Miyakogusa Predicted Gene
- Lj4g3v0450550.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0450550.1 Non Characterized Hit- tr|I1KVG3|I1KVG3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,25.88,2e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.47225.1
(539 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g066250.1 | PPR containing plant-like protein | HC | chr8:... 898 0.0
Medtr4g113830.1 | organelle transcript processing protein, putat... 412 e-115
Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 404 e-112
Medtr7g093900.2 | PPR containing plant-like protein | HC | chr7:... 397 e-110
Medtr7g011840.1 | PPR containing plant-like protein | HC | chr7:... 394 e-110
Medtr7g093900.1 | PPR containing plant-like protein | HC | chr7:... 389 e-108
Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC | ... 386 e-107
Medtr7g105440.1 | PPR containing plant-like protein | HC | chr7:... 384 e-106
Medtr7g105540.1 | PPR containing plant-like protein | HC | chr7:... 377 e-104
Medtr4g098940.1 | PPR containing plant-like protein | HC | chr4:... 377 e-104
Medtr3g096420.1 | PPR containing plant-like protein | HC | chr3:... 377 e-104
Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC | ... 376 e-104
Medtr7g056073.1 | basic helix loop helix protein, putative | HC ... 376 e-104
Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 374 e-103
Medtr7g005870.1 | PPR containing plant-like protein | HC | chr7:... 371 e-103
Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 369 e-102
Medtr5g018690.1 | PPR containing protein | HC | chr5:6968759-697... 364 e-100
Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 364 e-100
Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC | ... 363 e-100
Medtr3g109380.2 | PPR containing plant-like protein | HC | chr3:... 362 e-100
Medtr3g109380.1 | PPR containing plant-like protein | HC | chr3:... 362 e-100
Medtr8g065730.2 | PPR containing plant-like protein | HC | chr8:... 360 2e-99
Medtr8g065730.1 | PPR containing plant-like protein | HC | chr8:... 360 2e-99
Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC | ... 360 3e-99
Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 360 3e-99
Medtr5g006420.1 | organelle transcript processing protein, putat... 359 4e-99
Medtr8g069550.1 | PPR containing plant-like protein | HC | chr8:... 358 6e-99
Medtr8g069550.2 | PPR containing plant-like protein | HC | chr8:... 358 6e-99
Medtr3g052720.1 | organelle transcript processing protein, putat... 357 1e-98
Medtr2g018870.1 | PPR containing plant-like protein | HC | chr2:... 355 8e-98
Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 355 9e-98
Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC | ... 355 9e-98
Medtr4g119120.1 | PPR containing plant-like protein | HC | chr4:... 352 7e-97
Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 ... 350 2e-96
Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 350 2e-96
Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC | ... 350 3e-96
Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC | ... 349 3e-96
Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 348 6e-96
Medtr7g076707.1 | PPR containing plant-like protein | HC | chr7:... 348 8e-96
Medtr1g014340.1 | PPR containing plant-like protein | HC | chr1:... 344 1e-94
Medtr1g014340.2 | PPR containing plant-like protein | HC | chr1:... 344 1e-94
Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 344 1e-94
Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 343 2e-94
Medtr8g027150.1 | PPR containing plant-like protein | HC | chr8:... 343 2e-94
Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 343 3e-94
Medtr2g086150.1 | PPR containing plant-like protein | HC | chr2:... 342 6e-94
Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-842602... 342 8e-94
Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 341 1e-93
Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 340 2e-93
Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 340 3e-93
Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC | ... 339 3e-93
Medtr2g036960.1 | PPR containing plant-like protein | HC | chr2:... 338 6e-93
Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 338 6e-93
Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 338 7e-93
Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC | ... 338 1e-92
Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC | ... 338 1e-92
Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 337 3e-92
Medtr4g131300.1 | PPR containing plant-like protein | HC | chr4:... 336 3e-92
Medtr8g086560.1 | PPR containing plant protein | HC | chr8:35911... 335 6e-92
Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 335 7e-92
Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC | ... 335 8e-92
Medtr2g071810.1 | PPR containing plant-like protein | HC | chr2:... 334 1e-91
Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC | ... 333 2e-91
Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC | ... 332 4e-91
Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 332 5e-91
Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 332 8e-91
Medtr4g086490.1 | PPR containing plant protein | HC | chr4:33903... 331 1e-90
Medtr4g074150.2 | PPR containing plant-like protein | HC | chr4:... 331 1e-90
Medtr4g074150.1 | PPR containing plant-like protein | HC | chr4:... 331 1e-90
Medtr5g091640.1 | PPR containing plant-like protein | HC | chr5:... 330 2e-90
Medtr4g133610.1 | PPR containing plant-like protein | HC | chr4:... 330 3e-90
Medtr8g105210.1 | PPR containing plant-like protein | HC | chr8:... 329 4e-90
Medtr4g011730.1 | PPR containing plant-like protein | HC | chr4:... 329 4e-90
Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 328 7e-90
Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 328 7e-90
Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC | ... 328 8e-90
Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC | ... 327 2e-89
Medtr5g020650.1 | PPR containing plant-like protein | HC | chr5:... 327 2e-89
Medtr7g417770.1 | PPR containing plant-like protein | HC | chr7:... 326 3e-89
Medtr7g017700.1 | PPR containing plant-like protein | HC | chr7:... 326 3e-89
Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putati... 325 5e-89
Medtr2g007570.1 | PPR containing plant-like protein | HC | chr2:... 325 8e-89
Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 325 8e-89
Medtr6g059820.1 | PPR containing plant-like protein | HC | chr6:... 324 1e-88
Medtr2g087120.1 | PPR containing plant-like protein | HC | chr2:... 324 2e-88
Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 324 2e-88
Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC | ... 324 2e-88
Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 323 3e-88
Medtr6g018720.1 | PPR containing plant-like protein | HC | chr6:... 323 4e-88
Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC | ... 322 4e-88
Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 322 6e-88
Medtr7g103230.1 | PPR containing plant-like protein | HC | chr7:... 322 6e-88
Medtr2g013500.1 | PPR containing plant-like protein | HC | chr2:... 321 1e-87
Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC | ... 320 2e-87
Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC | ... 320 3e-87
Medtr1g067280.1 | PPR containing plant-like protein | HC | chr1:... 320 3e-87
Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 319 3e-87
Medtr8g068150.1 | SLOW growth protein, putative | HC | chr8:2840... 318 8e-87
Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC | ... 318 1e-86
Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC | ... 317 1e-86
Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 317 1e-86
Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC | ... 317 1e-86
Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 317 2e-86
Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC | ... 317 2e-86
Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 316 5e-86
Medtr6g093170.1 | PPR containing protein | HC | chr6:35177726-35... 315 6e-86
Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC | ... 315 7e-86
Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC | ... 315 8e-86
Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC | ... 315 8e-86
Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC | ... 314 1e-85
Medtr8g028890.1 | PPR containing plant-like protein | HC | chr8:... 312 5e-85
Medtr8g098250.1 | PPR containing plant-like protein | HC | chr8:... 312 6e-85
Medtr4g108890.1 | PPR containing plant-like protein | HC | chr4:... 312 6e-85
Medtr4g087150.1 | PPR containing plant-like protein | HC | chr4:... 312 6e-85
Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC | ... 311 8e-85
Medtr2g101710.1 | PPR containing plant protein | HC | chr2:43758... 310 2e-84
Medtr1g012380.1 | PPR containing plant-like protein | HC | chr1:... 310 2e-84
Medtr7g078420.1 | PPR containing plant-like protein | HC | chr7:... 310 2e-84
Medtr1g038860.1 | PPR containing plant-like protein | LC | chr1:... 310 2e-84
Medtr4g015760.4 | PPR containing plant-like protein | HC | chr4:... 309 4e-84
Medtr4g015760.1 | PPR containing plant-like protein | HC | chr4:... 309 4e-84
Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC | ... 309 5e-84
Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC | ... 309 6e-84
Medtr4g015760.2 | PPR containing plant-like protein | HC | chr4:... 309 6e-84
Medtr4g015760.3 | PPR containing plant-like protein | HC | chr4:... 309 6e-84
Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 308 7e-84
Medtr1g073160.1 | PPR containing plant-like protein | HC | chr1:... 308 9e-84
Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 307 1e-83
Medtr8g105720.1 | PPR containing plant-like protein | HC | chr8:... 307 1e-83
Medtr3g072900.1 | PPR containing plant-like protein | HC | chr3:... 307 2e-83
Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 305 5e-83
Medtr7g078360.1 | PPR containing plant-like protein | HC | chr7:... 305 1e-82
Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 304 1e-82
Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC | ... 304 1e-82
Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC | ... 303 3e-82
Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC | ... 302 5e-82
Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 302 6e-82
Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC | ... 302 6e-82
Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC | ... 301 9e-82
Medtr1g103660.1 | PPR containing plant-like protein | HC | chr1:... 300 2e-81
Medtr8g031210.2 | PPR containing plant-like protein | HC | chr8:... 300 2e-81
Medtr8g031210.1 | PPR containing plant-like protein | HC | chr8:... 299 4e-81
Medtr8g031210.3 | PPR containing plant-like protein | HC | chr8:... 299 4e-81
Medtr8g087980.1 | PPR containing plant-like protein | HC | chr8:... 299 4e-81
Medtr3g096440.1 | PPR containing plant-like protein | HC | chr3:... 298 6e-81
Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 298 1e-80
Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC | ... 298 1e-80
Medtr0011s0300.1 | PPR containing plant-like protein | HC | scaf... 298 1e-80
Medtr1g114220.1 | PPR containing plant-like protein | HC | chr1:... 297 1e-80
Medtr3g026690.1 | PPR containing plant-like protein | HC | chr3:... 296 3e-80
Medtr2g021710.1 | PPR containing plant-like protein | HC | chr2:... 296 4e-80
Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC | ... 296 5e-80
Medtr1g059720.1 | organelle transcript processing protein, putat... 295 8e-80
Medtr7g032360.1 | PPR containing plant-like protein | HC | chr7:... 295 9e-80
Medtr3g466010.1 | PPR containing plant-like protein | HC | chr3:... 295 1e-79
Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC | ... 295 1e-79
Medtr5g098860.1 | PPR containing plant-like protein | HC | chr5:... 294 2e-79
Medtr5g024360.1 | PPR containing plant-like protein | HC | chr5:... 294 2e-79
Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 293 2e-79
Medtr4g082470.1 | PPR containing plant-like protein | HC | chr4:... 293 3e-79
Medtr1g083890.1 | PPR containing plant-like protein | HC | chr1:... 293 3e-79
Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC | ... 293 3e-79
Medtr4g118700.1 | PPR containing plant-like protein | HC | chr4:... 293 4e-79
Medtr4g074470.1 | PPR containing plant-like protein | HC | chr4:... 292 7e-79
Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC | ... 292 7e-79
Medtr1g040000.1 | PPR containing plant-like protein | HC | chr1:... 291 1e-78
Medtr8g066670.1 | chlororespiratory reduction protein, putative ... 291 1e-78
Medtr4g108030.1 | PPR containing plant-like protein | HC | chr4:... 291 1e-78
Medtr1g084570.1 | PPR containing plant-like protein | HC | chr1:... 290 2e-78
Medtr5g008690.1 | PPR containing plant-like protein | HC | chr5:... 290 3e-78
Medtr2g035620.1 | PPR containing plant protein | HC | chr2:15068... 290 3e-78
Medtr5g012660.1 | PPR containing plant-like protein | HC | chr5:... 289 5e-78
Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 289 5e-78
Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC | ... 288 1e-77
Medtr4g014050.1 | PPR containing plant-like protein | HC | chr4:... 288 1e-77
Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 287 1e-77
Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 287 2e-77
Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 3e-77
Medtr5g043780.1 | PPR containing plant-like protein | HC | chr5:... 286 3e-77
Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC | ... 286 4e-77
Medtr3g011920.1 | PPR containing plant-like protein | HC | chr3:... 286 4e-77
Medtr4g007160.1 | PPR containing plant-like protein | HC | chr4:... 285 9e-77
Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC | ... 284 2e-76
Medtr8g075460.1 | PPR containing plant-like protein | HC | chr8:... 283 3e-76
Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 283 4e-76
Medtr6g066360.1 | PPR containing plant-like protein | HC | chr6:... 281 8e-76
Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 281 8e-76
Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |... 281 1e-75
Medtr7g082690.1 | PPR containing plant-like protein | HC | chr7:... 281 1e-75
Medtr2g024080.1 | PPR containing plant-like protein | HC | chr2:... 280 3e-75
Medtr2g049310.1 | PPR containing plant-like protein | HC | chr2:... 279 4e-75
Medtr4g108660.1 | PPR containing plant-like protein | HC | chr4:... 279 4e-75
Medtr8g035960.1 | PPR containing plant-like protein | HC | chr8:... 277 2e-74
Medtr8g074780.1 | PPR containing plant-like protein | HC | chr8:... 277 2e-74
Medtr3g101700.1 | PPR containing plant-like protein | HC | chr3:... 277 2e-74
Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC | ... 277 2e-74
Medtr3g111500.1 | PPR containing plant-like protein | HC | chr3:... 276 4e-74
Medtr5g043450.1 | PPR containing plant-like protein | HC | chr5:... 275 6e-74
Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 273 2e-73
Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC | ... 273 2e-73
Medtr3g005330.1 | PPR containing plant-like protein | HC | chr3:... 273 3e-73
Medtr5g044260.1 | PPR containing plant-like protein | HC | chr5:... 272 5e-73
Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC | ... 272 7e-73
Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 272 7e-73
Medtr4g073930.1 | PPR containing plant-like protein | HC | chr4:... 270 2e-72
Medtr5g024100.1 | PPR containing plant-like protein | HC | chr5:... 270 2e-72
Medtr2g072010.1 | PPR containing plant-like protein | HC | chr2:... 270 3e-72
Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 270 3e-72
Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 266 3e-71
Medtr2g009760.1 | PPR containing plant-like protein | HC | chr2:... 266 5e-71
Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC | ... 265 8e-71
Medtr4g068900.1 | PPR containing plant-like protein | HC | chr4:... 264 2e-70
Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC | ... 263 4e-70
Medtr4g023510.1 | PPR containing plant-like protein | HC | chr4:... 262 5e-70
Medtr2g016780.1 | editing factor, putative | HC | chr2:5197710-5... 262 6e-70
Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465... 261 1e-69
Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 260 3e-69
Medtr3g117150.1 | organelle transcript processing protein, putat... 259 4e-69
Medtr5g071190.1 | PPR containing plant-like protein | HC | chr5:... 259 5e-69
Medtr3g080230.1 | PPR containing plant-like protein | HC | chr3:... 259 6e-69
Medtr3g080230.2 | PPR containing plant-like protein | HC | chr3:... 259 6e-69
Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC | ... 259 7e-69
Medtr7g108530.1 | PPR containing plant-like protein | HC | chr7:... 258 1e-68
Medtr5g038580.1 | PPR containing plant-like protein | HC | chr5:... 258 1e-68
Medtr8g102760.1 | PPR containing plant-like protein | HC | chr8:... 256 4e-68
Medtr7g113540.1 | PPR containing plant-like protein | HC | chr7:... 256 5e-68
Medtr1g052100.1 | PPR containing plant-like protein | HC | chr1:... 254 2e-67
Medtr2g019350.1 | PPR containing plant-like protein | HC | chr2:... 253 2e-67
Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC | ... 253 4e-67
Medtr7g082550.1 | PPR containing plant-like protein | HC | chr7:... 252 7e-67
Medtr3g063220.1 | PPR containing plant-like protein | HC | chr3:... 251 1e-66
Medtr4g078750.1 | PPR containing plant-like protein | HC | chr4:... 251 1e-66
Medtr5g018370.1 | PPR containing plant-like protein | HC | chr5:... 251 1e-66
Medtr8g063450.1 | PPR containing plant-like protein | HC | chr8:... 250 2e-66
Medtr5g025580.1 | PPR containing plant-like protein | HC | chr5:... 250 2e-66
Medtr3g098230.1 | PPR containing plant-like protein | HC | chr3:... 250 3e-66
Medtr8g096030.1 | PPR containing plant-like protein | HC | chr8:... 249 7e-66
Medtr5g094220.1 | PPR containing plant-like protein | HC | chr5:... 246 5e-65
Medtr7g033400.1 | PPR containing protein | HC | chr7:12012362-12... 245 1e-64
Medtr8g479320.2 | PPR containing plant-like protein | HC | chr8:... 244 1e-64
Medtr8g479320.1 | PPR containing plant-like protein | HC | chr8:... 244 1e-64
Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC | ... 243 5e-64
Medtr5g043920.1 | PPR containing plant-like protein | HC | chr5:... 241 2e-63
Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC | ... 240 2e-63
Medtr5g022740.1 | PPR containing plant-like protein | HC | chr5:... 239 5e-63
Medtr2g028240.1 | PPR containing plant-like protein | HC | chr2:... 238 1e-62
Medtr2g026210.1 | PPR containing plant-like protein | HC | chr2:... 236 3e-62
Medtr3g006800.1 | pentatricopeptide (PPR) repeat protein | HC | ... 234 1e-61
Medtr3g088820.1 | PPR containing plant-like protein | HC | chr3:... 234 2e-61
Medtr3g037470.1 | TPR superfamily protein | HC | chr3:13772234-1... 231 1e-60
Medtr3g077200.1 | PPR containing plant-like protein | HC | chr3:... 230 2e-60
Medtr2g082550.1 | PPR containing plant-like protein, putative | ... 227 2e-59
Medtr3g408390.1 | PPR containing plant-like protein | HC | chr3:... 226 4e-59
Medtr8g065040.1 | PPR containing plant-like protein | HC | chr8:... 224 1e-58
Medtr3g088825.1 | PPR containing plant-like protein | HC | chr3:... 222 7e-58
Medtr7g111120.1 | PPR containing plant-like protein | HC | chr7:... 219 7e-57
Medtr3g088835.1 | PPR containing plant-like protein | HC | chr3:... 219 7e-57
Medtr7g084830.1 | PPR containing plant-like protein | HC | chr7:... 217 2e-56
Medtr4g119420.1 | pentatricopeptide (PPR) repeat protein | HC | ... 211 1e-54
Medtr5g031630.1 | PPR containing plant-like protein, putative | ... 211 2e-54
Medtr3g117620.1 | PPR containing plant-like protein | HC | chr3:... 198 1e-50
Medtr2g061460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 196 4e-50
Medtr6g016020.1 | PPR containing plant-like protein | HC | chr6:... 190 4e-48
Medtr4g006900.1 | PPR containing plant-like protein | HC | chr4:... 183 3e-46
Medtr6g460480.1 | organelle transcript processing protein, putat... 180 4e-45
Medtr4g087150.2 | PPR containing plant-like protein | HC | chr4:... 175 1e-43
Medtr2g087110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 168 1e-41
Medtr8g009490.1 | pentatricopeptide (PPR) repeat protein | HC | ... 167 4e-41
Medtr2g087200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 166 8e-41
Medtr2g021850.1 | PPR containing plant-like protein | HC | chr2:... 162 1e-39
Medtr5g068510.1 | PPR containing plant-like protein | HC | chr5:... 160 3e-39
Medtr1g040705.3 | PPR containing plant-like protein | HC | chr1:... 160 4e-39
Medtr1g040705.1 | PPR containing plant-like protein | HC | chr1:... 160 4e-39
Medtr2g099400.1 | PPR superfamily protein | HC | chr2:42618637-4... 159 5e-39
Medtr4g083630.1 | PPR containing plant-like protein | HC | chr4:... 159 6e-39
Medtr5g042450.1 | PPR containing plant-like protein | HC | chr5:... 159 8e-39
Medtr5g042450.2 | PPR containing plant-like protein | HC | chr5:... 159 8e-39
Medtr2g022040.1 | PPR containing plant-like protein | HC | chr2:... 159 9e-39
Medtr1g040705.2 | PPR containing plant-like protein | HC | chr1:... 158 1e-38
Medtr4g084680.1 | PPR containing plant-like protein | HC | chr4:... 157 2e-38
Medtr6g091880.1 | PPR containing plant-like protein | HC | chr6:... 132 7e-31
Medtr6g471100.1 | pentatricopeptide (PPR) repeat protein | LC | ... 125 1e-28
Medtr4g086270.1 | PPR containing plant-like protein | HC | chr4:... 121 1e-27
Medtr6g092170.1 | PPR containing plant-like protein | HC | chr6:... 120 4e-27
Medtr6g034150.1 | PPR containing plant-like protein | HC | chr6:... 119 7e-27
Medtr8g107050.2 | pentatricopeptide (PPR) repeat protein | LC | ... 118 1e-26
Medtr8g107050.1 | pentatricopeptide (PPR) repeat protein | LC | ... 118 1e-26
Medtr2g049740.1 | PPR containing plant-like protein | HC | chr2:... 116 4e-26
Medtr6g072030.1 | pentatricopeptide (PPR) repeat protein | HC | ... 115 9e-26
Medtr5g090210.1 | PPR containing plant-like protein | HC | chr5:... 115 1e-25
Medtr5g095130.1 | PPR containing plant-like protein | HC | chr5:... 113 4e-25
Medtr4g108650.1 | PPR containing plant-like protein | HC | chr4:... 112 6e-25
Medtr7g103600.1 | pentatricopeptide (PPR) repeat protein | HC | ... 112 8e-25
Medtr4g023520.1 | PPR repeat protein | LC | chr4:7956288-7959311... 111 2e-24
Medtr2g006810.1 | PPR containing plant-like protein | HC | chr2:... 110 5e-24
Medtr6g022260.1 | PPR containing plant-like protein | HC | chr6:... 109 6e-24
Medtr3g115270.1 | PPR containing plant-like protein | HC | chr3:... 108 1e-23
Medtr3g115270.2 | PPR containing plant-like protein | HC | chr3:... 108 1e-23
Medtr6g077540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 108 1e-23
Medtr7g451470.1 | PPR containing plant-like protein | LC | chr7:... 108 2e-23
Medtr6g065540.1 | pentatricopeptide (PPR) repeat protein | HC | ... 106 5e-23
Medtr6g079590.1 | pentatricopeptide (PPR) repeat protein | LC | ... 106 5e-23
Medtr5g031740.1 | PPR containing plant-like protein | HC | chr5:... 106 5e-23
Medtr4g084790.1 | PPR domain protein | HC | chr4:33048235-330493... 106 5e-23
Medtr3g037490.1 | PPR containing plant-like protein | HC | chr3:... 106 7e-23
Medtr4g108060.1 | PPR containing plant-like protein | HC | chr4:... 103 6e-22
Medtr4g108060.2 | PPR containing plant-like protein | HC | chr4:... 102 9e-22
Medtr3g053350.1 | PPR containing plant-like protein | HC | chr3:... 102 1e-21
Medtr3g053350.2 | PPR containing plant-like protein | HC | chr3:... 102 1e-21
Medtr7g076550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 101 2e-21
Medtr1g045880.1 | PPR containing plant-like protein | HC | chr1:... 100 2e-21
Medtr6g080200.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr6g080200.2 | pentatricopeptide (PPR) repeat protein | HC | ... 100 3e-21
Medtr0014s0250.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 3e-21
Medtr1g029490.1 | pentatricopeptide (PPR) repeat protein | LC | ... 100 3e-21
Medtr1g031720.1 | PPR containing plant-like protein | LC | chr1:... 100 4e-21
Medtr4g076540.1 | PPR containing plant-like protein | HC | chr4:... 100 4e-21
Medtr2g094420.1 | PPR containing plant-like protein | HC | chr2:... 100 4e-21
Medtr0014s0180.1 | pentatricopeptide (PPR) repeat protein | LC |... 100 5e-21
Medtr6g069300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 100 6e-21
Medtr5g090170.4 | PPR containing plant-like protein | HC | chr5:... 100 6e-21
Medtr5g090170.2 | PPR containing plant-like protein | HC | chr5:... 100 6e-21
Medtr5g090170.3 | PPR containing plant-like protein | HC | chr5:... 100 6e-21
Medtr5g090170.5 | PPR containing plant-like protein | HC | chr5:... 100 6e-21
Medtr5g090170.6 | PPR containing plant-like protein | HC | chr5:... 100 6e-21
Medtr7g067460.1 | TCP-1/cpn60 chaperonin family protein | HC | c... 100 6e-21
Medtr6g078160.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 7e-21
Medtr6g079310.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 7e-21
Medtr4g074390.1 | PPR containing plant-like protein | HC | chr4:... 99 8e-21
Medtr5g090170.1 | PPR containing plant-like protein | HC | chr5:... 99 9e-21
Medtr6g069180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 1e-20
Medtr6g069180.2 | pentatricopeptide (PPR) repeat protein | LC | ... 99 1e-20
Medtr1g050495.1 | pentatricopeptide (PPR) repeat protein | LC | ... 99 1e-20
Medtr4g068360.1 | PPR containing plant-like protein | HC | chr4:... 99 1e-20
Medtr1g112240.1 | PPR containing plant-like protein | HC | chr1:... 99 1e-20
Medtr4g075270.1 | PPR containing plant-like protein | HC | chr4:... 99 1e-20
Medtr6g079250.1 | pentatricopeptide (PPR) repeat protein | HC | ... 99 1e-20
Medtr1g068960.1 | PPR containing plant-like protein | HC | chr1:... 97 3e-20
Medtr8g071970.1 | PPR containing plant-like protein | HC | chr8:... 97 4e-20
Medtr6g069840.3 | pentatricopeptide (PPR) repeat protein | HC | ... 97 4e-20
Medtr6g069840.2 | pentatricopeptide (PPR) repeat protein | HC | ... 97 4e-20
Medtr0054s0140.1 | pentatricopeptide (PPR) repeat protein | LC |... 97 4e-20
Medtr6g069840.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 5e-20
Medtr6g065190.1 | PPR repeat protein | LC | chr6:24137605-241338... 97 5e-20
Medtr6g079240.1 | pentatricopeptide (PPR) repeat protein | HC | ... 97 5e-20
Medtr7g405940.1 | PPR containing plant-like protein | HC | chr7:... 97 5e-20
Medtr6g078210.1 | pentatricopeptide (PPR) repeat protein | LC | ... 97 6e-20
Medtr3g105900.1 | proton gradient regulation protein | HC | chr3... 96 8e-20
Medtr4g107210.1 | PPR containing plant-like protein | HC | chr4:... 96 8e-20
Medtr6g079440.1 | RNA processing factor 2, putative | HC | chr6:... 96 9e-20
Medtr7g091410.2 | PPR containing plant-like protein | HC | chr7:... 96 1e-19
Medtr7g091410.1 | PPR containing plant-like protein | HC | chr7:... 96 1e-19
Medtr1g033960.1 | PPR containing plant-like protein | HC | chr1:... 95 2e-19
Medtr8g064830.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 2e-19
Medtr6g080210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 95 2e-19
Medtr3g061000.1 | pentatricopeptide (PPR) repeat protein | LC | ... 95 2e-19
Medtr8g105170.1 | PPR containing plant-like protein | LC | chr8:... 94 3e-19
Medtr4g089005.1 | pentatricopeptide (PPR) repeat protein | HC | ... 94 3e-19
Medtr5g077220.1 | PPR containing plant-like protein | HC | chr5:... 94 5e-19
Medtr2g094423.1 | PPR containing plant-like protein | LC | chr2:... 93 5e-19
Medtr2g036560.1 | PPR containing plant-like protein | HC | chr2:... 93 8e-19
Medtr5g007250.1 | PPR containing plant-like protein | HC | chr5:... 92 9e-19
Medtr5g077930.1 | PPR containing plant-like protein | HC | chr5:... 92 1e-18
Medtr0237s0070.1 | pentatricopeptide (PPR) repeat protein | LC |... 92 1e-18
Medtr7g091470.1 | PPR containing plant-like protein | HC | chr7:... 92 1e-18
Medtr7g066990.2 | pentatricopeptide (PPR) repeat protein | HC | ... 92 1e-18
Medtr7g066990.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 1e-18
Medtr8g015530.1 | PPR repeat protein | LC | chr8:5078258-5077407... 92 1e-18
Medtr7g007400.1 | PPR containing plant-like protein | HC | chr7:... 92 1e-18
Medtr4g091600.1 | PPR containing plant-like protein | HC | chr4:... 92 1e-18
Medtr3g054110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 92 1e-18
Medtr7g091410.3 | PPR containing plant-like protein | HC | chr7:... 92 1e-18
Medtr7g091410.4 | PPR containing plant-like protein | HC | chr7:... 92 1e-18
Medtr6g079220.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr7g012890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 91 2e-18
Medtr0014s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 91 3e-18
Medtr6g079210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 91 3e-18
Medtr6g092220.1 | PPR containing plant-like protein | HC | chr6:... 90 5e-18
Medtr6g061120.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 5e-18
Medtr1g095880.1 | PPR containing plant-like protein | HC | chr1:... 90 6e-18
Medtr2g035630.1 | pentatricopeptide (PPR) repeat protein | HC | ... 90 7e-18
Medtr3g088950.1 | pentatricopeptide (PPR) repeat protein, putati... 89 8e-18
Medtr2g036080.1 | PPR containing plant-like protein | HC | chr2:... 89 1e-17
Medtr6g079380.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 1e-17
Medtr7g024140.1 | PPR containing plant-like protein, putative | ... 89 1e-17
Medtr1g045850.1 | pentatricopeptide (PPR) repeat protein | LC | ... 89 1e-17
Medtr6g079180.1 | pentatricopeptide (PPR) repeat protein | HC | ... 89 1e-17
Medtr6g068790.1 | pentatricopeptide (PPR) repeat protein | LC | ... 88 2e-17
Medtr1g035250.1 | PPR containing plant-like protein | HC | chr1:... 88 2e-17
Medtr0308s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 88 2e-17
Medtr3g100600.1 | PPR containing plant-like protein | HC | chr3:... 88 2e-17
Medtr2g041700.1 | PPR containing plant-like protein | HC | chr2:... 88 3e-17
Medtr6g081920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-17
Medtr1g080110.1 | pentatricopeptide (PPR) repeat protein | HC | ... 87 4e-17
Medtr6g079830.1 | pentatricopeptide (PPR) repeat protein | LC | ... 87 4e-17
Medtr5g045490.1 | PPR containing plant-like protein | HC | chr5:... 86 7e-17
Medtr6g079960.1 | pentatricopeptide (PPR) repeat protein, putati... 86 9e-17
Medtr0110s0060.1 | pentatricopeptide (PPR) repeat protein | HC |... 86 1e-16
Medtr6g046300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 86 1e-16
Medtr7g060720.1 | PPR containing plant-like protein, putative | ... 86 1e-16
Medtr4g040410.1 | PPR containing plant-like protein | HC | chr4:... 86 1e-16
Medtr6g078190.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 2e-16
Medtr6g065560.1 | PPR containing plant-like protein | LC | chr6:... 85 2e-16
Medtr8g054410.2 | PPR containing plant-like protein | HC | chr8:... 85 2e-16
Medtr8g054410.1 | PPR containing plant-like protein | HC | chr8:... 85 2e-16
Medtr6g079460.1 | pentatricopeptide (PPR) repeat protein | LC | ... 85 2e-16
Medtr0572s0010.1 | pentatricopeptide (PPR) repeat protein | LC |... 85 2e-16
Medtr3g448620.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 2e-16
Medtr6g079920.1 | pentatricopeptide (PPR) repeat protein | LC | ... 84 3e-16
Medtr3g091460.1 | PPR containing plant-like protein | HC | chr3:... 84 3e-16
Medtr5g024320.1 | PPR containing plant-like protein | HC | chr5:... 84 3e-16
Medtr6g079270.1 | pentatricopeptide (PPR) repeat protein | HC | ... 84 4e-16
Medtr5g089850.1 | PPR containing protein | HC | chr5:39081850-39... 84 4e-16
Medtr7g011500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 5e-16
Medtr0019s0210.3 | pentatricopeptide (PPR) repeat protein | LC |... 83 5e-16
Medtr0019s0210.2 | pentatricopeptide (PPR) repeat protein | LC |... 83 5e-16
Medtr0019s0210.1 | pentatricopeptide (PPR) repeat protein | LC |... 83 5e-16
Medtr1g048080.1 | pentatricopeptide (PPR) repeat protein | HC | ... 83 6e-16
Medtr6g077800.1 | pentatricopeptide (PPR) repeat protein | LC | ... 83 6e-16
Medtr3g114700.1 | PPR containing plant-like protein | HC | chr3:... 83 6e-16
Medtr5g025200.1 | PPR repeat protein | HC | chr5:10223562-102249... 83 6e-16
Medtr3g033040.2 | PPR containing plant-like protein | HC | chr3:... 83 8e-16
Medtr3g033040.1 | PPR containing plant-like protein | HC | chr3:... 83 8e-16
Medtr7g017570.1 | PPR containing plant protein | HC | chr7:56046... 82 1e-15
Medtr2g023220.1 | PPR containing plant-like protein | HC | chr2:... 82 1e-15
Medtr6g079890.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr4g107180.1 | pentatricopeptide (PPR) repeat protein | LC | ... 81 2e-15
Medtr6g478210.1 | pentatricopeptide (PPR) repeat protein | HC | ... 81 2e-15
Medtr2g030540.1 | PPR containing plant-like protein | HC | chr2:... 81 2e-15
Medtr2g069700.1 | PPR containing plant-like protein | LC | chr2:... 81 3e-15
Medtr0014s0260.1 | pentatricopeptide (PPR) repeat protein | LC |... 81 3e-15
Medtr3g088810.1 | PPR containing plant-like protein | LC | chr3:... 81 3e-15
Medtr3g034990.2 | pentatricopeptide (PPR) repeat protein | LC | ... 80 4e-15
Medtr3g034990.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 4e-15
Medtr6g068820.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 4e-15
Medtr3g091500.1 | pentatricopeptide (PPR) repeat protein | LC | ... 80 5e-15
Medtr5g039750.1 | PPR containing plant-like protein | LC | chr5:... 80 5e-15
Medtr7g025610.1 | PPR containing plant-like protein, putative | ... 80 5e-15
Medtr8g070060.1 | pentatricopeptide (PPR) repeat protein | HC | ... 80 6e-15
Medtr2g037740.1 | PPR containing plant-like protein | HC | chr2:... 80 7e-15
Medtr3g045420.1 | PPR containing plant-like protein | HC | chr3:... 79 8e-15
Medtr7g017530.1 | PPR containing plant protein | HC | chr7:55963... 79 8e-15
Medtr3g061020.1 | pentatricopeptide (PPR) repeat protein | HC | ... 79 9e-15
Medtr2g103520.1 | PPR containing plant-like protein | HC | chr2:... 79 1e-14
Medtr8g098755.1 | PPR containing plant-like protein | HC | chr8:... 78 2e-14
Medtr1g064390.1 | pentatricopeptide (PPR) repeat protein | LC | ... 78 3e-14
Medtr8g039270.1 | PPR containing plant-like protein | HC | chr8:... 77 3e-14
Medtr0429s0020.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 4e-14
Medtr1g091880.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 4e-14
Medtr3g023180.1 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr3g023180.2 | PPR containing plant-like protein | HC | chr3:... 77 4e-14
Medtr8g091670.1 | PPR containing plant-like protein | HC | chr8:... 77 5e-14
Medtr2g102210.1 | PPR containing plant-like protein | HC | chr2:... 77 5e-14
Medtr2g437460.1 | pentatricopeptide (PPR) repeat protein | HC | ... 77 5e-14
Medtr6g445320.1 | pentatricopeptide (PPR) repeat protein | LC | ... 77 6e-14
Medtr7g056613.1 | PPR containing plant-like protein | HC | chr7:... 77 6e-14
Medtr0051s0090.1 | pentatricopeptide (PPR) repeat protein | LC |... 77 6e-14
Medtr0177s0060.1 | pentatricopeptide (PPR) repeat protein | LC |... 76 6e-14
Medtr1g114300.1 | PPR containing plant-like protein | HC | chr1:... 76 8e-14
Medtr7g090340.1 | PPR containing plant-like protein | HC | chr7:... 76 8e-14
Medtr5g029690.1 | PPR containing plant-like protein | HC | chr5:... 76 9e-14
Medtr3g094280.1 | pentatricopeptide (PPR) repeat protein | LC | ... 75 2e-13
Medtr2g035450.1 | PPR containing plant-like protein | HC | chr2:... 75 2e-13
Medtr8g083130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 6e-13
Medtr5g006640.1 | PPR containing plant-like protein | HC | chr5:... 73 6e-13
Medtr3g007795.1 | PPR containing plant-like protein | HC | chr3:... 73 7e-13
Medtr2g026635.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 8e-13
Medtr4g133740.1 | pentatricopeptide (PPR) repeat protein | HC | ... 73 8e-13
Medtr6g082970.1 | pentatricopeptide (PPR) repeat protein | LC | ... 72 1e-12
Medtr4g062480.2 | PPR containing plant-like protein | HC | chr4:... 72 1e-12
Medtr4g062480.3 | PPR containing plant-like protein | HC | chr4:... 72 1e-12
Medtr4g062480.1 | PPR containing plant-like protein | HC | chr4:... 72 1e-12
Medtr1g010020.1 | PPR containing plant-like protein | HC | chr1:... 72 2e-12
Medtr1g008310.1 | PPR containing plant-like protein | HC | chr1:... 72 2e-12
Medtr6g445300.1 | pentatricopeptide (PPR) repeat protein | HC | ... 71 3e-12
Medtr1g010020.2 | PPR containing plant-like protein | HC | chr1:... 71 3e-12
Medtr0573s0020.1 | pentatricopeptide (PPR) repeat protein | HC |... 70 4e-12
Medtr6g478130.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 5e-12
Medtr5g039700.1 | PPR containing plant-like protein | HC | chr5:... 70 7e-12
Medtr6g079290.1 | pentatricopeptide (PPR) repeat protein | HC | ... 70 7e-12
Medtr2g069680.1 | PPR containing plant-like protein | HC | chr2:... 69 1e-11
Medtr8g071300.1 | PPR containing plant-like protein | HC | chr8:... 69 1e-11
Medtr0654s0010.1 | pentatricopeptide (PPR) repeat protein | HC |... 69 1e-11
Medtr6g069170.1 | pentatricopeptide (PPR) repeat protein | HC | ... 69 1e-11
Medtr2g100200.2 | PPR containing plant-like protein | HC | chr2:... 69 2e-11
Medtr2g100200.1 | PPR containing plant-like protein | HC | chr2:... 69 2e-11
Medtr7g095380.1 | PPR repeat protein | HC | chr7:38183678-381831... 68 2e-11
Medtr7g095300.1 | pentatricopeptide (PPR) repeat protein | LC | ... 68 2e-11
Medtr7g058380.1 | PPR repeat protein | HC | chr7:21009807-210090... 68 2e-11
Medtr4g123860.1 | PPR containing plant-like protein | HC | chr4:... 68 3e-11
Medtr8g103480.2 | PPR containing plant-like protein | HC | chr8:... 68 3e-11
Medtr8g103480.1 | PPR containing plant-like protein | HC | chr8:... 68 3e-11
Medtr1g090120.1 | PPR containing plant-like protein | HC | chr1:... 68 3e-11
Medtr2g069680.2 | PPR containing plant-like protein | HC | chr2:... 68 3e-11
Medtr8g080940.1 | PPR containing plant-like protein | HC | chr8:... 67 4e-11
Medtr2g018550.1 | pentatricopeptide (PPR) repeat protein | HC | ... 67 4e-11
>Medtr8g066250.1 | PPR containing plant-like protein | HC |
chr8:27517637-27514893 | 20130731
Length = 728
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/536 (78%), Positives = 473/536 (88%), Gaps = 1/536 (0%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HARK+FDK+P+PNTATWNAMF GY HRD VVLF E+NR A P N FT P++++SC
Sbjct: 62 HARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMP-NCFTFPMIIKSC 120
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
K VREGE+VHC A K GFK NSF+ T+LI+MYS KG V DAYKVFGEM ERNVVVWT
Sbjct: 121 GKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVFGEMHERNVVVWT 180
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
A+I+ YI CGDV SGRRL DLAPERDVVMWS++ISGYIES +M +ARELFDKMPNRD MS
Sbjct: 181 AIINGYILCGDVVSGRRLFDLAPERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMS 240
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN +LNGYA +G+V FEKVF+EMPERNV+SWN LIGGY +NG FS+ LE+FK+MLVEG
Sbjct: 241 WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGH 300
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V+PNDFTLVAVL ACSRLGALDMGKWVHVYAESIGYKGN+FVGN LIDMYAKCGVIE+AV
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAV 360
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VFNCLDR+DIISWNT+INGLA+HG+ DAL +FD+MK+ E+PDGVTFVGILSACTHMG
Sbjct: 361 VVFNCLDRKDIISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMG 420
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
LV+DGFLYF+SMVDHYSI+PQIEHYGCM DLLGRAGLLDQA++F+RKMP+EPDAVIW +L
Sbjct: 421 LVKDGFLYFKSMVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAAL 480
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
LGACR +KNVEIAELA Q LIELEP NPANFVM+SNIYKDLGR +DVARLKIAMRDTGFR
Sbjct: 481 LGACRLYKNVEIAELALQRLIELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFR 540
Query: 483 KLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQG 538
KLPGCSVIECNDSVVEFYSLDERH ETESIYR L+GLTMLLR HGYVPNL DVA G
Sbjct: 541 KLPGCSVIECNDSVVEFYSLDERHSETESIYRVLKGLTMLLRSHGYVPNLSDVAHG 596
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 123/300 (41%), Gaps = 76/300 (25%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTES------------HRDVVV----------- 37
M AR++FDKMP +T +WNAM NGY++ R+V
Sbjct: 223 MAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNGLIGGYVKN 282
Query: 38 -LFAEMNRAAAAPL-------NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFL 89
LF+E + L N FTL V+ +CS+ GA+ G+ VH A G+K N F+
Sbjct: 283 GLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFV 342
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDV 149
LI+MY+ G + +A VF +C D +D+
Sbjct: 343 GNVLIDMYAKCGVIENAVVVF-------------------NCLD------------RKDI 371
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEE 205
+ W+ +I+G G A +FD+M + D +++ +L+ + G V F+
Sbjct: 372 ISWNTIINGLAIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKS 431
Query: 206 MPER-----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
M + + + ++ R G AL ++M +E D V + A LL RL
Sbjct: 432 MVDHYSIVPQIEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAV-----IWAALLGACRL 486
>Medtr4g113830.1 | organelle transcript processing protein, putative
| HC | chr4:46849211-46846995 | 20130731
Length = 738
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 228/562 (40%), Positives = 324/562 (57%), Gaps = 43/562 (7%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
N WN++ GYSL+ S + LF+ M P +H T P + +SC+KA A EG+Q+
Sbjct: 95 NVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSH-TFPFLFKSCTKAKATHEGKQL 153
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H A K +N + T++I MY++ G + A VF + R+ V +TA+I+ Y+S G +
Sbjct: 154 HAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCL 213
Query: 135 GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNRDVM------- 181
RRL D P +DVV W+ +ISGY++SG A F +M PN+ M
Sbjct: 214 DDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSAC 273
Query: 182 -------------SW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
SW N L++ Y G+ ++F+ + E++V SWN
Sbjct: 274 GHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWN 333
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE- 274
+IGGY+ + +AL F+ ML +V PND T + +L AC+ LGALD+GKWVH Y +
Sbjct: 334 TMIGGYSYLSLYEEALALFEVML-RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDK 392
