTPAVRLIGD +QL RY RTA+T
Sbjct: 759 MLISINTGTFPGTPAVRLIGDCHFLHRLCQLLFFCFFFKRSQLARYKSGLRRTAET---- 814
Query: 944 NASAPGKVEEITKPVSAVTKSDDGLTGRAGQLVPGAKGGEEAPSGRSRVGSGNAGQGYTF 1003
++ +S+DG TGR Q+VPG+KGGEE G R+G+GNAGQGY+
Sbjct: 815 ----------------SLVRSNDGQTGRDRQIVPGSKGGEEPSPGPVRLGNGNAGQGYSV 858
Query: 1004 EEVKVLFMMLMELCRRTAGLQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHM 1063
EEVKV+F +L++LCRRT+GLQHPLP+SQVGSSNIQV+LHYI+G+YTVLPEVVEASLGP+M
Sbjct: 859 EEVKVIFQVLLDLCRRTSGLQHPLPVSQVGSSNIQVQLHYIEGSYTVLPEVVEASLGPYM 918
Query: 1064 PNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVDCANDKAKLVYSDPLD 1123
NMPR AD GLLLREL+LHPPAEEWH+ NMF P +D +ND K S+PLD
Sbjct: 919 QNMPRLGDADDTGLLLRELQLHPPAEEWHQLNMFVRPCTD------SNDTPKPFRSNPLD 972
Query: 1124 FCSSEHDDVYSGTHRLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTATWKTGL 1183
S E +D+ GT+ L P+KRRM ERDAAFGLNTS+GLGAYLGIMGSRRDV+T +WKTGL
Sbjct: 973 SRSLESNDIDYGTNGLRPKKRRMIERDAAFGLNTSLGLGAYLGIMGSRRDVITTSWKTGL 1032
Query: 1184 EGVWYKCIRCQRQTSAFASPDSTTSSNQNDRETWWISRWAYGCPMCGGTWVRVV 1237
EGVWYKCIRC RQTSAF S S +QN+RE+WW+SRWAY CPMCGG WVRVV
Sbjct: 1033 EGVWYKCIRCMRQTSAFTSLGSANIPHQNERESWWVSRWAYSCPMCGGRWVRVV 1086
>Medtr2g013180.1 | mediator of RNA polymerase II transcription subunit
16 | HC | chr2:3510265-3507471 | 20130731
Length = 439
Score = 523 bits (1348), Expect = e-148, Method: Compositional matrix adjust.
Identities = 284/471 (60%), Positives = 329/471 (69%), Gaps = 34/471 (7%)
Query: 769 MAVEPALIPSIQAYVDTVLDLASHFITRLRRYASFCRTLASHAVTAGSGSNRNVVXXXXX 828
MAVEPAL IQAYVD+VLDLA F TRLR YA FCRTLAS A TAG+ SN+N+V
Sbjct: 1 MAVEPALNSCIQAYVDSVLDLALSFFTRLRCYAKFCRTLASQAATAGNVSNQNMVASPAQ 60
Query: 829 XXXX-XXXXXGQNGTTSSMGSTQLQTWVQGAIAKISSTTDGGSNSAP-NPISGPSTFMPI 886
G+NGTT S GSTQ+ WVQ AIAKISST+DG SN P +PI GPS+ MPI
Sbjct: 61 NSTTPETSQGGENGTTISGGSTQMNAWVQEAIAKISSTSDGVSNLTPTSPIGGPSSLMPI 120
Query: 887 SINTGTFPGTPAVRLIGDXXXXXXXXXXXXXXXXXXXTQLPRYMGVANRTADTKPQSNAS 946
SINT TFPGTPAVRLIGD +QL YM RTA+T
Sbjct: 121 SINTETFPGTPAVRLIGDCHFLQRLCQLLFFCFFFKRSQLVLYMNGLRRTAET------- 173
Query: 947 APGKVEEITKPVSAVTKSDDGLTGRAGQLVPGAKGGEEAPSGRSRVGSGNAGQGYTFEEV 1006
++ +SDDG TGRAGQ+V G+KGGEE G R+G+GN+GQGY+F+EV
Sbjct: 174 -------------SLVRSDDGQTGRAGQIVHGSKGGEEPSLGHIRLGTGNSGQGYSFKEV 220
Query: 1007 KVLFMMLMELCRRTAGLQHPLPISQVGSSNIQVRLHYIDGNYTVLPEVVEASLGPHMPNM 1066
