Miyakogusa Predicted Gene

Lj4g3v0450840.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450840.2 Non Characterized Hit- tr|I1KLI0|I1KLI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42126
PE,86.45,0,seg,NULL; dsrm,Double-stranded RNA-binding; NIF,NLI
interacting factor; DS_RBD,Double-stranded RNA-b,CUFF.47230.2
         (955 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g089010.1 | double-stranded RNA-binding motif protein | HC...  1578   0.0  
Medtr7g067540.1 | double-stranded RNA-binding motif protein | HC...   622   e-178
Medtr4g089000.1 | carboxy-terminal domain phosphatase-like prote...   127   4e-29

>Medtr4g089010.1 | double-stranded RNA-binding motif protein | HC |
           chr4:35626275-35616452 | 20130731
          Length = 958

 Score = 1578 bits (4086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 782/964 (81%), Positives = 833/964 (86%), Gaps = 15/964 (1%)

Query: 1   MYKSVVYQGEVVLGEVDIYPEVTNNFNYNKNHLDDDLMMKEIRISNFSQPSERCLPLAVL 60
           MYKSVVYQGEV+LGEVDIYPEV NN N    + D    +KEIRI+ FSQPSERC PLAVL
Sbjct: 1   MYKSVVYQGEVMLGEVDIYPEVNNNINNKNKNFD----VKEIRITQFSQPSERCSPLAVL 56

Query: 61  HTVTSCGVCFKMESKTQQQDGLFHLHSLCIRENKTAVMPLRGEELHLVAMHSRNDDRPCF 120
           HT+T+  VCFKMESKTQ Q+ L HLHSLCIRENKTAVMPL GEELHLVAMHSRNDDRPCF
Sbjct: 57  HTITT--VCFKMESKTQHQNQLLHLHSLCIRENKTAVMPLYGEELHLVAMHSRNDDRPCF 114

Query: 121 WGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINYEVDPQR 180
           WGFIVA GLY+S +V+LNLRCLGIVFDLDETL+VANTMRSFEDRIDALQRK+N EVDPQR
Sbjct: 115 WGFIVATGLYNSSVVLLNLRCLGIVFDLDETLVVANTMRSFEDRIDALQRKVNSEVDPQR 174

Query: 181 ISGMQAEIKRYLDDKSILKQYAENDLVVDNGKVIKVQSEIVPALSDSHQAIVRPLIRLQE 240
           ISGMQAEIKRY +DKSILKQYAEND VVDNGKVIKVQSE+VPALSDSHQ IVRPLIRL E
Sbjct: 175 ISGMQAEIKRYQEDKSILKQYAENDQVVDNGKVIKVQSELVPALSDSHQPIVRPLIRLHE 234

Query: 241 KNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLL 300
           KNIILTRINPQIRDTSVLVRLRPAWEDLRSYL ARGRKRFEV+VCTMAERDYALEMWRLL
Sbjct: 235 KNIILTRINPQIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVFVCTMAERDYALEMWRLL 294

Query: 301 DPDSNLINSKELLARIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVH 360
           DPDSNLIN+KELL RIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVH
Sbjct: 295 DPDSNLINAKELLGRIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRVH 354

Query: 361 VVPAFAPYYAPQAEASNTVPVLCVARNVACNVRGGFFKEFDDGLLPKISLIAYEDDIKAI 420
           VVPAFAPYYAPQAEASNT+PVLCVARNVACNVRGGFFK+FDDGLL KI  IAYEDDIK I
Sbjct: 355 VVPAFAPYYAPQAEASNTIPVLCVARNVACNVRGGFFKDFDDGLLQKIPQIAYEDDIKDI 414

Query: 421 PPAPDVSNYLVQEDDGSVSNGNREPLMFDGMADAEVERKLKDAISVASVMPVTTANLDPR 480
           PPAPDVSNYLV EDDGS S GNR+P +FDGMADAEVERKLKDAIS  S +P+TTA LDPR
Sbjct: 415 PPAPDVSNYLVSEDDGSASYGNRDPFLFDGMADAEVERKLKDAISATSAIPMTTAKLDPR 474