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
++ N + +LIDMYAKCG IE+A VF + R++ SWN M++G AMHG+ AL+
Sbjct: 393 NLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALA 452
Query: 335 LFDQMKNS-REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
LF +M N +PD +TFVG+LSACT GLV G YF+SM+ Y I P+++HYGCM DL
Sbjct: 453 LFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDL 512
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
L RA ++A ++ M MEPD IW SLL AC+ H VE E + L +LEP+N F
Sbjct: 513 LARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAF 572
Query: 454 VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIY 513
V+LSNIY GRW DVAR++ + D G +K+PGC+ IE + V EF D+ HPE +IY
Sbjct: 573 VLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIY 632
Query: 514 RALRGLTMLLRLHGYVPNLVDV 535
+ L + LL +G+VPN +V
Sbjct: 633 KMLNEVDKLLEENGFVPNTSEV 654
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 168/373 (45%), Gaps = 43/373 (11%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FD++P + +WNAM +GY + + +V F EM A P N T+ +V+ +C
Sbjct: 216 ARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLP-NKSTMVVVLSACG 274
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+ + GF N L ALI+MY G A ++F + E++V+ W
Sbjct: 275 HTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNT 334
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL-------FDK-M 175
MI Y L ++ +V + G + + + A +L DK +
Sbjct: 335 MIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNL 394
Query: 176 PNRDVMS-WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
N S W +L++ YA G + + E+VF M RN+ SWN ++ G+A +G AL F
Sbjct: 395 RNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALF 454
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M+ +G P+D T V VL AC++ G +D+G H Y S +I Y
Sbjct: 455 SEMVNKGLFRPDDITFVGVLSACTQAGLVDLG---HQYFRS------------MIQDYG- 498
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
I + + C MI+ LA +A L MKN +PDG + +
Sbjct: 499 ---ISPKLQHYGC-----------MIDLLARAEKFEEAEIL---MKNMEMEPDGAIWGSL 541
Query: 355 LSACTHMGLVRDG 367
LSAC G V G
Sbjct: 542 LSACKAHGRVEFG 554
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 133/317 (41%), Gaps = 49/317 (15%)
Query: 193 SGDVGSFEKVFEEMPER---NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
SGD+ +FEE + NV+ WN LI GY+ + +L F +ML G V PN T
Sbjct: 75 SGDLSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYG-VQPNSHT 133
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN--- 306
+ +C++ A GK +H +A + N V ++I MYA G ++ A VF+
Sbjct: 134 FPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSS 193
Query: 307 ------------------CLDR----------RDIISWNTMINGLAMHGNTADALSLFDQ 338
CLD +D++SWN MI+G G +A+ F +
Sbjct: 194 LRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYE 253
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFL--YFQSMVDHYSIIPQIEHYGCMADLLGR 396
M+ + P+ T V +LSAC H R G L + S V ++ + D+ +
Sbjct: 254 MQEANVLPNKSTMVVVLSACGH---TRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCK 310
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVML 456
G D A + E D + W +++G E A F+ ++ K P + L
Sbjct: 311 CGETDIARELFDGIE-EKDVISWNTMIGGYSYLSLYEEALALFEVMLRSNVK-PNDVTFL 368
Query: 457 SNIYK-------DLGRW 466
++ DLG+W
Sbjct: 369 GILHACACLGALDLGKW 385
>Medtr8g106950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45164389-45168068 | 20130731
Length = 766
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 202/532 (37%), Positives = 304/532 (57%), Gaps = 22/532 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD MPE N+ +WN + Y + +LF + ++ +C
Sbjct: 161 AREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLFESKS----------DWDLISWNCL 210
Query: 64 KAGAVREGEQ------VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
G VR+ + + + WN+ +I Y+ G + A ++F E P R+
Sbjct: 211 MGGFVRKKKLGDARWLFDKMPVRDAISWNT-----MISGYAQGGGLSQARRLFDESPTRD 265
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
V WTAM+S Y+ G + + D PE++ V ++ +I+GY+++ M ARELF+ MP
Sbjct: 266 VFTWTAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPC 325
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
R++ SWNT++ GY GD+ K F+ MP+R+ SW +I GYA++G + +AL F ++
Sbjct: 326 RNISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEI 385
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+G+ + N T L C+ + AL++GK +H A +GY FVGNAL+ MY KCG
Sbjct: 386 KQDGESL-NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGS 444
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
I+ A D F ++ +D++SWNTM+ G A HG AL++F+ MK + +PD +T VG+LSA
Sbjct: 445 IDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSA 504
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C+H GL+ G YF SM Y +IP +HY CM DLLGRAG L++A +R MP +P A
Sbjct: 505 CSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAA 564
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
W +LLGA R H N E+ E A + + ++EP+N +V+LSN+Y GRW D +++ MR
Sbjct: 565 SWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMR 624
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
D G +K+PG S +E + + F D HPE E IY L L + +R GYV
Sbjct: 625 DIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYV 676
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 164/349 (46%), Gaps = 36/349 (10%)
Query: 83 FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD 142
KWN + T + G A VF MP R+ V + AMIS Y+ R L D
Sbjct: 50 LKWNKAISTHM-----RNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFD 104
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
PERD+ W+++++GY+ + + AR LFD MP +DV+SWN+LL+GYA +G V +V
Sbjct: 105 QMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREV 164
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVA---VLLACSR 259
F+ MPE+N SWN L+ Y NGR +A F+ +D+ L++ ++ R
Sbjct: 165 FDNMPEKNSISWNGLLAAYVHNGRIEEACLLFES--------KSDWDLISWNCLMGGFVR 216
Query: 260 LGALDMGKWVH---VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
L +W+ ++I + N +I YA+ G + A +F+ RD+ +W
Sbjct: 217 KKKLGDARWLFDKMPVRDAISW-------NTMISGYAQGGGLSQARRLFDESPTRDVFTW 269
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
M++G +G +A + FD+M E G + M + R+ F+SM
Sbjct: 270 TAMVSGYVQNGMLDEAKTFFDEMPEKNEVSYNAMIAGYVQT-KKMDIARE---LFESMP- 324
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
I + M G+ G + QA F MP + D V W +++
Sbjct: 325 ----CRNISSWNTMITGYGQIGDIAQARKFFDMMP-QRDCVSWAAIIAG 368
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 111/250 (44%), Gaps = 50/250 (20%)
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
++ + D++ WN ++ + +G S VF MP R+ S+N +I GY RN +F+ A
Sbjct: 43 RVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNL 102
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F QM + ++F N ++ Y
Sbjct: 103 FDQMP----------------------------------------ERDLFSWNVMLTGYV 122
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+ + A +F+ + +D++SWN++++G A +G +A +FD M + + +++ G
Sbjct: 123 RNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMP----EKNSISWNG 178
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L+A H G + + L F+S D + +I + C+ R L A KMP+
Sbjct: 179 LLAAYVHNGRIEEACLLFESKSD-WDLIS----WNCLMGGFVRKKKLGDARWLFDKMPVR 233
Query: 414 PDAVIWTSLL 423
DA+ W +++
Sbjct: 234 -DAISWNTMI 242
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 117/281 (41%), Gaps = 45/281 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARK FD MP+ + +W A+ GY+ + + + + +F E+ + + LN T +
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGES-LNRATFGCALS 402
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A+ G+Q+H A K G+ F+ AL+ MY GS+ +A F + E++VV
Sbjct: 403 TCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVS 462
Query: 121 WTAMISAYISCG----------------------------DVGSGRRLLDLAPERDVVM- 151
W M++ Y G S LLD E M
Sbjct: 463 WNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMT 522
Query: 152 -----------WSIVISGYIESGDMVSARELFDKMPNR-DVMSWNTLLNGYANSGDVGSF 199
++ +I +G + A++L MP + SW LL G+
Sbjct: 523 KDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELG 582
Query: 200 EKVFE---EMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
EK E +M +N + +L YA +GR+ DA + +M
Sbjct: 583 EKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKM 623
>Medtr7g093900.2 | PPR containing plant-like protein | HC |
chr7:37366165-37359102 | 20130731
Length = 663
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/573 (35%), Positives = 329/573 (57%), Gaps = 44/573 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +F+++ +PNT WN M GY F M + ++ + ++
Sbjct: 94 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVE-MDSRSFVFALK 152
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + V EGE V+CV K GF + LI Y+ +G + +A +VF E +++VV
Sbjct: 153 ACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVT 212
Query: 121 WTAMISAYIS--------------------------------CGDVGS---GRRLLDLAP 145
WT MI Y + C D+G+ G+R+ +
Sbjct: 213 WTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE 272
Query: 146 ERD----VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
E++ + + + ++ Y++ +V ARELFD+M +DV SW +++NGYA GD+ S +
Sbjct: 273 EKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARR 332
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
F++ P +N W+ +I GY++N + ++L+ F +M+ G VVP + TLV+VL AC +L
Sbjct: 333 FFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERG-VVPIEHTLVSVLSACGQLT 391
Query: 262 ALDMGKWVHVYAESIG--YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
L++G W+H Y +G ++ + NA++DMYAKCG I++A +VF+ + R++ISWNTM
Sbjct: 392 CLNLGDWIHQYF-VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 450
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I G A +G A+++FDQM+N +P+ +TFV +L+AC+H GL+ +G YF +M Y
Sbjct: 451 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYG 510
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I P+ HY CM DLLGR GLL++A + MPM+P W +LL ACR H NVE+A L+
Sbjct: 511 IKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSA 570
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+L+ L+P++ +V+L+N + +W DV R++ M+D G +K+PG S+IE + VEF
Sbjct: 571 HNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEF 630
Query: 500 YSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
DE HP++E IY+ L + +L +L Y +L
Sbjct: 631 LVADESHPQSEEIYKVLEEILLLSKLEDYSYDL 663
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 125/252 (49%), Gaps = 9/252 (3%)
Query: 191 ANSGDVGSFEKVFEEMPERNVYSWNVLIGGY--ARNGRFSDALEAFK-QMLVEGDVVPND 247
A+SGD+ +F + + N + WN +I GY AR F+ + + Q+ VE D
Sbjct: 89 AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMD----S 144
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
+ V L AC + + G+ V+ +G+ + V N LI YA+ G++++A VF+
Sbjct: 145 RSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDE 204
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+D+++W TMI+G A H + +A+ +F+ M S +P+ VT + ++SAC+ MG + G
Sbjct: 205 SSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMG 264
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
+ V+ ++ + + + D+ + L A +M + D WTS++
Sbjct: 265 KRVHEK-VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYA 322
Query: 428 THKNVEIAELAF 439
++E A F
Sbjct: 323 KCGDLESARRFF 334
>Medtr7g011840.1 | PPR containing plant-like protein | HC |
chr7:3275571-3278623 | 20130731
Length = 605
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/537 (37%), Positives = 317/537 (59%), Gaps = 5/537 (0%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIV 58
+ A VF+++P+PN +N + YSL+ + + + F + + + ++FT P +
Sbjct: 70 LSSAVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFL 129
Query: 59 VRSCSKAGA-VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ C+ + + + + VH K GF W+ F+ +LI+ Y G V A KVF M ER+
Sbjct: 130 LKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERD 189
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
VV W +M+ + GD+ ++ D PERD V W+ ++ G+ ++G+M A +LF++M
Sbjct: 190 VVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKLFERMAE 249
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
RD++SW+T++ GY+ +GD+ +F+ P +N+ W +I GYA G+ +A+ +M
Sbjct: 250 RDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEM 309
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
G + + F +++L AC+ G L +GK +H ++ + V N+ IDMYAKCG
Sbjct: 310 EKSGLRLDDGF-FISILAACAESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGC 368
Query: 298 IESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
++ A VFN + +D++SWN+MI+G +HG+ ++ LF+ M +PD TF+G+L
Sbjct: 369 VDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLC 428
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
ACTH GLV +G YF SM Y I+PQIEHYGCM DLLGR G L +A VR MP EP+A
Sbjct: 429 ACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNA 488
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
+I +LLGACR H +V++A ++L +L P +P NF +LSNIY G W +VA+++ M
Sbjct: 489 IILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQM 548
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLV 533
D G +K G S IE + V EF D HP++ IY + L LR GYVP L+
Sbjct: 549 NDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKSGDIYNMIDRLVHDLRQVGYVPRLL 605
>Medtr7g093900.1 | PPR containing plant-like protein | HC |
chr7:37365900-37360699 | 20130731
Length = 854
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/555 (35%), Positives = 320/555 (57%), Gaps = 44/555 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +F+++ +PNT WN M GY F M + ++ + ++
Sbjct: 44 LHYAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRV-EMDSRSFVFALK 102
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + V EGE V+CV K GF + LI Y+ +G + +A +VF E +++VV
Sbjct: 103 ACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVT 162
Query: 121 WTAMISAYIS--------------------------------CGDVGS---GRRLLDLAP 145
WT MI Y + C D+G+ G+R+ +
Sbjct: 163 WTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVE 222
Query: 146 ERD----VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
E++ + + + ++ Y++ +V ARELFD+M +DV SW +++NGYA GD+ S +
Sbjct: 223 EKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARR 282
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
F++ P +N W+ +I GY++N + ++L+ F +M+ G VVP + TLV+VL AC +L
Sbjct: 283 FFDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERG-VVPIEHTLVSVLSACGQLT 341
Query: 262 ALDMGKWVHVYAESIG--YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
L++G W+H Y +G ++ + NA++DMYAKCG I++A +VF+ + R++ISWNTM
Sbjct: 342 CLNLGDWIHQYF-VVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTM 400
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I G A +G A+++FDQM+N +P+ +TFV +L+AC+H GL+ +G YF +M Y
Sbjct: 401 IAGYAANGRAKQAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYG 460
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I P+ HY CM DLLGR GLL++A + MPM+P W +LL ACR H NVE+A L+
Sbjct: 461 IKPERGHYACMVDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSA 520
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+L+ L+P++ +V+L+N + +W DV R++ M+D G +K+PG S+IE + VEF
Sbjct: 521 HNLLRLDPEDSGIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEF 580
Query: 500 YSLDERHPETESIYR 514
DE HP++E IY+
Sbjct: 581 LVADESHPQSEEIYK 595
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 3/251 (1%)
Query: 191 ANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTL 250
A+SGD+ +F + + N + WN +I GY +N R +F + + V + +
Sbjct: 39 AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGY-QNARKPIFAFSFFVYMFQLRVEMDSRSF 97
Query: 251 VAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
V L AC + + G+ V+ +G+ + V N LI YA+ G++++A VF+
Sbjct: 98 VFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSD 157
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
+D+++W TMI+G A H + +A+ +F+ M S +P+ VT + ++SAC+ MG + G
Sbjct: 158 KDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRV 217
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
+ V+ ++ + + + D+ + L A +M + D WTS++
Sbjct: 218 HEK-VEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATK-DVYSWTSMVNGYAKCG 275
Query: 431 NVEIAELAFQH 441
++E A F
Sbjct: 276 DLESARRFFDQ 286
>Medtr8g106910.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45147837-45154874 | 20130731
Length = 787
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/557 (36%), Positives = 300/557 (53%), Gaps = 41/557 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD MP+ + +WN M +GY + + ++F M + N L + V++
Sbjct: 98 ARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGL-LAVYVQN-- 154
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G + E ++ + W L+ Y + +GDA ++F MP RN + W
Sbjct: 155 --GRLEEARRLF----ESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNT 208
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWS------------------------------ 153
MIS Y GD+ RRL + +P RDV W+
Sbjct: 209 MISGYARDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAY 268
Query: 154 -IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
++I+GY++ M ARELF+ MP R+V SWNT+++GY +GD+ ++F+ M +R+
Sbjct: 269 NVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCV 328
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
SW +I GYA+ G + + +M +G + N T L C+ + AL +GK VH
Sbjct: 329 SWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSL-NRSTFCCALSTCAGMAALVLGKQVHGQ 387
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
A GY VGNAL++MY KCG I A DVF + +DIISWNTM+ G A HG A
Sbjct: 388 AVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLAGYARHGFGRQA 447
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
L +FD MK + +PD +T VG+L AC+H GL G YF SM Y I P +HY CM D
Sbjct: 448 LLVFDSMKTAGFKPDEITMVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMID 507
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPAN 452
LLGRAGLL++A + +R MP EPDA W +LLGA R H N E+ E A + + +EP N
Sbjct: 508 LLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGM 567
Query: 453 FVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
+V+LSN+Y LG+W DV +L++ MR G +K+PG S +E + + +F D HPE + I
Sbjct: 568 YVLLSNLYATLGKWVDVGKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRI 627
Query: 513 YRALRGLTMLLRLHGYV 529
Y L + + ++ G+V
Sbjct: 628 YAYLEEIDLKMKHEGHV 644
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 155/326 (47%), Gaps = 46/326 (14%)
Query: 70 EGEQVH--CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
G+ +H C ++ CT I + G A +VF MP +N+ W M++
Sbjct: 29 RGKHLHNFCFPVQKARDTYIVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTG 88
Query: 128 YISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD-------- 179
Y+ + R L DL P++D V W++++SGY+ SG + A+ +FD MP +D
Sbjct: 89 YVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLL 148
Query: 180 -----------------------VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
++SWN L+ GY +G ++F+ MP RN SWN
Sbjct: 149 AVYVQNGRLEEARRLFESKVDWELISWNCLMGGYVKRKMLGDARRLFDHMPVRNAISWNT 208
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
+I GYAR+G D L+A + L E V + FT A++ A + G LD + V+ E
Sbjct: 209 MISGYARDG---DLLQARR--LFEESPVRDVFTWTAMVFAYVQSGMLDEAR--RVFDEMP 261
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G + + N +I Y + ++ A ++F + R++ SWNT+I+G +G+ A A LF
Sbjct: 262 GKREMAY--NVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELF 319
Query: 337 DQMKNSREQPDGVTFVGILSACTHMG 362
D M Q D V++ I++ G
Sbjct: 320 DMM----TQRDCVSWAAIIAGYAQTG 341
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 35/316 (11%)
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
+V T IS ++ G R+ D P +++ W+++++GY+++ +V AR LFD MP
Sbjct: 48 IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQ 107
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
+D +SWN +L+GY SG V + VF+ MP ++ SWN L+ Y +NGR +A F+
Sbjct: 108 KDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESK 167
Query: 238 ----LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
L+ + + + +L RL + H+ N N +I YA
Sbjct: 168 VDWELISWNCLMGGYVKRKMLGDARRL-------FDHMPVR------NAISWNTMISGYA 214
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+ G + A +F RD+ +W M+ G +A +FD+M RE V G
Sbjct: 215 RDGDLLQARRLFEESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMAYNVMIAG 274
Query: 354 ILSACTHMGLVRDGFLYFQSM----VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
+ M + R+ F++M V ++ I I YG D+ L D
Sbjct: 275 YVQY-KKMDMARE---LFEAMPCRNVGSWNTI--ISGYGQNGDIAQARELFD-------- 320
Query: 410 MPMEPDAVIWTSLLGA 425
M + D V W +++
Sbjct: 321 MMTQRDCVSWAAIIAG 336
>Medtr7g105440.1 | PPR containing plant-like protein | HC |
chr7:42760641-42762768 | 20130731
Length = 589
Score = 384 bits (986), Expect = e-106, Method: Compositional matrix adjust.
Identities = 186/476 (39%), Positives = 302/476 (63%), Gaps = 5/476 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ VF+++ P+T WN + + D + F M A P + +T P V++
Sbjct: 65 LSYSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVP-DSYTYPSVIK 123
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS V G+ VH + G + F+ T L++MY G +GDA KVF E+ +RNVV
Sbjct: 124 ACSGTCKVLVGKSVHGSVFRCGLDQDLFVGTTLVDMYGKCGEIGDARKVFDELSDRNVVS 183
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WTAM+ Y++ GDV +++ D P R+V W+ +I G+++ GD+ SAR +FD MP ++V
Sbjct: 184 WTAMVVGYVTAGDVVEAKKVFDEMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNV 243
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+S+ T+++GYA +GD+ S +FE+ E++V +W+ LI GY +NG ++AL+ F +M
Sbjct: 244 VSFTTMIDGYAKAGDMESSRFLFEQAAEKDVVAWSALISGYVQNGEANEALKVFLEM-ES 302
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE--SIGYKGNMFVGNALIDMYAKCGVI 298
V+P++F LV+++ A S+LG L + + V Y + SI + + +V +AL+DM AKCG +
Sbjct: 303 MKVIPDEFVLVSLMSAASQLGDLKLAQRVDSYVDNSSIDLQQD-YVISALVDMNAKCGNM 361
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E A+ +F + +RD++S+ +MI+G ++HG+ DA++LF++M PD F +L+AC
Sbjct: 362 ERALKLFREMPKRDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTAC 421
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV G+ YF SM ++Y I P +H+ CM DLLGR+G L A ++ M +EP+A
Sbjct: 422 SHSGLVDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGA 481
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
W +L+GAC+ H + E+ E+ L ELEP+N AN+V+LSNIY GRW+DV+ ++I
Sbjct: 482 WGALIGACKLHGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVRI 537
>Medtr7g105540.1 | PPR containing plant-like protein | HC |
chr7:42802997-42805935 | 20130731
Length = 596
Score = 377 bits (969), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/474 (38%), Positives = 296/474 (62%), Gaps = 5/474 (1%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
++ VF+++ P+T WN + + D + F M A P + +T P V+++C
Sbjct: 67 YSTAVFNRVLNPSTFLWNTFIRTHCQSSFFSDTISAFIRMKAEGAVP-DSYTYPSVIKAC 125
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S V G+ VH + G + F+ T LI+MY G + DA KVF E+ ERNVV WT
Sbjct: 126 SGTCKVLVGKSVHGSVFRCGLDQDLFMGTTLIDMYGKCGQISDARKVFNELTERNVVSWT 185
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
AM+ Y++ GDV +++ D P R+V W+ +I G+++ GD+ SAR +FD MP ++V+S
Sbjct: 186 AMVVGYVTAGDVVKAKKVFDGMPLRNVASWNAMIRGFVKVGDLSSARGVFDSMPEKNVVS 245
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+ T+++GYA +GD+ S +FE+ E++V +W+ LI GY +NG ++AL+ F +M +
Sbjct: 246 FTTMVDGYAKAGDMESSRFLFEQAAEKDVVTWSALISGYVQNGEANEALKVFLEM-ESMN 304
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYA--ESIGYKGNMFVGNALIDMYAKCGVIES 300
V+P++F LV ++ A S+LG L + + V Y SI + + + +AL+DM AKCG +E
Sbjct: 305 VIPDEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDLQKDHVI-SALVDMNAKCGNMER 363
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A+ +F + RD++S+ +MI+G ++HG+ DA++LF++M PD F +L+AC+H
Sbjct: 364 ALKLFQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVPDEAAFTIVLTACSH 423
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
GL+ G+ YF SM ++Y I P +H+ CM DLLGR+G L A ++ M +EP+A W
Sbjct: 424 SGLIDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNAGAWG 483
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+L+GAC+ + E+ E+ L ELEP+N AN+V+LSNIY GRW+DV+ ++I
Sbjct: 484 ALIGACKLQGDTELGEIVANRLFELEPQNAANYVLLSNIYAAAGRWKDVSLVRI 537
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 136/343 (39%), Gaps = 89/343 (25%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR VFD MPE N ++ M +GY+ LF +
Sbjct: 228 LSSARGVFDSMPEKNVVSFTTMVDGYAKAGDMESSRFLFEQ------------------- 268
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV- 119
A K W +ALI Y G +A KVF EM NV+
Sbjct: 269 ----------------AAEKDVVTW-----SALISGYVQNGEANEALKVFLEMESMNVIP 307
Query: 120 ---VWTAMISAYISCGDVGSGRRL--------LDLAPERDVVMWSIVISGYIESGDMVSA 168
V ++SA GD+ +R+ +DL ++D V+ S ++ + G+M A
Sbjct: 308 DEFVLVGLMSAASQLGDLKLAQRVDSYVGNNSIDL--QKDHVI-SALVDMNAKCGNMERA 364
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+LF +MP RD++S+ + +I G++ +G
Sbjct: 365 LKLFQEMPERDLVSYCS-------------------------------MIHGFSIHGHGE 393
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNA 287
DA+ F +ML+EG +VP++ VL ACS G +D G K+ + E+ G
Sbjct: 394 DAVNLFNRMLMEG-IVPDEAAFTIVLTACSHSGLIDKGWKYFNSMEENYGISPTPDHFAC 452
Query: 288 LIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNT 329
++D+ + G + A ++ + + +W +I + G+T
Sbjct: 453 MVDLLGRSGQLRDAYELIKSMHIEPNAGAWGALIGACKLQGDT 495
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A K+F +MPE + ++ +M +G+S+ D V LF M P + IV+
Sbjct: 361 MERALKLFQEMPERDLVSYCSMIHGFSIHGHGEDAVNLFNRMLMEGIVP-DEAAFTIVLT 419
Query: 61 SCSKAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNV 118
+CS +G + +G + + + G ++++ G + DAY++ M E N
Sbjct: 420 ACSHSGLIDKGWKYFNSMEENYGISPTPDHFACMVDLLGRSGQLRDAYELIKSMHIEPNA 479
Query: 119 VVWTAMISAYISCGDVGSGR----RLLDLAPE 146
W A+I A GD G RL +L P+
Sbjct: 480 GAWGALIGACKLQGDTELGEIVANRLFELEPQ 511
>Medtr4g098940.1 | PPR containing plant-like protein | HC |
chr4:40871758-40869320 | 20130731
Length = 575
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/490 (37%), Positives = 292/490 (59%), Gaps = 3/490 (0%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
FD + P+ N + Y + + + A + P NH+T P++++ C G
Sbjct: 76 FDHLHHPDAFLCNTIIRSYLRSSNPSAAFHFYYHRMIAKSVPPNHYTFPLILKLCVDHGC 135
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
EGE+ H K GF + F+ +LI MYS G + DA +F E ++V + MI
Sbjct: 136 KLEGEKGHARVVKFGFLSDLFVRNSLIRMYSVFGRIDDARLIFYESYVLDLVSYNTMIDG 195
Query: 128 YISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL 187
Y+ G + R+L D ERDV W+ +I+GY+ GD+ +A+ELF+ MPN+DV+SWN ++
Sbjct: 196 YVKNGGIRDARKLFDEMYERDVFSWNCMIAGYVSVGDLAAAKELFEAMPNKDVVSWNCMI 255
Query: 188 NGYANSGDVGSFEKVFEEMPE---RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
+G G+V + F +M RNV SWN L+ + R + + L F++M+ G+ +
Sbjct: 256 DGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGEAM 315
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN+ TLV+VL AC+ LG L++G WVH Y +S K ++ + L+ MYAKCG ++ A DV
Sbjct: 316 PNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLASDV 375
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F + + I+SWN+MI G +HGN AL +F +M+ + ++P+ TF+ +LSAC+H G+V
Sbjct: 376 FVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKPNEATFICVLSACSHAGMV 435
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+G+ YF M Y I P++EHYGCM DLL RAG + + + K+ ++ + +W +LL
Sbjct: 436 MEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWGALLS 495
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
CRTH ++E+AE + L+ELEP++ + +++LS++Y GRW DV R+++AM+ G +K
Sbjct: 496 GCRTHLDLELAENVAKRLVELEPQDISPYILLSDVYAAQGRWDDVERVRLAMKINGLQKE 555
Query: 485 PGCSVIECND 494
S++ D
Sbjct: 556 AASSLVHLED 565
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 141/369 (38%), Gaps = 88/369 (23%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +F + + ++N M +GY RD LF EM
Sbjct: 174 ARLIFYESYVLDLVSYNTMIDGYVKNGGIRDARKLFDEMYE------------------- 214
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ F WN +I Y + G + A ++F MP ++VV W
Sbjct: 215 ----------------RDVFSWN-----CMIAGYVSVGDLAAAKELFEAMPNKDVVSWNC 253
Query: 124 MISAYISCGDVGSGRRL---LDLAPERDVVMWSIVISGYIESGDMVSARELFDK------ 174
MI + G+V +D R+VV W+ +++ ++ + +F++
Sbjct: 254 MIDGCVRVGNVSLALEFFNQMDGVVVRNVVSWNSLLALHVRMKNYGECLRMFERMMESGE 313
Query: 175 -MPNR---------------------------------DVMSWNTLLNGYANSGDVGSFE 200
MPN DV+ LL YA G +
Sbjct: 314 AMPNEATLVSVLTACANLGKLNLGLWVHSYIKSNEIKLDVLLETCLLTMYAKCGAMDLAS 373
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VF EMP +++ SWN +I GY +G ALE F +M G PN+ T + VL ACS
Sbjct: 374 DVFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQ-KPNEATFICVLSACSHA 432
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCGVIESAVDVFNCLDRRDIIS-WN 317
G + G W + YK V + ++D+ A+ G ++++ ++ + + + W
Sbjct: 433 GMVMEGWWYFDLMRRV-YKIEPKVEHYGCMVDLLARAGFVKNSEELIEKVSVKGGSAMWG 491
Query: 318 TMINGLAMH 326
+++G H
Sbjct: 492 ALLSGCRTH 500
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 91/218 (41%), Gaps = 52/218 (23%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A VF +MP + +WN+M GY L + + +FAEM +A P N T V+
Sbjct: 369 MDLASDVFVEMPVKSIVSWNSMIMGYGLHGNGDKALEMFAEMEKAGQKP-NEATFICVLS 427
Query: 61 SCSKAGAVREG-----------------EQVHCVA---AKRGFKWNSFLCTALIEMYSAK 100
+CS AG V EG E C+ A+ GF NS LIE S K
Sbjct: 428 ACSHAGMVMEGWWYFDLMRRVYKIEPKVEHYGCMVDLLARAGFVKNS---EELIEKVSVK 484
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV----GSGRRLLDLAPERDVVMWSIVI 156
G G A +W A++S + D+ +RL++L P+ I
Sbjct: 485 G--GSA-------------MWGALLSGCRTHLDLELAENVAKRLVELEPQD--------I 521
Query: 157 SGYIESGDMVSARELFDKMPN-RDVMSWNTLLNGYANS 193
S YI D+ +A+ +D + R M N L A+S
Sbjct: 522 SPYILLSDVYAAQGRWDDVERVRLAMKINGLQKEAASS 559
>Medtr3g096420.1 | PPR containing plant-like protein | HC |
chr3:44072693-44069577 | 20130731
Length = 705
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 316/580 (54%), Gaps = 48/580 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +F MPE + +WNAM +G++ + + + +M+ + LN ++ +
Sbjct: 101 LDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMH-SEDFVLNEYSFGSALS 159
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ + G Q+H + AK + + ++ +AL++MYS V A + F +M RN+V
Sbjct: 160 ACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVS 219
Query: 121 WTAMISAYISCGDVGSGR----RLLDLAPE------------------------------ 146
W ++I+ Y G G R+++ E
Sbjct: 220 WNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVM 279
Query: 147 ------RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
D+V+ + ++ Y + + AR +FD+MP RDV+S ++++GYA + V +
Sbjct: 280 KHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAAR 339
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+F M ERNV SWN LI GY +NG +A+ F +L + P +T +L AC+ L
Sbjct: 340 LMFSNMMERNVVSWNALIAGYTQNGENEEAVRLF-LLLKRESIWPTHYTFGNLLNACANL 398
Query: 261 GALDMGKWVHVYAESIGY------KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
L +G+ H + G+ ++FVGN+LIDMY KCG++E VF + RD +
Sbjct: 399 ADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVEDGRLVFERMLERDNV 458
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
SWN MI G A +G +AL +F +M S E+PD VT +G+LSAC+H GLV +G YFQSM
Sbjct: 459 SWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSM 518
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+ ++P +HY CM DLLGRAG LD+A + ++ MPMEPDAV+W SLL AC+ H N+ +
Sbjct: 519 TIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITL 578
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+ + L+E++P N +V+LSN+Y +LGRW+DV R++ MR G K PGCS I
Sbjct: 579 GKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQS 638
Query: 495 SVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVD 534
+ F D+RHP + IY L+ LT ++ GYVP D
Sbjct: 639 HLHVFMVKDKRHPHKKDIYLILKILTEQMKRVGYVPEADD 678
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 186/378 (49%), Gaps = 9/378 (2%)
Query: 104 GDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGY 159
G KV G++ + + ++ + V R R++ ++ + + ++ Y
Sbjct: 5 GLVRKVVGDLSFLDSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVY 64
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ G + AR++FD M R+ SWN +L G + +F+ MPER+ SWN ++
Sbjct: 65 GKCGFLEDARKVFDHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVS 124
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
G+A+ RF +AL M E D V N+++ + L AC+ L L +G +H Y
Sbjct: 125 GFAQRDRFEEALRFVVDMHSE-DFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYS 183
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
++++G+AL+DMY+KC V+ SA F+ +D R+I+SWN++I +G AL +F +M
Sbjct: 184 LDVYMGSALVDMYSKCRVVASAQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRM 243
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
N +PD +T + SAC + +R+G ++ H + + D+ +
Sbjct: 244 MNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRR 303
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+++A +MP+ D V TS++ +V+ A L F +++E +N ++ L
Sbjct: 304 VNEARLVFDRMPLR-DVVSETSMVSGYAKASSVKAARLMFSNMME---RNVVSWNALIAG 359
Query: 460 YKDLGRWQDVARLKIAMR 477
Y G ++ RL + ++
Sbjct: 360 YTQNGENEEAVRLFLLLK 377
Score = 144 bits (364), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/445 (25%), Positives = 185/445 (41%), Gaps = 90/445 (20%)
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C K+ +V E VH K F F+ L+++Y G + DA KVF M +RN
Sbjct: 28 TCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRNTFS 87
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-- 178
W A++ A G + L PERD W+ ++SG+ + A M +
Sbjct: 88 WNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHSEDF 147
Query: 179 -------------------------------------DVMSWNTLLNGYANSGDVGSFEK 201
DV + L++ Y+ V S ++
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQR 207
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
F++M RN+ SWN LI Y +NG ALE F +M+ G + P++ TL +V AC+ L
Sbjct: 208 AFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCG-IEPDEITLASVASACASLS 266
Query: 262 ALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD-------- 312
A+ G +H + Y+ ++ +GNAL+DMYAKC + A VF+ + RD
Sbjct: 267 AIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETSMV 326
Query: 313 -----------------------IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
++SWN +I G +G +A+ LF +K P
Sbjct: 327 SGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHY 386
Query: 350 TFVGILSAC-----------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
TF +L+AC H +++ GF +F+S D + + D+ + G
Sbjct: 387 TFGNLLNACANLADLKLGRQAHTHILKHGF-WFKSGEDSDIFVGN-----SLIDMYMKCG 440
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLL 423
L++ +M +E D V W +++
Sbjct: 441 LVEDGRLVFERM-LERDNVSWNAMI 464
>Medtr6g032915.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:10235820-10240817 | 20130731
Length = 1144
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/536 (36%), Positives = 303/536 (56%), Gaps = 12/536 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + F N WN M GY ++ +F +M P N FT P ++++C+
Sbjct: 439 AHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVP-NQFTYPSILKTCT 497
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA GEQ+H K GF++N ++ + LI+MY+ G + A K+F + E +VV WTA
Sbjct: 498 TLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTA 557
Query: 124 MISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISG-----YIESGDMVSARELFDK 174
MI+ Y + + D + D + ++ IS ++ G + A+
Sbjct: 558 MIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSG 617
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ D+ N L++ YA G V F+++ ++ SWN L+ G+A++G F +AL F
Sbjct: 618 YSD-DLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIF 676
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
QM G + N FT + + A + + + +GK +H GY V NALI +YAK
Sbjct: 677 AQMNKAGLEI-NSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAK 735
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG I+ A F + ++ ISWN+MI G + HG +AL LF+ MK P+ VTFVG+
Sbjct: 736 CGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGV 795
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H+GLV +G YF+SM + ++++P+ EHY C+ DLLGR+GLL +A FV +MP++P
Sbjct: 796 LSACSHVGLVDEGISYFRSMSEAHNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQP 855
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
DA++W +LL AC HKN++I E A HL+ELEPK+ A +V++SN+Y G+W R +
Sbjct: 856 DAMVWRTLLSACNVHKNIDIGEFAASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQ 915
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
M+D G +K PG S +E ++SV F++ D+ HP + IY LRGL +GYVP
Sbjct: 916 MMKDRGVKKEPGRSWVEVDNSVHAFFAGDQNHPRADMIYEYLRGLDFRAAENGYVP 971
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/432 (27%), Positives = 220/432 (50%), Gaps = 14/432 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+KVF+ + ++ +W AM +G S + ++LF +M+ + P + V+
Sbjct: 234 LSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQMHTSGICP-TPYIFSSVLS 292
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+K G+Q+H + K+GF +++C AL+ +YS G++ A ++F M +R+ V
Sbjct: 293 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 352
Query: 121 WTAMISAYISCGDVGSGRRL---LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMP 176
+ ++IS G + L ++L ++ D V + ++S G + + ++
Sbjct: 353 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAI 412
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D++ +LL+ Y D+ + + F NV WNV++ GY + + + +
Sbjct: 413 KAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQ 472
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F QM +EG +VPN FT ++L C+ LGA D+G+ +H G++ N++V + LIDMY
Sbjct: 473 IFTQMQIEG-IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMY 531
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AK G ++ A+ +F L D++SW MI G H +AL+LF +M++ + D + F
Sbjct: 532 AKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFA 591
Query: 353 GILSACTHMGLVRDGF-LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+SAC + + G ++ QS + YS I + + L R G + +A + ++
Sbjct: 592 SAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGN--ALVSLYARCGKVREAYAAFDQI- 648
Query: 412 MEPDAVIWTSLL 423
D V W SL+
Sbjct: 649 YAKDNVSWNSLV 660
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 201/436 (46%), Gaps = 15/436 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VFD+MP + + WN +FN + V LF M + +V+R CS
Sbjct: 135 AVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRM-LTKNVEFDERIFAVVLRGCS 193
Query: 64 -KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
A + R EQ+H GF+ ++F+C LI++Y G + A KVF + R+ V W
Sbjct: 194 GNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWV 253
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------ 176
AMIS G L + + S + + V E ++
Sbjct: 254 AMISGLSQNGYEEEAMLLFCQMHTSGICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQ 313
Query: 177 --NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + N L+ Y+ SG++ S E++F M +R+ S+N LI G A+ G + AL F
Sbjct: 314 GFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALF 373
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K+M ++ P+ T+ ++L AC+ +GAL GK H YA G ++ V +L+D+Y K
Sbjct: 374 KKMNLDCQK-PDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK 432
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
C I++A + F + +++ WN M+ G N + +F QM+ P+ T+ I
Sbjct: 433 CSDIKTAHEFFLACETENVVLWNVMLVGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSI 492
Query: 355 LSACTHMGLVRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
L CT +G G ++ Q + + + + D+ + G LD A+ R++ E
Sbjct: 493 LKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS--SVLIDMYAKHGKLDHALKIFRRLK-E 549
Query: 414 PDAVIWTSLLGACRTH 429
D V WT+++ H
Sbjct: 550 NDVVSWTAMIAGYTQH 565
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/385 (30%), Positives = 194/385 (50%), Gaps = 18/385 (4%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N T ++ C + + +G ++H K GF LC LI+ Y A G + A VF
Sbjct: 80 NSQTFLWLLEGCLNSRSFYDGLKLHGKILKMGFCDEVVLCERLIDFYLAFGDLNCAVNVF 139
Query: 111 GEMPERNVVVWTAMISAYIS---CGDV-GSGRRLLDLAPERDVVMWSIVISGYIESGDMV 166
EMP R++ W + + +I+ G V G RR+L E D ++++V+ G SG+ V
Sbjct: 140 DEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGC--SGNAV 197
Query: 167 SARELFDKMPNRDVMS--------WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
S R +++ + + S N L++ Y +G + S +KVFE + R+ SW +I
Sbjct: 198 SFR-FVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMI 256
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G ++NG +A+ F QM G + P + +VL AC+++ + GK +H G+
Sbjct: 257 SGLSQNGYEEEAMLLFCQMHTSG-ICPTPYIFSSVLSACTKVEFFEFGKQLHGLVLKQGF 315
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+V NAL+ +Y++ G + SA +F+C+ +RD +S+N++I+GLA G AL+LF +
Sbjct: 316 SSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKK 375
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M ++PD VT +LSAC +G + +G F S + I G + DL +
Sbjct: 376 MNLDCQKPDCVTVASLLSACASVGALPNG-KQFHSYAIKAGMTSDIVVEGSLLDLYVKCS 434
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLL 423
+ A F E + V+W +L
Sbjct: 435 DIKTAHEFFLACETE-NVVLWNVML 458
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 157/341 (46%), Gaps = 18/341 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA K+F ++ E + +W AM GY+ + + + LF EM N +
Sbjct: 537 LDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDN-IGFASAIS 595
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A+ +G Q+H + G+ + + AL+ +Y+ G V +AY F ++ ++ V
Sbjct: 596 ACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVS 655
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
W +++S + G + + + + S + + ++ + ++
Sbjct: 656 WNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIR 715
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + N L+ YA G + E+ F EMP++N SWN +I GY+++G +AL+
Sbjct: 716 KTGYDSETEVSNALITLYAKCGTIDDAERHFFEMPDKNEISWNSMITGYSQHGCGFEALK 775
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG----NAL 288
F+ M + DV+PN T V VL ACS +G +D G Y S+ N+ +
Sbjct: 776 LFEDM-KQLDVLPNHVTFVGVLSACSHVGLVDEGI---SYFRSMSEAHNLVPKPEHYACV 831
Query: 289 IDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+D+ + G++ A + + D + W T+++ +H N
Sbjct: 832 VDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKN 872
>Medtr7g056073.1 | basic helix loop helix protein, putative | HC |
chr7:19429810-19428206 | 20130731
Length = 534
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/534 (35%), Positives = 306/534 (57%), Gaps = 34/534 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A F ++ +PNT +NA+ + S ++ + M R++ P + ++ ++++C+
Sbjct: 31 AISTFTQITKPNTLVYNALIKACVHSHSSNQALLHYIHMLRSSVIP-SSYSFSSLIKACT 89
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G+ +H K GF + F+ T L+E YS
Sbjct: 90 LLTDAVNGKTLHGHVWKYGFDSHVFVQTTLVEFYS------------------------- 124
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-RDVMS 182
S G V R++ D RDV W+ +IS Y+ + D+ SA LF +MP ++ +
Sbjct: 125 ------SLGYVCDARKVFDEMSARDVYAWTTMISAYVRNNDVESAEILFVEMPEGKNTAT 178
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN +++GYA G++ E F+E+P +++ SW L+ Y +N R+ + ++ F +M+ EG
Sbjct: 179 WNAVIDGYAKLGNIERVEFFFKEIPSKDIISWTTLMSCYLKNKRYGEVVKLFHEMVNEGK 238