KV+F +LM+LCRRT+GLQHPLP+SQVGS+NIQVRLHYI+GNYTVLPEV+EASL + N+
Sbjct: 221 KVIFQVLMDLCRRTSGLQHPLPVSQVGSNNIQVRLHYIEGNYTVLPEVLEASLATQVHNI 280
Query: 1067 PRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVDCANDKAKLVYSDPLDFCS 1126
PRPRG D LLLR+LEL PPAE WHR NMFGGP +DP+ D + V S+PLD S
Sbjct: 281 PRPRGVDDTRLLLRKLELLPPAEVWHRLNMFGGPCTDPD------DSPRPVRSNPLDSRS 334
Query: 1127 SEHDDVYSGTHRLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTATWKTGLEGV 1186
E +++ GT+ LWPRK RM ERDAAF LNTS L IMGSRRDV+T +WKTGLEGV
Sbjct: 335 LESNNIDYGTNGLWPRKHRMIERDAAFALNTS------LDIMGSRRDVITTSWKTGLEGV 388
Query: 1187 WYKCIRCQRQTSAFASPDSTTSSNQNDRETWWISRWAYGCPMCGGTWVRVV 1237
WYKCIRC RQTSAF SP S NQN+RE+WW+SRWA CPMCGG WVRVV
Sbjct: 389 WYKCIRCMRQTSAFTSPASANIPNQNERESWWVSRWATNCPMCGGRWVRVV 439
>Medtr2g013190.1 | mediator of RNA polymerase II transcription
subunit 16 | HC | chr2:3514276-3510400 | 20130731
Length = 360
Score = 456 bits (1174), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/399 (60%), Positives = 270/399 (67%), Gaps = 55/399 (13%)
Query: 47 LDDPMEEDDQISSATVFTIRLRQSSSNLQHKMSVPE-LCRNFSAVSWCGKLNAIACAAET 105
++DPM E+ + + TVF IRL+QS S L HKM++ E + RNFSAV+WC KLNAIACA ET
Sbjct: 13 VNDPMIEE--VEAGTVFHIRLKQSPSTLLHKMNLHESMRRNFSAVAWCAKLNAIACATET 70
Query: 106 CARIPSSNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSGPCALLIAN 165
CARIP S+ NPPFWIPIHIVIPERPTE AVFNV+ADSP DSVQFI+WSP P ALLIAN
Sbjct: 71 CARIPRSSVNPPFWIPIHIVIPERPTENAVFNVVADSPLDSVQFIQWSPVCCPRALLIAN 130
Query: 166 FHGRVTIWTQPSQGPPNLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXX 225
FHGRVTIWTQPS GP NLV D +CW REHEWRQD AVVTKWLSG YRWL
Sbjct: 131 FHGRVTIWTQPSHGPANLVIDTNCWLREHEWRQDTAVVTKWLSG---YRWLSSKSSAPAN 187
Query: 226 XXLTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLRWSQWPPSQNGASPKWFCTSKGL 285
FEEKF+SQQSQTS P F CVCSV SGSVQL WSQWPP+QN KWFCTSKGL
Sbjct: 188 LKSIFEEKFISQQSQTSDG-PIF-CVCSVLQSGSVQLHWSQWPPTQNATLHKWFCTSKGL 245
Query: 286 LGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGNGFQVTPKTSTTSGVP 345
L CGPSGI+ GDAIITD+G + VAGVP VNP+ I+VWEV PG GN Q +PK S +GVP
Sbjct: 246 LACGPSGIITGDAIITDNGTLLVAGVPAVNPAAIIVWEVMPGRGNSLQFSPKKSINNGVP 305
Query: 346 PLSPPNWVGFAPLAAYLFSWQEYLLSEEKQGKKLTDQNLVDAVPLYCSPVSNFSAYVSPE 405
PL +S FSAYVSPE
Sbjct: 306 PL-----------------------------------------------ISKFSAYVSPE 318
Query: 406 AAAQSAATTTWGSGVTAVAFDPTCAGSVIAVVIVEGQYM 444