Query: 481 LTSSLQYTMVSSGSVPPPTAQAPMVQLSHVQFPQPTSLVK------ALESSLHSSPAREE 534
           LTSSLQYTMVS GSVPPP   A M+QL H QF QP + VK       LESSLHSSPAREE
Sbjct: 475 LTSSLQYTMVSPGSVPPPAPHASMIQLPHTQFLQPATPVKPMVQVAPLESSLHSSPAREE 534

Query: 535 GEVPESELDPDTRRRLLILQHGQDTRDHASSEPPFPMRHPVPV-ATPRVPSRGGWFPAEE 593
           GEV ESELDPDTRRRLLILQHGQD RDH SSEPPFP+RHP PV  + R PSRGGWFP EE
Sbjct: 535 GEVGESELDPDTRRRLLILQHGQDIRDHTSSEPPFPVRHPNPVQVSTRAPSRGGWFPVEE 594

Query: 594 EIGSQPLNRVVPREFPVDSGPLRIEKHRPHHPPFFSKVDSSISSDRILHESHQRLPKEMY 653
           EIGSQP NRV+P+E  VDSGP R+EKHRPH P FFSKVD SISSDR LHESHQRLPKE+Y
Sbjct: 595 EIGSQPPNRVLPKEILVDSGPSRMEKHRPHQPSFFSKVDGSISSDRALHESHQRLPKEIY 654

Query: 654 HRDDRPRLSHN--SFHSLXXXXXXXXXXXXXXXXXXXXXGHSVLHADAPAVVLQDIALKC 711
           HRDDR R++H   S+HSL                     G+SVLHA+ PA VLQ+IALKC
Sbjct: 655 HRDDRSRVNHMLPSYHSLSGDDILFGRSSSSHRDLDSESGNSVLHAETPAAVLQEIALKC 714

Query: 712 GTKVAFTSSLVASTELQFSVEAWFSGKKIGHGFGKTRKEAQDKAAEDSIKHLADIYLSRG 771
           GTKV +TSSLVAS ELQFSVEAWFSGKK+G G G+TR EA+ KAAEDSIKHLADIYLSR 
Sbjct: 715 GTKVEYTSSLVASRELQFSVEAWFSGKKVGQGIGRTRMEARYKAAEDSIKHLADIYLSRA 774

Query: 772 KDELGSTYGDVGGIPNSSDNGYMGNGSSLGNQPLPKEVSVSFSTASDPSRALDPRLEVSK 831
           KDE GS YGDV G PN++DNGY+GN SSLGN PLPKE +VSFS ASD SR LDPRLEVSK
Sbjct: 775 KDEPGSAYGDVSGFPNANDNGYVGNVSSLGNHPLPKEEAVSFSAASDLSRVLDPRLEVSK 834

Query: 832 RSMGSISALKELCTTEGLGVSFLSLPAPASTNSVQKDEVHAQVEIDGQVFGKGIGLTWDE 891
           RS GS+SALKELC  EGLGV+FLS+PAP STNSVQKDEV+AQVEIDGQV+GKG GLTWDE
Sbjct: 835 RSTGSVSALKELCMMEGLGVNFLSVPAPLSTNSVQKDEVYAQVEIDGQVYGKGTGLTWDE 894

Query: 892 AKMQAAEKALGSLRTMYGQSIQRRQSSPRPLQGMSNKRLKQEYPRTLQRIPSSARYPRNA 951
           AKMQAAEKALGSLR M+G SIQRRQSSPRP QG SNKRLKQE+PRTLQR  SS RYPRNA
Sbjct: 895 AKMQAAEKALGSLRPMHGHSIQRRQSSPRPFQGFSNKRLKQEHPRTLQRFASSGRYPRNA 954