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
VVP++ + V+ AC+ LGAL GK VH Y G+ ++++G++LIDMYAKCG +E ++
Sbjct: 239 VVPDEVAITTVISACAHLGALGFGKEVHFYLMVSGFGIDVYIGSSLIDMYAKCGSLERSL 298
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF L +++ WN+MI+GLA HG +AL +F +M+ +P+ VTFV +L+ACTH G
Sbjct: 299 LVFYKLKEKNLFCWNSMIDGLAAHGYAKEALRMFAEMEREGIRPNRVTFVSVLTACTHAG 358
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+++G +F SM++ Y I PQ+EHYGCM DLL + GLL+ A+ +R M EP++ IW +L
Sbjct: 359 FIQEGRRFFTSMIEDYCISPQVEHYGCMVDLLSKGGLLEDALEMIRGMRFEPNSFIWGAL 418
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L C+ H+N+EIA + ++L+ LEP N ++ +L N+Y ++ RW DVA+++ M+D G
Sbjct: 419 LNGCKVHRNLEIARVTVRNLMILEPSNSGHYSLLVNMYAEVNRWSDVAKIRTEMKDLGVE 478
Query: 483 K-LPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
K PG S IE N + F + D+ HP ++ L L LRL G+VP + V
Sbjct: 479 KRCPGSSWIEINKEIHVFAASDKCHPSYGQVHLLLVELDEQLRLAGFVPEMGSV 532
>Medtr5g023040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:9142979-9147043 | 20130731
Length = 878
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/532 (37%), Positives = 307/532 (57%), Gaps = 26/532 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM--------NRAAAAPLNH 52
+G A ++F+K+P+PN +W M G++ + LF M N AA +
Sbjct: 220 LGSAWELFEKIPDPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQD 279
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
+ V+ +E CV+ W T +I Y G + +A +V+ +
Sbjct: 280 LQIDEAVK------LFKETPYKDCVS------W-----TTMINGYVRVGKLDEAREVYNQ 322
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
MP ++V TA++S I G + ++ +RD + W+ +I+GY +SG M A LF
Sbjct: 323 MPYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLF 382
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+MP ++ +SWNT+++GYA +G++ ++FE M RNV SWN LI G+ +NG + DAL+
Sbjct: 383 RQMPVKNAVSWNTMISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALK 442
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+ M EG P+ T L +C+ L AL +GK +H GY ++FV NALI MY
Sbjct: 443 SLVLMGQEGKK-PDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMY 501
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG ++SA VF ++ D+ISWN++I+G A++G +A F+QM + PD VTF+
Sbjct: 502 AKCGGVQSAEKVFKDIEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFI 561
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+LSAC+H GL G F+ M++ ++I P EHY C+ DLLGR G L++A + VR M +
Sbjct: 562 GMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKV 621
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+ +A +W SLL ACR HKN+E+ ++A L+ELEP N +N++ LSN++ + GRW+DV RL
Sbjct: 622 KANAGLWGSLLAACRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERL 681
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
++ MR+ KLPGCS IE + + F S D TESI L L+ +R
Sbjct: 682 RVLMRERRAGKLPGCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMR 733
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 135/510 (26%), Positives = 248/510 (48%), Gaps = 51/510 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FDKM + N +WN M GY + LF M A ++F+ +++ +
Sbjct: 67 ARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM-----AERDNFSWALMITCYT 121
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G + + ++ + K ++ A+I Y+ KG DA KVF +MP +++V + +
Sbjct: 122 RKGMLEKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNS 178
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
M++ Y G +G + + ER+VV W+++++G++ + D+ SA ELF+K+P+ + +SW
Sbjct: 179 MLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSW 238
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
T+L G+A G + K+F+ MP +NV SWN +I Y ++ + +A++ FK+ + V
Sbjct: 239 VTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCV 298
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+ ++ R+G LD + V+ + YK ++ AL+ + G I+ A
Sbjct: 299 -----SWTTMINGYVRVGKLDEAREVY---NQMPYK-DVAAKTALMSGLIQNGRIDEASQ 349
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ L++RD I WN+MI G G ++AL+LF QM + V++ ++S G
Sbjct: 350 VFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQM----PVKNAVSWNTMISGYAQAGE 405
Query: 364 VRDGFLYFQSM-----VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+ F++M + S+I G D L L+ Q +PD
Sbjct: 406 MDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQE-------GKKPDQST 458
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNP-ANFVMLSN----IYKDLGRWQDVARLK 473
+ L +C +++ + L EL K+ N + +SN +Y G Q ++
Sbjct: 459 FACSLSSCANLAALQVG----KQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKV- 513
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLD 503
F+ + G +I N S++ Y+L+
Sbjct: 514 -------FKDIEGVDLISWN-SLISGYALN 535
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/392 (27%), Positives = 186/392 (47%), Gaps = 55/392 (14%)
Query: 64 KAGAVREGEQVHC-VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
K G + E ++V V K +NS ++ +++ G V DA ++F +M +RN+V W
Sbjct: 29 KQGKIDEAKRVFSNVIHKNHATYNS-----MVTVFAKNGRVSDARQLFDKMSQRNLVSWN 83
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-DVM 181
MI+ Y+ V +L DL ERD W+++I+ Y G + ARELF+ +P++ D
Sbjct: 84 TMIAGYLHNNMVEEAHKLFDLMAERDNFSWALMITCYTRKGMLEKARELFELVPDKLDTA 143
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
WN ++ GYA G EKVFE+MP +++ S+N ++ GY +NG+ A++ F++M E
Sbjct: 144 CWNAMIAGYAKKGRFDDAEKVFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFERM-AER 202
Query: 242 DVV---------------------------PNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+VV PN + V +L +R G + V A
Sbjct: 203 NVVSWNLMVAGFVNNCDLGSAWELFEKIPDPNAVSWVTMLCGFARHGKI-------VEAR 255
Query: 275 SIGYK---GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
+ + N+ NA+I Y + I+ AV +F +D +SW TMING G +
Sbjct: 256 KLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDE 315
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
A +++QM D ++S G + + F + +I + M
Sbjct: 316 AREVYNQM----PYKDVAAKTALMSGLIQNGRIDEASQVFSQLNKRDAIC-----WNSMI 366
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++G + +A++ R+MP++ +AV W +++
Sbjct: 367 AGYCQSGRMSEALNLFRQMPVK-NAVSWNTMI 397
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 21/263 (7%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+++V + N + G + ++VF + +N ++N ++ +A+NGR SDA + F +
Sbjct: 14 SKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDK 73
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M V N T++A L +M + H + + + N F +I Y + G
Sbjct: 74 MSQRNLVSWN--TMIAGYLHN------NMVEEAHKLFDLMAERDN-FSWALMITCYTRKG 124
Query: 297 VIESAVDVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
++E A ++F + D+ D WN MI G A G DA +F++M D V++ +L
Sbjct: 125 MLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM----PVKDLVSYNSML 180
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+ T G + +F+ M + + + M L A K+P +P+
Sbjct: 181 AGYTQNGKMGLAMKFFERMAER-----NVVSWNLMVAGFVNNCDLGSAWELFEKIP-DPN 234
Query: 416 AVIWTSLL-GACRTHKNVEIAEL 437
AV W ++L G R K VE +L
Sbjct: 235 AVSWVTMLCGFARHGKIVEARKL 257
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
N+F N I K G I+ A VF+ + ++ ++N+M+ A +G +DA LFD+M
Sbjct: 16 NVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSDARQLFDKM- 74
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV--DHYSIIPQIEHYGCMADLLGRAG 398
Q + V++ +++ H +V + F M D++S + M R G
Sbjct: 75 ---SQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNFS-------WALMITCYTRKG 124
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+L++A +P + D W +++ + AE F+ +
Sbjct: 125 MLEKARELFELVPDKLDTACWNAMIAGYAKKGRFDDAEKVFEKM 168
>Medtr7g005870.1 | PPR containing plant-like protein | HC |
chr7:378521-375734 | 20130731
Length = 601
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/521 (38%), Positives = 301/521 (57%), Gaps = 5/521 (0%)
Query: 3 HARKVFDKMPEPNTATW--NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
HAR F+ P + N + N + L+ + ++ + +T ++++
Sbjct: 72 HARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLILK 131
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
CS + A R+G Q+H V K F + ++ T+L++MY G VG A KVF EM R++V
Sbjct: 132 GCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSLVS 191
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WTA+I Y CGD+ R+L D +RDV ++++I GY++ G M AR+LFDKM ++V
Sbjct: 192 WTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNV 251
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+SW ++++GY+ GDV +F+ MPE+NV SWN +I GY +NGR DAL+ F +M
Sbjct: 252 ISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGN 311
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
DV N+ T+V+VL A + L ALD+G WVH + + G++ V NAL+DMYAKCG I
Sbjct: 312 VDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGK 371
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VF + +D SWN +ING ++G +AL +F M +P+ +T +LSAC H
Sbjct: 372 AKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNH 431
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
GLV +G F++M + + I+PQIEHYGCM DLLGRAG LD+A ++ MP +P+ +I T
Sbjct: 432 CGLVEEGRRCFEAM-ERFGIVPQIEHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILT 490
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
S L AC ++V AE + +++E + ++VML N+Y RW DV +K M+ G
Sbjct: 491 SFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRG 550
Query: 481 FRKLPGCSVIECNDSVVEFYS--LDERHPETESIYRALRGL 519
K SVIE + EF + H E+I L L
Sbjct: 551 SNKEVAWSVIEVDGRFREFVAGYYSHSHSHLEAIQSTLGQL 591
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 139/341 (40%), Gaps = 81/341 (23%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G ARKVFD+M + +W A+ GY+ + LF M A N
Sbjct: 174 VGFARKVFDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFN--------- 224
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+I+ Y G + A +F +M +NV+
Sbjct: 225 -------------------------------VMIDGYVKMGRMDLARDLFDKMRVKNVIS 253
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-- 178
WT+M+ Y GDV R L D PE++V+ W+ +I GY ++G A +LF +M
Sbjct: 254 WTSMVHGYSEDGDVDEARFLFDCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVD 313
Query: 179 ---------------------DVMSW-----------------NTLLNGYANSGDVGSFE 200
D+ W N L++ YA G++G +
Sbjct: 314 VEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAK 373
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VFEEM E++ SWN LI GY NG +ALE F ML EG PN T+ +VL AC+
Sbjct: 374 LVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREG-FEPNQITMTSVLSACNHC 432
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
G ++ G+ E G + +ID+ + G ++ A
Sbjct: 433 GLVEEGRRCFEAMERFGIVPQIEHYGCMIDLLGRAGRLDEA 473
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 16/197 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A+ VF++M E +T +WNA+ NGY + ++ + +FA M R P N T+ V+
Sbjct: 369 IGKAKLVFEEMTEKDTGSWNALINGYGVNGCAKEALEVFAMMLREGFEP-NQITMTSVLS 427
Query: 61 SCSKAGAVREGEQVHCVAAKRGF----KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-E 115
+C+ G V EG + C A F + + C +I++ G + +A K+ MP +
Sbjct: 428 ACNHCGLVEEGRR--CFEAMERFGIVPQIEHYGC--MIDLLGRAGRLDEAEKLIQAMPYD 483
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPER------DVVMWSIVISGYIESGDMVSAR 169
N ++ T+ + A DV R+L +A + D VM + + D+ +
Sbjct: 484 PNEIILTSFLFACCYFEDVSRAERILKVAVKMEKEGAGDYVMLRNLYATERRWADVEDVK 543
Query: 170 ELFDKMPNRDVMSWNTL 186
E+ K + ++W+ +
Sbjct: 544 EMMKKRGSNKEVAWSVI 560
>Medtr7g074040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:27639852-27642151 | 20130731
Length = 707
Score = 369 bits (948), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/531 (38%), Positives = 306/531 (57%), Gaps = 16/531 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD MPE N +W +M GY + LF EM R N + +++
Sbjct: 102 ARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRR-----NVVSWTVMIGGLL 156
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K + + +++ + ++ + + T +I Y G + +A ++F EM RNV WT
Sbjct: 157 KESRIDDAKKLFDMIPEK----DVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTT 212
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
M+S Y G V R+L ++ PER+ V W+ ++ GY +SG M A ELF+ MP + +++
Sbjct: 213 MVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVAC 272
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N ++ + +G++ +FE M ER+ +WN +I + R G +AL F +M EG V
Sbjct: 273 NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREG-V 331
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
N ++++VL C+ L +LD G+ VH + +++V + LI MY KCG + A
Sbjct: 332 ALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKG 391
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+FN +D++ WN+MI G + HG +AL++F M +S QPD VTF+G+LSAC++ G
Sbjct: 392 IFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGK 451
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
V++GF F++M Y + P IEHY CM DLLGRAG +D+A+ V KMPMEPDA++W +LL
Sbjct: 452 VKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALL 511
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA--RLKIAMRDTGF 481
GACR H +++AE+A + L +LEPKN +V+LS++Y GRW+DV R KI R
Sbjct: 512 GACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRRVI-- 569
Query: 482 RKLPGCSVIECNDSVVEFYSLDER-HPETESIYRALRGLTMLLRLHGYVPN 531
K PGCS IE V F D + HPE I + L L+ LR GY P+
Sbjct: 570 -KFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPD 619
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 130/435 (29%), Positives = 197/435 (45%), Gaps = 65/435 (14%)
Query: 3 HARKVFDKMPEPN--TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ARKVFD P P A+WNAM + Y + RD ++LF +M + N V
Sbjct: 37 NARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYV-- 94
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
K G V + +V V +R N T+++ Y +G V +A K+F EMP RNVV
Sbjct: 95 ---KNGMVADARKVFDVMPER----NVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVS 147
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WT MI + + ++L D+ PE+DVV+ + +I GY + G + ARELFD+M R+V
Sbjct: 148 WTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNV 207
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+W T+++GYA +G V K+FE MPERN SW ++ GY ++GR +A E F+ M V
Sbjct: 208 FTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPV- 266
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
KW+ N +I + G +
Sbjct: 267 --------------------------KWI-------------VACNEMILQFGLAGEMHR 287
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A +F + RD +WN MI G +AL LF +M+ + + + +LS C
Sbjct: 288 ARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCAS 347
Query: 361 MGLVRDGFLYFQSMV------DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+ + G +V D Y I Y DL+ G+ ++ F+ K
Sbjct: 348 LASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNR---FLFK----- 399
Query: 415 DAVIWTSLLGACRTH 429
D V+W S++ H
Sbjct: 400 DVVMWNSMITGYSQH 414
Score = 149 bits (375), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 136/255 (53%), Gaps = 13/255 (5%)
Query: 89 LC--TALIEMYSAKGSVGDAYKVFGE--MPERNVVVWTAMISAYISCGDVGSGRRLLDLA 144
LC T+ I Y G + +A KVF +P+R + W AM+SAY L D
Sbjct: 19 LCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQM 78
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
P+R+ V ++ +ISGY+++G + AR++FD MP R+V+SW +++ GY G V EK+F
Sbjct: 79 PQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFW 138
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
EMP RNV SW V+IGG + R DA + F M+ E DVV + ++ ++G LD
Sbjct: 139 EMPRRNVVSWTVMIGGLLKESRIDDAKKLF-DMIPEKDVV----VVTNMIGGYCQVGRLD 193
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+ ++ E N+F ++ YAK G ++ A +F + R+ +SW M+ G
Sbjct: 194 EAR--ELFDEM--KVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYT 249
Query: 325 MHGNTADALSLFDQM 339
G +A LF+ M
Sbjct: 250 QSGRMKEAFELFEAM 264
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 114/272 (41%), Gaps = 37/272 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR +F+ M E + TWNAM + + + LFA M R A LN ++ V+
Sbjct: 285 MHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVA-LNFPSMISVLS 343
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ ++ G QVH + F + ++ + LI MY G + A +F ++VV+
Sbjct: 344 VCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVM 403
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W +MI+ Y G L E V + SG D
Sbjct: 404 WNSMITGYSQHG----------LGEEALNVFHDMCSSGV-----------------QPDE 436
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMP-----ERNVYSWNVLIGGYARNGRFSDALEAFK 235
+++ +L+ + SG V ++FE M E + + ++ R GR +A+E +
Sbjct: 437 VTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVE 496
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
+M +E P+ A+L AC LD+ +
Sbjct: 497 KMPME----PDAIVWGALLGACRNHMKLDLAE 524
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 163/399 (40%), Gaps = 106/399 (26%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYS---LTESHRDVVVLFAEMNRAA-AAPLNHFT-- 54
+ AR++FD+M N TW M +GY+ + R + + E N + A L +T
Sbjct: 192 LDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQS 251
Query: 55 ------------LPIV-VRSCSK-------AGAVREGEQVHCVAAKRGF-KWNSFLCTAL 93
+P+ + +C++ AG + + +R WN A+
Sbjct: 252 GRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEGMKERDEGTWN-----AM 306
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVV-WTAMISAYISCGDVGS---GR----RLLDLAP 145
I+++ KG +A +F M V + + +MIS C + S GR RL+
Sbjct: 307 IKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEF 366
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
++D+ + S++I+ Y++ GD+V A+ +F++ +DV+ WN+++ GY+ G
Sbjct: 367 DQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHG----------- 415
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
+G +AL F M G V P++ T + VL ACS
Sbjct: 416 ------------LG--------EEALNVFHDMCSSG-VQPDEVTFIGVLSACS------- 447
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
Y G + G + + +E ++ + C M++ L
Sbjct: 448 ------------YSGKVKEGFEIFEAMKCTYQVEPGIEHYAC-----------MVDLLGR 484
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSAC-THMGL 363
G +A+ L ++M +PD + + +L AC HM L
Sbjct: 485 AGRVDEAMELVEKMPM---EPDAIVWGALLGACRNHMKL 520
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 134/338 (39%), Gaps = 77/338 (22%)
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEE--MPERNVYSWNVLIGGYARNGRFSDALEAFK 235
R + S + ++ Y GD+ + KVF+ +P+R + SWN ++ Y + + DAL F
Sbjct: 17 RSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFD 76
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QM + N N +I Y K
Sbjct: 77 QMP----------------------------------------QRNTVSFNGMISGYVKN 96
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G++ A VF+ + R+++SW +M+ G G +A LF +M V G+L
Sbjct: 97 GMVADARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEMPRRNVVSWTVMIGGLL 156
Query: 356 SACTHMGLVRDGFLYFQSMVDH----YSIIPQIEHYGCMADLLG---RAGLLDQAVSFVR 408
+S +D + +IP+ + + +++G + G LD+A
Sbjct: 157 K---------------ESRIDDAKKLFDMIPE-KDVVVVTNMIGGYCQVGRLDEARELFD 200
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
+M + + WT+++ + V++A F+ + E +N ++ + Y GR ++
Sbjct: 201 EMKVR-NVFTWTTMVSGYAKNGRVDVARKLFEVMPE---RNEVSWTAMLMGYTQSGRMKE 256
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERH 506
L F +P ++ CN+ +++F E H
Sbjct: 257 AFEL--------FEAMPVKWIVACNEMILQFGLAGEMH 286
>Medtr5g018690.1 | PPR containing protein | HC |
chr5:6968759-6971652 | 20130731
Length = 663
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/574 (34%), Positives = 318/574 (55%), Gaps = 41/574 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A K+FD++P+PN +N + GYS + ++L+ M P N FT+P V+++C
Sbjct: 86 YAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILP-NQFTIPFVLKAC 144
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G VH + K G ++ + A++ +Y A G + A +VF ++ ER +V W
Sbjct: 145 AAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWN 204
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDV---------------------VMWSIVIS 157
+MI+ Y G R + ++ E DV V +V++
Sbjct: 205 SMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVT 264
Query: 158 G--------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
G Y + G++ A+ +FD+M ++DV+SW ++N YAN G + + F
Sbjct: 265 GIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFF 324
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+MP +NV SWN +I + + G +++A++ F +M G V+ ND TLVA+L +CS +G L
Sbjct: 325 NQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMCDSG-VMANDTTLVAILSSCSHMGDL 383
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+GK H Y + + NA+IDMYAKCG +++A+DVF + ++ +SWN +I L
Sbjct: 384 ALGKQAHSYIFDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGAL 443
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ 383
A+HG +A+ +F++M+ S PD +TF G+LSAC+H GLV G YF+ M + I P
Sbjct: 444 ALHGYGKEAIEMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPD 503
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+EHY CM DLLGR GLL +A+S ++KMP++PD V+W++LLGACRT+ N+ I + + L+
Sbjct: 504 VEHYACMVDLLGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLL 563
Query: 444 ELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD 503
EL N +V+LSN+Y + RW D+ + + G +K S IE + +F D
Sbjct: 564 ELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDD 623
Query: 504 ERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
+RH + SIY L L L+ GY +DV +
Sbjct: 624 KRHGASTSIYSMLGQLMDHLKSAGYPCKHLDVEE 657
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 156/303 (51%), Gaps = 8/303 (2%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
V++ L++ D+ K+F+++P+ N + +N LI GY+ + +L +++M+
Sbjct: 67 QVLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMV 126
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+G ++PN FT+ VL AC+ +G VH + +G + V NA++++Y CG+I
Sbjct: 127 CDG-ILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLI 185
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
SA VF+ + R ++SWN+MING + G + +A+ +F +M+ +PD T VG+LS
Sbjct: 186 TSARRVFDDISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLEPDVFTLVGLLSVS 245
Query: 359 THMGLVRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
T G G F++ +V I + + + D+ + G L A S +M ++ D V
Sbjct: 246 TKHGNFDLGRFVHLHMVVTGIEIDSIVTN--ALMDMYAKCGNLKCAKSVFDQM-LDKDVV 302
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
WT ++ A + N + + A + ++ KN ++ + + G + + L M
Sbjct: 303 SWTCMINA---YANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQEGLYAEAVDLFYRMC 359
Query: 478 DTG 480
D+G
Sbjct: 360 DSG 362
>Medtr1g040635.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15046911-15042560 | 20130731
Length = 737
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 208/587 (35%), Positives = 309/587 (52%), Gaps = 58/587 (9%)
Query: 3 HARKVFDKMPEP---NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
HARKVFD++ ++ TWN++ + YS V LF EM + + ++
Sbjct: 63 HARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNIL 122
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
C G G QVH + G + F+ AL++MY+ G + DA KVF M ++VV
Sbjct: 123 PVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVV 182
Query: 120 VWTAMISAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
W AM++ Y G L + E DVV WS VISGY + G A ++F +M
Sbjct: 183 TWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM 242
Query: 176 ------PN----------------------------------------RDVMSWNTLLNG 189
PN D+ N L++
Sbjct: 243 CGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDM 302
Query: 190 YANSGDVGSFEKVFEEM--PERNVYSWNVLIGGYARNGRFSDALEAFKQML-VEGDVVPN 246
YA + +F+E+ +R+V +W V+IGGYA++G + AL+ F +M ++ +VPN
Sbjct: 303 YAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPN 362
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYA--ESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
DFT+ VL++C+RL AL+ GK +H Y S+ Y +FV N LIDMY+K G +++A V
Sbjct: 363 DFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANCLIDMYSKSGDVDTAQVV 422
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + +R+ +SW +++ G MHG + DA +FD+M+ PDG+TF+ +L AC+H G+V
Sbjct: 423 FDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVPDGITFLVVLYACSHSGMV 482
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
G F M + + P +EHY CM DLLGRAG L +A + M MEP V+W SLL
Sbjct: 483 DRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRLINDMSMEPTPVVWISLLS 542
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
ACRTH N+E+AE A + L+EL+ N + +LSNIY + RW+DVAR++ M+ TG +K
Sbjct: 543 ACRTHSNIELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTGIKKR 602
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
PG S ++ + FY D H ++ IY L L ++ GYVP
Sbjct: 603 PGWSWVQGRKGMETFYVGDRTHSQSLKIYETLADLIQRIKAIGYVPQ 649
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 224/473 (47%), Gaps = 70/473 (14%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
+H+T P V ++C + G +H + GF+ N F+C A+I MY +V A KVF
Sbjct: 9 DHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKVF 68
Query: 111 GEMPERNV---VVWTAMISAYIS---------------------------------CGDV 134
E+ R + V W +++S Y CG +
Sbjct: 69 DELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGYL 128
Query: 135 G---SGRRLLDLAPE----RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL 187
G GR++ DV + + ++ Y + G M A ++F++M +DV++WN ++
Sbjct: 129 GLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFKDVVTWNAMV 188
Query: 188 NGYANSGD----VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
GY+ +G + F K+ EE E +V +W+ +I GYA+ G +A++ F+QM
Sbjct: 189 TGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQM-CGCRC 247
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG-------NMFVGNALIDMYAKCG 296
PN TL+++L AC+ +GAL GK H Y+ KG ++ V NALIDMYAKC
Sbjct: 248 RPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAKCK 307
Query: 297 VIESAVDVFN--CLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFV 352
+E A +F+ C RD+++W MI G A HG+ AL LF +M ++ P+ T
Sbjct: 308 SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTIS 367
Query: 353 GILSACTHMGLVRDG-----FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+L +C + + G ++ +S++ YS + + + C+ D+ ++G +D A
Sbjct: 368 CVLMSCARLSALNFGKQIHAYVLRRSLI--YSDVLFVAN--CLIDMYSKSGDVDTAQVVF 423
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
M + +AV WTSLL H E A F + + E P L +Y
Sbjct: 424 DSMS-KRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRK-EALVPDGITFLVVLY 474
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 158/385 (41%), Gaps = 58/385 (15%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNR---------------- 44
M A KVF++M + TWNAM GYS D + LF +M
Sbjct: 166 MEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISG 225
Query: 45 ------------------AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWN 86
N TL ++ +C+ GA+ G++ HC + K K
Sbjct: 226 YAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGE 285
Query: 87 S-------FLCTALIEMYSAKGSVGDAYKVFGEM--PERNVVVWTAMISAYISCGDVGSG 137
+ ALI+MY+ S+ A +F E+ +R+VV WT MI Y GD
Sbjct: 286 HNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHA 345
Query: 138 RRLLDLAPERD-----------VVMWSIVISGYIESGDMVSARELFDKMPNRDVM-SWNT 185
+L + D V+ S + G + A L + DV+ N
Sbjct: 346 LQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALNFGKQIHAYVLRRSLIYSDVLFVANC 405
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ Y+ SGDV + + VF+ M +RN SW L+ GY +GR DA F +M E +VP
Sbjct: 406 LIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEA-LVP 464
Query: 246 NDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
+ T + VL ACS G +D G + ++ G + ++D+ + G + A +
Sbjct: 465 DGITFLVVLYACSHSGMVDRGINLFYRMSKDFGVDPGVEHYACMVDLLGRAGRLCEATRL 524
Query: 305 FNCLDRRDI-ISWNTMINGLAMHGN 328
N + + W ++++ H N
Sbjct: 525 INDMSMEPTPVVWISLLSACRTHSN 549
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 28/269 (10%)
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ +T V AC + ++G +H +G++ N+FV NA+I MY KC + A
Sbjct: 7 TPDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARK 66
Query: 304 VFNCLDRR---DIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACT 359
VF+ L R D ++WN++++ + A+SLF +M PD V V IL C
Sbjct: 67 VFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCG 126
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
++GL G ++ + + D+ + G ++ A +M + D V W
Sbjct: 127 YLGLGLCG-RQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFERMRFK-DVVTW 184
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
+++ + E A F + E I D+ W V A R
Sbjct: 185 NAMVTGYSQNGRFEDALSLFGKMRE------------EKIESDVVTWSSVIS-GYAQRGF 231
Query: 480 G------FRKLPGCSVIECNDSVVEFYSL 502
G FR++ GC C +VV SL
Sbjct: 232 GCEAMDVFRQMCGC---RCRPNVVTLMSL 257
>Medtr4g099480.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:41303481-41301142 | 20130731
Length = 634
Score = 363 bits (931), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/447 (40%), Positives = 263/447 (58%), Gaps = 1/447 (0%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAP 145
N+ ++ Y + +A F MP R+ W M+S Y + RRLL P
Sbjct: 102 NTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMP 161
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
E++ V WS ++SGY+ GD+ +A E F P + V++W ++ GY G VG E +F +
Sbjct: 162 EKNCVTWSAMVSGYVACGDLDAAVECFYAAPMKSVITWTAMITGYMKFGRVGLAEMLFWK 221
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
+ + + +WN +I GY NGR + L+ FK ML G V PN +L +VLL CS L AL
Sbjct: 222 LSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETG-VKPNALSLTSVLLGCSDLSALQT 280
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
GK VH + +LI MY+KCG ++ + D+F + R+D+++WN MI+G A
Sbjct: 281 GKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVTWNAMISGYAQ 340
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
HG AL LFD+MK S +PD +TFV +L AC H G+V G YF SMV + I + E
Sbjct: 341 HGAGEKALHLFDEMKKSEIKPDWITFVAVLLACNHAGMVDLGTKYFNSMVKEFGIKTRPE 400
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
HYGCM DLLGRAG L +AV V+ MP +P I+ +LLGACR HK++ +AE A ++L+EL
Sbjct: 401 HYGCMVDLLGRAGRLSEAVDMVKSMPFKPHPAIFGTLLGACRIHKSMHMAEFAAKNLLEL 460
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
+P + +V L+N+Y +W+ VAR++ +M++ K PG S IE N++V EF S D
Sbjct: 461 DPTSATGYVQLANVYAAQSKWEHVARVRKSMKENNVVKPPGYSWIEINNAVHEFRSNDRL 520
Query: 506 HPETESIYRALRGLTMLLRLHGYVPNL 532
HPE SI+ L L ++L GYVP+L
Sbjct: 521 HPELVSIHEKLDKLETKMKLAGYVPDL 547
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 150/348 (43%), Gaps = 87/348 (25%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYS---LTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
AR FD MP +TA+WN M +GY+ + + R ++V E N
Sbjct: 122 ARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLVAMPEKN----------------- 164
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
CV W +A++ Y A G + A + F P ++V+
Sbjct: 165 ---------------CVT------W-----SAMVSGYVACGDLDAAVECFYAAPMKSVIT 198
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
WTAMI+ Y+ G VG L + +V W+ +I+GY+++G + +LF M
Sbjct: 199 WTAMITGYMKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGV 258
Query: 176 -PN---------------------------------RDVMSWNTLLNGYANSGDVGSFEK 201
PN RD + +L++ Y+ GD+
Sbjct: 259 KPNALSLTSVLLGCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWD 318
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F ++P ++V +WN +I GYA++G AL F +M + ++ P+ T VAVLLAC+ G
Sbjct: 319 LFVQIPRKDVVTWNAMISGYAQHGAGEKALHLFDEM-KKSEIKPDWITFVAVLLACNHAG 377
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
+D+G K+ + + G K ++D+ + G + AVD+ +
Sbjct: 378 MVDLGTKYFNSMVKEFGIKTRPEHYGCMVDLLGRAGRLSEAVDMVKSM 425
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 145/336 (43%), Gaps = 18/336 (5%)
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARELFDKM 175
NV+ +I++Y+ GD+ S R+ W+ ++ + + G+ AR+LFDK+
Sbjct: 39 NVIASNQLIASYVRSGDIDSALRVFHNMTVISTTTWNTILGAFAKKHGNFERARQLFDKI 98
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
P + +S+NT+L Y + + + F+ MP R+ SWN ++ GYA+ +A
Sbjct: 99 PEPNTVSYNTMLACYLHHFGIHNARDFFDWMPVRDTASWNTMLSGYAQVRMMDEARRLLV 158
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM---FVGNALIDMY 292
M + V + +V+ +AC L A A Y M A+I Y
Sbjct: 159 AMPEKNCVTWS--AMVSGYVACGDLDA----------AVECFYAAPMKSVITWTAMITGY 206
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
K G + A +F L + +++WN MI G +G + L LF M + +P+ ++
Sbjct: 207 MKFGRVGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKPNALSLT 266
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L C+ + ++ G Q +V + + + + G L + ++P
Sbjct: 267 SVLLGCSDLSALQTGKQVHQ-LVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPR 325
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
+ D V W +++ H E A F + + E K
Sbjct: 326 K-DVVTWNAMISGYAQHGAGEKALHLFDEMKKSEIK 360
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A +F K+ TWNAM GY + + LF M P N +L V+
Sbjct: 212 VGLAEMLFWKLSLKTLVTWNAMIAGYVDNGRAENGLKLFKTMLETGVKP-NALSLTSVLL 270
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
CS A++ G+QVH + K ++ T+LI MYS G + D++ +F ++P ++VV
Sbjct: 271 GCSDLSALQTGKQVHQLVCKSPLSRDTTAVTSLISMYSKCGDLKDSWDLFVQIPRKDVVT 330
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE 146
W AMIS Y G+G + L L E
Sbjct: 331 WNAMISGY---AQHGAGEKALHLFDE 353
>Medtr3g109380.2 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 293/482 (60%), Gaps = 16/482 (3%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
++F + ++ SC G V + K+ N F A+I Y+ A VF
Sbjct: 41 SNFLVTKMLDSCDNLGHVSYAT----LLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVF 96
Query: 111 GEM---------PERNVVVWTAMISAYISCGDVGSGRRLL--DLAPERDVVMWSIVISGY 159
+M P++ + I C +G L + + + +I Y
Sbjct: 97 VQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMY 156
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ GD+ +A ++F++M +RDV+SWN+L+ GY G + S ++F++MP R + SW +I
Sbjct: 157 TKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMIT 216
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
GY R G + DAL+ F++M + G + P++ +++AVL AC++LGAL++GKW+H+YA+ G+
Sbjct: 217 GYGRMGCYGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFL 275
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
+ NALI+MYAKCG I+ A ++F+ L +D+ISW+TMI GLA HG +A+ LF++M
Sbjct: 276 RKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEM 335
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
R P+ +TF+G+L AC+H GL +G YF M Y I P+IEHYGC+ DLLGR+G
Sbjct: 336 CKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGC 395
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
L QA+ + KMP++PD+ IW SLL +CR H+N++IA +A + L+ELEP+ N+V+L+N+
Sbjct: 396 LGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANM 455
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
Y + G+W+DV+ ++ +R+ +K PG S IE N+ V EF S D+ P ++ ++ L GL
Sbjct: 456 YAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGL 515
Query: 520 TM 521
+
Sbjct: 516 AL 517
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 44/391 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIV 58
+ +A +F ++ PN T+NA+ Y+ H + +F +M + + + FT P V
Sbjct: 58 VSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFV 117
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ R G QVH + K G ++ ALI+MY+ G + +A KVF EM R+V
Sbjct: 118 IKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDV 177
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM--- 175
+ W ++I Y+ G + S R L D P R +V W+ +I+GY G A ++F +M
Sbjct: 178 ISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMV 237
Query: 176 ---PNR----------------DVMSW-----------------NTLLNGYANSGDVGSF 199
P+ +V W N L+ YA G +
Sbjct: 238 GIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEA 297
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+F+++ E++V SW+ +IGG A +G+ +A++ F++M + V PN+ T + VLLACS
Sbjct: 298 WNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEM-CKVRVAPNEITFLGVLLACSH 356
Query: 260 LGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWN 317
G D G K+ V + S + + LID+ + G + A+D + + + D WN
Sbjct: 357 TGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWN 416
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDG 348
++++ +H N A+ Q+ + G
Sbjct: 417 SLLSSCRIHRNLQIAVIAVKQLMELEPEESG 447
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR++FD MP +W M GY + D + +F EM P + ++ V+
Sbjct: 193 MNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEP-DEISIIAVLP 251
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ GA+ G+ +H A K GF + +C ALIEMY+ G + +A+ +F ++ E++V+
Sbjct: 252 ACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVIS 311
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMP 176
W+ MI + G +L + + V I G + +G + FD M
Sbjct: 312 WSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMS 371
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDA 230
++ + L++ SG +G +MP + + WN L+ + A
Sbjct: 372 ASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIA 431
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+ A KQ++ ++ L+A + A + GKW
Sbjct: 432 VIAVKQLMELEPEESGNYVLLANMYA-------EHGKW 462
>Medtr3g109380.1 | PPR containing plant-like protein | HC |
chr3:50595856-50594240 | 20130731
Length = 538
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/482 (37%), Positives = 293/482 (60%), Gaps = 16/482 (3%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
++F + ++ SC G V + K+ N F A+I Y+ A VF
Sbjct: 41 SNFLVTKMLDSCDNLGHVSYAT----LLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVF 96
Query: 111 GEM---------PERNVVVWTAMISAYISCGDVGSGRRLL--DLAPERDVVMWSIVISGY 159
+M P++ + I C +G L + + + +I Y
Sbjct: 97 VQMLTHSTNSVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMY 156
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
+ GD+ +A ++F++M +RDV+SWN+L+ GY G + S ++F++MP R + SW +I
Sbjct: 157 TKFGDLTNACKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMIT 216
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
GY R G + DAL+ F++M + G + P++ +++AVL AC++LGAL++GKW+H+YA+ G+
Sbjct: 217 GYGRMGCYGDALDVFREMQMVG-IEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFL 275
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
+ NALI+MYAKCG I+ A ++F+ L +D+ISW+TMI GLA HG +A+ LF++M
Sbjct: 276 RKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEM 335
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
R P+ +TF+G+L AC+H GL +G YF M Y I P+IEHYGC+ DLLGR+G
Sbjct: 336 CKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGC 395
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
L QA+ + KMP++PD+ IW SLL +CR H+N++IA +A + L+ELEP+ N+V+L+N+
Sbjct: 396 LGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANM 455
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
Y + G+W+DV+ ++ +R+ +K PG S IE N+ V EF S D+ P ++ ++ L GL
Sbjct: 456 YAEHGKWEDVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGL 515
Query: 520 TM 521
+
Sbjct: 516 AL 517
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 186/391 (47%), Gaps = 44/391 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL--NHFTLPIV 58
+ +A +F ++ PN T+NA+ Y+ H + +F +M + + + FT P V
Sbjct: 58 VSYATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFV 117
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ R G QVH + K G ++ ALI+MY+ G + +A KVF EM R+V
Sbjct: 118 IKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDV 177
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM--- 175
+ W ++I Y+ G + S R L D P R +V W+ +I+GY G A ++F +M
Sbjct: 178 ISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMV 237
Query: 176 ---PNR----------------DVMSW-----------------NTLLNGYANSGDVGSF 199
P+ +V W N L+ YA G +
Sbjct: 238 GIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEA 297
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+F+++ E++V SW+ +IGG A +G+ +A++ F++M + V PN+ T + VLLACS
Sbjct: 298 WNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEM-CKVRVAPNEITFLGVLLACSH 356
Query: 260 LGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWN 317
G D G K+ V + S + + LID+ + G + A+D + + + D WN
Sbjct: 357 TGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWN 416
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDG 348
++++ +H N A+ Q+ + G
Sbjct: 417 SLLSSCRIHRNLQIAVIAVKQLMELEPEESG 447
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 18/278 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR++FD MP +W M GY + D + +F EM P + ++ V+
Sbjct: 193 MNSARELFDDMPVRTIVSWTTMITGYGRMGCYGDALDVFREMQMVGIEP-DEISIIAVLP 251
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ GA+ G+ +H A K GF + +C ALIEMY+ G + +A+ +F ++ E++V+
Sbjct: 252 ACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGCIDEAWNLFDQLVEKDVIS 311
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMP 176
W+ MI + G +L + + V I G + +G + FD M
Sbjct: 312 WSTMIGGLANHGKGYEAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMS 371
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDA 230
++ + L++ SG +G +MP + + WN L+ + A
Sbjct: 372 ASYHIEPEIEHYGCLIDLLGRSGCLGQALDTISKMPIKPDSRIWNSLLSSCRIHRNLQIA 431
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+ A KQ++ ++ L+A + A + GKW
Sbjct: 432 VIAVKQLMELEPEESGNYVLLANMYA-------EHGKW 462
>Medtr8g065730.2 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/604 (32%), Positives = 315/604 (52%), Gaps = 72/604 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA----------------- 45
+A KVFD+MP PN +WN + + YS ++ LF M R
Sbjct: 62 YASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGL 121
Query: 46 ---------------AAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC 90
+ LN T ++ SK G V+ G Q+H K GF F+
Sbjct: 122 IYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 181
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
+ L++MYS G + A KVF E+PE+NVV++ +I + CG V +RL ERD +
Sbjct: 182 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 241
Query: 151 MWSIVISGYIESGDMVSARELFDKMP---------------------------------- 176
W+ +I+G+ ++G A ++F +M
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ + L+ Y ++ S E VF++M +NV SW ++ GY +NG +A+
Sbjct: 302 IRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F M G + P+DFTL +V+ +C+ L +L+ G H A + G + V NAL+ +
Sbjct: 362 KTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y KCG IE + +FN + +D ++W +++G A G + + LF+ M +PD VTF
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+G+LSAC+ GLV G F+SM++ + I+P +HY CM DL RAG +++A +F+ KMP
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
PDA+ W +LL +CR + N++I + A + L+EL+P N A++V+LS++Y G+W++VAR
Sbjct: 541 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 600
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
L+ MRD G RK PGCS I+ + V F + D+ +P ++ IY L L + GYVP+
Sbjct: 601 LRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 660
Query: 532 LVDV 535
+ V
Sbjct: 661 MNSV 664
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 77/447 (17%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
NH+ +++ C + + + +H K +FL LI Y+ GS+ A KVF
Sbjct: 10 NHYC--ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVF 67
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+MP N+ W ++SAY G V L D P RD V W+ +ISGY G + + +