+A +S A TTW SGV AFDPT GSVIA VIVEG +M
Sbjct: 319 SAVKSPAPTTWCSGVAGAAFDPTRDGSVIAAVIVEGMHM 357
>Medtr1g072070.1 | mediator of RNA polymerase II transcription
subunit 16 | LC | chr1:31951369-31952796 | 20130731
Length = 282
Score = 290 bits (741), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/368 (48%), Positives = 210/368 (57%), Gaps = 87/368 (23%)
Query: 271 QNGASPKWFCTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPGPGN 330
N PKWFC SKGLL CGPSGI+AGDAIITD+G +HVAGV NP+T++V E +PG GN
Sbjct: 1 MNETQPKWFCISKGLLDCGPSGIIAGDAIITDNGTLHVAGVRAFNPATVIVCEASPGHGN 60
Query: 331 GFQVTPKTSTTSGVPPLSPPNWVGFAPLAAYLFSWQEYLLSEEKQGKKLTDQNLVDAVPL 390
G + +PKTS T+ APL
Sbjct: 61 GLEFSPKTSITTS------------APLT------------------------------- 77
Query: 391 YCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTCAGSVIAVVIVEG-QYMSPYDP 449
YVS E A TT GV VAFD C GSVI V +VE YMS ++P
Sbjct: 78 ----------YVSSEVAP-----TTQCCGVAGVAFDLMCGGSVIVVFVVEEFYYMSHHNP 122
Query: 450 DEGPSITGWRVQRWESSLQHVVLHPIFGNPTSNMGGQPPMQTVWQSKVDLSIPPTNDFKN 509
EGPS+T WRVQRWESS QHVV+HPIFG+ G P +Q VW+SKVD+SIP TND
Sbjct: 123 YEGPSVTEWRVQRWESSSQHVVIHPIFGS----FHGNPDIQMVWESKVDISIPATND--- 175
Query: 510 HQLSASGMAIDVQKSSEPVSDKSKRVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGG 569
KSK ++F+ F+ D+ TLARVVYSA GGEI +AFL GG
Sbjct: 176 ---------------------KSKEIHFNRFNFLIDLGTLARVVYSAQGGEIVVAFLYGG 214
Query: 570 VHVFSGPNFTPVDNYQINVGSAIAAPAFSSTSCCSASVWHYTLKNCTVLKIVRVLPPSVP 629
+H+FSG FT V NYQINVGS+IA FS+TS CSAS WH T K +LKI+ VLPP+ P
Sbjct: 215 IHIFSGLTFTHVANYQINVGSSIAILVFSATSYCSASAWHDTNKGDPMLKIIWVLPPTFP 274
Query: 630 ISQAKADS 637
I Q KA S
Sbjct: 275 IGQEKATS 282
>Medtr1g072060.1 | mediator of RNA polymerase II transcription
subunit 16 | HC | chr1:31951275-31949767 | 20130731
Length = 267
Score = 223 bits (568), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/238 (51%), Positives = 143/238 (60%), Gaps = 58/238 (24%)
Query: 410 SAATTTWGSGVTAVAFDPTCAGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQH 469
SAA TT GV VAFDPTC SVI V+VEG+YMSP+DP EGPSI GWR
Sbjct: 88 SAALTTKCCGVVGVAFDPTCGCSVIVFVVVEGKYMSPHDPYEGPSIIGWR---------- 137
Query: 470 VVLHPIFGNPTSNMGGQPPMQTVWQSKVDLSIPPTNDFKNHQLSASGMAIDVQKSSEPVS 529
+SKVD+SIP T+D
Sbjct: 138 ------------------------ESKVDISIPATHD----------------------- 150
Query: 530 DKSKRVNFDPFDLPSDVRTLARVVYSAHGGEIAIAFLRGGVHVFSGPNFTPVDNYQINVG 589