Query: 952 PPIP 955
           P IP
Sbjct: 955 PAIP 958


>Medtr7g067540.1 | double-stranded RNA-binding motif protein | HC |
           chr7:24674961-24664385 | 20130731
          Length = 796

 Score =  622 bits (1603), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 363/824 (44%), Positives = 501/824 (60%), Gaps = 65/824 (7%)

Query: 3   KSVVYQGEVVLGEVDIYPEVT-NNFNYNKNHLDDDLMMKEIRISNFSQPSERCLPLAVLH 61
           K  V++G+  LGE+D +P +   NF +  N         EI I + +  SERC PL++L 
Sbjct: 7   KVEVFEGDARLGELDYFPVIAFQNFRFPNN---------EIHIHHRTFRSERCPPLSILQ 57

Query: 62  TVTSCGVCFKMESK-TQQQDGLFHLHSLCIRENKTAVMPLRGEELHLVAMHSRNDDRPCF 120
           +V++  V  K++S  + +Q  L +LH+    E KTAV  +  EELHLVAM S+    PCF
Sbjct: 58  SVSAFNVRCKLDSSLSVEQPLLINLHASMFHEMKTAVAVIGDEELHLVAMPSKRKKFPCF 117

Query: 121 WGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSFEDRIDALQRKINYEVDPQR 180
           W + V   LYD+C+ MLNLRCL IVFDLDETLIVANTM+SFEDRIDAL+  ++ E DP R
Sbjct: 118 WCYTVPARLYDACMGMLNLRCLSIVFDLDETLIVANTMKSFEDRIDALRSWLSRETDPSR 177

Query: 181 ISGMQAEIKRYLDDKSILKQYAENDLVVD-NGKVIKVQSEIVPALSDSHQAIVRPLIRLQ 239
           + GM  E+KRYL+D+ +LKQ+AE+D VVD NG+  +VQ E VP+LS+  Q ++RP++RLQ
Sbjct: 178 VQGMSGELKRYLEDRLLLKQFAESDCVVDGNGRQYQVQMEEVPSLSE--QKVMRPVVRLQ 235

Query: 240 EKNIILTRINPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRL 299
           ++NI+LTRINP+IRDTSVLVRLRPAWEDLR YLTA+GRKRFEVYVCTMAERDYALEMWRL
Sbjct: 236 DRNIVLTRINPEIRDTSVLVRLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRL 295

Query: 300 LDPDSNLINSKELLARIVCVKSGLKKSLFNVFQDGSCHPKMALVIDDRLKVWDEKDQPRV 359
           LDP ++LI SK++  R++CVKSG +KSL NVF DG CHPKMA+VIDDR KVW++KDQPRV
Sbjct: 296 LDPGAHLIGSKQVFDRVICVKSGSRKSLLNVFHDGMCHPKMAMVIDDRSKVWEDKDQPRV 355

Query: 360 HVVPAFAPYYAPQAEASNTVPVLCVARNVACNVRGGFFKEFDDGLLPKISLIAYEDDIKA 419
           HVVPAF PYYAPQAE +N VPVLCVARNVACNVRG FFKEFD+  L +I+ I +ED++ +
Sbjct: 356 HVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENYLQRIAEIFFEDEVGS 415

Query: 420 IPPAPDVSNYLVQEDDGSVSNGNREPLMFDGMADAEVERKLKDAISVASVMPVTTANLDP 479
           +P  PDVS+YL+ E+   V NGN    + +GMA AEVER+L                 D 
Sbjct: 416 LPHPPDVSSYLMSEE---VPNGNGNAPISEGMAGAEVERRLNQP--------------DD 458

Query: 480 RLTSSL-QYTMVSSGSVPPPTAQAPMVQLSHVQFPQPTSLVKALESSLHSSPAREEGEVP 538
           +L++ L    MV+S            V+  H +  QPT+ +    +   SS      + P
Sbjct: 459 KLSADLVSRPMVNS------------VEFRH-ETSQPTAGITPNVAGPGSSRPLIPSQKP 505