Sbjct: 68 DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127
Query: 171 LFDKMPNRD-------------------------------------VMSW----NTLLNG 189
++ M D MS+ + L++
Sbjct: 128 AYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187
Query: 190 YANSGDVGSFEKVFEEMPERNV-------------------------------YSWNVLI 218
Y+ G + KVF+E+PE+NV SW +I
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ +NG DA++ F++M +E ++ + +T +VL AC + AL GK VH Y Y
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLE-NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
K N+FV +AL++MY KC I+SA VF + ++++SW M+ G +G + +A+ F
Sbjct: 307 KDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ +PD T ++S+C ++ + +G F + +I I + L G+ G
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGA 425
++ + ++ + D V WT+L+
Sbjct: 426 SIEDSHRLFNEISFK-DEVTWTALVSG 451
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 165/312 (52%), Gaps = 17/312 (5%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
++ P + + + +IS Y + G + A ++FD+MP+ ++ SWNT+L+ Y+ G V
Sbjct: 34 HIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSE 93
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLAC 257
E +F+ MP R+ SWN LI GYA G +++A+ ML +G + N T +L+
Sbjct: 94 MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILA 153
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
S+ G + +G+ +H + G+ +FVG+ L+DMY+K G+I A VF+ L ++++ +N
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYN 213
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM--- 374
T+I GL G D+ LF +M+ + D +++ +++ T GL RD F+ M
Sbjct: 214 TLIMGLMRCGRVEDSKRLFFEMR----ERDSISWTSMITGFTQNGLDRDAIDIFREMKLE 269
Query: 375 ---VDHYSIIPQIEHY-GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
+D Y+ + G MA G+ Q +++ + + + + ++L+ K
Sbjct: 270 NLQMDQYTFGSVLTACGGVMALQEGK-----QVHAYIIRTDYKDNIFVASALVEMYCKCK 324
Query: 431 NVEIAELAFQHL 442
N++ AE F+ +
Sbjct: 325 NIKSAEAVFKKM 336
>Medtr8g065730.1 | PPR containing plant-like protein | HC |
chr8:27332922-27335168 | 20130731
Length = 748
Score = 360 bits (923), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 198/604 (32%), Positives = 315/604 (52%), Gaps = 72/604 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA----------------- 45
+A KVFD+MP PN +WN + + YS ++ LF M R
Sbjct: 62 YASKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGL 121
Query: 46 ---------------AAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC 90
+ LN T ++ SK G V+ G Q+H K GF F+
Sbjct: 122 IYQSVKAYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 181
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
+ L++MYS G + A KVF E+PE+NVV++ +I + CG V +RL ERD +
Sbjct: 182 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 241
Query: 151 MWSIVISGYIESGDMVSARELFDKMP---------------------------------- 176
W+ +I+G+ ++G A ++F +M
Sbjct: 242 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYI 301
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++ + L+ Y ++ S E VF++M +NV SW ++ GY +NG +A+
Sbjct: 302 IRTDYKDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 361
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F M G + P+DFTL +V+ +C+ L +L+ G H A + G + V NAL+ +
Sbjct: 362 KTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 420
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y KCG IE + +FN + +D ++W +++G A G + + LF+ M +PD VTF
Sbjct: 421 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+G+LSAC+ GLV G F+SM++ + I+P +HY CM DL RAG +++A +F+ KMP
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
PDA+ W +LL +CR + N++I + A + L+EL+P N A++V+LS++Y G+W++VAR
Sbjct: 541 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 600
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
L+ MRD G RK PGCS I+ + V F + D+ +P ++ IY L L + GYVP+
Sbjct: 601 LRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 660
Query: 532 LVDV 535
+ V
Sbjct: 661 MNSV 664
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 197/447 (44%), Gaps = 77/447 (17%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
NH+ +++ C + + + +H K +FL LI Y+ GS+ A KVF
Sbjct: 10 NHYC--ALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYASKVF 67
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+MP N+ W ++SAY G V L D P RD V W+ +ISGY G + + +
Sbjct: 68 DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 127
Query: 171 LFDKMPNRD-------------------------------------VMSW----NTLLNG 189
++ M D MS+ + L++
Sbjct: 128 AYNLMLKNDGSINLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 187
Query: 190 YANSGDVGSFEKVFEEMPERNV-------------------------------YSWNVLI 218
Y+ G + KVF+E+PE+NV SW +I
Sbjct: 188 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 247
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ +NG DA++ F++M +E ++ + +T +VL AC + AL GK VH Y Y
Sbjct: 248 TGFTQNGLDRDAIDIFREMKLE-NLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDY 306
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
K N+FV +AL++MY KC I+SA VF + ++++SW M+ G +G + +A+ F
Sbjct: 307 KDNIFVASALVEMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 366
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ +PD T ++S+C ++ + +G F + +I I + L G+ G
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCG 425
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGA 425
++ + ++ + D V WT+L+
Sbjct: 426 SIEDSHRLFNEISFK-DEVTWTALVSG 451
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 165/312 (52%), Gaps = 17/312 (5%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
++ P + + + +IS Y + G + A ++FD+MP+ ++ SWNT+L+ Y+ G V
Sbjct: 34 HIIKTLPYPETFLLNNLISSYAKLGSIPYASKVFDQMPHPNLYSWNTILSAYSKLGRVSE 93
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLAC 257
E +F+ MP R+ SWN LI GYA G +++A+ ML +G + N T +L+
Sbjct: 94 MEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSINLNRITFSTLLILA 153
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
S+ G + +G+ +H + G+ +FVG+ L+DMY+K G+I A VF+ L ++++ +N
Sbjct: 154 SKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYN 213
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM--- 374
T+I GL G D+ LF +M+ + D +++ +++ T GL RD F+ M
Sbjct: 214 TLIMGLMRCGRVEDSKRLFFEMR----ERDSISWTSMITGFTQNGLDRDAIDIFREMKLE 269
Query: 375 ---VDHYSIIPQIEHY-GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
+D Y+ + G MA G+ Q +++ + + + + ++L+ K
Sbjct: 270 NLQMDQYTFGSVLTACGGVMALQEGK-----QVHAYIIRTDYKDNIFVASALVEMYCKCK 324
Query: 431 NVEIAELAFQHL 442
N++ AE F+ +
Sbjct: 325 NIKSAEAVFKKM 336
>Medtr7g011100.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2910760-2909010 | 20130731
Length = 519
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/493 (37%), Positives = 289/493 (58%), Gaps = 35/493 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A ++F ++P+P+T +N M G S + + + L+ EM+R + +T P V+++C
Sbjct: 60 YAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKG-DSYTFPFVLKAC 118
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ V G VH + + GF GS N VV
Sbjct: 119 TRLFWVNTGSAVHGMVLRLGF-----------------GS--------------NAVVRN 147
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
++ + CGD+ L D + + DVV WS +I+GY GD+ AR+LF++MP RD++S
Sbjct: 148 TLLVFHAKCGDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVS 207
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN ++ GY G++ S +F+E P ++V SWN +I GY G ALE F +M G
Sbjct: 208 WNVMITGYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAG- 266
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIESA 301
V P++ TL+++L AC+ LG L+ GK VH I K + +GNALIDMYAKCG I+ +
Sbjct: 267 VFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKES 326
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
+DVF + +D+ISWN++I G+A+HG+ ++LSLF M+ ++ P+ +TFVG+L AC+H
Sbjct: 327 LDVFWSITDKDVISWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHA 386
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
G + +G+ YF M Y I P I H GCM D+LGRAGLL +A F+ M +EP+A+IW +
Sbjct: 387 GEIDEGYKYFDLMSSEYKIEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRT 446
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
LL AC+ H +VE+A++A + L + + ++V++SN+Y G W +++ M D+G
Sbjct: 447 LLAACKVHGDVELAKVANEKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGV 506
Query: 482 RKLPGCSVIE-CN 493
K+ G S +E CN
Sbjct: 507 TKIRGSSFVEACN 519
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 134/273 (49%), Gaps = 20/273 (7%)
Query: 180 VMSWNTLLNGYANSGDVGSF-EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM- 237
V++ +T L G + V ++ ++F ++P+ + + +NV+I G +++ A+ + +M
Sbjct: 41 VLTISTSLVGPTATPTVTNYAHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMH 100
Query: 238 --LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
V+GD +T VL AC+RL ++ G VH +G+ N V N L+ +AKC
Sbjct: 101 RHFVKGD----SYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKC 156
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + A +F+ + D+++W+++I G A G+ A LF++M + D V++ ++
Sbjct: 157 GDLNVATSLFDDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEM----PERDLVSWNVMI 212
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PM 412
+ G V+ G + M+ + + + + M GL QA+ +M +
Sbjct: 213 T-----GYVKQGEMESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGV 267
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
PD V SLL AC ++E + ++E+
Sbjct: 268 FPDEVTLLSLLSACADLGDLENGKKVHAKVMEI 300
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 36/272 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR +FD+ P + +WNAM GY + + + LF EM RA P + TL ++
Sbjct: 221 MESARMLFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFP-DEVTLLSLLS 279
Query: 61 SCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C+ G + G++VH + K ++ L ALI+MY+ G++ ++ VF + +++V+
Sbjct: 280 ACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWSITDKDVI 339
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKM 175
W ++I G L + + I G + +G++ + FD M
Sbjct: 340 SWNSVIVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLM 399
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ E E N+ ++ R G +A +
Sbjct: 400 SS--------------------------EYKIEPNIRHCGCMVDMLGRAGLLKEAAKFID 433
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
M +E PN +L AC G +++ K
Sbjct: 434 SMKIE----PNAIIWRTLLAACKVHGDVELAK 461
>Medtr5g006570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:988953-991582 | 20130731
Length = 838
Score = 360 bits (923), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/570 (33%), Positives = 311/570 (54%), Gaps = 41/570 (7%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
RKVFD+M E N +W ++ NGYS+ ++ V LF EM P N T+ + +C+K
Sbjct: 187 RKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEP-NPVTMVCAISACAK 245
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+ G++V + + G K N+ + AL++MY G + ++F E ++N+V++ +
Sbjct: 246 LKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTI 305
Query: 125 ISAYISCGDVGSGRRLLD------LAPERDVVMWSI------------------------ 154
+S Y+ G G +LD P++ ++ +I
Sbjct: 306 MSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGL 365
Query: 155 ---------VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
+I Y++ G +A ++FD M N+ V++WN+L+ G G++ ++F E
Sbjct: 366 ERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGE 425
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
MPE N+ SWN +IG + F +A++ ++M +G + + T+V + AC LGALD+
Sbjct: 426 MPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQG-IKGDRVTMVGIASACGYLGALDL 484
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
KW++ Y E +M +G AL+DM+++CG +A+ VF +++RD+ +W I A+
Sbjct: 485 AKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAV 544
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
GN A+ LFD+M + D FV +L+A +H G V G F +M + + PQI
Sbjct: 545 EGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIV 604
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
HYGCM DLLGRAGLL++A ++ MP++P+ VIW S L ACR HKNVE A A + + +L
Sbjct: 605 HYGCMVDLLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQL 664
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
P+ V+LSNIY G+W DVAR+++ M++ GF+K+ G S IE + + EF S DE
Sbjct: 665 APEKVGIHVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDES 724
Query: 506 HPETESIYRALRGLTMLLRLHGYVPNLVDV 535
H E I L+ + + GYVP+ +V
Sbjct: 725 HTENAQIGLMLQEINCRISQVGYVPDTTNV 754
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/470 (27%), Positives = 222/470 (47%), Gaps = 42/470 (8%)
Query: 18 TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV 77
T N + GY+ + ++ + ++ M ++FT P ++ +CSK A EG QVH V
Sbjct: 98 TCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGV 157
Query: 78 AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAY----ISCGD 133
K G + F+ +LI Y+A G V KVF EM ERNVV WT++I+ Y ++
Sbjct: 158 VVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEA 217
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS----WNTLLNG 189
V ++++ E + V IS + D+ +++ + M V S N LL+
Sbjct: 218 VCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDM 277
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y GD+ + ++F+E ++N+ +N ++ Y ++G + L +ML +G P+ T
Sbjct: 278 YMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQKGQ-RPDKVT 336
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+++ + AC++LG L +GK H Y G + + NA+IDMY KCG E+A VF+ +
Sbjct: 337 MLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAACKVFDSMS 396
Query: 310 RRDIISWNTMINGLAMHG--------------------NT-----------ADALSLFDQ 338
+ +++WN++I GL G NT +A+ L +
Sbjct: 397 NKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLRE 456
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+N + D VT VGI SAC ++G + D + + ++ I ++ + D+ R G
Sbjct: 457 MQNQGIKGDRVTMVGIASACGYLGAL-DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCG 515
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
A+ M + D WT+ + N + A F +++ + K
Sbjct: 516 DPLNAMRVFENME-KRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQDVK 564
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIG 219
++ ++L M + V + N L+ G S E ++Y+ N LI
Sbjct: 45 LIELKQLHCNMLKKGVFNINKLIAACVQMGTHESLNYALNAFKEDEGTKCSLYTCNTLIR 104
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
GYA +G +A+ + M++ +VP++FT +L ACS++ A G VH +G
Sbjct: 105 GYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLV 164
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
++FV N+LI YA CG ++ VF+ + R+++SW ++ING ++ +A+ LF +M
Sbjct: 165 KDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEM 224
Query: 340 KNSREQPDGVTFVGILSACTHM 361
+P+ VT V +SAC +
Sbjct: 225 VEVGVEPNPVTMVCAISACAKL 246
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 45/265 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F +MPE N +WN M + + L EM + T+ + +C
Sbjct: 419 ALRIFGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKG-DRVTMVGIASACG 477
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ + ++ K + L TAL++M+S G +A +VF M +R+V WTA
Sbjct: 478 YLGALDLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTA 537
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS- 182
I G+ A ELFD+M +DV +
Sbjct: 538 AIRVKAV-------------------------------EGNAKGAIELFDEMLKQDVKAD 566
Query: 183 ---WNTLLNGYANSGDVGSFEKVFEEMPE-----RNVYSWNVLIGGYARNGRFSDALEAF 234
+ LL +++ G V ++F M + + + ++ R G +A +
Sbjct: 567 DFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEAFDLM 626
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSR 259
K M ++ PND + L AC +
Sbjct: 627 KSMPIK----PNDVIWGSFLAACRK 647
>Medtr5g006420.1 | organelle transcript processing protein, putative
| HC | chr5:911890-915336 | 20130731
Length = 726
Score = 359 bits (921), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 194/574 (33%), Positives = 303/574 (52%), Gaps = 44/574 (7%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF ++P P+T N + S + + L+ + A L+ F+ P ++++ SK
Sbjct: 76 VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
A G ++H +A+K GF + F+ T LI MY++ + DA +F +M + V W +I
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIID 195
Query: 127 AYISCGDVGSGRRLL------DLAPER--------------------------------- 147
Y G RL D+ P+
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAI 255
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
D + + +I+ Y G M AR+++D + ++ ++ +L+GYA G V +F++M
Sbjct: 256 DSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMI 315
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
ER++ W+ +I GYA + + +AL+ F +ML + VP+ T+++V+ ACS +GAL
Sbjct: 316 ERDLVCWSAMISGYAESDQPQEALKLFDEML-QKRSVPDQITMLSVISACSHVGALAQAN 374
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
W+H Y + G+ + V NALIDMYAKCG + A +VF + R+++ISW++MIN AMHG
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHG 434
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
N A+ LF +MK +P+GVTF+G+L AC H GLV +G F SM++ + I P EHY
Sbjct: 435 NADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHY 494
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
GCM DL RA L +A+ + MP P+ +IW SL+ AC+ H E+ E A + L+ELEP
Sbjct: 495 GCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLELEP 554
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
+ V+LSNIY RW DV ++ +M G K S IE N+ V F D H
Sbjct: 555 DHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHK 614
Query: 508 ETESIYRALRGLTMLLRLHGYVPN----LVDVAQ 537
+++ IY L + L+L GY P+ L+D+ +
Sbjct: 615 QSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEE 648
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 173/365 (47%), Gaps = 43/365 (11%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FDKM P+ WN + +GY + D + LF +M + P + L V+ +C
Sbjct: 175 ARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKP-DSVILCTVLSACG 233
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
AG + G +H G+ +S L TALI MY+ G++ A K++ + ++++V TA
Sbjct: 234 HAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTA 293
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PN 177
M+S Y G V R + D ERD+V WS +ISGY ES A +LFD+M P+
Sbjct: 294 MLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPD 353
Query: 178 RDVM----------------SW-----------------NTLLNGYANSGDVGSFEKVFE 204
+ M +W N L++ YA G++ +VFE
Sbjct: 354 QITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFE 413
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
MP +NV SW+ +I +A +G A++ F++M E ++ PN T + VL AC G ++
Sbjct: 414 NMPRKNVISWSSMINAFAMHGNADSAIKLFRRM-KEVNIEPNGVTFIGVLYACGHAGLVE 472
Query: 265 MG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMING 322
G K G ++D+Y + + A+++ + ++I W ++++
Sbjct: 473 EGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSA 532
Query: 323 LAMHG 327
+HG
Sbjct: 533 CQVHG 537
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 124/250 (49%), Gaps = 21/250 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+M E + W+AM +GY+ ++ ++ + LF EM + + P + T+ V+ +CS
Sbjct: 307 ARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVP-DQITMLSVISACS 365
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ + +H + GF + ALI+MY+ G++ A +VF MP +NV+ W++
Sbjct: 366 HVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSS 425
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDK 174
MI+A+ G+ S +L E ++ V+++ +G +E G+ +LF
Sbjct: 426 MINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGE-----KLFSS 480
Query: 175 MPNRDVMS-----WNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFS 228
M N +S + +++ Y + + ++ E MP NV W L+ +G
Sbjct: 481 MINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAE 540
Query: 229 DALEAFKQML 238
A K++L
Sbjct: 541 LGEFAAKRLL 550
>Medtr8g069550.1 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 358 bits (920), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 315/604 (52%), Gaps = 72/604 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAP------------- 49
+A KVFD+MP PN +WN + + YS ++ LF M R
Sbjct: 71 YACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGL 130
Query: 50 -------------------LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC 90
LN T ++ SK G V+ G Q+H K GF F+
Sbjct: 131 IYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 190
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
+ L++MYS G + A KVF E+PE+NVV++ +I + CG V +RL ERD +
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250
Query: 151 MWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNG----------------- 189
W+ +I+G+ ++G A ++F +M D ++ ++L
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310
Query: 190 ------------------YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
Y ++ S E VF++M +NV SW ++ GY +NG +A+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F M G + P+DFTL +V+ +C+ L +L+ G H A + G + V NAL+ +
Sbjct: 371 KTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 429
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y KCG IE + +FN + +D ++W +++G A G + + LF+ M +PD VTF
Sbjct: 430 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 489
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+G+LSAC+ GLV G F+SM++ + I+P +HY CM DL RAG +++A +F+ KMP
Sbjct: 490 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 549
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
PDA+ W +LL +CR + N++I + A + L+EL+P N A++V+LS++Y G+W++VAR
Sbjct: 550 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 609
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
L+ MRD G RK PGCS I+ + V F + D+ +P ++ IY L L + GYVP+
Sbjct: 610 LRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 669
Query: 532 LVDV 535
+ V
Sbjct: 670 MNSV 673
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 196/447 (43%), Gaps = 77/447 (17%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
NH+ +++ C + + + +H K +FL LI Y+ GS+ A KVF
Sbjct: 19 NHYC--ALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVF 76
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+MP N+ W ++SAY G V L D P RD V W+ +ISGY G + + +
Sbjct: 77 DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 136
Query: 171 LFDKMPNRD-------------------------------------VMSW----NTLLNG 189
++ M D MS+ + L++
Sbjct: 137 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 196
Query: 190 YANSGDVGSFEKVFEEMPERNV-------------------------------YSWNVLI 218
Y+ G + KVF+E+PE+NV SW +I
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ +NG DA++ F++M +E ++ + +T +VL AC + AL GK VH Y Y
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLE-NLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDY 315
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
K N+FV +AL+ MY KC I+SA VF + ++++SW M+ G +G + +A+ F
Sbjct: 316 KDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ +PD T ++S+C ++ + +G F + +I I + L G+ G
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGA 425
++ + ++ + D V WT+L+
Sbjct: 435 SIEDSHRLFNEISFK-DEVTWTALVSG 460
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 165/310 (53%), Gaps = 15/310 (4%)
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
++ P + + + +IS Y + G + A ++FD+MP+ ++ SWNT+L+ Y+ G V
Sbjct: 44 IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 103
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLACS 258
E +F+ MP R+ SWN LI GYA G +++A+ ML +G N T +L+ S
Sbjct: 104 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILAS 163
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+ G + +G+ +H + G+ +FVG+ L+DMY+K G+I A VF+ L ++++ +NT
Sbjct: 164 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 223
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM---- 374
+I GL G D+ LF +M+ + D +++ +++ T GL RD F+ M
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMR----ERDSISWTSMITGFTQNGLDRDAIDIFREMKLEN 279
Query: 375 --VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
+D Y+ + GC+ L + G Q +++ + + + + ++L+ KN+
Sbjct: 280 LQMDQYTFGSVLTACGCVMAL--QEG--KQVHAYIIRTDYKDNIFVASALVVMYCKCKNI 335
Query: 433 EIAELAFQHL 442
+ AE F+ +
Sbjct: 336 KSAEAVFKKM 345
>Medtr8g069550.2 | PPR containing plant-like protein | HC |
chr8:29180878-29178605 | 20130731
Length = 757
Score = 358 bits (920), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 199/604 (32%), Positives = 315/604 (52%), Gaps = 72/604 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAP------------- 49
+A KVFD+MP PN +WN + + YS ++ LF M R
Sbjct: 71 YACKVFDQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGL 130
Query: 50 -------------------LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC 90
LN T ++ SK G V+ G Q+H K GF F+
Sbjct: 131 IYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVG 190
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
+ L++MYS G + A KVF E+PE+NVV++ +I + CG V +RL ERD +
Sbjct: 191 SPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSI 250
Query: 151 MWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNG----------------- 189
W+ +I+G+ ++G A ++F +M D ++ ++L
Sbjct: 251 SWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGCVMALQEGKQVHAYI 310
Query: 190 ------------------YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
Y ++ S E VF++M +NV SW ++ GY +NG +A+
Sbjct: 311 IRTDYKDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAV 370
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F M G + P+DFTL +V+ +C+ L +L+ G H A + G + V NAL+ +
Sbjct: 371 KTFSDMQKYG-IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTL 429
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y KCG IE + +FN + +D ++W +++G A G + + LF+ M +PD VTF
Sbjct: 430 YGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 489
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+G+LSAC+ GLV G F+SM++ + I+P +HY CM DL RAG +++A +F+ KMP
Sbjct: 490 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 549
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
PDA+ W +LL +CR + N++I + A + L+EL+P N A++V+LS++Y G+W++VAR
Sbjct: 550 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 609
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
L+ MRD G RK PGCS I+ + V F + D+ +P ++ IY L L + GYVP+
Sbjct: 610 LRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGYVPD 669
Query: 532 LVDV 535
+ V
Sbjct: 670 MNSV 673
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 196/447 (43%), Gaps = 77/447 (17%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
NH+ +++ C + + + +H K +FL LI Y+ GS+ A KVF
Sbjct: 19 NHYC--ALLKLCCETRNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVF 76
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+MP N+ W ++SAY G V L D P RD V W+ +ISGY G + + +
Sbjct: 77 DQMPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVK 136
Query: 171 LFDKMPNRD-------------------------------------VMSW----NTLLNG 189
++ M D MS+ + L++
Sbjct: 137 AYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDM 196
Query: 190 YANSGDVGSFEKVFEEMPERNV-------------------------------YSWNVLI 218
Y+ G + KVF+E+PE+NV SW +I
Sbjct: 197 YSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMI 256
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
G+ +NG DA++ F++M +E ++ + +T +VL AC + AL GK VH Y Y
Sbjct: 257 TGFTQNGLDRDAIDIFREMKLE-NLQMDQYTFGSVLTACGCVMALQEGKQVHAYIIRTDY 315
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
K N+FV +AL+ MY KC I+SA VF + ++++SW M+ G +G + +A+ F
Sbjct: 316 KDNIFVASALVVMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSD 375
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ +PD T ++S+C ++ + +G F + +I I + L G+ G
Sbjct: 376 MQKYGIEPDDFTLGSVISSCANLASLEEG-AQFHARALTSGLISFITVSNALVTLYGKCG 434
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGA 425
++ + ++ + D V WT+L+
Sbjct: 435 SIEDSHRLFNEISFK-DEVTWTALVSG 460
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 165/310 (53%), Gaps = 15/310 (4%)
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSF 199
++ P + + + +IS Y + G + A ++FD+MP+ ++ SWNT+L+ Y+ G V
Sbjct: 44 IIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGRVSEM 103
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLACS 258
E +F+ MP R+ SWN LI GYA G +++A+ ML +G N T +L+ S
Sbjct: 104 EYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILAS 163
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+ G + +G+ +H + G+ +FVG+ L+DMY+K G+I A VF+ L ++++ +NT
Sbjct: 164 KRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNT 223
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM---- 374
+I GL G D+ LF +M+ + D +++ +++ T GL RD F+ M
Sbjct: 224 LIMGLMRCGRVEDSKRLFFEMR----ERDSISWTSMITGFTQNGLDRDAIDIFREMKLEN 279
Query: 375 --VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
+D Y+ + GC+ L + G Q +++ + + + + ++L+ KN+
Sbjct: 280 LQMDQYTFGSVLTACGCVMAL--QEG--KQVHAYIIRTDYKDNIFVASALVVMYCKCKNI 335
Query: 433 EIAELAFQHL 442
+ AE F+ +
Sbjct: 336 KSAEAVFKKM 345
>Medtr3g052720.1 | organelle transcript processing protein, putative
| HC | chr3:20868148-20864227 | 20130731
Length = 1150
Score = 357 bits (917), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/635 (31%), Positives = 328/635 (51%), Gaps = 102/635 (16%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
++ K+F+ + PNT WN + + + + F ++ +H+T PI++RSC
Sbjct: 96 YSLKIFNHLHNPNTFIWNTIMRSHLELHNSPQQALNFYKLFLFQNTSPDHYTYPILLRSC 155
Query: 63 SKAGAVREGEQVH------------------------C---VAAKRGFK---------WN 86
+ + EG+Q+H C V+A + FK WN
Sbjct: 156 TARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVLDLVSWN 215
Query: 87 SFLC--------------------------TALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ L ++I ++ +G + A +F + +++V
Sbjct: 216 TLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDMVS 275
Query: 121 WTAMISAY-----------------------------------ISCGDVGSGRRLLDLAP 145
W+AMIS Y S V GR + LA
Sbjct: 276 WSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLSAVRMGRSVHGLAA 335
Query: 146 E---RDVV-MWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+ +D V + + +I Y G+++ A+++F D++SWN++++GY G V +K
Sbjct: 336 KIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMISGYLMCGYVEDAKK 395
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F+ M E++V SW+ +I GYA++G FS+A+ F++M + G + P++ +V+V+ AC+ +
Sbjct: 396 LFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLG-IRPDETAIVSVISACTHMA 454
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
ALD+GKW+H Y + N+ +G L+DMY KCG +E+A++VF ++ + + +WN +I
Sbjct: 455 ALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAMEEKGVSTWNALIL 514
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
GLAM+G +L++F MK ++ P+ +TF+G+L AC HMGLV +G YF SM + I
Sbjct: 515 GLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIE 574
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P ++HYGCM DLLGRAGLL +A + MPM PD W +LLGACR H N E+ E +
Sbjct: 575 PNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWGALLGACRKHHNNEMGERLGRK 634
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
LI+L+P + V+LSNIY G W DV ++ M G K+PGCS+IE N V EF +
Sbjct: 635 LIQLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHGVVKMPGCSMIEANGIVHEFLA 694
Query: 502 LDERHPETESIYRALRGLTMLLRLHGYVPNLVDVA 536
D+ HP+ + I L + L++ GY P +V+
Sbjct: 695 GDKTHPQIKDIEHMLNEVAAKLKIEGYAPITSEVS 729
>Medtr2g018870.1 | PPR containing plant-like protein | HC |
chr2:6013889-6015841 | 20130731
Length = 613
Score = 355 bits (910), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 186/488 (38%), Positives = 294/488 (60%), Gaps = 25/488 (5%)
Query: 65 AGAVREGEQVHCVAAKRGFKWNS-----FLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
A + ++ +Q+H + + N+ +L ++ S + A+ VF + NV
Sbjct: 50 ASSKQKLKQIHAFSIRHNVPLNNPDIGKYLIFTIV---SLSAPMSYAHNVFTLLYNPNVF 106
Query: 120 VWTAMISAYI----SCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-----GDM---VS 167
W MI Y S +G R++L E D + ++ +S G+M V+
Sbjct: 107 TWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTHTYPFLLKAISKSLNVRDGEMIHSVT 166
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
R F+ + + N+LL+ YA GD S KVFE M ER++ +WN +I G+A NG+
Sbjct: 167 VRNGFESL----IFVRNSLLHIYAACGDTESAYKVFELMGERDLVAWNSVINGFALNGKP 222
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
++AL F++M ++G V P+ FT+V++ AC+ LGAL++G+ VHVY +G GN+ V N+
Sbjct: 223 NEALSLFREMSLKG-VEPDGFTVVSLFSACAELGALELGRRVHVYLLKVGLTGNLHVNNS 281
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+D YAKCG I A VF+ + R+++SW +++ GLA++G +AL LF +M+ + P
Sbjct: 282 LLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFGEEALGLFKEMERQKIVPR 341
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+TFVG+L AC+H G++ +GF YF+ M + Y I P+IEHYGCM DLL RAGL+ +A ++
Sbjct: 342 EITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYGCMVDLLSRAGLVKRAYEYI 401
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
+ MPM+P+AVIW +LLGAC H ++ + E+A HL++LEPK+ ++V+LSN+Y RW
Sbjct: 402 QSMPMQPNAVIWRTLLGACTVHGDLSLGEIARSHLLKLEPKHSGDYVLLSNLYASERRWS 461
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
DV ++ +M + G K PG S++E + V EF D HP ++ +Y L +T LL+L G
Sbjct: 462 DVQTVRRSMIEDGVWKTPGYSLVELGNRVFEFTMGDRSHPRSQDVYALLEKITELLKLEG 521
Query: 528 YVPNLVDV 535
YVP+ +V
Sbjct: 522 YVPHTANV 529
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 169/345 (48%), Gaps = 22/345 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A VF + PN TWN M GY+ +++ + L+ +M + P H T P +++
Sbjct: 90 MSYAHNVFTLLYNPNVFTWNTMIRGYAESDNSTPALGLYRKMLGSCVEPDTH-TYPFLLK 148
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ SK+ VR+GE +H V + GF+ F+ +L+ +Y+A G AYKVF M ER++V
Sbjct: 149 AISKSLNVRDGEMIHSVTVRNGFESLIFVRNSLLHIYAACGDTESAYKVFELMGERDLVA 208
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W ++I+ + G L R++ + + G+ + EL R V
Sbjct: 209 WNSVINGFALNGKPNEALSLF-----REMSLKGVEPDGFTVVSLFSACAELGALELGRRV 263
Query: 181 MSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ N+LL+ YA G + ++VF EM ERNV SW L+ G A NG
Sbjct: 264 HVYLLKVGLTGNLHVNNSLLDFYAKCGSIREAQQVFSEMSERNVVSWTSLVVGLAVNGFG 323
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+AL FK+M + +VP + T V VL ACS G LD G + E G + +
Sbjct: 324 EEALGLFKEMERQ-KIVPREITFVGVLYACSHCGMLDEGFNYFRRMKEEYGIRPRIEHYG 382
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTA 330
++D+ ++ G+++ A + + + + + W T++ +HG+ +
Sbjct: 383 CMVDLLSRAGLVKRAYEYIQSMPMQPNAVIWRTLLGACTVHGDLS 427
>Medtr7g083820.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 355 bits (910), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 301/582 (51%), Gaps = 83/582 (14%)
Query: 5 RKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
R +F K + + +WN++ ++ + + F+ M + + P N T P ++SCS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHP-NRSTFPCTIKSCS 97
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+Q+H A G+ + F+ +ALI+MYS
Sbjct: 98 SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYS------------------------- 132
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
CG + R+L D PER+VV W+ +ISGY+++ A LF + D +
Sbjct: 133 ------KCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186
Query: 184 --------------------------------------------------NTLLNGYANS 193
NTL++ YA
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G++ KVF+ M E +V SWN LI YA+NG +A F M+ G+V N TL AV
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAV 306
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
LLAC+ GAL +GK +H + + N+ VG +++DMY KCG +E A F+ L R+++
Sbjct: 307 LLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNV 366
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
SW M+ G MHG+ +A+ +F +M +P+ +TFV +L+AC+H GL+++G+ +F
Sbjct: 367 KSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK 426
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
M + + P IEHY CM DLLGRAG L +A +++M ++PD ++W SLLGACR HKNVE
Sbjct: 427 MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486
Query: 434 IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
+ E++ + L +L+P N +V+LSNIY D GRW DV R++I M++ G K PG S++E
Sbjct: 487 LGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHK 546
Query: 494 DSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
V F D+ HP+ E IY L L + L+ GY+PN+ V
Sbjct: 547 GRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSV 588
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 22/350 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFT------ 54
+ ARK+FD++PE N +W +M +GY E R+ V LF E +
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGV 196
Query: 55 ----LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
L V+ +C++ E VH +A K+GF+ + L++ Y+ G + + KVF
Sbjct: 197 DSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVF 256
Query: 111 GEMPERNVVVWTAMISAYISCG-DVGSGRRLLDLAPERDV----VMWSIVISGYIESGDM 165
M E +V W ++I+ Y G V + D+ +V V S V+ SG +
Sbjct: 257 DGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGAL 316
Query: 166 VSARELFD---KMPNRD-VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY 221
+ + D KM D ++ ++++ Y G V K F+ + +NV SW V++ GY
Sbjct: 317 QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY 376
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKG 280
+G +A++ F +M+ G + PN T V+VL ACS G L G W + +
Sbjct: 377 GMHGHGKEAMKVFYEMIRCG-IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEP 435
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNT 329
+ + ++D+ + G ++ A + + + D I W +++ +H N
Sbjct: 436 GIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV 485
>Medtr7g083820.2 | pentatricopeptide (PPR) repeat protein | HC |
chr7:32273955-32271537 | 20130731
Length = 672
Score = 355 bits (910), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/582 (33%), Positives = 301/582 (51%), Gaps = 83/582 (14%)
Query: 5 RKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
R +F K + + +WN++ ++ + + F+ M + + P N T P ++SCS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHP-NRSTFPCTIKSCS 97
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+Q+H A G+ + F+ +ALI+MYS
Sbjct: 98 SLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYS------------------------- 132
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
CG + R+L D PER+VV W+ +ISGY+++ A LF + D +
Sbjct: 133 ------KCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDY 186
Query: 184 --------------------------------------------------NTLLNGYANS 193
NTL++ YA
Sbjct: 187 DEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKC 246
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
G++ KVF+ M E +V SWN LI YA+NG +A F M+ G+V N TL AV
Sbjct: 247 GEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAV 306
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
LLAC+ GAL +GK +H + + N+ VG +++DMY KCG +E A F+ L R+++
Sbjct: 307 LLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNV 366
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
SW M+ G MHG+ +A+ +F +M +P+ +TFV +L+AC+H GL+++G+ +F
Sbjct: 367 KSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWHWFNK 426
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
M + + P IEHY CM DLLGRAG L +A +++M ++PD ++W SLLGACR HKNVE
Sbjct: 427 MKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNVE 486
Query: 434 IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
+ E++ + L +L+P N +V+LSNIY D GRW DV R++I M++ G K PG S++E
Sbjct: 487 LGEISARKLFKLDPSNCGYYVLLSNIYADAGRWDDVERMRILMKNHGLLKTPGYSIVEHK 546
Query: 494 DSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
V F D+ HP+ E IY L L + L+ GY+PN+ V
Sbjct: 547 GRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEVGYMPNVTSV 588
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 160/350 (45%), Gaps = 22/350 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFT------ 54
+ ARK+FD++PE N +W +M +GY E R+ V LF E +
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGV 196
Query: 55 ----LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
L V+ +C++ E VH +A K+GF+ + L++ Y+ G + + KVF
Sbjct: 197 DSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVF 256
Query: 111 GEMPERNVVVWTAMISAYISCG-DVGSGRRLLDLAPERDV----VMWSIVISGYIESGDM 165
M E +V W ++I+ Y G V + D+ +V V S V+ SG +
Sbjct: 257 DGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGAL 316
Query: 166 VSARELFD---KMPNRD-VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY 221
+ + D KM D ++ ++++ Y G V K F+ + +NV SW V++ GY
Sbjct: 317 QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY 376
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKG 280
+G +A++ F +M+ G + PN T V+VL ACS G L G W + +
Sbjct: 377 GMHGHGKEAMKVFYEMIRCG-IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEP 435
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNT 329
+ + ++D+ + G ++ A + + + D I W +++ +H N
Sbjct: 436 GIEHYSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSLLGACRIHKNV 485
>Medtr4g119120.1 | PPR containing plant-like protein | HC |
chr4:49335688-49337418 | 20130731
Length = 576
Score = 352 bits (902), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 180/514 (35%), Positives = 295/514 (57%), Gaps = 34/514 (6%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+ + P++ +W + +S + V L+ +M R P +H + +++SC++
Sbjct: 60 ILHHLRNPDSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSH-AVSSILKSCARVE 118
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
G +H K GF ++ TAL+++Y G V A KVF EMP++NVV W +++S
Sbjct: 119 DDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDEMPDKNVVSWNSLLS 178
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM--------------------- 165
YI G++ G+R D P +DV+ W+ ++SGY ++G M
Sbjct: 179 GYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFASWNTM 238
Query: 166 ----------VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
V ARELFD MP R+ +S T++ GY+ SGDV S ++F++M ++++ S+N
Sbjct: 239 ITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLLSYN 298
Query: 216 VLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
+I YA++ + +AL+ F ML + + P+ TL +V+ ACS+LG L+ +W+
Sbjct: 299 AMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIESQIN 358
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ G + + ALID+YAKCG I+ A ++F+ L +RD+++++ MI G ++G +DA+
Sbjct: 359 NFGIVLDDHLATALIDLYAKCGSIDKAYELFHGLRKRDVVAYSAMIYGCGINGRASDAVE 418
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
LF++M P+ VT+ GIL+A H GL +G+ F SM D+ I+P ++HYG M DLL
Sbjct: 419 LFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDN-GIVPSVDHYGIMVDLL 477
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
GRAG LD+A + KMPM+P+ +W +LL ACR H N+++ E+A QH I+LE + +
Sbjct: 478 GRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESETAGYYS 537
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS 488
+LS IY +G+W D +L + K+PGCS
Sbjct: 538 LLSGIYATVGKWNDAKKLTTGVEGKKIIKIPGCS 571
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 149/370 (40%), Gaps = 83/370 (22%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ FD++P + +WN M +GY+ LF +M P +F
Sbjct: 186 LDEGQRFFDEIPLKDVISWNCMVSGYAKAGKMDRACYLFQQM------PERNFA------ 233
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
WN+ +I Y GS+ +A ++F MP RN V
Sbjct: 234 -----------------------SWNT-----MITGYVDCGSIVEARELFDAMPRRNSVS 265