KSKR++F+ FDLP D+ TLARVVYSA GEI +AFL GG+H+FS FTP+ NYQINVG
Sbjct: 151 -KSKRIHFNHFDLPIDLGTLARVVYSAQDGEIVVAFLHGGIHIFSCLTFTPLANYQINVG 209
Query: 590 SAIAAPAFSSTSCCSASVWHYTLKNCTVLKIVRVLPPSVPISQAKADSSIWERAIAER 647
S+I P FS+T CCSASVWH T K +LKI+RVLPP+ PI Q KA+SS WERAIAER
Sbjct: 210 SSIVVPTFSTTCCCSASVWHGTNKGEAMLKIIRVLPPAFPIGQEKANSSTWERAIAER 267
Score = 110 bits (276), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/85 (60%), Positives = 63/85 (74%), Gaps = 1/85 (1%)
Query: 268 PPSQNGASPKWFCTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVTPG 327
PPS+ PKWFCTSKGLL CGPSGI++GDAIIT +G ++VA NP+T++VWEV+ G
Sbjct: 4 PPSKKATRPKWFCTSKGLLDCGPSGIISGDAIITHNGTLYVAAAQAFNPATVIVWEVSHG 63
Query: 328 PGNGFQVTPKTSTTSGVPPLSPPNW 352
G G + PKTS T+ PLSPPNW
Sbjct: 64 HGTGLEFAPKTSITTST-PLSPPNW 87
>Medtr2g013150.1 | mediator of RNA polymerase II transcription subunit
16 | HC | chr2:3491448-3490793 | 20130731
Length = 164
Score = 180 bits (457), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/153 (64%), Positives = 108/153 (70%), Gaps = 17/153 (11%)
Query: 1063 MPNMPRPRGADAAGLLLRELELHPPAEEWHRRNMFGGPWSDPEDVDCANDKAKLVYSDPL 1122
M NMPR R A AGLL+RELELH PAE+ HR NMFGGP +D D C ND V S+PL
Sbjct: 3 MQNMPRSRVAGVAGLLVRELELHSPAEDCHRLNMFGGPCTDLGDEGCRNDAPTPVTSNPL 62
Query: 1123 DFCSSEHDDVYSGTHRLWPRKRRMSERDAAFGLNTSVGLGAYLGIMGSRRDVVTATWKTG 1182
D ++ LWPRKRRMSERDAAFGL+TSV LGAYLGIMGSRR++VT WKTG
Sbjct: 63 D------------SNGLWPRKRRMSERDAAFGLSTSVDLGAYLGIMGSRREIVTTLWKTG 110
Query: 1183 LEGVWYKCIRCQRQTSAFASPDSTTSSNQNDRE 1215
LEGVWYK QTS+FASPDST QNDRE
Sbjct: 111 LEGVWYKW-----QTSSFASPDSTNPPIQNDRE 138
>Medtr4g010370.1 | mediator of RNA polymerase II transcription
subunit 16 | HC | chr4:2352171-2354538 | 20130731
Length = 153
Score = 134 bits (337), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 78/115 (67%), Gaps = 14/115 (12%)
Query: 112 SNANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQF----IEWSPTSGPCALLIANFH 167
S+ NP FWIPI IVIPERPTE A FNV+A + + I+WSP P ALLIANF
Sbjct: 12 SSVNPRFWIPIQIVIPERPTEIAAFNVVAGTLMSWLFHNYCSIQWSPVCCPRALLIANFQ 71
Query: 168 GRVTIWTQPSQ----------GPPNLVRDASCWQREHEWRQDIAVVTKWLSGVSP 212
GRVTIWTQPSQ GP N+V D +CWQ EHEWRQD AVVTKWLSG SP
Sbjct: 72 GRVTIWTQPSQCLYLPLFSIHGPTNIVIDTNCWQCEHEWRQDTAVVTKWLSGASP 126
>Medtr5g040120.1 | mediator of RNA polymerase II transcription subunit