Query: 539 ESELDPDTRRRLLILQHGQDTRDHASSEPPFPMRHPVPVATPRVPSRGGWFPAEEEIGSQ 598
              ++ +   RL         R  +S+EPP        ++ P +PS GGW   +++I ++
Sbjct: 506 GLTINYEAWSRL---------RGQSSAEPPL-------ISRPPIPSYGGWL-VDDDISNK 548

Query: 599 PLNRVVPREFPVDSGPLRIEKHRPHHPPFFSKVDSSISSDRILHESHQRLPKEMYHRDDR 658
                 P     +S   + EKH+    PF  +++ S S+   L ++ +   +E     D 
Sbjct: 549 TQTNNWPFASAKESNLPKSEKHQAQPKPFSHRMEVSAST-VPLSQASKLKAEEATSVSDF 607

Query: 659 PRLSHNSFHSLXXXXXXXXXXXXXXXXXXXXXGHSVLHADAPAVVLQDIALKCGTKVAFT 718
            R +  S   L                     G           VLQ+I  +C +KV F 
Sbjct: 608 QRRNIPSKSRLTEDVISPNHTSSNSKDFQNEVGK--FDPSLSIGVLQEIGKRCSSKVEFK 665

Query: 719 SSLVASTELQFSVEAWFSGKKIGHGFGKTRKEAQDKAAEDSIKHLADIYLSRGKDELGST 778
             +  S +LQFSVE  F+G+KIG G G+TRK+AQ +AAE++++ LA+ YL   + +  + 
Sbjct: 666 PIVSTSKDLQFSVEVLFTGEKIGFGMGRTRKDAQQQAAENALRSLAEKYLGHMEPQSKAV 725

Query: 779 YGDVGGIPNSSDNGYMGNGSSLGNQPLPKEVSVSFSTASDPSRA 822
             +   +    +NG++ +  +  +  L  E  +   +AS+ S A
Sbjct: 726 NTEFDKLSIEHENGFLWDVVNPESVELQTEDGLQRESASEASDA 769


>Medtr4g089000.1 | carboxy-terminal domain phosphatase-like protein,
           putative | LC | chr4:35609246-35606843 | 20130731
          Length = 162

 Score =  127 bits (320), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 63/88 (71%), Positives = 67/88 (76%)

Query: 868 DEVHAQVEIDGQVFGKGIGLTWDEAKMQAAEKALGSLRTMYGQSIQRRQSSPRPLQGMSN 927
           D  H  VEIDGQV+GKG GLTW+ AKMQAAEKALGS RTM+GQ IQR QSSPRP QG S 
Sbjct: 75  DAPHRLVEIDGQVYGKGTGLTWNVAKMQAAEKALGSQRTMHGQGIQRWQSSPRPFQGFSY 134

Query: 928 KRLKQEYPRTLQRIPSSARYPRNAPPIP 955
           KRLKQE+ R LQ   SS RY RNA  IP
Sbjct: 135 KRLKQEHSRILQGFASSGRYRRNATAIP 162



 Score =  124 bits (312), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 59/78 (75%), Positives = 66/78 (84%), Gaps = 2/78 (2%)

Query: 102 GEELHLVAMHSRNDDRPCFWGFIVAVGLYDSCLVMLNLRCLGIVFDLDETLIVANTMRSF 161
           G+   LVA+HS NDDRPCFWGFIV +GLY+S LVMLNLRCLGIVFDLDETL+VANTMRSF
Sbjct: 11  GKNYILVALHSWNDDRPCFWGFIVPMGLYNSSLVMLNLRCLGIVFDLDETLVVANTMRSF 70

Query: 162 EDRIDALQRKINYEVDPQ 179
           EDRIDA  R +  E+D Q
Sbjct: 71  EDRIDAPHRLV--EIDGQ 86