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF-------- 172
MI+ Y GDV S R L D ++D++ ++ +I+ Y +S A +LF
Sbjct: 266 LITMIAGYSKSGDVHSARELFDQMDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKPDS 325
Query: 173 ----DKMPNRDVMS----------W-------------------NTLLNGYANSGDVGSF 199
DKM V+S W L++ YA G +
Sbjct: 326 SLHPDKMTLASVISACSQLGNLEHWRWIESQINNFGIVLDDHLATALIDLYAKCGSIDKA 385
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
++F + +R+V +++ +I G NGR SDA+E F++M E ++PN T +L A +
Sbjct: 386 YELFHGLRKRDVVAYSAMIYGCGINGRASDAVELFERMAGEC-IIPNLVTYTGILTAYNH 444
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNT 318
G + G + + G ++ ++D+ + G ++ A + + + ++ W
Sbjct: 445 AGLAEEGYRCFISMKDNGIVPSVDHYGIMVDLLGRAGWLDEAYKLIMKMPMQPNVGVWGA 504
Query: 319 MINGLAMHGN 328
++ +H N
Sbjct: 505 LLLACRLHDN 514
>Medtr4g094402.5 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 290/510 (56%), Gaps = 23/510 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+ MPE N + NA+ NG+ L V F +M +A L+ +V
Sbjct: 150 MDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLV-- 207
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVF-------G 111
+ G + ++ G + + + LI Y +G V +A VF G
Sbjct: 208 ---RNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 264
Query: 112 EMPE------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
E E RNVV W +M+ Y+ GDV S R L D ERD W+ VI GY++ GDM
Sbjct: 265 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 324
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A +LF +MP DV+SWN++++G++ GD+ ++ FE MP +N+ SWN +I GY +N
Sbjct: 325 EEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNE 384
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+ A+E F QM ++G+ P+ TL ++L + L L +GK +H + ++ +
Sbjct: 385 DYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPIN 442
Query: 286 NALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+LI MY++CG I A VFN + +D+I+WN MI G A HG A AL LF++MK +
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKI 502
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
QP +TF+ +L+AC H GLV +G F SM++ Y I P++EH+ + D+LGR G L +A+
Sbjct: 503 QPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAM 562
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP++PD +W +LLGACR H NV++A++A + LI LEP++ A + +L N+Y DLG
Sbjct: 563 DLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLG 622
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+W D R++ M + +K G S I+ +
Sbjct: 623 QWDDAERVRALMEENNVKKQAGYSWIDSTN 652
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 160/304 (52%), Gaps = 21/304 (6%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD---VGSGRRLLD 142
N+ ++I Y + + A ++F EMP R++V W +IS Y SC V GR+L D
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ P+RD V W+ VISGY ++G M A E+F+ MP R+V+S N ++NG+ +GDV S
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLG 261
F +M ER+ S + L+ G RNG+ A E + EGD + L+A + G
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRG 247
Query: 262 ALDMGKWVHVYAESIGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
++ + HV+ + +G N+ N+++ Y K G + SA ++F+ +
Sbjct: 248 MVEEAR--HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE 305
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
RD SWNT+I G G+ +A LF +M PD +++ I+S + +G ++ +
Sbjct: 306 RDACSWNTVIGGYVQIGDMEEASKLFLEMP----IPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 371 FQSM 374
F++M
Sbjct: 362 FENM 365
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 34/375 (9%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + A +F RN V W +MI+ Y+ ++ R+L D P RD+V W+++ISGY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 161 E---SGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
S + R+LFD MP RD +SWNT+++GYA +G + ++FE MPERNV S N +
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-YAESI 276
+ G+ NG A+ F++M G+ + +L ++ R G LDM + V Y
Sbjct: 172 VNGFLLNGDVDSAVGFFRKM---GE--RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 277 GYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD-------------RRDIISWNTMING 322
K ++ + N LI Y + G++E A VF+ + +R+++SWN+M+
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G+ A LFD+M + D ++ ++ +G + + F M IP
Sbjct: 287 YVKAGDVVSARELFDRMV----ERDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IP 337
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ + + + G L + F MP + + W S++ +++ + A F +
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 443 IELEPKNPANFVMLS 457
+L+ + P + S
Sbjct: 397 -QLKGERPDRHTLSS 410
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
IS I +G + +AR LFD +R+ ++WN+++ GY ++ ++F+EMP R++ SWN
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN 104
Query: 216 VLIGGY--ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
++I GY R RF +E +++ D++P D W
Sbjct: 105 LIISGYFSCRGSRF---VEEGRKLF---DIMPQR----------------DCVSW----- 137
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
N +I YAK G ++ A+++F + R+++S N ++NG ++G+ A+
Sbjct: 138 ------------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAV 185
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
F +M + D + G++S GLVR+G L
Sbjct: 186 GFFRKMG----ERDSASLSGLVS-----GLVRNGKL 212
>Medtr4g094402.4 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 290/510 (56%), Gaps = 23/510 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+ MPE N + NA+ NG+ L V F +M +A L+ +V
Sbjct: 150 MDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLV-- 207
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVF-------G 111
+ G + ++ G + + + LI Y +G V +A VF G
Sbjct: 208 ---RNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 264
Query: 112 EMPE------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
E E RNVV W +M+ Y+ GDV S R L D ERD W+ VI GY++ GDM
Sbjct: 265 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 324
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A +LF +MP DV+SWN++++G++ GD+ ++ FE MP +N+ SWN +I GY +N
Sbjct: 325 EEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNE 384
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+ A+E F QM ++G+ P+ TL ++L + L L +GK +H + ++ +
Sbjct: 385 DYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPIN 442
Query: 286 NALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+LI MY++CG I A VFN + +D+I+WN MI G A HG A AL LF++MK +
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKI 502
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
QP +TF+ +L+AC H GLV +G F SM++ Y I P++EH+ + D+LGR G L +A+
Sbjct: 503 QPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAM 562
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP++PD +W +LLGACR H NV++A++A + LI LEP++ A + +L N+Y DLG
Sbjct: 563 DLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLG 622
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+W D R++ M + +K G S I+ +
Sbjct: 623 QWDDAERVRALMEENNVKKQAGYSWIDSTN 652
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 160/304 (52%), Gaps = 21/304 (6%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD---VGSGRRLLD 142
N+ ++I Y + + A ++F EMP R++V W +IS Y SC V GR+L D
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ P+RD V W+ VISGY ++G M A E+F+ MP R+V+S N ++NG+ +GDV S
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLG 261
F +M ER+ S + L+ G RNG+ A E + EGD + L+A + G
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRG 247
Query: 262 ALDMGKWVHVYAESIGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
++ + HV+ + +G N+ N+++ Y K G + SA ++F+ +
Sbjct: 248 MVEEAR--HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE 305
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
RD SWNT+I G G+ +A LF +M PD +++ I+S + +G ++ +
Sbjct: 306 RDACSWNTVIGGYVQIGDMEEASKLFLEMP----IPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 371 FQSM 374
F++M
Sbjct: 362 FENM 365
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 34/375 (9%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + A +F RN V W +MI+ Y+ ++ R+L D P RD+V W+++ISGY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 161 E---SGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
S + R+LFD MP RD +SWNT+++GYA +G + ++FE MPERNV S N +
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-YAESI 276
+ G+ NG A+ F++M G+ + +L ++ R G LDM + V Y
Sbjct: 172 VNGFLLNGDVDSAVGFFRKM---GE--RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 277 GYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD-------------RRDIISWNTMING 322
K ++ + N LI Y + G++E A VF+ + +R+++SWN+M+
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G+ A LFD+M + D ++ ++ +G + + F M IP
Sbjct: 287 YVKAGDVVSARELFDRMV----ERDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IP 337
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ + + + G L + F MP + + W S++ +++ + A F +
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 443 IELEPKNPANFVMLS 457
+L+ + P + S
Sbjct: 397 -QLKGERPDRHTLSS 410
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
IS I +G + +AR LFD +R+ ++WN+++ GY ++ ++F+EMP R++ SWN
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN 104
Query: 216 VLIGGY--ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
++I GY R RF +E +++ D++P D W
Sbjct: 105 LIISGYFSCRGSRF---VEEGRKLF---DIMPQR----------------DCVSW----- 137
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
N +I YAK G ++ A+++F + R+++S N ++NG ++G+ A+
Sbjct: 138 ------------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAV 185
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
F +M + D + G++S GLVR+G L
Sbjct: 186 GFFRKMG----ERDSASLSGLVS-----GLVRNGKL 212
>Medtr4g094402.3 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904066 | 20130731
Length = 654
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 290/510 (56%), Gaps = 23/510 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+ MPE N + NA+ NG+ L V F +M +A L+ +V
Sbjct: 150 MDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLV-- 207
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVF-------G 111
+ G + ++ G + + + LI Y +G V +A VF G
Sbjct: 208 ---RNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 264
Query: 112 EMPE------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
E E RNVV W +M+ Y+ GDV S R L D ERD W+ VI GY++ GDM
Sbjct: 265 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 324
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A +LF +MP DV+SWN++++G++ GD+ ++ FE MP +N+ SWN +I GY +N
Sbjct: 325 EEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNE 384
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+ A+E F QM ++G+ P+ TL ++L + L L +GK +H + ++ +
Sbjct: 385 DYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPIN 442
Query: 286 NALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+LI MY++CG I A VFN + +D+I+WN MI G A HG A AL LF++MK +
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKI 502
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
QP +TF+ +L+AC H GLV +G F SM++ Y I P++EH+ + D+LGR G L +A+
Sbjct: 503 QPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAM 562
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP++PD +W +LLGACR H NV++A++A + LI LEP++ A + +L N+Y DLG
Sbjct: 563 DLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLG 622
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+W D R++ M + +K G S I+ +
Sbjct: 623 QWDDAERVRALMEENNVKKQAGYSWIDSTN 652
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 160/304 (52%), Gaps = 21/304 (6%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD---VGSGRRLLD 142
N+ ++I Y + + A ++F EMP R++V W +IS Y SC V GR+L D
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ P+RD V W+ VISGY ++G M A E+F+ MP R+V+S N ++NG+ +GDV S
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLG 261
F +M ER+ S + L+ G RNG+ A E + EGD + L+A + G
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRG 247
Query: 262 ALDMGKWVHVYAESIGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
++ + HV+ + +G N+ N+++ Y K G + SA ++F+ +
Sbjct: 248 MVEEAR--HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE 305
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
RD SWNT+I G G+ +A LF +M PD +++ I+S + +G ++ +
Sbjct: 306 RDACSWNTVIGGYVQIGDMEEASKLFLEMP----IPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 371 FQSM 374
F++M
Sbjct: 362 FENM 365
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 34/375 (9%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + A +F RN V W +MI+ Y+ ++ R+L D P RD+V W+++ISGY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 161 E---SGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
S + R+LFD MP RD +SWNT+++GYA +G + ++FE MPERNV S N +
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-YAESI 276
+ G+ NG A+ F++M G+ + +L ++ R G LDM + V Y
Sbjct: 172 VNGFLLNGDVDSAVGFFRKM---GE--RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 277 GYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD-------------RRDIISWNTMING 322
K ++ + N LI Y + G++E A VF+ + +R+++SWN+M+
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G+ A LFD+M + D ++ ++ +G + + F M IP
Sbjct: 287 YVKAGDVVSARELFDRMV----ERDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IP 337
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ + + + G L + F MP + + W S++ +++ + A F +
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 443 IELEPKNPANFVMLS 457
+L+ + P + S
Sbjct: 397 -QLKGERPDRHTLSS 410
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
IS I +G + +AR LFD +R+ ++WN+++ GY ++ ++F+EMP R++ SWN
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN 104
Query: 216 VLIGGY--ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
++I GY R RF +E +++ D++P D W
Sbjct: 105 LIISGYFSCRGSRF---VEEGRKLF---DIMPQR----------------DCVSW----- 137
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
N +I YAK G ++ A+++F + R+++S N ++NG ++G+ A+
Sbjct: 138 ------------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAV 185
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
F +M + D + G++S GLVR+G L
Sbjct: 186 GFFRKMG----ERDSASLSGLVS-----GLVRNGKL 212
>Medtr4g094402.2 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900455-37904049 | 20130731
Length = 654
Score = 350 bits (899), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 188/510 (36%), Positives = 290/510 (56%), Gaps = 23/510 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+ MPE N + NA+ NG+ L V F +M +A L+ +V
Sbjct: 150 MDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLV-- 207
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVF-------G 111
+ G + ++ G + + + LI Y +G V +A VF G
Sbjct: 208 ---RNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 264
Query: 112 EMPE------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
E E RNVV W +M+ Y+ GDV S R L D ERD W+ VI GY++ GDM
Sbjct: 265 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 324
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A +LF +MP DV+SWN++++G++ GD+ ++ FE MP +N+ SWN +I GY +N
Sbjct: 325 EEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNE 384
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+ A+E F QM ++G+ P+ TL ++L + L L +GK +H + ++ +
Sbjct: 385 DYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPIN 442
Query: 286 NALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+LI MY++CG I A VFN + +D+I+WN MI G A HG A AL LF++MK +
Sbjct: 443 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKI 502
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
QP +TF+ +L+AC H GLV +G F SM++ Y I P++EH+ + D+LGR G L +A+
Sbjct: 503 QPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAM 562
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP++PD +W +LLGACR H NV++A++A + LI LEP++ A + +L N+Y DLG
Sbjct: 563 DLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLG 622
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+W D R++ M + +K G S I+ +
Sbjct: 623 QWDDAERVRALMEENNVKKQAGYSWIDSTN 652
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/304 (31%), Positives = 160/304 (52%), Gaps = 21/304 (6%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD---VGSGRRLLD 142
N+ ++I Y + + A ++F EMP R++V W +IS Y SC V GR+L D
Sbjct: 68 NTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFD 127
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ P+RD V W+ VISGY ++G M A E+F+ MP R+V+S N ++NG+ +GDV S
Sbjct: 128 IMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGF 187
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLG 261
F +M ER+ S + L+ G RNG+ A E + EGD + L+A + G
Sbjct: 188 FRKMGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRG 247
Query: 262 ALDMGKWVHVYAESIGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
++ + HV+ + +G N+ N+++ Y K G + SA ++F+ +
Sbjct: 248 MVEEAR--HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVE 305
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
RD SWNT+I G G+ +A LF +M PD +++ I+S + +G ++ +
Sbjct: 306 RDACSWNTVIGGYVQIGDMEEASKLFLEMP----IPDVLSWNSIISGFSQIGDLKRVKEF 361
Query: 371 FQSM 374
F++M
Sbjct: 362 FENM 365
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 179/375 (47%), Gaps = 34/375 (9%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI 160
G + A +F RN V W +MI+ Y+ ++ R+L D P RD+V W+++ISGY
Sbjct: 52 GRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYF 111
Query: 161 E---SGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
S + R+LFD MP RD +SWNT+++GYA +G + ++FE MPERNV S N +
Sbjct: 112 SCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAV 171
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-YAESI 276
+ G+ NG A+ F++M G+ + +L ++ R G LDM + V Y
Sbjct: 172 VNGFLLNGDVDSAVGFFRKM---GE--RDSASLSGLVSGLVRNGKLDMAAEILVEYGNEG 226
Query: 277 GYKGNM-FVGNALIDMYAKCGVIESAVDVFNCLD-------------RRDIISWNTMING 322
K ++ + N LI Y + G++E A VF+ + +R+++SWN+M+
Sbjct: 227 DEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMC 286
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G+ A LFD+M + D ++ ++ +G + + F M IP
Sbjct: 287 YVKAGDVVSARELFDRMV----ERDACSWNTVIGGYVQIGDMEEASKLFLEMP-----IP 337
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ + + + G L + F MP + + W S++ +++ + A F +
Sbjct: 338 DVLSWNSIISGFSQIGDLKRVKEFFENMP-HKNLISWNSVIAGYEKNEDYKGAIELFSQM 396
Query: 443 IELEPKNPANFVMLS 457
+L+ + P + S
Sbjct: 397 -QLKGERPDRHTLSS 410
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
IS I +G + +AR LFD +R+ ++WN+++ GY ++ ++F+EMP R++ SWN
Sbjct: 45 ISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWN 104
Query: 216 VLIGGY--ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
++I GY R RF +E +++ D++P D W
Sbjct: 105 LIISGYFSCRGSRF---VEEGRKLF---DIMPQR----------------DCVSW----- 137
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
N +I YAK G ++ A+++F + R+++S N ++NG ++G+ A+
Sbjct: 138 ------------NTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAV 185
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
F +M + D + G++S GLVR+G L
Sbjct: 186 GFFRKMG----ERDSASLSGLVS-----GLVRNGKL 212
>Medtr7g023780.1 | editing factor 22 | HC | chr7:7790817-7787040 |
20130731
Length = 719
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/546 (34%), Positives = 302/546 (55%), Gaps = 20/546 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FD+ P+P+ WNA+ YS +R+V+ ++ M P + FT P V+++C
Sbjct: 97 YARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRWMKWVGLHP-DKFTFPCVLKAC 155
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S+ VH GF + F+ L+ +Y+ G +G A VF + +R +V WT
Sbjct: 156 SELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCGRIGMARMVFDRLYDRTIVSWT 215
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSAREL------- 171
A++S Y G+ R+ D + DV + V+ Y + D+ R L
Sbjct: 216 AIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMRAYTDVDDLEQGRSLHGCIIKM 275
Query: 172 -FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERN-VYSWNVLIGGYARNGRFSD 229
++ P+ + +L YA G+V + F++M N V WN +I GYA+NG +
Sbjct: 276 GLEEEPDLLI----SLTAFYAKCGEVTVAKSFFDKMKTPNKVMMWNAMISGYAKNGHAEE 331
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+E F Q ++ ++ P+ TL + +LAC+++G+L + +W+ Y Y G++FV LI
Sbjct: 332 AVELF-QAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYVRKSKYGGDIFVNTTLI 390
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG +ESA VF+ +D++ W+ MI G +HG +A+ L+ MK P+ V
Sbjct: 391 DMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAIYLYHAMKQEGVCPNDV 450
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+G+L+AC+H GL++ G+ F M D + I P+ EHY C+ DLLGRAG L QA F+ K
Sbjct: 451 TFIGLLTACSHSGLIKQGWELFHCMRD-FGIKPRNEHYSCVVDLLGRAGYLKQAYVFILK 509
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP+EP +W +LL AC+ H+ V + E A Q L L+P N ++V LSN+Y W V
Sbjct: 510 MPIEPGVSVWGALLSACKIHRCVTLGEYAAQKLFSLDPYNTGHYVQLSNLYASSRMWDRV 569
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
A +++ M++ G K G SVI+ N+ + F++ D HP+ + I+ L+ L+ G+V
Sbjct: 570 AYIRVLMKEKGLTKYLGYSVIDINEKLHTFHAGDMSHPQAKEIFYELQRQERRLKEVGFV 629
Query: 530 PNLVDV 535
P+ V
Sbjct: 630 PHTESV 635
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 157/326 (48%), Gaps = 10/326 (3%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
NR +M+ L+N +N G + K+F+E P+ +++ WN +I Y+RN + + +E ++
Sbjct: 78 NRFLMT--KLVNQSSNLGQIFYARKLFDEFPDPDLFMWNAIIRTYSRNNMYRNVIEMYRW 135
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M G + P+ FT VL ACS L + VH + G+ ++FV N L+ +YAKCG
Sbjct: 136 MKWVG-LHPDKFTFPCVLKACSELLDFGLSCLVHAHVIVYGFGSHVFVQNGLVALYAKCG 194
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
I A VF+ L R I+SW +++G +G +AL +FDQM+ + +PD ++ V ++
Sbjct: 195 RIGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKPDWISLVSVMR 254
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
A T + + G + + + + + + G + A SF KM
Sbjct: 255 AYTDVDDLEQG-RSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKV 313
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
++W +++ + + E A FQ +I K P + + S + V LK+A
Sbjct: 314 MMWNAMISGYAKNGHAEEAVELFQAMISRNIK-PDSITLRSAVLA----CAQVGSLKLAQ 368
Query: 477 -RDTGFRKLPGCSVIECNDSVVEFYS 501
D RK I N ++++ Y+
Sbjct: 369 WMDDYVRKSKYGGDIFVNTTLIDMYA 394
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 147/336 (43%), Gaps = 12/336 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR VFD++ + +W A+ +GY + + +F +M + P + +L V+R
Sbjct: 196 IGMARMVFDRLYDRTIVSWTAIVSGYGQNGEPWEALRMFDQMRKTDVKP-DWISLVSVMR 254
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN-VV 119
+ + + +G +H K G + L +L Y+ G V A F +M N V+
Sbjct: 255 AYTDVDDLEQGRSLHGCIIKMGLEEEPDLLISLTAFYAKCGEVTVAKSFFDKMKTPNKVM 314
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+W AMIS Y G L R++ SI + + + V + +L M +
Sbjct: 315 MWNAMISGYAKNGHAEEAVELFQAMISRNIKPDSITLRSAVLACAQVGSLKLAQWMDDYV 374
Query: 179 -------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D+ TL++ YA G V S VF+ ++V W+ +I GY +G+ +A+
Sbjct: 375 RKSKYGGDIFVNTTLIDMYAKCGSVESARLVFDRASVKDVVMWSAMIMGYGLHGQGWEAI 434
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ M EG V PND T + +L ACS G + G + G K + ++D+
Sbjct: 435 YLYHAMKQEG-VCPNDVTFIGLLTACSHSGLIKQGWELFHCMRDFGIKPRNEHYSCVVDL 493
Query: 292 YAKCGVIESA-VDVFNCLDRRDIISWNTMINGLAMH 326
+ G ++ A V + + W +++ +H
Sbjct: 494 LGRAGYLKQAYVFILKMPIEPGVSVWGALLSACKIH 529
>Medtr1g073300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:32525227-32527614 | 20130731
Length = 795
Score = 350 bits (898), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/549 (36%), Positives = 293/549 (53%), Gaps = 59/549 (10%)
Query: 1 MGHARKVFDKMPEPNT--ATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
M ARKVFD+ P+ +W M GY + D+V AA L+ T PI
Sbjct: 200 MASARKVFDETPKNQIYEPSWTTMIAGYVRND---DLV--------AARELLDGLTYPID 248
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP---- 114
V WN A+I Y +G +A+ F M
Sbjct: 249 V------------------------AWN-----AMISGYVRRGLYEEAFDTFRRMHSMGI 279
Query: 115 ERNVVVWTAMISAYISC----GDVGSGRRLLD------LAPERDVVMW--SIVISGYIES 162
+ + +T++ISA SC G GR++ + P V+ + +I+ Y +
Sbjct: 280 QEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALITFYTKY 339
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
M+ AR +FDKMP RD++SWN +L+GY N+ + +F EMPERNV +W V+I G A
Sbjct: 340 DRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTVMISGLA 399
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
+NG + L+ F QM EG + P D+ + ACS LG+LD G+ +H +G+ +
Sbjct: 400 QNGFGEEGLKLFNQMKSEG-LEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLGHDSGL 458
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
GNALI MY++CGV+ESA VF + D +SWN MI LA HG+ A+ LF+QM
Sbjct: 459 SAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAALAQHGHGVKAIELFEQMMKE 518
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
PD +TF+ IL+AC H GL+++G YF +M Y I P +HY + DLL RAG+ +
Sbjct: 519 DILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLCRAGMFLK 578
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
A S ++ MP E A IW +LL CR H N+E+ A L+EL P +++LSN+Y
Sbjct: 579 AQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYIILSNMYAA 638
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
LG+W +VAR+++ MR+ G +K PGCS +E + V F D RHPE +++Y L+ L
Sbjct: 639 LGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTYLQQLVNE 698
Query: 523 LRLHGYVPN 531
++ GYVP+
Sbjct: 699 MKKLGYVPD 707
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 201/495 (40%), Gaps = 127/495 (25%)
Query: 74 VHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
VH GFK N+F+ LI +Y ++ A K+F ++P+ ++V T ++SAY S G+
Sbjct: 27 VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYSSSGN 86
Query: 134 VGSGRRLLDLAPE--RDVVMWSIVISGYIESGDMVSARELFDKMPN----------RDVM 181
V ++L + P RD V ++ +I+ Y D +A LF +M V+
Sbjct: 87 VKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTFSSVL 146
Query: 182 S------------------------------WNTLLNGYA---------NSGDVGSFEKV 202
S N LL+ Y +S + S KV
Sbjct: 147 SALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMASARKV 206
Query: 203 FEEMPERNVY---------------------------------SWNVLIGGYARNGRFSD 229
F+E P+ +Y +WN +I GY R G + +
Sbjct: 207 FDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRRGLYEE 266
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLAC----SRLGALDMGKWVHVYA-ESIGYKGNMF- 283
A + F++M G + +++T +++ AC ++G + G+ VH Y ++ + F
Sbjct: 267 AFDTFRRMHSMG-IQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFV 325
Query: 284 --VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN------------------------ 317
V NALI Y K + A VF+ + RDIISWN
Sbjct: 326 LSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPE 385
Query: 318 -------TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
MI+GLA +G + L LF+QMK+ +P F G ++AC+ +G + +G
Sbjct: 386 RNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNG-QQ 444
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
S V + + + R G+++ A S MP D+V W +++ A H
Sbjct: 445 IHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPY-VDSVSWNAMIAALAQHG 503
Query: 431 N-VEIAELAFQHLIE 444
+ V+ EL Q + E
Sbjct: 504 HGVKAIELFEQMMKE 518
>Medtr2g094430.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:40268645-40272453 | 20130731
Length = 678
Score = 350 bits (897), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 197/534 (36%), Positives = 293/534 (54%), Gaps = 11/534 (2%)
Query: 7 VFDKMP-EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
VF K P NT +N M G + + V L+A M++AA P + FT V+++C++
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVP-DSFTFSFVLKACARL 117
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
G +H + K GF + F+ T ++ YS G + DA+KVF +M +NVV WT MI
Sbjct: 118 NLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMI 177
Query: 126 SAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----N 177
I G V R LL+ D + V+ GD+ S R + M +
Sbjct: 178 CGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS 237
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
R+V +L++ Y G + VF+ M E+++ W+ +I GYA NG +A+E F +M
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ +V P+ + +V L +C+ LGAL++G W + N +G +LID YAKCG
Sbjct: 298 R-KVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGS 356
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+E A+ V+ + +D + +N +I+GLAM+G A +F QM P+ TFVG+L
Sbjct: 357 MEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCG 416
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
CTH GLV DG YF SM +S+ P IEHYGCM DLL RAG LD+A + ++ MPM+ + +
Sbjct: 417 CTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVI 476
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+W SLLG CR H+ ++AE + LIELEP N ++V+LSNIY RW + +++ +
Sbjct: 477 VWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVN 536
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ G +KLPG S +E + V EF D HP ++ IY L L L+ GY P
Sbjct: 537 EKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPT 590
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 14/347 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD M N +W M G R+ V LF + + P + F + V+R+C+
Sbjct: 158 AWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRP-DGFVIVRVLRACA 216
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G + G + + G N F+ T+L++MY+ GS+ +A VF M E+++V W+A
Sbjct: 217 RLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSA 276
Query: 124 MISAYISCG------DVGSGRRLLDLAPERDVV---MWSIVISGYIESGDMVSARELFDK 174
MI Y S G ++ R +++ P+ + + S G +E G+ +++
Sbjct: 277 MIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEE 336
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ V+ +L++ YA G + V++ M E++ +N +I G A G+ A F
Sbjct: 337 FLSNPVLG-TSLIDFYAKCGSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVF 395
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYA 293
QM G + PN+ T V +L C+ G +D G+ + + + + ++D+ A
Sbjct: 396 GQMGKFG-IPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLA 454
Query: 294 KCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQM 339
+ G ++ A ++ + + ++I W +++ G +H T A + Q+
Sbjct: 455 RAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQL 501
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 15/250 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR VFD M E + W+AM GY+ R+ + LF EM + P + + + +
Sbjct: 256 MEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRP-DCYAMVGALS 314
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ GA+ G + F N L T+LI+ Y+ GS+ +A V+ M E++ VV
Sbjct: 315 SCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKDRVV 374
Query: 121 WTAMISAYISCGDVGSGRRL------LDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+ A+IS G VG+ + + P + ++ G +G + R F+
Sbjct: 375 FNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVG--LLCGCTHAGLVDDGRHYFNS 432
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFS 228
M + + + +++ A +G + + + MP + NV W L+GG +
Sbjct: 433 MSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQ 492
Query: 229 DALEAFKQML 238
A KQ++
Sbjct: 493 LAEHVLKQLI 502
>Medtr4g094402.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:37900570-37903619 | 20130731
Length = 662
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 188/509 (36%), Positives = 289/509 (56%), Gaps = 24/509 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F+ MPE N + NA+ NG+ L V F +M +A L+ +V
Sbjct: 76 MDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGERDSASLSGLVSGLV-- 133
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVF-------G 111
+ G + ++ G + + + LI Y +G V +A VF G
Sbjct: 134 ---RNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQG 190
Query: 112 EMPE------RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDM 165
E E RNVV W +M+ Y+ GDV S R L D ERD W+ VI GY++ GDM
Sbjct: 191 EGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDM 250
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
A +LF +MP DV+SWN++++G++ GD+ ++ FE MP +N+ SWN +I GY +N
Sbjct: 251 EEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMPHKNLISWNSVIAGYEKNE 310
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+ A+E F QM ++G+ P+ TL ++L + L L +GK +H + ++ +
Sbjct: 311 DYKGAIELFSQMQLKGER-PDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVP-DLPIN 368
Query: 286 NALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+LI MY++CG I A VFN + +D+I+WN MI G A HG A AL LF++MK +
Sbjct: 369 NSLITMYSRCGEIGDARHVFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKI 428
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
QP +TF+ +L+AC H GLV +G F SM++ Y I P++EH+ + D+LGR G L +A+
Sbjct: 429 QPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFASLVDILGRQGQLQEAM 488
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP++PD +W +LLGACR H NV++A++A + LI LEP++ A + +L N+Y DLG
Sbjct: 489 DLIVNMPVKPDKAVWGALLGACRVHSNVDLAQVAAKALIRLEPESSAPYALLFNLYADLG 548
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECN 493
+W D R++ M + +K G S+ C
Sbjct: 549 QWDDAERVRALMEENNVKKQAG-SICRCQ 576
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 157/297 (52%), Gaps = 21/297 (7%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD---VGSGRRLLDLAPERDV 149
+I Y + + A ++F EMP R++V W +IS Y SC V GR+L D+ P+RD
Sbjct: 1 MITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDC 60
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER 209
V W+ VISGY ++G M A E+F+ MP R+V+S N ++NG+ +GDV S F +M ER
Sbjct: 61 VSWNTVISGYAKNGRMDQAIEIFESMPERNVVSCNAVVNGFLLNGDVDSAVGFFRKMGER 120
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC-SRLGALDMGKW 268
+ S + L+ G RNG+ A E + EGD + L+A + G ++ +
Sbjct: 121 DSASLSGLVSGLVRNGKLDMAAEILVEYGNEGDEKDDLVYAYNTLIAGYGQRGMVEEAR- 179
Query: 269 VHVYAESIGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
HV+ + +G N+ N+++ Y K G + SA ++F+ + RD SWN
Sbjct: 180 -HVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRMVERDACSWN 238
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
T+I G G+ +A LF +M PD +++ I+S + +G ++ +F++M
Sbjct: 239 TVIGGYVQIGDMEEASKLFLEMP----IPDVLSWNSIISGFSQIGDLKRVKEFFENM 291
>Medtr1g059810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:26032045-26029503 | 20130731
Length = 633
Score = 348 bits (894), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 195/544 (35%), Positives = 293/544 (53%), Gaps = 21/544 (3%)
Query: 3 HARKVFDKMPEPN------TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP 56
H R P P T WN S + + ++ M R++ P N FT P
Sbjct: 5 HHRHSTSSPPVPGESKQNPTTAWNCYLRELSKQRKFMEALTVYRHMLRSSFFP-NTFTFP 63
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
++++SC+ G Q+H K G + + + ++LI MYS A KVF E P
Sbjct: 64 VLLKSCALLSLPFTGSQLHSHILKTGSQPDPYTHSSLINMYSKTSLPCLARKVFDESPVN 123
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLD-LAPERDVVMWSIVISGYIESGDMVSARE----- 170
+ + AMIS Y + + +L + E + S+ + G + SG +V +
Sbjct: 124 LTISYNAMISGYTNNMMIVEAIKLFRRMLCENRFFVNSVTMLGLV-SGILVPEKLRLGFC 182
Query: 171 ----LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
F D+ N+ L Y G+V KVF+E+ +++ +WN +I GYA+NG
Sbjct: 183 LHGCCFKFGFENDLSVGNSFLTMYVKCGEVEYGRKVFDEILVKDLITWNAMISGYAQNGH 242
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
LE +++M G V P+ TL+ VL +C+ LGA +G+ V + G++ N F+ N
Sbjct: 243 ARRVLEIYREMRKVGGVNPDPVTLLGVLCSCANLGAQGIGREVEKEIDRFGFRSNSFLMN 302
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRD--IISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
ALI+MYA+CG + A +VF+C+D R ++SW +I G +HG A+ LFD M S
Sbjct: 303 ALINMYARCGNLVRAREVFDCMDERSKSVVSWTAIIGGYGIHGEGETAVELFDVMVRSGV 362
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+PD FV +LSAC+H GL G YF M Y + P EHY C+ DLLGR+G L +A+
Sbjct: 363 KPDRTVFVSVLSACSHAGLTEKGLEYFDEMERKYGLQPGPEHYSCLVDLLGRSGRLKEAM 422
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ M ++PD +W +LLGAC+ H+NVE+AE+AFQH+IELEP N +V+LSN+Y D
Sbjct: 423 DLIDLMKVKPDGPVWGALLGACKIHRNVELAEVAFQHVIELEPTNIGYYVLLSNLYSDTK 482
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
+ V ++++ MRD RK PGCS +E + FYS D HP+++ IYR L L L++
Sbjct: 483 NLEGVLKVRVMMRDRNLRKDPGCSYVEYKGKMHLFYSGDTSHPQSKEIYRMLNELENLVK 542
Query: 525 -LHG 527
+HG
Sbjct: 543 DIHG 546
>Medtr7g076707.1 | PPR containing plant-like protein | HC |
chr7:28928185-28925455 | 20130731
Length = 569
Score = 348 bits (893), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 185/535 (34%), Positives = 300/535 (56%), Gaps = 50/535 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLT----ESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
A ++F ++P P + WN M G+S T E+ R+ +++++ A N+ T P ++
Sbjct: 30 ANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQ-----ALFGNNLTYPFLL 84
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C++ V VH K GF + F+ ALI Y+ +G A KVF EM ER++V
Sbjct: 85 KACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLV 143
Query: 120 VWTAMISAYISC-----------------------------------GDVGSGRRLLDLA 144
W ++I Y C G+ G +++
Sbjct: 144 SWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYI 203
Query: 145 PER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
E DV + + +I Y + AR +FD+M +R+++SWN ++ GY +G++ +
Sbjct: 204 EENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAAR 263
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
K+F++MP R+V SW +I Y++ G+F A+ F++M+V V P++ T+ +VL AC+ +
Sbjct: 264 KLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVT-KVKPDEITVASVLSACAHI 322
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
GALD+G+ VH Y +++VGNALIDMY KCG +E + VF + +RD +SW ++I
Sbjct: 323 GALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVI 382
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
GLA++G+ AL+LF M +P TFVG+L AC H G+V G YF+SM Y +
Sbjct: 383 AGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGL 442
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
P+++HYGC+ DLL R+G L +A F+++MPM+PD V+W LL A + H N+ +AE+A +
Sbjct: 443 TPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHGNLHLAEIATK 502
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
L+E +P N N+++ SN Y RW+DV +++ M ++ K S +E NDS
Sbjct: 503 KLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNVHKPSASSSVEINDS 557
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 168/369 (45%), Gaps = 43/369 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G ARKVFD+M E + +WN++ GY + +V+V+F EM R A + T+ VV
Sbjct: 127 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEM-RMADVKGDAVTMVKVVL 185
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G + + + + + +L LI+MY + V A +VF M +RN+V
Sbjct: 186 ACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVS 245
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
W AMI Y G++ + R+L D P RDV+ W+ +IS Y ++G A LF +M
Sbjct: 246 WNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV 305
Query: 176 ----------------------------------PNRDVMSWNTLLNGYANSGDVGSFEK 201
N D+ N L++ Y G V
Sbjct: 306 KPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLS 365
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VFEEM +R+ SW +I G A NG AL F ML EG V P T V VLLAC+ G
Sbjct: 366 VFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREG-VRPTHGTFVGVLLACAHAG 424
Query: 262 ALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTM 319
+D G ++ G M ++D+ ++ G + A + + D++ W +
Sbjct: 425 VVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRIL 484
Query: 320 INGLAMHGN 328
++ +HGN
Sbjct: 485 LSASQVHGN 493
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 137/301 (45%), Gaps = 34/301 (11%)
Query: 179 DVMSWNTLLNGYANS-GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
D +S LL YA S ++ ++F ++P + WN++I G+++ + +A+ + M
Sbjct: 9 DPISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLM 68
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ + N+ T +L AC+R+ + VH +G+ ++FV NALI YA
Sbjct: 69 YSQA-LFGNNLTYPFLLKACARISNVSCTT-VHARVLKLGFDSDLFVSNALIHGYAGFCE 126
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
+ A VF+ + RD++SWN++I G ++ L +F++M+ + + D VT V ++ A
Sbjct: 127 LGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLA 186
Query: 358 CTHMGL--VRDGFLYF----QSMVDHYSIIPQIEHYG--CMADL---------------- 393
CT +G V D + + + VD Y I+ YG M DL
Sbjct: 187 CTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSW 246
Query: 394 ------LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
G+AG L A MP D + WTS++ + A FQ ++ +
Sbjct: 247 NAMIMGYGKAGNLVAARKLFDDMP-HRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV 305
Query: 448 K 448
K
Sbjct: 306 K 306
>Medtr1g014340.1 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 286/527 (54%), Gaps = 13/527 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+MP+ + A WN + + Y + + + F M R P + T+ + SC+
Sbjct: 160 AVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEP-DSVTITTAISSCA 218
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G ++H GF+ +SF+ AL++MY G + A +VF +MP + VV W +
Sbjct: 219 RLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNS 278
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDK 174
MI+ Y GD S +L V + + S + G V + ++
Sbjct: 279 MINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR 338
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ D+ ++L++ Y G V S E +F+ MP+ SWNV+I GY G+ DAL F
Sbjct: 339 I-QPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLF 397
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M + V P+ T +VL ACS+L AL+ G+ +H N V AL+DMYAK
Sbjct: 398 GEM-SKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAK 456
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E A VF CL RD++SW +MI HG +AL LF +M S +PD VTF+ I
Sbjct: 457 CGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAI 516
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP-ME 413
LSAC+H GLV DG +F M++ Y IIP+IEHY C+ LLGRAG L +A ++ P +
Sbjct: 517 LSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEIS 576
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
D + ++L ACR HKN+++ ++LI+ +P + + +++LSN+Y G+W +V ++
Sbjct: 577 DDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVR 636
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
M+D G +K PGCS IE N+ +V F+ D H E I L LT
Sbjct: 637 SKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLT 683
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 221/482 (45%), Gaps = 74/482 (15%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A+ VFD + P + N + GY+ + + + LF ++ + +T P V+++
Sbjct: 56 YAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKA 115
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C V G+ +H K G + + ++L+ MY+ A K+F EMP+++V W
Sbjct: 116 CGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACW 175
Query: 122 TAMISAYISCGD--------------------------VGSGRRLLDLAPERDV------ 149
+IS Y G + S RLLDL R++
Sbjct: 176 NTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVN 235
Query: 150 -------VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ + ++ Y + G + A E+F++MPN+ V++WN+++NGY GD S
Sbjct: 236 SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGIS---- 291
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