16 | LC | chr5:17660730-17663169 | 20130731
Length = 109
Score = 104 bits (260), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/92 (59%), Positives = 63/92 (68%), Gaps = 16/92 (17%)
Query: 967 GLTGRAGQLVPGAKGGEEAPSGRSRVGSGNAGQGYTFEEVKVLFMMLMELCRRTAGLQHP 1026
G TGRAG R+G+GN GQGYT EEV LF+ L EL RRTAGLQHP
Sbjct: 17 GQTGRAG----------------PRLGTGNGGQGYTKEEVNALFVALNELSRRTAGLQHP 60
Query: 1027 LPISQVGSSNIQVRLHYIDGNYTVLPEVVEAS 1058
LP+SQVGS+NIQV LHYI+G+YTVLPE A+
Sbjct: 61 LPVSQVGSNNIQVWLHYIEGSYTVLPEAKPAA 92
>Medtr7g039500.1 | mediator of RNA polymerase II transcription subunit
16 | LC | chr7:14685352-14684919 | 20130731
Length = 110
Score = 103 bits (258), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/78 (65%), Positives = 62/78 (79%), Gaps = 2/78 (2%)
Query: 983 EEAPSGRS--RVGSGNAGQGYTFEEVKVLFMMLMELCRRTAGLQHPLPISQVGSSNIQVR 1040
E+ +GR+ R+G+ N GQGYT EEV LF+ L EL RRTAGLQHPLP+SQVGS+NIQV
Sbjct: 3 EKCQTGRAGPRLGTENGGQGYTKEEVNALFVALNELSRRTAGLQHPLPVSQVGSNNIQVW 62
Query: 1041 LHYIDGNYTVLPEVVEAS 1058
LHYI+G+YTVLPE A+
Sbjct: 63 LHYIEGSYTVLPEAKPAA 80
>Medtr3g057920.1 | hypothetical protein | LC |
chr3:22926789-22925810 | 20130731
Length = 129
Score = 75.5 bits (184), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 55/92 (59%), Gaps = 14/92 (15%)
Query: 307 HVAGVPIVNPSTIVVWEVTPGPGNGFQVTPKTSTTSGVPPLSPPNWVGFAPLAAYLFSWQ 366
HV GVPI NPST+++WEV NG Q+TPKTS + VPP + Y +
Sbjct: 5 HVVGVPIDNPSTVILWEVMFRLVNGLQLTPKTSINNRVPPPT-----------TYNLGRR 53
Query: 367 EYLLSEEKQGKKLTDQNLVDAVPLYCSPVSNF 398
EY +EKQ + L DQNL +++ L+CSPVS +
Sbjct: 54 EY---KEKQWRNLEDQNLGESISLHCSPVSMY 82
>Medtr3g057930.1 | transmembrane protein, putative | LC |
chr3:22926926-22927348 | 20130731
Length = 114
Score = 72.4 bits (176), Expect = 3e-12, Method: Composition-based stats.
Identities = 54/138 (39%), Positives = 71/138 (51%), Gaps = 29/138 (21%)
Query: 308 VAGVPIVNPSTIVVWEVTPGPGNGFQVTPKTSTTSGVPPLSPPNWVGFAPLAAYLFSWQE 367
V GV I NPST+VV +V GF+ LAAYL
Sbjct: 2 VGGVQIDNPSTVVVRKVMHR--------------------------GFSFLAAYLLVVLI 35
Query: 368 YLLSEEKQGKK-LTDQNLVDAVPLYCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFD 426
++ GKK TDQN+V+++P + SP+S S YV A QS TTT S +T VAFD
Sbjct: 36 ISYLSKRNGKKNQTDQNIVESIPHHNSPISISSTYVI--ATVQSPLTTTSCSRITKVAFD 93
Query: 427 PTCAGSVIAVVIVEGQYM 444
P GS++AVVIV+G ++
Sbjct: 94 PIHCGSMLAVVIVDGMHL 111