++ FK+M EG V P TL + L+ACS+
Sbjct: 292 ---------------------------CIQLFKRMYSEG-VKPTLTTLTSTLMACSQSAQ 323
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L GK+VH Y + ++F+ ++L+D+Y KCG +ESA +F + + +SWN MI+G
Sbjct: 324 LLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISG 383
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G DAL LF +M S +PD +TF +L+AC+ + + G +++ ++
Sbjct: 384 YVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG-REIHNLIVERNLGN 442
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
G + D+ + G +++A + +P E D V WTS++ A +H V A F +
Sbjct: 443 NEVVMGALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSHGRVYEALELFAEM 501
Query: 443 IE 444
++
Sbjct: 502 LQ 503
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 70/425 (16%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
++R+ + ++++G+ +H G + + ++C LI +Y + A VF +
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLD-------LAPE--------------RDVVMWSIV 155
+ + +++ Y L D L P+ R VV+ ++
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+ ++ G MV D++ ++L+ YA + K+F+EMP+++V WN
Sbjct: 129 HTCLVKEGLMV------------DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWN 176
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I Y ++G+F +AL F M G P+ T+ + +C+RL LD G+ +H +
Sbjct: 177 TVISCYYQSGKFEEALRYFGMMRRFG-FEPDSVTITTAISSCARLLDLDRGREIHKELVN 235
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
G++ + FV AL+DMY KCG +E A++VF + + +++WN+MING G+ + L
Sbjct: 236 SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQL 295
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
F +M + +P T L AC+ + +G + + I P I + DL
Sbjct: 296 FKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG-KFVHGYIIRNRIQPDIFLNSSLMDLYF 354
Query: 396 RAGLLDQAVSFVRKMP----------------------------------MEPDAVIWTS 421
+ G ++ A + + MP +EPDA+ +TS
Sbjct: 355 KCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTS 414
Query: 422 LLGAC 426
+L AC
Sbjct: 415 VLAAC 419
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 35/212 (16%)
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
L+ +L A +L GK +H ++G + +++V LI +Y C + + A +VF+ ++
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 310 RRDIISW-NTMINGLAMHGNTADALSLFDQ-MKNSREQPDGVTFVGILSAC--------- 358
IS N ++ G + +AL LFD+ M +PD T+ +L AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 359 --THMGLVRDGFLY-----------------FQSMVDHYSIIP--QIEHYGCMADLLGRA 397
H LV++G + F+ V + +P + + + ++
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 398 GLLDQAVSF---VRKMPMEPDAVIWTSLLGAC 426
G ++A+ + +R+ EPD+V T+ + +C
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSC 217
>Medtr1g014340.2 | PPR containing plant-like protein | HC |
chr1:3000992-3003085 | 20130731
Length = 697
Score = 344 bits (883), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 188/527 (35%), Positives = 286/527 (54%), Gaps = 13/527 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+MP+ + A WN + + Y + + + F M R P + T+ + SC+
Sbjct: 160 AVKLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEP-DSVTITTAISSCA 218
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G ++H GF+ +SF+ AL++MY G + A +VF +MP + VV W +
Sbjct: 219 RLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNS 278
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDK 174
MI+ Y GD S +L V + + S + G V + ++
Sbjct: 279 MINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNR 338
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ D+ ++L++ Y G V S E +F+ MP+ SWNV+I GY G+ DAL F
Sbjct: 339 I-QPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLF 397
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M + V P+ T +VL ACS+L AL+ G+ +H N V AL+DMYAK
Sbjct: 398 GEM-SKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAK 456
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E A VF CL RD++SW +MI HG +AL LF +M S +PD VTF+ I
Sbjct: 457 CGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAI 516
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP-ME 413
LSAC+H GLV DG +F M++ Y IIP+IEHY C+ LLGRAG L +A ++ P +
Sbjct: 517 LSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEIS 576
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
D + ++L ACR HKN+++ ++LI+ +P + + +++LSN+Y G+W +V ++
Sbjct: 577 DDFQLLSTLFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVR 636
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
M+D G +K PGCS IE N+ +V F+ D H E I L LT
Sbjct: 637 SKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLT 683
Score = 179 bits (453), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 221/482 (45%), Gaps = 74/482 (15%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A+ VFD + P + N + GY+ + + + LF ++ + +T P V+++
Sbjct: 56 YAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKA 115
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C V G+ +H K G + + ++L+ MY+ A K+F EMP+++V W
Sbjct: 116 CGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACW 175
Query: 122 TAMISAYISCGD--------------------------VGSGRRLLDLAPERDV------ 149
+IS Y G + S RLLDL R++
Sbjct: 176 NTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVN 235
Query: 150 -------VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ + ++ Y + G + A E+F++MPN+ V++WN+++NGY GD S
Sbjct: 236 SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGIS---- 291
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
++ FK+M EG V P TL + L+ACS+
Sbjct: 292 ---------------------------CIQLFKRMYSEG-VKPTLTTLTSTLMACSQSAQ 323
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L GK+VH Y + ++F+ ++L+D+Y KCG +ESA +F + + +SWN MI+G
Sbjct: 324 LLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISG 383
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
G DAL LF +M S +PD +TF +L+AC+ + + G +++ ++
Sbjct: 384 YVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG-REIHNLIVERNLGN 442
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
G + D+ + G +++A + +P E D V WTS++ A +H V A F +
Sbjct: 443 NEVVMGALLDMYAKCGAVEEAFGVFKCLP-ERDLVSWTSMITAYGSHGRVYEALELFAEM 501
Query: 443 IE 444
++
Sbjct: 502 LQ 503
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 70/425 (16%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
++R+ + ++++G+ +H G + + ++C LI +Y + A VF +
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLD-------LAPE--------------RDVVMWSIV 155
+ + +++ Y L D L P+ R VV+ ++
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+ ++ G MV D++ ++L+ YA + K+F+EMP+++V WN
Sbjct: 129 HTCLVKEGLMV------------DIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWN 176
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I Y ++G+F +AL F M G P+ T+ + +C+RL LD G+ +H +
Sbjct: 177 TVISCYYQSGKFEEALRYFGMMRRFG-FEPDSVTITTAISSCARLLDLDRGREIHKELVN 235
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
G++ + FV AL+DMY KCG +E A++VF + + +++WN+MING G+ + L
Sbjct: 236 SGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQL 295
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
F +M + +P T L AC+ + +G + + I P I + DL
Sbjct: 296 FKRMYSEGVKPTLTTLTSTLMACSQSAQLLEG-KFVHGYIIRNRIQPDIFLNSSLMDLYF 354
Query: 396 RAGLLDQAVSFVRKMP----------------------------------MEPDAVIWTS 421
+ G ++ A + + MP +EPDA+ +TS
Sbjct: 355 KCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTS 414
Query: 422 LLGAC 426
+L AC
Sbjct: 415 VLAAC 419
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 35/212 (16%)
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
L+ +L A +L GK +H ++G + +++V LI +Y C + + A +VF+ ++
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIE 65
Query: 310 RRDIISW-NTMINGLAMHGNTADALSLFDQ-MKNSREQPDGVTFVGILSAC--------- 358
IS N ++ G + +AL LFD+ M +PD T+ +L AC
Sbjct: 66 NPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLG 125
Query: 359 --THMGLVRDGFLY-----------------FQSMVDHYSIIP--QIEHYGCMADLLGRA 397
H LV++G + F+ V + +P + + + ++
Sbjct: 126 QMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQS 185
Query: 398 GLLDQAVSF---VRKMPMEPDAVIWTSLLGAC 426
G ++A+ + +R+ EPD+V T+ + +C
Sbjct: 186 GKFEEALRYFGMMRRFGFEPDSVTITTAISSC 217
>Medtr7g076020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28566228-28568873 | 20130731
Length = 808
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/532 (36%), Positives = 292/532 (54%), Gaps = 13/532 (2%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
FD+ N W AM GY+ V F M+ A N +T P ++ +CS A
Sbjct: 196 FDR---KNHVLWTAMVTGYAQNGDGYKAVEFFRYMH-AQGVECNQYTFPTILTACSSVLA 251
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
GEQVH K GF N ++ +AL++MY+ G + +A + M + +VV W +++
Sbjct: 252 RCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVG 311
Query: 128 YISCGDVGSGRRLLDLAPER-----DVVMWSIVISGYIESGDMVSARELFDK--MPNRDV 180
++ G RL R D S++ + S + S L K N +
Sbjct: 312 FVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKSVHGLIIKTGFENYKL 371
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+S N L++ YA +GD+ VFE+M E++V SW L+ GYA+N ++L+ F M V
Sbjct: 372 VS-NALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVT 430
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
G V P+ F + ++L AC+ L L+ GK VH+ G + + V N+L+ MYAKCG ++
Sbjct: 431 G-VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDD 489
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A +F + +D+I+W +I G A +G ++L +D M +S +PD +TF+G+L AC+H
Sbjct: 490 ADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSH 549
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
GLV +G YFQ M Y I P EHY CM DL GR+G LD+A + +M ++PDA +W
Sbjct: 550 AGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWK 609
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
SLL ACR H+N+E+AE A +L ELEP N +VMLSN+Y +W DVA+++ M+ G
Sbjct: 610 SLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKG 669
Query: 481 FRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
K PGCS +E N V F S D HP IY + + + ++ GYVP++
Sbjct: 670 IVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPDM 721
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 213/472 (45%), Gaps = 69/472 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGY----SLTESHR-------------------------- 33
ARK+FDKMP+ + +WN M + Y L E+
Sbjct: 55 ARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCK 114
Query: 34 -DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTA 92
+ LF M R + FTL V+R CS G ++ GE +H K GF+ N F+ T
Sbjct: 115 VEAFDLFRSM-RLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTG 173
Query: 93 LIEMYSAKGSVGDAYKVFG--EMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
L++MY+ V +A +F E +N V+WTAM++ Y GD + V
Sbjct: 174 LVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVE 233
Query: 151 MWSIVISGYIESGDMVSARELFDKMP--------NRDVMSWNTLLNGYANSGDVGSFEKV 202
+ + V AR +++ +V + L++ YA GD+ + + +
Sbjct: 234 CNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNM 293
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
E M + +V SWN L+ G+ R+G +AL FK M ++ +D+T +V L C +G+
Sbjct: 294 LETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGR-NMKIDDYTFPSV-LNCCVVGS 351
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
++ K VH G++ V NAL+DMYAK G ++ A VF + +D+ISW +++ G
Sbjct: 352 IN-PKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTG 410
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDGFLYF 371
A + + ++L +F M+ + PD ILSAC H+ ++ G +
Sbjct: 411 YAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWS 470
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
QS+ Y + + + G LD A + M ++ D + WT+++
Sbjct: 471 QSV------------YNSLVAMYAKCGCLDDADAIFVSMQVK-DVITWTAII 509
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 189/415 (45%), Gaps = 65/415 (15%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMW 152
L+ S G V DA K+F +MP+++ W MIS+Y++ G + R L D + + W
Sbjct: 42 LLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITW 101
Query: 153 SIVISGYIESGDMVSARELFDKMP------------------------------------ 176
S +ISGY + G V A +LF M
Sbjct: 102 SSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVK 161
Query: 177 ---NRDVMSWNTLLNGYANSGDVGSFEKVFE--EMPERNVYSWNVLIGGYARNGRFSDAL 231
+V L++ YA V E +F+ E +N W ++ GYA+NG A+
Sbjct: 162 NGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAV 221
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
E F+ M +G V N +T +L ACS + A G+ VH + G+ N++V +AL+DM
Sbjct: 222 EFFRYMHAQG-VECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDM 280
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YAKCG +++A ++ ++ D++SWN+++ G HG +AL LF M + D TF
Sbjct: 281 YAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTF 340
Query: 352 VGILSAC---------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
+L+ C H +++ GF ++Y ++ + D+ + G +D
Sbjct: 341 PSVLNCCVVGSINPKSVHGLIIKTGF-------ENYKLVSN-----ALVDMYAKTGDMDC 388
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
A + KM +E D + WTSL+ + + E + F + + NP F++ S
Sbjct: 389 AYTVFEKM-LEKDVISWTSLVTGYAQNNSHEESLKIFCDM-RVTGVNPDQFIVAS 441
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 41/264 (15%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A VF+KM E + +W ++ GY+ SH + + +F +M P + F + ++
Sbjct: 386 MDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNP-DQFIVASILS 444
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G+QVH K G +W+ + +L+ MY+ G + DA +F M ++V+
Sbjct: 445 ACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVIT 504
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WTA+I Y G GR L ++V SG D
Sbjct: 505 WTAIIVGY---AQNGKGRNSLKFYD-------AMVSSG-----------------TRPDF 537
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS-------WNVLIGGYARNGRFSDALEA 233
+++ LL +++G V K F++M VY + +I + R+G+ +A
Sbjct: 538 ITFIGLLFACSHAGLVDEGRKYFQQM--NKVYGIKPGPEHYACMIDLFGRSGKLDEA--- 592
Query: 234 FKQMLVEGDVVPNDFTLVAVLLAC 257
KQ+L + DV P+ ++L AC
Sbjct: 593 -KQLLDQMDVKPDATVWKSLLSAC 615
>Medtr4g130500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:54376407-54379381 | 20130731
Length = 783
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 198/551 (35%), Positives = 299/551 (54%), Gaps = 22/551 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARKVFD MPE +T WN M NG D + LF EM A ++ T+ V+ +
Sbjct: 161 YARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREM-VADGVRVDSSTVTAVLPAA 219
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ ++ G + C+A K GF + ++ T LI +YS G V A +F + +++ +
Sbjct: 220 AELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYN 279
Query: 123 AMISAYISCGDVGSGRRL---LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
AMIS + + G +L L + ER + S I G I L +
Sbjct: 280 AMISGFTANGGTECSVKLFRELLFSGER---VSSSTIVGLIPLHSPFGHLHLACSIHGFC 336
Query: 180 VMSWNTLLNGYANSGDVGSFEKV---------FEEMPERNVYSWNVLIGGYARNGRFSDA 230
V S +LN ++ + K+ F+E PE+ V +WN +I GY +NG A
Sbjct: 337 VKS-GIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETA 395
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+ FK+M+ + + PN T+ +L AC++LG+L GKWVH +S + N++V AL+D
Sbjct: 396 ISLFKEMM-KTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVD 454
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MYAKCG I A +F+ + ++ ++WNTMI G +HG +AL L+++M + P VT
Sbjct: 455 MYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVT 514
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F+ +L AC+H GLV +G F +MV+ Y I P IEHY CM D+LGR+G L++A+ F++KM
Sbjct: 515 FLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKM 574
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P+EP +W +LLGAC HK+ +IA LA + L EL+P + +V+LSNIY + A
Sbjct: 575 PVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAA 634
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY-- 528
++ ++ K PGC++IE N + F S D H IY L LT +R GY
Sbjct: 635 SIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREMGYQA 694
Query: 529 --VPNLVDVAQ 537
VP L DV +
Sbjct: 695 ETVPALHDVEE 705
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 212/471 (45%), Gaps = 25/471 (5%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HAR +F +P+P+ +N + G+SL +S + L+ + R ++FT V +C
Sbjct: 62 HARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC 121
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S + +H + G+ N F+ +AL+++Y V A KVF MPER+ V+W
Sbjct: 122 SND---KHLMLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
MI+ + +L R++V + + + + +A EL + +
Sbjct: 179 TMINGLVKNCCFDDSIQLF-----REMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQC 233
Query: 183 -------------WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L++ Y+ GDV + +F + ++ ++N +I G+ NG
Sbjct: 234 LALKIGFGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTEC 293
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
+++ F+++L G+ V + T+V ++ S G L + +H + G N V A
Sbjct: 294 SVKLFRELLFSGERVSSS-TIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFT 352
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+Y K I+ A +F+ + +++WN MI+G +G+T A+SLF +M + P+ V
Sbjct: 353 AIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAV 412
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T ILSAC +G + G + ++ ++ P I + D+ + G + +A
Sbjct: 413 TITTILSACAQLGSLSFG-KWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDS 471
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
M E + V W +++ H A + ++ L NP+ LS +Y
Sbjct: 472 MS-EKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHL-GYNPSAVTFLSVLY 520
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 205/463 (44%), Gaps = 55/463 (11%)
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+KA Q H G++++ T L + + A +F +P+ ++ ++
Sbjct: 20 NKASTFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPKPDIFLFN 79
Query: 123 AMISAYISCGDVGSG--------RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
++ + S D S RR +L+P+ +++ + ++ A + D
Sbjct: 80 VLVRGF-SLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDG 138
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+V + L++ Y V KVF+ MPER+ WN +I G +N F D+++ F
Sbjct: 139 Y-GSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLF 197
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++M+ +G V + T+ AVL A + L L +G + A IG+ +V LI +Y+K
Sbjct: 198 REMVADG-VRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSK 256
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG + +A +F ++R D+I++N MI+G +G T ++ LF ++ S E+ T VG+
Sbjct: 257 CGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGL 316
Query: 355 LS----------ACTHMGL-VRDGFLY-------FQSMVDHYSIIPQIEH---------- 386
+ AC+ G V+ G + F ++ + + I H
Sbjct: 317 IPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTV 376
Query: 387 --YGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEIAELAF-- 439
+ M + G + A+S ++M P+AV T++L AC ++ L+F
Sbjct: 377 VAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSAC-----AQLGSLSFGK 431
Query: 440 --QHLIELEPKNPANFV--MLSNIYKDLGRWQDVARLKIAMRD 478
HLI+ E P +V L ++Y G + +L +M +
Sbjct: 432 WVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE 474
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A ++FD M E NT TWN M GY L + + L+ EM P + T V+
Sbjct: 462 ISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNP-SAVTFLSVLY 520
Query: 61 SCSKAGAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSA-------KGSVGDAYKVFGE 112
+CS AG V EGE++ H + N + LIE Y+ G + A + +
Sbjct: 521 ACSHAGLVGEGEEIFHNMV-------NKYRIEPLIEHYACMVDILGRSGQLEKALEFIKK 573
Query: 113 MP-ERNVVVWTAMISAYISCGDVGSGR----RLLDLAP 145
MP E VW ++ A + D R RL +L P
Sbjct: 574 MPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDP 611
>Medtr8g027150.1 | PPR containing plant-like protein | HC |
chr8:9538952-9542067 | 20130731
Length = 506
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/450 (40%), Positives = 268/450 (59%), Gaps = 10/450 (2%)
Query: 84 KWNSFLCTALIEMYSAKGSVGDAYK---VFGEMPERNVVVWTAMISAYISCGDVGSGR-- 138
K +FL LI+ S+K Y + G P N + + + S + G+
Sbjct: 44 KPTTFLYNKLIQACSSKHQCFTLYSQMYLHGHSP--NQYTFNFLFTTCTSLSSLSLGQMI 101
Query: 139 --RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
+ + + DV + ++ Y + G + AR +FD+M +++ +WN ++ G GD+
Sbjct: 102 HTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDM 161
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
++F MP RNV SW ++ GY +N ++ AL F +M E DV PN+ TL +VL A
Sbjct: 162 ERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPA 221
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR-RDIIS 315
C+ LGAL++G+ V VYA G+ N+FV NA+++MYAKCG I+ A VF+ + R R++ S
Sbjct: 222 CANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCS 281
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
WN+MI GLA+HG A+ L+DQM PD VTFVG+L ACTH G+V G FQSM
Sbjct: 282 WNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDVTFVGLLLACTHGGMVEKGKHVFQSMT 341
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
++IIP++EHYGCM DLLGRAG L +A +++MPM+PD+VIW +LLGAC H NVE+A
Sbjct: 342 RDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSVIWGTLLGACSFHGNVELA 401
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
E+A + L LEP NP N+V+LSNIY G+W VA+L+ M+ + K G S IE
Sbjct: 402 EVAAESLFVLEPWNPGNYVILSNIYASAGKWDGVAKLRKVMKGSKITKTAGQSFIEEGGQ 461
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRL 525
+ +F D H E+ I+ L G+ +++
Sbjct: 462 LHKFIVEDRSHSESSEIFALLNGVYEMIKF 491
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 173/374 (46%), Gaps = 54/374 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A+ + +P T +N + S S L+++M +P N +T +
Sbjct: 32 LNYAQVLLHHSQKPTTFLYNKLIQACS---SKHQCFTLYSQMYLHGHSP-NQYTFNFLFT 87
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ ++ G+ +H K GFK + F TAL++MY+ G + A VF EM + +
Sbjct: 88 TCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNVFDEMSVKELAT 147
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
W AM++ GD+ L L P R+VV W+ ++SGY+++ A LF +M
Sbjct: 148 WNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKALGLFMRMEREKD 207
Query: 176 --PN---------------------------------RDVMSWNTLLNGYANSGDVGSFE 200
PN +++ N +L YA G +
Sbjct: 208 VSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFFKNLFVCNAVLEMYAKCGKIDVAW 267
Query: 201 KVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
KVF+E+ RN+ SWN +I G A +G+ A++ + QML EG +P+D T V +LLAC+
Sbjct: 268 KVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREG-TLPDDVTFVGLLLACTH 326
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVG----NALIDMYAKCGVIESAVDVFNCLDRR-DII 314
G ++ GK HV+ +S+ N+ ++D+ + G + A +V + + D +
Sbjct: 327 GGMVEKGK--HVF-QSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKRMPMKPDSV 383
Query: 315 SWNTMINGLAMHGN 328
W T++ + HGN
Sbjct: 384 IWGTLLGACSFHGN 397
>Medtr8g063290.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:26513420-26510735 | 20130731
Length = 659
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/535 (35%), Positives = 291/535 (54%), Gaps = 39/535 (7%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G RKVFD+M + N +N M Y + D +++F EM P N +T P V+++
Sbjct: 70 GLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDN-YTYPCVLKA 128
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CS + +R G +H K G +N F+ LI MY
Sbjct: 129 CSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYG----------------------- 165
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA----RELFDKMPN 177
CG + RR+ D +DVV W+ +++GY + A RE+ D
Sbjct: 166 --------KCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK 217
Query: 178 RDVMSWNTLLNGYAN--SGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D + +L+ AN S +V EK+F + +N+ SWNV+I Y +N + A++ +
Sbjct: 218 PDGCTMASLMPAVANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYL 277
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QM + V P+ T +VL AC L AL +G+ +H Y E N+ + N+LIDMYA+C
Sbjct: 278 QM-EKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC 336
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ A VF+ + RD+ SW ++I+ M G +A++LF +M NS + PD + FV IL
Sbjct: 337 GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAIL 396
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC+H GL+ +G +YF+ M D Y I P+IEHY C+ DLLGRAG +D+A + +++MP+EP+
Sbjct: 397 SACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPN 456
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W +LL +CR N++I LA +L++L P+ +V+LSNIY GRW++V ++
Sbjct: 457 ERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSV 516
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
M+ RK PG S +E N+ V F + D HP+++ IY L L ++ GYVP
Sbjct: 517 MKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVP 571
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 142/275 (51%), Gaps = 23/275 (8%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L+ YA G+ G KVF+EM +RNV +NV+I Y N R+ D L F++M V G P
Sbjct: 59 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREM-VNGGFRP 117
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+++T VL ACS L G +H +G N+FVGN LI MY KCG + A VF
Sbjct: 118 DNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVF 177
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ + +D++SWN+M+ G A + DAL + +M++ ++PDG T ++ A +
Sbjct: 178 DEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS--S 235
Query: 366 DGFLYFQSM---VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIW 419
+ LY + + ++ ++I + M + + L QAV +M +EPDA+ +
Sbjct: 236 ENVLYVEKIFVNLERKNLIS----WNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITF 291
Query: 420 TSLLGAC----------RTHKNVEIAELAFQHLIE 444
S+L AC R H+ VE +L L+E
Sbjct: 292 ASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLE 326
>Medtr2g086150.1 | PPR containing plant-like protein | HC |
chr2:36227786-36230819 | 20130731
Length = 867
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/538 (35%), Positives = 288/538 (53%), Gaps = 8/538 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFDKM + TWN+M GY +V +F +M A P H T V++SC+
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKP-THMTFASVIKSCA 306
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVVWT 122
+ + + C A K GF + + TAL+ S + DA +F M E +NVV WT
Sbjct: 307 SLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWT 366
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNR 178
AMIS + G L V +S +++ + E+ R
Sbjct: 367 AMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVHYPVFVSEMHAEVIKTNYER 426
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
LL+ Y G+ KVFE + +++ +W+ ++ GYA+ G +A + F Q++
Sbjct: 427 SSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLI 486
Query: 239 VEGDVVPNDFTLVAVLLAC-SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
EG + PN+FT +V+ AC S A + GK H YA + + V +AL+ MYAK G
Sbjct: 487 KEG-IKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGN 545
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
I+SA +VF RD++SWN+MI+G + HG AL +FD+M+ D VTF+G+++A
Sbjct: 546 IDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITA 605
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
CTH GLV G YF SM++ + I P ++HY CM DL RAG+L++A+ + +MP P A
Sbjct: 606 CTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGAT 665
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+W +LLGA R H+NVE+ ELA + LI L+P++ A +V+LSN+Y G WQ+ ++ M
Sbjct: 666 VWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMD 725
Query: 478 DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
+K PG S IE + F + D HP + IY L L++ L+ GY P+ +V
Sbjct: 726 KRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIRLKDAGYQPDTKNV 783
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 182/371 (49%), Gaps = 27/371 (7%)
Query: 4 ARKVFDKMPE-PNT-ATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A +FDK+P P T N + YS + ++ + LF + ++ P + TL V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQP-DESTLSCVFNI 102
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C+ + + G QVHC K G + + T+L++MY +V D +VF EM ERNVV W
Sbjct: 103 CAGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSW 162
Query: 122 TAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESG---------DMV 166
T++++ Y G G L + P R V S VI+ + G MV
Sbjct: 163 TSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTV--STVIAALVNEGVVGIGLQVHAMV 220
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ +P +N+L++ Y+ G + VF++M R+ +WN +I GY RNG+
Sbjct: 221 VKHGFEEAIP-----VFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQ 275
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+ E F +M + G V P T +V+ +C+ L L + K + A G+ + V
Sbjct: 276 DLEVFEIFNKMQLAG-VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT 334
Query: 287 ALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
AL+ +KC ++ A+ +F+ ++ ++++SW MI+G +G A++LF QM+ +
Sbjct: 335 ALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVK 394
Query: 346 PDGVTFVGILS 356
P+ T+ IL+
Sbjct: 395 PNHFTYSAILT 405
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 131/245 (53%), Gaps = 8/245 (3%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
+L++ Y + +V +VF+EM ERNV SW L+ GY+ NG + E F QM EG V+
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEG-VL 191
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN +T+ V+ A G + +G VH G++ + V N+LI +Y++ G++ A DV
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT---HM 361
F+ ++ RD ++WN+MI G +G + +F++M+ + +P +TF ++ +C +
Sbjct: 252 FDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLREL 311
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
LV+ + +++ ++ QI M L + +D A+S M + V WT+
Sbjct: 312 ALVK--LMQCKALKSGFT-TDQIVITALMV-ALSKCKEMDDALSLFSLMEEGKNVVSWTA 367
Query: 422 LLGAC 426
++ C
Sbjct: 368 MISGC 372
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 10/241 (4%)
Query: 202 VFEEMPER--NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+F+++P R + N L+ Y+R+ + +AL F +L + P++ TL V C+
Sbjct: 47 LFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLL-HSSLQPDESTLSCVFNICA- 104
Query: 260 LGALD--MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
G+LD +G+ VH G ++ VG +L+DMY K + VF+ + R+++SW
Sbjct: 105 -GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
+++ G + +G LF QM+ P+ T +++A + G+V G L +MV
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIG-LQVHAMVVK 222
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAE 436
+ I + + L R G+L A KM + D V W S++ G R +++E+ E
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR-DWVTWNSMIAGYVRNGQDLEVFE 281
Query: 437 L 437
+
Sbjct: 282 I 282
>Medtr4g024860.1 | SLOW growth protein | HC | chr4:8430392-8426025 |
20130731
Length = 1026
Score = 342 bits (876), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 188/573 (32%), Positives = 306/573 (53%), Gaps = 44/573 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ + ++ ++ E N +WNA GY + +L+ M ++ T P++++
Sbjct: 107 LDYCTRILYRIKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLK 166
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C + G V K GF+ + F+ A I M + G + AY VF + R++V
Sbjct: 167 GCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVT 226
Query: 121 WTAMISAYIS--------------------------CGDVGSGRRLLDL----------- 143
W +MI+ + G + S ++ DL
Sbjct: 227 WNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIK 286
Query: 144 --APERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
E + + + ++ Y++ G++++AR LFD M + ++SW T++ GYA G + +
Sbjct: 287 EHGLEFTIPLTNALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVARE 346
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+ ++PE++V WN +I G + + +AL F +M + + P+ T+V L ACS+LG
Sbjct: 347 ILYKIPEKSVVPWNAIISGCVQAKQGKEALALFHEMQIR-TIEPDKVTMVNCLSACSQLG 405
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
ALD+G W+H Y E ++ +G AL+DMYAKCG I A+ VF + +R+ ++W +I
Sbjct: 406 ALDVGIWIHHYIERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVIC 465
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
GLA+HGN DALS F +M + PD +TF+G+LSAC H GLV +G YF M +++
Sbjct: 466 GLALHGNAQDALSYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVS 525
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P+++HY CM DLLGRAG L++A V+ MPM DA + +L ACR + NV+I E
Sbjct: 526 PKLKHYSCMVDLLGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFK 585
Query: 442 LIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
L+E++P++ N+V+L+++Y + W++ + M D G K PGCS++E N V EF
Sbjct: 586 LLEIDPQDSGNYVLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVEINGIVHEFVV 645
Query: 502 LDERHPETESIYRALRGLT----MLLRLHGYVP 530
D HP++E IY L LT +++R HGY P
Sbjct: 646 RDVSHPQSEWIYECLVTLTKQLDVIVRKHGYFP 678
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 185/416 (44%), Gaps = 45/416 (10%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAY--KVFGEMPERNVVVWTAMISAYI 129
+Q+ G N F + L+ + S Y ++ + E NV W A I Y+
Sbjct: 74 KQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILYRIKELNVFSWNAAIRGYV 133
Query: 130 SCGDVGSG-----RRLLDLAPERDVVMWSIVISG----YIESGDMVSARELFDKMPNRDV 180
GD+ G R LL + D + +++ G Y + + D+
Sbjct: 134 ESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDI 193
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
N + + G++ VF + R++ +WN +I G + G +A++ +K+M E
Sbjct: 194 FVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAE 253
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
V PN+ T++ ++ +CS++ L++GK H Y + G + + + NAL+DMY KCG + +
Sbjct: 254 -KVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLT 312
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHG-------------------------------NT 329
A +F+ + ++ ++SW TM+ G A G
Sbjct: 313 ARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQG 372
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
+AL+LF +M+ +PD VT V LSAC+ +G + G ++ ++ + + +
Sbjct: 373 KEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVG-IWIHHYIERHKLSIDVALGTA 431
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
+ D+ + G + +A+ ++P + + + WT+++ H N + A F +I +
Sbjct: 432 LVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDALSYFSKMIHI 486
>Medtr1g007600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:452191-449631 | 20130731
Length = 827
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 192/593 (32%), Positives = 300/593 (50%), Gaps = 85/593 (14%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
EPN TW+A+ G+S + V LFA M A AP + TL V+ +CS+ + G+
Sbjct: 232 EPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAP-DARTLASVLPACSRMKWLFVGK 290
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP------------------ 114
++H + N F+ AL+ MY G + A+K+F +
Sbjct: 291 ELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFKIFSKFARKCAASYNTMIVGYLENG 350
Query: 115 -----------------ERNVVVWTAMISAYI---------------------------- 129
ER+ + W MIS ++
Sbjct: 351 NVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLG 410
Query: 130 ---------SCGDVGSGRRLLDLAPERDVVMWSIV----ISGYIESGDMVSARELFDKMP 176
+C + G+ + +A + + S V + Y + D+++A+ FD++
Sbjct: 411 SILTGFADMTC--IRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEIS 468
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALE 232
RD +WN L++GYA +G ++ E M E NVY+WN ++ G N ++ A++
Sbjct: 469 ERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAGLVENKQYDLAMQ 528
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +M V + P+ +T+ +L ACS+L + GK VH Y+ GY + +G L+DMY
Sbjct: 529 LFNEMQVS-SLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSDAHIGATLVDMY 587
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG I+ V+N + +++ N M+ AMHG+ + + +F +M +SR +PD VTF+
Sbjct: 588 AKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFL 647
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+LS+C H G ++ G+ F M + Y+I P ++HY CM DLL RAG LD+A ++ MPM
Sbjct: 648 SVLSSCVHAGSIKIGYECFYLM-ETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPM 706
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
E D+V W++LLG C HK V + E+A + LIELEP N N+V+L+N+Y GRW D+A+
Sbjct: 707 EADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLYASAGRWHDLAKT 766
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
+ M D G +K PGCS IE D V F + D+ H E IY L LT +R+
Sbjct: 767 RELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFMLDNLTKFIRI 819
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 144/559 (25%), Positives = 225/559 (40%), Gaps = 125/559 (22%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAE-MNRAAAAPLNHFTLPIVVRSC 62
A +FDKM N +W A+ + +LF E + L+ F P+V+ C
Sbjct: 85 AWHMFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNIC 144
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G + G QVH + K GF N ++ ALI+MY GS+ +A KV M +++ V W
Sbjct: 145 CGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWN 204
Query: 123 AMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARELFDKM--- 175
++I+A ++ G V LL+ E +VV WS VI G+ + V + ELF +M
Sbjct: 205 SIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGA 264
Query: 176 -------------PNRDVMSW-----------------------NTLLNGYANSGDVGSF 199
P M W N L+ Y GD+ S
Sbjct: 265 GVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSA 324
Query: 200 EKVF-----------------------------------EEMPERNVYSWNVLIGGYARN 224
K+F +E ER+ SWN +I G+ N
Sbjct: 325 FKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDN 384
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
F DAL F+ +L+EG + P+ FTL ++L + + + GK +H A G + N FV
Sbjct: 385 FMFDDALMLFRDLLMEG-IEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFV 443
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD------------- 331
G AL++MY KC I +A F+ + RD +WN +I+G A
Sbjct: 444 GGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGF 503
Query: 332 ----------------------ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
A+ LF++M+ S +PD T IL+AC+ + + G
Sbjct: 504 EPNVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRG-- 561
Query: 370 YFQSMVDHYSIIPQIE---HYGC-MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
V YSI + H G + D+ + G + K+ P+ V ++L A
Sbjct: 562 ---KQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCHNAMLTA 617
Query: 426 CRTHKNVEIAELAFQHLIE 444
H + E + F+ +++
Sbjct: 618 YAMHGHGEEGIVIFRRMLD 636
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 183/372 (49%), Gaps = 49/372 (13%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
PL T +++S + ++ G+Q+H + K GF ++F+ T L++MYS S DA+
Sbjct: 31 PLTSTTYSTILQS---SNSLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWH 87
Query: 109 VFGEMPERNVVVWTAMISAY-----------------------------------ISCG- 132
+F +M +N+ WTA++ + I CG
Sbjct: 88 MFDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGL 147
Query: 133 -DVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL 187
D+ GR++ + + +V + + +I Y + G + A+++ + M +D +SWN+++
Sbjct: 148 GDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMTQKDCVSWNSII 207
Query: 188 NGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+G V + E M E NV +W+ +IGG++ N +++E F +M+ G V
Sbjct: 208 TACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAG-V 266
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ TL +VL ACSR+ L +GK +H Y N FV NAL+ MY +CG ++SA
Sbjct: 267 APDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGDMKSAFK 326
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F+ R+ S+NTMI G +GN A LF QM+ + D +++ ++S +
Sbjct: 327 IFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISGHVDNFM 386
Query: 364 VRDGFLYFQSMV 375
D + F+ ++
Sbjct: 387 FDDALMLFRDLL 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 12/180 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
H +V++K+ PN NAM Y++ + +V+F M + P +H T V+ SC
Sbjct: 595 HCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRP-DHVTFLSVLSSC 653
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVW 121
AG+++ G + + T ++++ S G + +AY++ MP E + V W
Sbjct: 654 VHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVTW 713
Query: 122 TAM-----ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG---DMVSARELFD 173
+A+ I ++ G++ + +L++L P + + ++ + Y +G D+ REL +
Sbjct: 714 SALLGGCFIHKEVALGEI-AAEKLIELEPS-NTGNYVLLANLYASAGRWHDLAKTRELMN 771
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 8/207 (3%)
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
P T + +L S +L +GK +H ++ G+ + FV L+ MY+ E A +
Sbjct: 31 PLTSTTYSTILQSSN--SLTLGKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVGILSACTHMG 362
F+ + +++ SW ++ G LF++ E+ D F +L+ C +G
Sbjct: 89 FDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLG 148
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ G MV + + + + D+ G+ G LD+A + M + D V W S+
Sbjct: 149 DLELG-RQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEGMT-QKDCVSWNSI 206
Query: 423 LGACRTHKNVEIAELAFQHLI--ELEP 447
+ AC + V A ++++ ELEP
Sbjct: 207 ITACVANGVVYEALDLLENMLLSELEP 233
>Medtr7g089260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:34908078-34912174 | 20130731
Length = 1099
Score = 340 bits (873), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 189/543 (34%), Positives = 294/543 (54%), Gaps = 10/543 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVF MP + +WNAM +G+ + + + M + ++ T+ ++ C+
Sbjct: 175 AHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRM-KGEGVKMDTITVASILPVCA 233
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ V G +H K G + F+ ALI MYS G + DA VF +M R++V W +
Sbjct: 234 QSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNS 293
Query: 124 MISAYISCGDVGSGRRL---LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+I+AY D + R + L R D++ + S + + D +R + + R
Sbjct: 294 IIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRRE 353
Query: 179 ----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
DV+ N L+N YA G + VF+++P ++ SWN L+ GY +NG S+A++A+
Sbjct: 354 WLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY 413
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
M D +PN T V+++ A S +GAL G +H ++FV LID+Y K
Sbjct: 414 NMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGK 473
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E A+ +F + R + WN +I L +HG +AL LF M R + D +TFV +
Sbjct: 474 CGRLEDAMSLFYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSL 533
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H GLV +G F M Y I P ++HYGCM DLLGRAG L++A VR MP++P
Sbjct: 534 LSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQP 593
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
DA IW +LL AC+ + N E+ LA L+E++ +N +V+LSNIY + +W+ V +++
Sbjct: 594 DASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRS 653
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVD 534
RD G RK PG S + FY+ ++ HP+ IY+ L+ L+ ++ GYVP+
Sbjct: 654 LARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSF 713
Query: 535 VAQ 537
V Q
Sbjct: 714 VYQ 716
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 236/454 (51%), Gaps = 21/454 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGY----SLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+R FD + + N +WN++ + Y E+ V LF+ P + +T P ++
Sbjct: 73 SRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRP-DFYTFPPIL 131
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C ++ +G++VHC K GF+ + F+ +L+ +YS G + A+KVF +MP ++V
Sbjct: 132 KACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVG 188
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSA----REL 171
W AMIS + G+ +L+ V M +I ++ + +S D+++ +
Sbjct: 189 SWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHV 248
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ DV N L+N Y+ G + + VF++M R++ SWN +I Y +N S AL
Sbjct: 249 LKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTAL 308
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALID 290
FK M + G + P+ T+V++ S+L + + + + + ++ +GNAL++
Sbjct: 309 RFFKGMQL-GGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVN 367
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGV 349
MYAK G + A VF+ L R+D ISWNT++ G +G ++A+ ++ M+ R+ P+
Sbjct: 368 MYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQG 427
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T+V I+ A +H+G ++ G ++ + S+ + C+ DL G+ G L+ A+S +
Sbjct: 428 TWVSIIPAYSHVGALQQGMKIHAKLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYE 486
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+P + +V W +++ + H E A F+ ++
Sbjct: 487 IPRD-TSVPWNAIIASLGIHGRGEEALQLFKDML 519
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 149/300 (49%), Gaps = 12/300 (4%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+++++ L+N Y GD+ F+ + ++N++SWN +I Y R G++ +A+ Q
Sbjct: 51 SQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQ 110
Query: 237 MLVE---GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+ G + P+ +T +L AC L +D GK VH +G++ ++FV +L+ +Y+
Sbjct: 111 LFSMCGGGHLRPDFYTFPPILKACVSL--VD-GKKVHCCVFKMGFEDDVFVAASLVHLYS 167
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+ GV++ A VF + +D+ SWN MI+G +GN A AL + ++MK + D +T
Sbjct: 168 RYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVAS 227
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
IL C V +G L ++ H + + + ++ + G L A +M +
Sbjct: 228 ILPVCAQSDDVINGVLIHLHVLKH-GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVR 286
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP--ANFVMLSNIYKDLGRWQDVAR 471
D V W S++ A + + A L F ++L P V L++I+ L Q ++R
Sbjct: 287 -DLVSWNSIIAAYEQNNDPSTA-LRFFKGMQLGGIRPDLLTVVSLTSIFSQLSD-QRISR 343
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A VFD++P +T +WN + GY+ + + + M N T ++
Sbjct: 375 MNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIP 434
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S GA+++G ++H K + F+ T LI++Y G + DA +F E+P V
Sbjct: 435 AYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVP 494
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W A+I+ S G G G L L DM++ R D
Sbjct: 495 WNAIIA---SLGIHGRGEEALQLFK------------------DMLAER------VKADH 527
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFK 235
+++ +LL+ ++SG V +K F+ M + ++ + ++ R G A E +
Sbjct: 528 ITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVR 587
Query: 236 QMLVEGDVVPNDFTLVAVLLAC-----SRLGALDMGKWVHVYAESIGY 278
M ++ P+ A+L AC + LG L + + V +E++GY
Sbjct: 588 NMPIQ----PDASIWGALLSACKIYGNAELGTLASDRLLEVDSENVGY 631
>Medtr1g059280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21515828-21518970 | 20130731
Length = 616
Score = 340 bits (871), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 193/485 (39%), Positives = 274/485 (56%), Gaps = 11/485 (2%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ C A REG++VH K + + FL T LI +Y+ S+GDA+ VF EMPERN
Sbjct: 46 ILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPERN 105
Query: 118 VVVWTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARE--- 170
VV WTAMISAY G L L E + ++ V++ S + R+
Sbjct: 106 VVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIHS 165
Query: 171 LFDKMPNRD-VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
L K+ D V ++LL+ YA G + VFE +PER+V S +I GYA+ G +
Sbjct: 166 LIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEE 225
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
ALE F+++ EG + N T VL A S L ALD+GK VH + + + N+LI
Sbjct: 226 ALELFRRLQGEG-MKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLI 284
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPDG 348
DMY+KCG + + +F+ + R +ISWN M+ G + HG + L LF M+ ++ +PD
Sbjct: 285 DMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDS 344
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVD-HYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VT + +LS C+H GL G F M + P++EHYGC+ DLLGR+G +++A F+
Sbjct: 345 VTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFI 404
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
+KMP EP A IW SLLGACR H NV+I E A Q L+E+EP N N+V+LSN+Y GRW+
Sbjct: 405 KKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWE 464
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
DV+ L+ M K PG S IE + + F++ D HP E I ++ L+ + G
Sbjct: 465 DVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVG 524
Query: 528 YVPNL 532
YVP+L
Sbjct: 525 YVPDL 529
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 171/340 (50%), Gaps = 14/340 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A VFD+MPE N +W AM + YS + LF +M R+ P N FT V+
Sbjct: 91 LGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEP-NEFTFATVLT 149
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC+ + G Q+H + K ++ + F+ ++L++MY+ G + +A VF +PER+VV
Sbjct: 150 SCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVS 209
Query: 121 WTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGY-----IESGDMVSAREL 171
TA+IS Y G + RRL + + V ++ V++ ++ G V L
Sbjct: 210 CTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVL 269
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
++P+ V+ N+L++ Y+ G++ ++F+ M ER V SWN ++ GY+++G + L
Sbjct: 270 RSEIPSFVVLQ-NSLIDMYSKCGNLTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVL 328
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALI 289
+ F M E V P+ T++AVL CS G D G + + + I + M ++
Sbjct: 329 KLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVV 388
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGN 328
D+ + G +E A + + + W +++ +H N
Sbjct: 389 DLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSN 428
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 112/245 (45%), Gaps = 36/245 (14%)
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
A+L C A G+ VH + Y ++F+ LI +Y KC + A +VF+ + R
Sbjct: 45 AILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMPER 104
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-HMGLV------ 364
+++SW MI+ + G + AL+LF QM S +P+ TF +L++CT +G +
Sbjct: 105 NVVSWTAMISAYSQRGYASQALNLFLQMLRSGTEPNEFTFATVLTSCTSSLGFILGRQIH 164
Query: 365 --------RDGFLYFQSMVDHYS-------------IIPQIEHYGCMADLLGRA--GLLD 401
D S++D Y+ +P+ + C A + G A GL +
Sbjct: 165 SLIIKLNYEDHVFVGSSLLDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDE 224
Query: 402 QAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSN 458
+A+ R++ M+ + V +T +L A +++ + H++ E +FV+L N
Sbjct: 225 EALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSE---IPSFVVLQN 281
Query: 459 IYKDL 463
D+
Sbjct: 282 SLIDM 286
>Medtr1g111020.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50134416-50129873 | 20130731
Length = 860
Score = 339 bits (870), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 291/536 (54%), Gaps = 11/536 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF +M P+T +WNA+ G L E + ++L EM ++ + P N FTL +++C+
Sbjct: 238 AVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCP-NVFTLSSALKACA 296
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN-VVVWT 122
G G Q+H + K + F+ LI++YS + DA + + MP ++ ++
Sbjct: 297 AMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGN 356
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN----- 177
A+IS Y CGD L ++ +S ++S + ++ ++
Sbjct: 357 ALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKC 416
Query: 178 ---RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
D N+LL+ Y + K+FEE ++ ++ +I Y+++G +AL+ +
Sbjct: 417 GIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLY 476
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
QM V D+ P+ F ++L AC+ L A + GK +HV+A G+ ++F N+L++MYAK
Sbjct: 477 LQMQV-ADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAK 535
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG IE A F+ + +R I+SW+ MI GLA HG+ +AL +F+QM P+ +T V +
Sbjct: 536 CGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSV 595
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L AC H GLV +G YF++M + + I P EH+ CM DLLGR+G L++AV V +P E
Sbjct: 596 LCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEA 655
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D +W +LLGA R HKNVE+ E A + L LEP V+L+NIY G W++VA ++
Sbjct: 656 DGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRK 715
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
M+++ +K PG S IE D + F D H ++ I+ L L+ LL GY P
Sbjct: 716 VMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSP 771
Score = 162 bits (411), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 232/519 (44%), Gaps = 56/519 (10%)
Query: 2 GHARKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
G+A + D+ EP T +W+A+ + Y H++ ++ F EM N FT P V++
Sbjct: 33 GYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS-NEFTFPTVLK 91
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS + G++VH + GF+ ++F+ L+ MY+ G D+ K+FG + E VV
Sbjct: 92 ACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVVS 151
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVI---SGYIESGDMVSARELFD 173
W A+ S ++ + +R+++ + SI++ +G + G + L
Sbjct: 152 WNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLLM 211
Query: 174 KMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
K+ + D S N L++ YA +G + VF EM + SWN +I G + AL
Sbjct: 212 KLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALI 271
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+M G PN FTL + L AC+ +G D+G+ +H + I ++FV LID+Y
Sbjct: 272 LLNEMKKSGS-CPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLY 330
Query: 293 AKCGVIESAVDVFNCLDRRD-IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
+KC +++ A ++ + +D II+ N +I+G + G+ A+SLF ++ + + T
Sbjct: 331 SKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTTL 390
Query: 352 VGILSACTHMGLVR---------------DGFLYFQSMVDHYSIIPQIEH---------- 386
+L + + ++ F S++D Y I+
Sbjct: 391 STVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTW 450
Query: 387 -----YGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC------RTHKNV 432
Y M + G ++A+ +M ++PD + +SLL AC K +
Sbjct: 451 EDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQL 510
Query: 433 EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+ + F + ++ N L N+Y G +D R
Sbjct: 511 HVHAIKFGFMSDIFASNS-----LVNMYAKCGSIEDADR 544
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 164/339 (48%), Gaps = 13/339 (3%)
Query: 1 MGHARKVFDKMP-EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M AR+ +D MP + + NA+ +GYS + LF E++ N TL V+
Sbjct: 336 MDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENI-DFNQTTLSTVL 394
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+S + ++ +Q+H ++ K G + ++ +L++ Y + +A K+F E ++V
Sbjct: 395 KSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLV 454
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+T+MI+AY GD +L D+ V S + + +SA E ++
Sbjct: 455 AYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHA 514
Query: 179 -------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D+ + N+L+N YA G + ++ F E+P+R + SW+ +IGG A++G +AL
Sbjct: 515 IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEAL 574
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALID 290
F QML + V PN TLV+VL AC+ G ++ GK + E G K +ID
Sbjct: 575 IMFNQMLKDC-VSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMID 633
Query: 291 MYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+ + G + AV++ N + D W ++ +H N
Sbjct: 634 LLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKN 672
>Medtr2g036960.1 | PPR containing plant-like protein | HC |
chr2:16044626-16048085 | 20130731
Length = 702
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 197/530 (37%), Positives = 288/530 (54%), Gaps = 14/530 (2%)
Query: 12 PEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVRE 70
P PN +N M + T + + L+ +M +P N+FT P V +C+ +R
Sbjct: 77 PHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISP-NNFTFPFVFLACANLEEIRM 135
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
HC K G + +++ MY G G A KVF E+ E+++V W +++S Y
Sbjct: 136 ARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAK 195
Query: 131 CGDVGS-----GRRLLDLAPERDVVMWSIVISGYIESGDMVSAR--ELFDKMPNRDVMSW 183
G GR + E D + V+ E GD+ R E F V S+
Sbjct: 196 LGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSY 255
Query: 184 --NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+ L++ Y+ G++ S ++F+ MP R+ +WN I YA+NG +A+ F M E
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSM-KEN 314
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
V PN TL AVL AC+ +GALD+GK + YA G + ++FV ALIDMYAKCG +ESA
Sbjct: 315 GVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESA 374
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS--REQPDGVTFVGILSACT 359
VFN + R++ SWN MI+ LA HG +ALSLF++M + +P+ +TFV +LSAC
Sbjct: 375 QRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACV 434
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
H GLV +G+ F M + ++P+IEHY CM DLL RAG L +A + KMP +PD V
Sbjct: 435 HAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTL 494
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
+L AC+ KNV+I E Q L+EL+P N N+++ S IY++L W D AR++ MR+
Sbjct: 495 GALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMREN 554
Query: 480 GFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
G K PGCS IE + + EF S D ++ + + L L+ GY+
Sbjct: 555 GVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELKKEGYL 604
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 172/366 (46%), Gaps = 42/366 (11%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G ARKVFD++ E + +WN++ +GY+ R+ V +F + + + +L V+ +
Sbjct: 169 GVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGA 228
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C + G + G V +RG K NS++ +ALI MYS G + + ++F MP R+ + W
Sbjct: 229 CGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITW 288
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----- 176
A ISAY G L E V + ++ + + + A +L +M
Sbjct: 289 NAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATH 348
Query: 177 ---NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
D+ L++ YA G + S ++VF +MP +N SWN +I A +G+ +AL
Sbjct: 349 RGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSL 408
Query: 234 FKQMLVE-GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M E G PND T V++L AC G +D GY+ L DM
Sbjct: 409 FERMSDEGGSARPNDITFVSLLSACVHAGLVDE-----------GYR--------LFDMM 449
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+ + ++ ++C M++ L+ G+ +A + ++M E+PD VT
Sbjct: 450 STLFGLVPKIEHYSC-----------MVDLLSRAGHLYEAWDVIEKMP---EKPDNVTLG 495
Query: 353 GILSAC 358
+ SAC
Sbjct: 496 ALHSAC 501
>Medtr1g111020.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50133605-50130067 | 20130731
Length = 1017
Score = 338 bits (868), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 183/536 (34%), Positives = 291/536 (54%), Gaps = 11/536 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF +M P+T +WNA+ G L E + ++L EM ++ + P N FTL +++C+
Sbjct: 238 AVDVFREMIHPDTVSWNAIIAGCVLHEYNDLALILLNEMKKSGSCP-NVFTLSSALKACA 296
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN-VVVWT 122
G G Q+H + K + F+ LI++YS + DA + + MP ++ ++
Sbjct: 297 AMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDLYSKCEMMDDARRAYDLMPTKDHIIAGN 356
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN----- 177
A+IS Y CGD L ++ +S ++S + ++ ++
Sbjct: 357 ALISGYSQCGDDEQAISLFFELHHENIDFNQTTLSTVLKSVASLQQIKVCKQIHTLSIKC 416
Query: 178 ---RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
D N+LL+ Y + K+FEE ++ ++ +I Y+++G +AL+ +
Sbjct: 417 GIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLVAYTSMITAYSQHGDAEEALKLY 476
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
QM V D+ P+ F ++L AC+ L A + GK +HV+A G+ ++F N+L++MYAK
Sbjct: 477 LQMQV-ADIKPDPFVCSSLLNACANLSAYEQGKQLHVHAIKFGFMSDIFASNSLVNMYAK 535
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG IE A F+ + +R I+SW+ MI GLA HG+ +AL +F+QM P+ +T V +
Sbjct: 536 CGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEALIMFNQMLKDCVSPNHITLVSV 595
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L AC H GLV +G YF++M + + I P EH+ CM DLLGR+G L++AV V +P E
Sbjct: 596 LCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMIDLLGRSGKLNEAVELVNSIPFEA 655
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D +W +LLGA R HKNVE+ E A + L LEP V+L+NIY G W++VA ++
Sbjct: 656 DGSVWGALLGAARIHKNVELGEKAAERLFTLEPDKSGTLVLLANIYASAGMWENVANVRK 715
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
M+++ +K PG S IE D + F D H ++ I+ L L+ LL GY P
Sbjct: 716 VMQNSNVKKEPGMSWIEVKDRIHTFIVGDRNHSRSDEIFAKLDELSELLSKAGYSP 771
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/520 (24%), Positives = 232/520 (44%), Gaps = 56/520 (10%)
Query: 1 MGHARKVFDKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
G+A + D+ EP T +W+A+ + Y H++ ++ F EM N FT P V+
Sbjct: 32 FGYACNLLDQSTEPRTVVSWSALISRYVQNGFHKEALLAFNEMCTLGVKS-NEFTFPTVL 90
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++CS + G++VH + GF+ ++F+ L+ MY+ G D+ K+FG + E VV
Sbjct: 91 KACSIKKDLNMGKKVHAMTVVSGFESDAFVSNTLVVMYAKCGQFSDSKKLFGMILEPGVV 150
Query: 120 VWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVI---SGYIESGDMVSARELF 172
W A+ S ++ + +R+++ + SI++ +G + G + L
Sbjct: 151 SWNALFSCHVQSDFLAETVDLFKRMVEGKVRPNEYSLSIILNACAGLRDGGIGRTVHGLL 210
Query: 173 DKMPN-RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
K+ + D S N L++ YA +G + VF EM + SWN +I G + AL
Sbjct: 211 MKLGHGLDQFSANALVDMYAKAGRIEDAVDVFREMIHPDTVSWNAIIAGCVLHEYNDLAL 270
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+M G PN FTL + L AC+ +G D+G+ +H + I ++FV LID+
Sbjct: 271 ILLNEMKKSGS-CPNVFTLSSALKACAAMGLKDLGRQIHSCSVKIDSDSDLFVAVGLIDL 329
Query: 292 YAKCGVIESAVDVFNCLDRRD-IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
Y+KC +++ A ++ + +D II+ N +I+G + G+ A+SLF ++ + + T
Sbjct: 330 YSKCEMMDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENIDFNQTT 389
Query: 351 FVGILSACTHMGLVR---------------DGFLYFQSMVDHYSIIPQIEH--------- 386
+L + + ++ F S++D Y I+
Sbjct: 390 LSTVLKSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERT 449
Query: 387 ------YGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC------RTHKN 431
Y M + G ++A+ +M ++PD + +SLL AC K
Sbjct: 450 WEDLVAYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQ 509
Query: 432 VEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+ + + F + ++ N L N+Y G +D R
Sbjct: 510 LHVHAIKFGFMSDIFASNS-----LVNMYAKCGSIEDADR 544
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 164/339 (48%), Gaps = 13/339 (3%)
Query: 1 MGHARKVFDKMP-EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M AR+ +D MP + + NA+ +GYS + LF E++ N TL V+
Sbjct: 336 MDDARRAYDLMPTKDHIIAGNALISGYSQCGDDEQAISLFFELHHENI-DFNQTTLSTVL 394
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+S + ++ +Q+H ++ K G + ++ +L++ Y + +A K+F E ++V
Sbjct: 395 KSVASLQQIKVCKQIHTLSIKCGIYSDFYVINSLLDTYGKCSHIDEASKIFEERTWEDLV 454
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+T+MI+AY GD +L D+ V S + + +SA E ++
Sbjct: 455 AYTSMITAYSQHGDAEEALKLYLQMQVADIKPDPFVCSSLLNACANLSAYEQGKQLHVHA 514
Query: 179 -------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D+ + N+L+N YA G + ++ F E+P+R + SW+ +IGG A++G +AL
Sbjct: 515 IKFGFMSDIFASNSLVNMYAKCGSIEDADRAFSEIPQRGIVSWSAMIGGLAQHGHGKEAL 574
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALID 290
F QML + V PN TLV+VL AC+ G ++ GK + E G K +ID
Sbjct: 575 IMFNQMLKDC-VSPNHITLVSVLCACNHAGLVNEGKQYFETMEEKFGIKPTQEHHACMID 633
Query: 291 MYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+ + G + AV++ N + D W ++ +H N
Sbjct: 634 LLGRSGKLNEAVELVNSIPFEADGSVWGALLGAARIHKN 672
>Medtr4g113240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:46542320-46539266 | 20130731
Length = 1017
Score = 338 bits (868), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 194/541 (35%), Positives = 295/541 (54%), Gaps = 16/541 (2%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A VF MP +T +WN+M +G E + V F M R P N F++ + SC
Sbjct: 392 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSN-FSVISTLSSC 450
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S G + G Q+H K G + + AL+ +Y+ S+ + KVF +MPE + V W
Sbjct: 451 SSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWN 510
Query: 123 AMISAYIS--CGDVGSGRRLLDLA-----PERDV---VMWSIVISGYIESGDMVSARELF 172
+ I A + + + L++ P R ++ ++ + G + A L
Sbjct: 511 SFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILK 570
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDAL 231
+ + + + N LL Y + E +F M ER + SWN +I GY +G A+
Sbjct: 571 YSVADDNAIE-NALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAM 629
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ M+ G + + FT VL AC+ + L+ G VH A + ++ VG+AL+DM
Sbjct: 630 DLVWPMMQRGQKL-DGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDM 688
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YAKCG I+ A F + R+I SWN+MI+G A HG+ AL +F +MK + PD VTF
Sbjct: 689 YAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTF 748
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
VG+LSAC+H+GLV +G+ +F+SM + Y + P+IEH+ CM DLLGRAG + + F++ MP
Sbjct: 749 VGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTMP 808
Query: 412 MEPDAVIWTSLLGAC--RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
M+P+ +IW ++LGAC +N E+ + A + LIELEP+N N+V+LSN++ G W+DV
Sbjct: 809 MDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDV 868
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++AMR +K GCS + D V F + D+ HPE E IY L+ L +R GYV
Sbjct: 869 VEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELMNKIRDAGYV 928
Query: 530 P 530
P
Sbjct: 929 P 929
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 213/445 (47%), Gaps = 29/445 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP+ N +W+ + +GY+ + LF + + P NHF + +R+C
Sbjct: 77 ARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLP-NHFAVGSALRACQ 135
Query: 64 KAGA--VREGEQVHCVAAKRGFKWNSFLCTALIEMYS-AKGSVGDAYKVFGEMPERNVVV 120
+ G+ ++ G Q+H K + L L+ MYS GS+ DA++VF E+ RN V
Sbjct: 136 QCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVT 195
Query: 121 WTAMISAYISCGDVGSGRRL----------LDLAPERDVVMWSIVISGYIESGDMVSARE 170
W ++IS Y GD S +L L+L P + + + + +V +
Sbjct: 196 WNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQ 255
Query: 171 LFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ ++ RD+ + L+NG+A G + + +F++M +RN + N L+ G AR +
Sbjct: 256 MLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQ 315
Query: 227 FSDALEAFKQMLVEGDVVP-NDFTLVAVLLACSRLGALDMGKW----VHVYAESIGY-KG 280
+A + FK+M D+V N +LV +L + L GK VH Y G
Sbjct: 316 GEEAAKVFKEM---KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDA 372
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ +GNAL++MY KC I++A VF + +D +SWN+MI+GL + +A+S F MK
Sbjct: 373 RISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMK 432
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+ P + + LS+C+ +G + G + + + + L +
Sbjct: 433 RNGMVPSNFSVISTLSSCSSLGWLTLG-RQIHGEGFKWGLDLDVSVSNALLTLYAETDSI 491
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGA 425
++ +MP E D V W S +GA
Sbjct: 492 NECQKVFFQMP-EYDQVSWNSFIGA 515
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 203/422 (48%), Gaps = 37/422 (8%)
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+ ++ + +H K GF + F C LI +Y G++ A K+F EMP++N+V W+ +
Sbjct: 36 SSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCL 95
Query: 125 ISAYI-------SC----GDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
IS Y +C G + SG A + S I+ G + A
Sbjct: 96 ISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHA--FIC 153
Query: 174 KMPN-RDVMSWNTLLNGYAN-SGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
K+P D++ N L++ Y++ SG + +VF+E+ RN +WN +I Y R G A
Sbjct: 154 KLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAF 213
Query: 232 EAFKQMLVEG---DVVPNDFTLVAVLLACSRLG--ALDMGKWVHVYAESIGYKGNMFVGN 286
+ F M +EG ++ PN++TL +++ A L L + + + E G+ +++VG+
Sbjct: 214 KLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGS 273
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL++ +A+ G+++ A +F + R+ ++ N ++ GLA +A +F +MK+ E
Sbjct: 274 ALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVE-I 332
Query: 347 DGVTFVGILSACTHMGLVRDG---------FLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+ + V +LS T +++G +L+ +VD +I + ++ G+
Sbjct: 333 NSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVD-----ARISIGNALVNMYGKC 387
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
+D A S + MP D V W S++ ++ E A F H ++ P+NF ++S
Sbjct: 388 TAIDNACSVFQLMP-SKDTVSWNSMISGLDHNERFEEAVSCF-HTMKRNGMVPSNFSVIS 445
Query: 458 NI 459
+
Sbjct: 446 TL 447
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 200/439 (45%), Gaps = 22/439 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAA----PLNHFTL-PIV 58
A +VFD++ N+ TWN++ + Y LF+ M P N +TL +V
Sbjct: 181 AHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRP-NEYTLCSLV 239
Query: 59 VRSCSKAG-AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+CS A + EQ+ K GF + ++ +AL+ ++ G + A +F +M +RN
Sbjct: 240 TAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRN 299
Query: 118 VVVWTAMIS--AYISCGDVGSG-----RRLLDLAPERDVVMWSIV--ISGYIE---SGDM 165
V ++ A G+ + + L+++ E VV+ S S E G
Sbjct: 300 AVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQE 359
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
V A + + + N L+N Y + + VF+ MP ++ SWN +I G N
Sbjct: 360 VHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNE 419
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
RF +A+ F M G +VP++F++++ L +CS LG L +G+ +H G ++ V
Sbjct: 420 RFEEAVSCFHTMKRNG-MVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVS 478
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH-GNTADALSLFDQMKNSRE 344
NAL+ +YA+ I VF + D +SWN+ I LA + + AL F +M +
Sbjct: 479 NALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGW 538
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+P+ VTF+ IL+A + ++ G +++ YS+ + G+ ++
Sbjct: 539 RPNRVTFINILAAVSSFSVLGLGH-QIHALILKYSVADDNAIENALLAFYGKCEQMEDCE 597
Query: 405 SFVRKMPMEPDAVIWTSLL 423
+M D V W S++
Sbjct: 598 IIFSRMSERRDEVSWNSMI 616
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 157/319 (49%), Gaps = 28/319 (8%)
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+L+ DV NTL+N Y G++ S K+F+EMP++N+ SW+ LI GY +N +
Sbjct: 48 QLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDE 107
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA--LDMGKWVHVYAESIGYKGNMFVGNA 287
A FK ++ G ++PN F + + L AC + G+ + +G +H + + +M + N
Sbjct: 108 ACSLFKGVISSG-LLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNV 166
Query: 288 LIDMYAKC-GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS---- 342
L+ MY+ C G I+ A VF+ + R+ ++WN++I+ G+ A LF M+
Sbjct: 167 LMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL 226
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL--------- 393
+P+ T +++A L G + + M + +IE G + DL
Sbjct: 227 NLRPNEYTLCSLVTAAC--SLADCGLVLLEQM------LTRIEKSGFLRDLYVGSALVNG 278
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPAN 452
R GL+D A ++M + +AV L+ G R H+ E A++ F+ + +L N +
Sbjct: 279 FARYGLMDCAKMIFKQM-YDRNAVTMNGLMVGLARQHQGEEAAKV-FKEMKDLVEINSES 336
Query: 453 FVMLSNIYKDLGRWQDVAR 471
V+L + + + ++ R
Sbjct: 337 LVVLLSTFTEFSNLKEGKR 355
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 153/333 (45%), Gaps = 16/333 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTE-SHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ +KVF +MPE + +WN+ + E S + F EM +A P N T ++
Sbjct: 491 INECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRP-NRVTFINIL 549
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNV 118
+ S + G Q+H + K ++ + AL+ Y + D +F M E R+
Sbjct: 550 AAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDE 609
Query: 119 VVWTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVIS-----GYIESGDMVSAR 169
V W +MIS Y+ G + L + + D ++ V+S +E G V A
Sbjct: 610 VSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHAC 669
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ + + DV+ + L++ YA G + + FE MP RN+YSWN +I GYAR+G
Sbjct: 670 AVRACLES-DVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQK 728
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNAL 288
AL+ F +M G P+ T V VL ACS +G +D G K E G + + +
Sbjct: 729 ALKIFTRMKQHGQ-SPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCM 787
Query: 289 IDMYAKCGVIESAVDVFNCLDRR-DIISWNTMI 320
+D+ + G ++ D + +I+ W T++
Sbjct: 788 VDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVL 820
>Medtr5g095690.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:41831683-41828172 | 20130731
Length = 811
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/537 (35%), Positives = 299/537 (55%), Gaps = 12/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD + + +W M Y+ + + + LF +M P N+FT+ ++SC
Sbjct: 190 ARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKP-NNFTISGALKSCL 248
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A G+ VH A K + + F+ AL+E+Y+ G + DA ++F EMP+ +++ W+
Sbjct: 249 GLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSL 308
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP------- 176
MI+ Y L + VV + + +++ + +L ++
Sbjct: 309 MIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFG 368
Query: 177 -NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
N +V N +++ YA G++ + K+FEE+P+RN +WN +I GY + G A+ F
Sbjct: 369 LNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFT 428
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
ML E D+ P + T +VL A + L AL+ G +H Y + V N+LIDMYAKC
Sbjct: 429 HML-EHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKC 487
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I A F+ +++RD +SWN MI G +MHG + +AL+LFD M+++ +P+ +TFVG+L
Sbjct: 488 GRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVL 547
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC++ GL+ G +F+SM Y I P IEHY CM LLGR G D+A+ + ++ +P
Sbjct: 548 SACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPS 607
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
++W +LLGAC HK V++ + QH++E+EP + A V+LSN+Y GRW +VA ++
Sbjct: 608 VMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKY 667
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSL-DERHPETESIYRALRGLTMLLRLHGYVPN 531
M+ RK PG S +E N VV ++S+ D HP+ + I L L R GYVP+
Sbjct: 668 MQKKKVRKEPGLSWVE-NQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPD 723
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 219/444 (49%), Gaps = 32/444 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD+MP+ NT ++ + GYS + + + +N F +++
Sbjct: 89 ASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGH-EVNPFVFTTLLKLLV 147
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+H K G ++F+ TALI+ YS +G+V A VF ++ +++V WT
Sbjct: 148 SMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTG 207
Query: 124 MISAYI-SCG-----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP- 176
M++ Y +C + + R++ P + ISG ++S + A + +
Sbjct: 208 MVACYAENCFYEESLQLFNQMRIMGYKPN------NFTISGALKSCLGLEAFNVGKSVHG 261
Query: 177 -------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ D+ LL YA SG++ +++FEEMP+ ++ W+++I YA++ R +
Sbjct: 262 CALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKE 321
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL+ F +M + VVPN+FT +VL AC+ +LD+GK +H G N+FV NA++
Sbjct: 322 ALDLFLRMR-QTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIM 380
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
D+YAKCG IE+++ +F L R+ ++WNT+I G G+ A++LF M QP V
Sbjct: 381 DVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEV 440
Query: 350 TFVGILSACTHMGLVRDGF----LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
T+ +L A + + G L ++M + +++ + D+ + G ++ A
Sbjct: 441 TYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA-----NSLIDMYAKCGRINDARL 495
Query: 406 FVRKMPMEPDAVIWTSLLGACRTH 429
KM + D V W +++ H
Sbjct: 496 TFDKMN-KRDEVSWNAMICGYSMH 518
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%), Gaps = 5/182 (2%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ + N LLN Y S + K+F+EMP+ N S+ L GY+R+ +F AL ++
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 239 VEG-DVVPNDFTLVAVLLACSRLGALDMGKW-VHVYAESIGYKGNMFVGNALIDMYAKCG 296
EG +V P FT + LL L L W +H +G+ + FVG ALID Y+ G
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHL---CWTLHACVYKLGHHADAFVGTALIDAYSVRG 185
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
++ A VF+ + +D++SW M+ A + ++L LF+QM+ +P+ T G L
Sbjct: 186 NVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALK 245
Query: 357 AC 358
+C
Sbjct: 246 SC 247
>Medtr7g037430.1 | pentatricopeptide (PPR) repeat protein | LC |
chr7:13795126-13792268 | 20130731
Length = 952
Score = 338 bits (866), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/571 (33%), Positives = 303/571 (53%), Gaps = 45/571 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ VFD MP N TWN++ + Y + + +F EM P + + ++ +CS
Sbjct: 296 AQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKP-DPMAMSSILPACS 354
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ ++ G+ +H A K G + F+CTAL+ +Y+ V +A VF MP RNVV W +
Sbjct: 355 QLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNS 414
Query: 124 MISAYISCG-----------------------------------DVGSGRRLLDLAPER- 147
+ S Y++CG D+ SG+ + A
Sbjct: 415 LSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHG 474
Query: 148 ---DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
DV + + ++S Y + + A+ +FD +P+R+V SWN +L Y + + +F
Sbjct: 475 MVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFS 534
Query: 205 EMPERNV----YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+M V +W+V+IGG +N R +A+E F++M G P++ T+ ++L ACS
Sbjct: 535 QMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMG-FKPDETTIYSILRACSLS 593
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
L MGK +H Y ++ NAL+DMYAKCG + + +VF+ + +D+ SWNTMI
Sbjct: 594 ECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFSWNTMI 653
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
MHGN +ALSLF++M S +PD TF +LSAC+H LV +G F SM + +
Sbjct: 654 FANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLV 713
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
P+ EHY C+ D+ RAG L++A F+++MPMEP A+ W + L CR +KNVE+A+++ +
Sbjct: 714 EPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAK 773
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
L E++P AN+V L NI W + ++++ M++ G K PGCS + V F
Sbjct: 774 KLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFV 833
Query: 501 SLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ D+ + E++ IY L L ++ GY P+
Sbjct: 834 AGDKSNMESDKIYNFLDELFAKIKAAGYKPD 864
Score = 169 bits (427), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 134/523 (25%), Positives = 239/523 (45%), Gaps = 27/523 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM--NRAAAAPLNHFTLPIVVRS 61
AR+VFD + + TWN++ Y + + +F +M N+ A PL T+ ++
Sbjct: 94 ARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPL---TVSSILPG 150
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CS ++ G+++H + G + F+ +A + Y+ V +A VF MP R+VV W
Sbjct: 151 CSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTW 210
Query: 122 TAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FD 173
++ S Y++CG G R ++ + D V S ++S + D+ S + +
Sbjct: 211 NSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+V N L+N Y + V + VF+ MP RNV +WN L Y G L
Sbjct: 271 HGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNV 330
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++M + G V P+ + ++L ACS+L L GK +H +A G ++FV AL+++YA
Sbjct: 331 FREMGLNG-VKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYA 389
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
C + A VF+ + R++++WN++ + G L++F +M + +PD VT +
Sbjct: 390 NCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVTMLS 449
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
IL AC+ + ++ G + V H ++ + + L + + +A +P
Sbjct: 450 ILHACSDLQDLKSGKVIHGFAVRH-GMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHR 508
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHL--IELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+ W +L A T+K E F + E++ V++ K+ R ++
Sbjct: 509 -EVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKN-SRIEEAME 566
Query: 472 LKIAMRDTGFRK--------LPGCSVIECNDSVVEFYSLDERH 506
+ M+ GF+ L CS+ EC E + RH
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRH 609
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 176/373 (47%), Gaps = 11/373 (2%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
V ++C+ + + +Q H A + G + + A I Y V A +VF ++ R+
Sbjct: 46 VAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEGARRVFDDLVARD 105
Query: 118 VVVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
VV W ++ + Y++CG G R++ + + + S ++ G + D+ S +E+
Sbjct: 106 VVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHG 165
Query: 174 KMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ DV + +N YA V + VF+ MP R+V +WN L Y G
Sbjct: 166 FVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQK 225
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
L F++M+++G V P+ T+ +L ACS L L GK +H +A G N+FV NAL+
Sbjct: 226 GLNVFREMVLDG-VKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALV 284
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
++Y C + A VF+ + R++I+WN++ + G L++F +M + +PD +
Sbjct: 285 NLYESCLCVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPM 344
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
IL AC+ + ++ G V H ++ + + +L + +A +
Sbjct: 345 AMSSILPACSQLKDLKSGKTIHGFAVKH-GMVEDVFVCTALVNLYANCLCVREAQTVFDL 403
Query: 410 MPMEPDAVIWTSL 422
MP + V W SL
Sbjct: 404 MPHR-NVVTWNSL 415
>Medtr3g011950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3128021-3130773 | 20130731
Length = 810
Score = 337 bits (863), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 286/537 (53%), Gaps = 11/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+F +MPE + WN + GY+ R + L +M + TL V+ + +
Sbjct: 189 AYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKA-DSITLVSVLPAVA 247
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+R G VH A + GF + TAL++MY G V VF M +NVV W
Sbjct: 248 DVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEVETGRLVFQRMSSKNVVSWNT 307
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSAR---ELFDKMP 176
+I G+ E V ++ + G + + GD+ + L D+M
Sbjct: 308 VIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMK 367
Query: 177 -NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ +V N+L++ Y+ V VF+ + + +WN +I GYA+NG ++AL F
Sbjct: 368 LSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFC 427
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M +G + P+ FT V+V+ A + L KW+H A N+FV AL+DMYAKC
Sbjct: 428 TMQSQG-IKPDSFTFVSVITALADLSVTRQAKWIHGLAIRTNMDTNVFVATALVDMYAKC 486
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGI 354
G IE+A ++F+ + R +I+WN MI+G HG AL LFD M+N +P+ +TF+ +
Sbjct: 487 GAIETARELFDMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSV 546
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+SAC+H G V +G YF+ M + Y + P ++HYG M DLLGRAG LD A F+ +MP++P
Sbjct: 547 ISACSHSGFVEEGLYYFKIMKEGYGLEPSMDHYGAMVDLLGRAGKLDDAWKFIHEMPIKP 606
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+ ++LGAC+ HKN+E+ E A L EL+P +++++N+Y W VA+++
Sbjct: 607 GITVLGAMLGACKIHKNIELGEKAADRLFELDPDEGGYYMLVANMYASASMWDKVAKVRT 666
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
AM G K PGCS++E + V FYS HP+++ IY L L +R GYVP+
Sbjct: 667 AMEKKGLHKTPGCSLVEWRNEVHAFYSGSTNHPQSKRIYAFLETLGDEIRAAGYVPD 723
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/471 (26%), Positives = 220/471 (46%), Gaps = 20/471 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A +VFD + ++ + GY S + + F M P+ + +++
Sbjct: 85 INEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQNDEVEPVV-YDFTYLLQ 143
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C + +++G +VH + K GF+ N F T+++ +Y+ + DAYK+F MPER++V
Sbjct: 144 LCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVC 203
Query: 121 WTAMISAYISCGDVGSGRRL-LDL---APERDVVMWSIVISGYIESGDMVSAREL----- 171
W +++ Y G +L LD+ + D + V+ + + R +
Sbjct: 204 WNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLRIGRSVHGYAV 263
Query: 172 ---FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
FD M N LL+ Y G+V + VF+ M +NV SWN +I G A+NG
Sbjct: 264 RLGFDSMVNVST----ALLDMYFKCGEVETGRLVFQRMSSKNVVSWNTVIDGLAQNGESE 319
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+A F +M E V P + +++ L ACS LG L+ GK+VH + + N+ V N+L
Sbjct: 320 EAFATFLKMF-EEKVEPTNVSMMGALHACSNLGDLERGKFVHRLLDQMKLSSNVSVMNSL 378
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
I MY+KC ++ A VF+ L+ + ++WN MI G A +G +AL+LF M++ +PD
Sbjct: 379 ISMYSKCKRVDIAASVFDNLEGKTNVTWNAMILGYAQNGCVNEALNLFCTMQSQGIKPDS 438
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
TFV +++A + + R + + ++ + + D+ + G ++ A
Sbjct: 439 FTFVSVITALADLSVTRQA-KWIHGLAIRTNMDTNVFVATALVDMYAKCGAIETARELF- 496
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
M E + W +++ TH + A F + P + LS I
Sbjct: 497 DMMQERHVITWNAMIDGYGTHGLGKAALDLFDDMQNEASLKPNDITFLSVI 547
Score = 140 bits (354), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 180/365 (49%), Gaps = 11/365 (3%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
++ E Q+ K GF T LI ++ G++ +A +VF + + V++ ++
Sbjct: 49 SISELHQILPHIIKNGFYNQHLFQTKLISLFCKFGTINEALRVFDSVETKLDVLYHTLLK 108
Query: 127 AYIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE----LFDKMPNR 178
Y+ + +R+ + E V ++ ++ E+ D+ E L
Sbjct: 109 GYVKNSSLSESLSFFKRMQNDEVEPVVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFES 168
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
++ + +++N YA + K+F MPER++ WN ++ GYA+NG AL+ M
Sbjct: 169 NLFAMTSVVNLYAKCRKIDDAYKMFVRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQ 228
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+G + TLV+VL A + + L +G+ VH YA +G+ + V AL+DMY KCG +
Sbjct: 229 EDGKKA-DSITLVSVLPAVADVKGLRIGRSVHGYAVRLGFDSMVNVSTALLDMYFKCGEV 287
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E+ VF + ++++SWNT+I+GLA +G + +A + F +M + +P V+ +G L AC
Sbjct: 288 ETGRLVFQRMSSKNVVSWNTVIDGLAQNGESEEAFATFLKMFEEKVEPTNVSMMGALHAC 347
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+++G + G + ++D + + + + + +D A S + + + V
Sbjct: 348 SNLGDLERG-KFVHRLLDQMKLSSNVSVMNSLISMYSKCKRVDIAASVFDNLEGKTN-VT 405
Query: 419 WTSLL 423
W +++
Sbjct: 406 WNAMI 410
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 154/345 (44%), Gaps = 27/345 (7%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ + G + +VF+ + + ++ L+ GY +N S++L FK+M + +V P
Sbjct: 75 LISLFCKFGTINEALRVFDSVETKLDVLYHTLLKGYVKNSSLSESLSFFKRMQND-EVEP 133
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ +L C L G VH G++ N+F +++++YAKC I+ A +F
Sbjct: 134 VVYDFTYLLQLCGENFDLKKGMEVHGMLIKNGFESNLFAMTSVVNLYAKCRKIDDAYKMF 193
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ RD++ WNT++ G A +G AL L M+ ++ D +T V +L A + +R
Sbjct: 194 VRMPERDLVCWNTVVAGYAQNGFARKALKLVLDMQEDGKKADSITLVSVLPAVADVKGLR 253
Query: 366 DG--------FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
G L F SMV+ + + D+ + G ++ ++M + V
Sbjct: 254 IGRSVHGYAVRLGFDSMVNVST---------ALLDMYFKCGEVETGRLVFQRMS-SKNVV 303
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY--KDLGRWQDVARLKIA 475
W +++ + E A F + E E P N M+ ++ +LG D+ R K
Sbjct: 304 SWNTVIDGLAQNGESEEAFATFLKMFE-EKVEPTNVSMMGALHACSNLG---DLERGKFV 359
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
R KL S + +S++ YS +R S++ L G T
Sbjct: 360 HRLLDQMKLS--SNVSVMNSLISMYSKCKRVDIAASVFDNLEGKT 402
>Medtr4g131300.1 | PPR containing plant-like protein | HC |
chr4:54775340-54772788 | 20130731
Length = 734
Score = 336 bits (861), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 192/537 (35%), Positives = 290/537 (54%), Gaps = 10/537 (1%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MPE NT +W M +GY+ ++ V +F M R N F L V+ + +
Sbjct: 172 ARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQ-NEFALTSVLSALT 230
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V G QVH +A K G + AL+ MY+ GS+ DA + F ++N + W+A
Sbjct: 231 SDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSA 290
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARE-------LFDKM 175
M++ Y GD +L + V+ + G I + D+ + E F
Sbjct: 291 MVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLG 350
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ + +++ YA G + K FE + + +V W +I GY +NG + L +
Sbjct: 351 FGLQLYVLSAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYG 410
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M +E V+PN+ T+ +VL ACS L ALD GK +H G+K + +G+AL MY KC
Sbjct: 411 KMQME-RVIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKC 469
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ +F + RD+ISWN MI+GL+ +G+ AL LF++M +PD VTFV +L
Sbjct: 470 GSLDDGYLIFWRMPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLL 529
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC+HMGLV G+ YF+ M D ++I P +EHY CM D+L RAG L++A F+ ++
Sbjct: 530 SACSHMGLVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHG 589
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W LLGAC+ H+N E+ A + L+EL + +V+LS+IY LG ++V R++
Sbjct: 590 LCLWRILLGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRI 649
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
M+ G K PGCS IE V F D +HP+ + I L LT L+ GY P L
Sbjct: 650 MKARGVNKEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLMIDEGYQPLL 706
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/478 (27%), Positives = 229/478 (47%), Gaps = 17/478 (3%)
Query: 1 MGHARKVFDKMPE--PNTATWNAMFNGYSLTESHRD---VVVLFAEMNRAAAAPLNHFTL 55
+ HA +FD + + + +WN++ N +S S + LF M RA N TL
Sbjct: 62 LSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTL 121
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
V + S V G+Q H VA K G + ++ ++L+ MY G V DA K+F MPE
Sbjct: 122 AGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPE 181
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVM----WSIVISGYIESGDMVSAREL 171
RN V W MIS Y S + +L + + + V+S + + R++
Sbjct: 182 RNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQV 241
Query: 172 FDKMPNRDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+++ N L+ YA G + + FE ++N +W+ ++ GYA+ G
Sbjct: 242 HSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDS 301
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
AL+ F +M G V+P++FTLV V+ ACS L A+ GK +H +A +G+ ++V +A
Sbjct: 302 DKALKLFNKMHSSG-VLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSA 360
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
++DMYAKCG + A F C+ + D++ W ++I G +G+ L+L+ +M+ R P+
Sbjct: 361 VVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPN 420
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+T +L AC+ + + G + + Y ++ ++ + + G LD
Sbjct: 421 ELTMASVLRACSSLAALDQG-KQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIF 479
Query: 408 RKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+MP D + W +++ G + + EL + L+E +P FV L + +G
Sbjct: 480 WRMP-SRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 122/249 (48%), Gaps = 15/249 (6%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSD---ALEAFKQML 238
NT LN YA + + +F+ + + ++ SWN LI +++N S A+ F++M+
Sbjct: 50 NTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMM 109
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+V+PN TL V A S L + GK H A G G+++VG++L++MY K G +
Sbjct: 110 RANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFV 169
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
A +F+ + R+ +SW TMI+G A A+ +F+ M+ E + +LSA
Sbjct: 170 FDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLSA- 228
Query: 359 THMGLVRDGFLYFQSMVDHYSI----IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L D F+Y V +I + + + + + G LD AV + +
Sbjct: 229 ----LTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVR-TFEFSGDK 283
Query: 415 DAVIWTSLL 423
+++ W++++
Sbjct: 284 NSITWSAMV 292
>Medtr8g086560.1 | PPR containing plant protein | HC |
chr8:35911406-35914374 | 20130731
Length = 908
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 299/534 (55%), Gaps = 13/534 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +FD++ EP+ +WN+M NG + + + +F +M ++ TL V+ +C+
Sbjct: 249 AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM-LILGVEVDLTTLVSVLVACA 307
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G + G +H K F L++MYS G++ A +VF +M + +V WT+
Sbjct: 308 NIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTS 367
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDK 174
+I+AY+ G L D + V ++ + S ++ G V + + +
Sbjct: 368 IIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNG 427
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
M + ++ N L+N YA G V VF ++P +++ SWN +IGGY++N ++ALE F
Sbjct: 428 MGS-NLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELF 486
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
M + P+D T+ VL AC+ L ALD G+ +H + GY ++ V AL+DMYAK
Sbjct: 487 LDM--QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAK 544
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG++ A +F+ + ++D+ISW MI G MHG +A+S F++M+ + +PD +F I
Sbjct: 545 CGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAI 604
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+AC+H GL+ +G+ +F SM + + P++EHY C+ DLL R G L +A F+ MP++P
Sbjct: 605 LNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKP 664
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D IW LL CR H +V++AE +H+ ELEP N +V+L+N+Y + +W++V +L+
Sbjct: 665 DTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRK 724
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
M+ GF++ PGCS IE F + + +HP+ + I L LTM ++ Y
Sbjct: 725 RMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDY 778
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 228/467 (48%), Gaps = 39/467 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
RK+FDK+ WN + + Y+ + R+ V LF +M + N +T V++
Sbjct: 147 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCVLKCF 205
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G V+E ++VH K GF N+ + +LI Y G V A+ +F E+ E +VV W
Sbjct: 206 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWN 265
Query: 123 AMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDK 174
+MI+ + G G+G ++L L E D+ V+ G++ R L
Sbjct: 266 SMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKA 325
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ +V+ NTLL+ Y+ G++ +VF +M + + SW +I Y R G +SDA+ F
Sbjct: 326 CFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLF 385
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M +G V P+ +T+ +++ AC+ +LD G+ VH Y G N+ V NALI+MYAK
Sbjct: 386 DEMQSKG-VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 444
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E A VF+ + +DI+SWNTMI G + + +AL LF M+ + +PD +T +
Sbjct: 445 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQK-QFKPDDITMACV 503
Query: 355 LSACT-----------HMGLVRDGFLYFQSMVDHYSIIPQIEHYGC-MADLLGRAGLLDQ 402
L AC H ++R G YF + H C + D+ + GLL
Sbjct: 504 LPACAGLAALDKGREIHGHILRRG--YFSDL-----------HVACALVDMYAKCGLLVL 550
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTH--KNVEIAELAFQHLIELEP 447
A +P + D + WT ++ H N I+ + +EP
Sbjct: 551 AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEP 596
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 198/426 (46%), Gaps = 14/426 (3%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
F T NA N + R+ + L + +++ LN + V++ C++ +
Sbjct: 53 FTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTK-SKSYELGLNSYC--SVLQLCAEKKS 109
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+ +G++VH V G + L L+ MY G + K+F ++ V +W ++S
Sbjct: 110 LEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSE 169
Query: 128 YISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN----RD 179
Y G+ V +++ L + ++ V+ + G + + + + +
Sbjct: 170 YAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSN 229
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
N+L+ Y G V S +F+E+ E +V SWN +I G NG + LE F QML+
Sbjct: 230 TAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLI 289
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
G V + TLV+VL+AC+ +G L +G+ +H + + + N L+DMY+KCG +
Sbjct: 290 LG-VEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLN 348
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
A +VF + I+SW ++I G +DA+ LFD+M++ +PD T I+ AC
Sbjct: 349 GATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACA 408
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
+ G S V + + + ++ + G +++A K+P++ D V W
Sbjct: 409 CSSSLDKG-RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSW 466
Query: 420 TSLLGA 425
+++G
Sbjct: 467 NTMIGG 472
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
+ +VL C+ +L+ GK VH S G + +G L+ MY CG + +F+ +
Sbjct: 96 SYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKI 155
Query: 309 DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD-- 366
+ WN +++ A GN +++SLF +M+ + TF +L +G V++
Sbjct: 156 MNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECK 215
Query: 367 ---GFLYFQSMVDHYSIIPQ-IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
G++ + +++ I Y + L D+ EPD V W S+
Sbjct: 216 RVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL--------SEPDVVSWNSM 267
Query: 423 LGAC 426
+ C
Sbjct: 268 INGC 271
>Medtr5g008600.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1841187-1847304 | 20130731
Length = 880
Score = 335 bits (859), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 183/546 (33%), Positives = 278/546 (50%), Gaps = 49/546 (8%)
Query: 34 DVVVLFAEMNRAAAAP--LNHFTLP------IVVRSCSKAGAVREGEQVHCVAAKRGFKW 85
+++ LF + NR A L+ P ++ +C + + G++VH F
Sbjct: 37 EIIELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIP 96
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAP 145
+ LI MY+ GS+ DA +F E+P++++ W MIS Y + G + R+L D P
Sbjct: 97 GIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMP 156
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNR--------------------------- 178
RD W+ VISGY+ G + A +LF M
Sbjct: 157 HRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGK 216
Query: 179 -------------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
D + W LL+ Y G + +F++M ++++ SW +I +G
Sbjct: 217 EIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDG 276
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
R + F+ ++ G V PN++T VL AC+ L A MGK VH Y +GY F
Sbjct: 277 RKKEGFSLFRDLMGSG-VRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAA 335
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
+AL+ +Y+KCG E+A VFN + R D++SW ++I G A +G AL F+ + S +
Sbjct: 336 SALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTK 395
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
PD +TFVG+LSACTH GLV G YF S+ + + ++ +HY C+ DLL R+G +A +
Sbjct: 396 PDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAEN 455
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
+ MPM+PD +W SLLG CR H N+E+AE A + L ELEP+NPA ++ LSNIY + G
Sbjct: 456 IIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGL 515
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
W + +++ M + G K PG S IE V F D HP+ I+ L L+ ++
Sbjct: 516 WTEETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKE 575
Query: 526 HGYVPN 531
GYV +
Sbjct: 576 EGYVAD 581
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 172/341 (50%), Gaps = 21/341 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
ARK+FD+MP + +WNA+ +GY + + + LF M ++ N FTL + +
Sbjct: 147 QARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAA 206
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ ++R G+++H + G + + + TAL+++Y GS+ +A +F +M ++++V WT
Sbjct: 207 AAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWT 266
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
MI G G L RD++ + + Y +G + + +L + ++V
Sbjct: 267 TMIHRCFEDGRKKEGFSLF-----RDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHG 321
Query: 183 WNT-------------LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ T L++ Y+ G+ + +VF +MP ++ SW LI GYA+NG+
Sbjct: 322 YMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM 381
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNAL 288
AL+ F+ +L G P++ T V VL AC+ G +D+G ++ H E G +
Sbjct: 382 ALQFFESLLRSG-TKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACV 440
Query: 289 IDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
ID+ A+ G + A ++ + + + D W +++ G +HGN
Sbjct: 441 IDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 111/248 (44%), Gaps = 11/248 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR +FD+M + + +W M + ++ LF ++ + P N +T V+
Sbjct: 247 LNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRP-NEYTFAGVLN 305
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A + G++VH + G+ SF +AL+ +YS G+ A +VF +MP ++V
Sbjct: 306 ACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMPRPDLVS 365
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
WT++I Y G LL + D + + V+S +G + E F +
Sbjct: 366 WTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVK 425
Query: 177 NRDVM-----SWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDA 230
+ + + +++ A SG E + + MP + + + W L+GG +G A
Sbjct: 426 EKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGNIELA 485
Query: 231 LEAFKQML 238
A K +
Sbjct: 486 ERAAKALF 493
>Medtr7g076350.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:28741911-28744729 | 20130731
Length = 786
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 192/580 (33%), Positives = 307/580 (52%), Gaps = 51/580 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV---R 60
AR++FD +P+P+ T + + + + + + +++ + P +P+ + +
Sbjct: 31 ARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP----DMPVFLAAAK 86
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ +G ++VH A + G + F+ ALI Y V A +VF ++ R+VV
Sbjct: 87 ACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVS 146
Query: 121 WTAMISAYISCG-----------------------------------DVGSGRRLLDLAP 145
WT++ S Y+ CG D+ SG+ + A
Sbjct: 147 WTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAV 206
Query: 146 ERDVVM----WSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+V+ S ++S Y + + AR +FD MP+RDV+SWN +L Y + +
Sbjct: 207 RHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFS 266
Query: 202 VFEEMPERNVY----SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+F +M V +WN +IGG NGR +A+E F++M G PN+ T+ ++L AC
Sbjct: 267 LFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMG-FKPNEITISSILPAC 325
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
S L MGK +H Y G++ AL+ MYAKCG + + +VF+ + R+D+++WN
Sbjct: 326 SFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWN 385
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
TMI AMHGN +AL LFD+M SR QP+ VTF G+LS C+H LV +G F SM
Sbjct: 386 TMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRD 445
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAEL 437
+ + P HY C+ D+ RAG L++A F++ MPMEP A W +LL ACR +KNVE+A++
Sbjct: 446 HLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKI 505
Query: 438 AFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVV 497
+ + L E+EP NP N+V L NI W + ++++I M++ G K PGCS ++ + V
Sbjct: 506 SAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVH 565
Query: 498 EFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
F D+ + E++ IY L L +++ GY P+ V Q
Sbjct: 566 TFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQ 605
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 109/242 (45%), Gaps = 3/242 (1%)
Query: 192 NSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
N GD ++F+ +P+ + + + LI +G ++A++ + L E + P+ +
Sbjct: 24 NVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSS-LQERGIKPDMPVFL 82
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
A AC+ G K VH A G ++FVGNALI Y KC +E A VF+ L R
Sbjct: 83 AAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR 142
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF 371
D++SW ++ + G + +F +M S +P+ +T IL AC + ++ G
Sbjct: 143 DVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 202
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
V H ++ + + L + + +A MP D V W +L A +K
Sbjct: 203 GFAVRH-GMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHR-DVVSWNGVLTAYFKNKE 260
Query: 432 VE 433
E
Sbjct: 261 YE 262
>Medtr2g071810.1 | PPR containing plant-like protein | HC |
chr2:30002268-30006207 | 20130731
Length = 789
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/501 (35%), Positives = 286/501 (57%), Gaps = 35/501 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR +FD+MPE N +W+AM +GY + LF +M R +N T+ I+++ C
Sbjct: 208 NARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGC 267
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G V+EG Q+H + ++ GF++ S L +I MYS G A KVF M +
Sbjct: 268 GNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNK------ 321
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
D+V W+ +ISGYI + ++ +A E+F++MP +D++S
Sbjct: 322 -------------------------DLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLIS 356
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
W ++ G+A G +G ++F+ + E++ + W VLI G+ N + +AL F +M E
Sbjct: 357 WTAMIRGFATDGRIGKAVELFDTLKEKDDFVWTVLISGFVSNEEYEEALHWFVRMSRE-Q 415
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
PN T+ +VL A + L AL+ G +H + + + ++ + N+LI YAKCG + A
Sbjct: 416 CRPNPLTISSVLSASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAY 475
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+F + +++S+N++ING A +G +ALS++ +M+N +P+ VTF+ +LSACTH G
Sbjct: 476 KIFVDVVEPNVVSYNSVINGFAQNGFGEEALSMYKRMQNESLEPNRVTFLAVLSACTHAG 535
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
L+ +G+ F +M Y I P+ +HY CM DLLGRAGLLD+A+ FVR MP+EP + +W +L
Sbjct: 536 LIEEGWNLFNTMKSRYGIEPEADHYACMVDLLGRAGLLDEAIHFVRSMPLEPHSGVWGAL 595
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L A H+ +++A+LA QH+ ELEP N +V+LSN Y G+ + ++ G +
Sbjct: 596 LAASCAHQRIDLAKLAAQHITELEPANATPYVVLSNTYSASGQKFEGDLVRKTKNLKGIK 655
Query: 483 KLPGCSVIECND---SVVEFY 500
K PGCS I D ++ FY
Sbjct: 656 KSPGCSWITIKDKALKIILFY 676
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 136/317 (42%), Gaps = 67/317 (21%)
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDV 149
C I G+V A +F M ++N+V WTAM++ Y G + + R+L D PER
Sbjct: 33 CNVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTT 92
Query: 150 VMWSIVISGYIESG-DMVSARELFDKMPNRDVMSW------------------------- 183
++ +ISGYI +G ++ A ELF +R+ +S+
Sbjct: 93 ATYNAMISGYIRNGCNVTKAYELFTSFHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPH 152
Query: 184 --------NTLLNGYANSGDVGS----FEKV----------------------------- 202
N L+NGY G++ FE V
Sbjct: 153 EFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARML 212
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+ MPERNV SW+ +I GY G F + F M EG V N T+ ++ C G
Sbjct: 213 FDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGR 272
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
+ G +H +G++ + N +I MY+ G + A VF+ + +D+++WN++I+G
Sbjct: 273 VKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGYTDMAKKVFSGMGNKDLVTWNSLISG 332
Query: 323 LAMHGNTADALSLFDQM 339
+ A +F++M
Sbjct: 333 YIYNNEVDAAYEVFERM 349
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 208/507 (41%), Gaps = 134/507 (26%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGY-----SLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
ARK+FD+MPE TAT+NAM +GY ++T+++ ++ F + N + A +
Sbjct: 80 ARKLFDEMPERTTATYNAMISGYIRNGCNVTKAY-ELFTSFHDRNEVSYAAM-------- 130
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCT-ALIEMYSAKGSVGDAYKVFGE--MPE 115
+ KA E+++ A ++ +C+ ALI Y G + +A +VF + +
Sbjct: 131 IMGLVKARKFDLAEKLYREAPH---EFRDPVCSNALINGYLKIGEMNEALRVFENVGVSK 187
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
R+VV W+A++ G + + R L D PER+VV WS +I GY+E G + LF M
Sbjct: 188 RDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFENGFGLFLDM 247
Query: 176 PNRDVMSWNT-----LLNGYANSGDVGS------------FE------------------ 200
V+ N+ ++ G N G V FE
Sbjct: 248 RREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFGY 307
Query: 201 -----KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
KVF M +++ +WN LI GY N A E F++M P
Sbjct: 308 TDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERM-------PEK-------- 352
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
D+ W A+I +A G I AV++F+ L +D
Sbjct: 353 --------DLISWT-----------------AMIRGFATDGRIGKAVELFDTLKEKDDFV 387
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF----------------VGILSACT 359
W +I+G + +AL F +M + +P+ +T + I S
Sbjct: 388 WTVLISGFVSNEEYEEALHWFVRMSREQCRPNPLTISSVLSASASLVALNEGLQIHSHVL 447
Query: 360 HMGL-----VRDGFLYFQS----MVDHYSII-----PQIEHYGCMADLLGRAGLLDQAVS 405
M L +++ + F + + D Y I P + Y + + + G ++A+S
Sbjct: 448 KMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVEPNVVSYNSVINGFAQNGFGEEALS 507
Query: 406 FVRKM---PMEPDAVIWTSLLGACRTH 429
++M +EP+ V + ++L AC TH
Sbjct: 508 MYKRMQNESLEPNRVTFLAVLSAC-TH 533
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 14/225 (6%)
Query: 153 SIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
++ IS +G++ +A +F++M +++++W +L YA +G + + K+F+EMPER
Sbjct: 34 NVKISENGRNGNVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTA 93
Query: 213 SWNVLIGGYARNG-RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
++N +I GY RNG + A E F N+ + A+++ + D+ + +
Sbjct: 94 TYNAMISGYIRNGCNVTKAYELFTSFHDR-----NEVSYAAMIMGLVKARKFDLAE--KL 146
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN--CLDRRDIISWNTMINGLAMHGNT 329
Y E+ + NALI+ Y K G + A+ VF + +RD++SW+ ++ GL G
Sbjct: 147 YREAPHEFRDPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRI 206
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
+A LFD+M + + V++ ++ GL +GF F M
Sbjct: 207 DNARMLFDRMP----ERNVVSWSAMIDGYMEKGLFENGFGLFLDM 247
>Medtr8g086040.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:35708903-35705786 | 20130731
Length = 616
Score = 333 bits (855), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 272/458 (59%), Gaps = 9/458 (1%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC---GDVGSGRRL-- 140
N FL +ALI Y+ G + +++ M NV + SA S +GS L
Sbjct: 76 NPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVSFTFSALFSLLKNPSLGSQLHLHA 135
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
D+ + + +I Y++ G + AR++FD+MP+RDV++W L+ YA SGD+ S
Sbjct: 136 FLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSAC 195
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
++F +P +++ +W ++ GY++N AL+ F++M E VV ++ TLV + AC++L
Sbjct: 196 ELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMR-EAGVVTDEITLVGAISACAQL 254
Query: 261 GALDMGKWVHVYAES--IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
G W+ AES G N+FVG+ALIDMY+KCG +E A +VF + ++ S+++
Sbjct: 255 GVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNVFSYSS 314
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
MI G A+HG A+ LF +M + +P+ VTFVG+ +AC+H G+V G F +M + Y
Sbjct: 315 MIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECY 374
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
+ P +HY CMADLLGRAG L++A+ V+ MPMEP+ +W +LLGA H N ++AE+A
Sbjct: 375 GVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIA 434
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVV- 497
+ L ELEP N N+++LS Y +W DV+R++ MR+ RK PGCS +E + ++
Sbjct: 435 SRSLFELEPDNLGNYLLLSKTYALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIH 494
Query: 498 EFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
EF++ D +HPE I +AL L L+ GY P L V
Sbjct: 495 EFFAGDVKHPEINEIKKALDDLLQRLKCTGYQPKLNSV 532
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 48/365 (13%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F ++ PN ++A+ Y+ + L+ M +P++ FT +
Sbjct: 68 LFSQVHSPNPFLYSALIRAYARNGPFHHSIRLYTSMLNNNVSPVS-FTFSALFSLLKNPS 126
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
G Q+H A GF + ++ +I MY G + A KVF EMP R+VV WT +I
Sbjct: 127 L---GSQLHLHAFLFGFVNDLYVGNTIIHMYVKFGVLDCARKVFDEMPHRDVVTWTELIV 183
Query: 127 AYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS---- 182
AY GD+ S L P +D+V W+ +++GY ++ A + F KM V++
Sbjct: 184 AYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKMREAGVVTDEIT 243
Query: 183 ------------------W-------------------NTLLNGYANSGDVGSFEKVFEE 205
W + L++ Y+ G+V VF+
Sbjct: 244 LVGAISACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKG 303
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
M E NV+S++ +I G+A +GR A++ F +ML E + PN T V + ACS G ++
Sbjct: 304 MKEMNVFSYSSMIVGFAVHGRARSAIKLFYEML-ENGIKPNHVTFVGLFTACSHAGMVEQ 362
Query: 266 GKWVH-VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGL 323
G+ + E G + D+ + G +E A+ + + + W ++
Sbjct: 363 GQQLFGAMKECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGAS 422
Query: 324 AMHGN 328
+HGN
Sbjct: 423 HIHGN 427
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 18/254 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F +P + W +M GYS + + F +M R A + TL +
Sbjct: 191 MDSACELFVGLPVKDMVAWTSMVTGYSQNAMPKKALQFFRKM-REAGVVTDEITLVGAIS 249
Query: 61 SCSKAGAVREGEQVHCVA--AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+C++ G + + +A ++ G N F+ +ALI+MYS G+V +AY VF M E NV
Sbjct: 250 ACAQLGVSGYADWIREIAESSRFGSGSNVFVGSALIDMYSKCGNVEEAYNVFKGMKEMNV 309
Query: 119 VVWTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+++MI + G S +L L+ + + V + + + +G + ++LF
Sbjct: 310 FSYSSMIVGFAVHGRARSAIKLFYEMLENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGA 369
Query: 175 MPNRDVMSWNTLLNGYANSGDV----GSFEKVF---EEMP-ERNVYSWNVLIGGYARNGR 226
M ++ + + YA D+ G EK + MP E N W L+G +G
Sbjct: 370 M--KECYGVSPTADHYACMADLLGRAGHLEKALQLVQTMPMEPNGGVWGALLGASHIHGN 427
Query: 227 FSDALEAFKQMLVE 240
D E + L E
Sbjct: 428 -PDVAEIASRSLFE 440
>Medtr4g094592.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38323846-38321575 | 20130731
Length = 628
Score = 332 bits (852), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 194/548 (35%), Positives = 303/548 (55%), Gaps = 19/548 (3%)
Query: 1 MGHARKVFD--KMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
+ +A KVF+ + N +NA+ G+ + L+ +M + FT P V
Sbjct: 80 INYALKVFNYPTHHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCV 139
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+R+C AG V E +++H + K G + + F+ +AL+ Y V DA++VF E+P R+V
Sbjct: 140 IRACGDAGDVFEVKKIHGLLFKFGLELDVFVGSALVTTYLKFWLVVDAHEVFEELPVRDV 199
Query: 119 VVWTAMISAYISCG----DVGSGRRLLD--LAPERDVVMWSIVISGYIESGDMVSARELF 172
V+W +M++ Y G +G RR+++ + P R V + I I D A F
Sbjct: 200 VLWNSMVNGYAQIGCFEEALGMFRRMVENGVVPCRYTVTGVLSIYSVIGDFDNGQAVHGF 259
Query: 173 -DKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
KM + V+ N L++ Y VFE M E++++SWN +I + R G
Sbjct: 260 LTKMGYHSSVVVLNALIDMYGKCKCASDALNVFEVMDEKDMFSWNSIISVHQRCGDHYGT 319
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY--AESIGYKG------NM 282
L+ F +ML V P+ T+ VL AC+ L AL G+ +H Y +G +G ++
Sbjct: 320 LKLFDRML-GNKVQPDLVTVTTVLPACTHLAALMHGREIHGYMIVNGLGKEGRNNDFDDV 378
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ NAL+DMYAKCG + A VF+ + +D+ SWN MI G MHG +AL F +M+ +
Sbjct: 379 LLNNALMDMYAKCGSMRDARMVFDNMTEKDVASWNIMITGYGMHGYGDEALDTFTRMRQA 438
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
+ P+ ++FVG+LSAC+H G+V++G + M Y + P +EHY C+ D+L RAG L +
Sbjct: 439 QLVPNEISFVGLLSACSHAGMVKEGLEFLAEMDSKYGVPPSVEHYTCVIDMLCRAGKLVE 498
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
A + MP + D V W +LL ACR +K+ ++AE+A +IELEP + N+V++SN+Y
Sbjct: 499 AYDLMLTMPFKADPVGWRALLAACRIYKDTDLAEIAASKVIELEPGHCGNYVLMSNVYGV 558
Query: 463 LGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTML 522
+GR++ V+ L+ MR +K PGCS IE + V F + D HP+T+ IY L LT +
Sbjct: 559 VGRYEQVSELRHTMRQQNVKKRPGCSWIELMNGVHVFLTGDRTHPQTDFIYAGLNSLTAV 618
Query: 523 LRLHGYVP 530
L+ GYVP
Sbjct: 619 LQEQGYVP 626
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 3/117 (2%)
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
T + L C++ L GK +H + G+ + ++I+MY+KC +I A+ VFN
Sbjct: 31 TCITSLQQCAQTTNLTKGKQLHTHLLKNGFFASPLAITSIINMYSKCTLINYALKVFNYP 90
Query: 309 DRRD--IISWNTMINGLAMHGNTADALSLFDQMK-NSREQPDGVTFVGILSACTHMG 362
D + ++N +I G +G + + L+ QM+ PD TF ++ AC G
Sbjct: 91 THHDKNVFAYNAIIAGFVSNGLSQHSFGLYKQMRLLGVVIPDKFTFPCVIRACGDAG 147
>Medtr8g107740.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:45554142-45556499 | 20130731
Length = 785
Score = 332 bits (852), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 185/538 (34%), Positives = 295/538 (54%), Gaps = 17/538 (3%)
Query: 4 ARKVFDKMPEPN--TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A+ +F+ + + WNAM +S H + A+M +A P N TL ++ +
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTP-NSSTLVSILPT 219
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+A A+ +G+ +H + F N L TAL++MY+ + A K+F + ++N V W
Sbjct: 220 IGQANALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCW 279
Query: 122 TAMISAYISCGDVGSGRRLLD-------LAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+AMI Y+ + L D L P + + ++ + D+ ++L
Sbjct: 280 SAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATL--ATMLRACAQLTDLKRGKKLHCH 337
Query: 175 MPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
M D N+L++ YA G + + +EM ++ S++ +I G +NG A
Sbjct: 338 MIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKA 397
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L F+QM G + P T++A+L ACS L AL G H Y G+ + + NA+ID
Sbjct: 398 LLIFRQMQSSG-IAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIID 456
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY+KCG I + ++F+ + RDIISWNTMI G +HG +ALSLF +++ +PD VT
Sbjct: 457 MYSKCGKITISREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVT 516
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+ +LSAC+H GLV +G +F SM +++I P++ HY CM DLL RAG LD+A +F+++M
Sbjct: 517 LIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRM 576
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P P+ IW +LL ACRTHKN+E+ E + + L P+ NFV++SNIY +GRW D A
Sbjct: 577 PFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAA 636
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
++ R G++K PGCS +E + + F + HP++ SI + L+ L + ++ GY
Sbjct: 637 YIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGY 694
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 192/375 (51%), Gaps = 13/375 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD++P+P+ WN M Y+ + + + L+ M + P N FT P ++++CS
Sbjct: 60 ARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTN-FTFPFLLKACS 118
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVVW 121
A++ G +H A G + ++ TAL+ MY+ G + A +F + +R++V W
Sbjct: 119 SLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAW 178
Query: 122 TAMISAY----ISCGDVGSGRRLLD--LAPERDV---VMWSIVISGYIESGDMVSARELF 172
AMI+A+ + + S ++ + P ++ +I + + G + A +
Sbjct: 179 NAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIR 238
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + V+ LL+ YA + K+F + ++N W+ +IGGY + SDAL
Sbjct: 239 NFFFDNVVLQ-TALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALA 297
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+ ML + P TL +L AC++L L GK +H + G + VGN+LI MY
Sbjct: 298 LYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY 357
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG++++AV + + +D +S++ +I+G +G AL +F QM++S P T +
Sbjct: 358 AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMI 417
Query: 353 GILSACTHMGLVRDG 367
+L AC+H+ ++ G
Sbjct: 418 ALLPACSHLAALQHG 432
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF+++P+ +V WN++I YA +G F ++ + ML G V P +FT +L ACS L
Sbjct: 63 VFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLG-VTPTNFTFPFLLKACSSLQ 121
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR--RDIISWNTM 319
AL +G+ +H +A +G +++V AL+ MYAKCG + A +FN + RDI++WN M
Sbjct: 122 ALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAM 181
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I + H A + QM+ + P+ T V IL + G + ++
Sbjct: 182 IAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNF- 240
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ + D+ + LL A + + D V W++++G H ++ A +
Sbjct: 241 FFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKND-VCWSAMIGGYVLHDSISDALALY 299
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
++ + NP L+ + + + D+ R K
Sbjct: 300 DDMLCIYGLNPTP-ATLATMLRACAQLTDLKRGK 332
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 149/339 (43%), Gaps = 72/339 (21%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+F+ + + N W+AM GY L +S D + L+ +M TL ++R+C
Sbjct: 263 YARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRAC 322
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ ++ G+++HC K G ++ + +LI MY+ G + +A EM ++ V ++
Sbjct: 323 AQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYS 382
Query: 123 AMISAYISCGDV-----------GSG-----RRLLDLAP--------------------- 145
A+IS + G SG ++ L P
Sbjct: 383 AIISGCVQNGYAEKALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVR 442
Query: 146 --ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVF 203
D + + +I Y + G + +RE+FD+M NRD++SWNT
Sbjct: 443 GFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIISWNT------------------ 484
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+I GY +G +AL F+++ G + P+D TL+AVL ACS G +
Sbjct: 485 -------------MIIGYGIHGLCVEALSLFQELQALG-LKPDDVTLIAVLSACSHSGLV 530
Query: 264 DMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
GK W +++ K M ++D+ A+ G ++ A
Sbjct: 531 TEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEA 569
>Medtr4g031160.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:10600555-10597860 | 20130731
Length = 839
Score = 332 bits (850), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 179/540 (33%), Positives = 307/540 (56%), Gaps = 14/540 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFDKM E N TW M + + + + LF EM ++ + FTL ++ C+
Sbjct: 214 ARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCA 273
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G+++H + G + + +L++MY+ G V +A KVF M E NV+ WTA
Sbjct: 274 EIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTA 333
Query: 124 MISAYISCG---DVGSGRRLLDLAPERDVVMWSIVISGYIES---------GDMVSAREL 171
+++ Y+ G + + R ++ + V SG +++ G+ V + +
Sbjct: 334 LVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTI 393
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ D + N L++ YA SG + S K F+ + E+N+ S V+ ++ +
Sbjct: 394 KLGLSAIDCVG-NGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQ 452
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ +++ G V + FT ++L + +G + G+ +H IG++ ++ V NALI M
Sbjct: 453 DLDREVEYVGSGVSS-FTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISM 511
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG E+A+ VFN ++ ++I+W ++ING A HG + AL LF M + +P+ VT+
Sbjct: 512 YSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTY 571
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +LSAC+H+GL+ + + +F SM D++ I+P++EHY CM DLLGR+GLL +A+ F+ MP
Sbjct: 572 IAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMP 631
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+ DA++W + LG+CR H+N ++ E A + ++E EP +PA +++LSN+Y GRW+DVA
Sbjct: 632 FDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAA 691
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
++ M+ K G S IE + V +F+ D HP+ + IY L L + ++ GYVPN
Sbjct: 692 IRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPN 751
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 124/503 (24%), Positives = 215/503 (42%), Gaps = 40/503 (7%)
Query: 4 ARKVFDKM--PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A +F M + + +++++ + ++ + V +F ++ N + V+R+
Sbjct: 106 AFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRA 165
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTA--LIEMYSAKGSVGD---AYKVFGEMPER 116
C K G + G + K G+ ++S +C LI+M+ S+ D A KVF +M E+
Sbjct: 166 CLKGGFFKTGLCLFGFVLKTGY-FDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREK 224
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIE-----SGDMVSAREL 171
NVV WT MI+ G +DL E +V SGY+ +G + E+
Sbjct: 225 NVVTWTLMITRL---AQYGYNDEAIDLFLEM------LVSSGYVPDRFTLTGLISVCAEI 275
Query: 172 FDKMPNRDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
+++ SW +L++ YA G V KVF+ M E NV SW L+
Sbjct: 276 QFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALV 335
Query: 219 GGYAR--NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
GY R G +A+ F ML++G V PN FT VL AC+ L D G+ VH +
Sbjct: 336 NGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKL 395
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G VGN L+ +YAK G +ESA F+ L ++++S + + N L
Sbjct: 396 GLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLD 455
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+++ T+ +LS +G + G +MV + + + +
Sbjct: 456 REVEYVGSGVSSFTYASLLSGAACIGTIGKG-EQIHAMVVKIGFRTDLSVNNALISMYSK 514
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK-NPANFVM 455
G + A+ M + + + WTS++ H A F +++E K N ++
Sbjct: 515 CGNKEAALQVFNDME-DCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIA 573
Query: 456 LSNIYKDLGRWQDVARLKIAMRD 478
+ + +G + + +MRD
Sbjct: 574 VLSACSHVGLIDEAWKHFTSMRD 596
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 157/326 (48%), Gaps = 18/326 (5%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T ++++ C + G+ +H ++ L +LI +YS A+ +F M
Sbjct: 54 TSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSM 113
Query: 114 --PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERD----------VVMWSIVISGYIE 161
+R+VV ++++IS + + + + D +D V+ + + G+ +
Sbjct: 114 ENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFK 173
Query: 162 SGDMVSARELFDKMPNRDVMSWNTLLNGYANS---GDVGSFEKVFEEMPERNVYSWNVLI 218
+G + L + V L++ + D+ S KVF++M E+NV +W ++I
Sbjct: 174 TGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLADLESARKVFDKMREKNVVTWTLMI 233
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
A+ G +A++ F +MLV VP+ FTL ++ C+ + L +GK +H + G
Sbjct: 234 TRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGL 293
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN--TADALSLF 336
++ VG +L+DMYAKCG+++ A VF+ + +++SW ++NG G +A+ +F
Sbjct: 294 VLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALVNGYVRGGGGYEREAMRMF 353
Query: 337 DQM-KNSREQPDGVTFVGILSACTHM 361
M P+ TF G+L AC +
Sbjct: 354 SNMLLQGGVAPNCFTFSGVLKACASL 379
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 11/253 (4%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEM--PERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
D + N+L+ Y+ S D + +F+ M +R+V S++ +I +A N A+E F Q
Sbjct: 86 DTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQ 145
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAK- 294
+L++ V PN++ AV+ AC + G G + + GY ++ VG LIDM+ K
Sbjct: 146 LLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKG 205
Query: 295 CGV--IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTF 351
C + +ESA VF+ + +++++W MI LA +G +A+ LF +M +S PD T
Sbjct: 206 CSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTL 265
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC-MADLLGRAGLLDQAVSFVRKM 410
G++S C + + G S V ++ + GC + D+ + GL+ +A M
Sbjct: 266 TGLISVCAEIQFLSLG-KELHSWVIRSGLVLDL-CVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 411 PMEPDAVIWTSLL 423
E + + WT+L+
Sbjct: 324 R-EHNVMSWTALV 335
>Medtr4g086490.1 | PPR containing plant protein | HC |
chr4:33903624-33910415 | 20130731
Length = 1183
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/538 (34%), Positives = 296/538 (55%), Gaps = 21/538 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +FD++ EP+ +WN+M NG + + + +F +M ++ TL V+ + +
Sbjct: 524 AHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM-LILGVEVDLTTLVSVLVAWA 582
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G + G +H K F L++MYS G++ A +VF +M + +V WT+
Sbjct: 583 NIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTS 642
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
I+AY+ G L D + V ++ + + S+ DK RDV S+
Sbjct: 643 TIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSS---LDK--GRDVHSY 697
Query: 184 -------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
N L+N YA G V VF ++P +++ SWN +IGGY++N ++A
Sbjct: 698 VIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEA 757
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
LE F M + P+D T+ VL AC+ L ALD G+ +H + GY ++ V AL+D
Sbjct: 758 LELFLDM--QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVD 815
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MYAKCG++ A +F+ + ++D+ISW MI G MHG +A+S F++M+ + +PD +
Sbjct: 816 MYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 875
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F IL+AC+H GL+ +G+ +F SM + + P++EHY C+ DLL R G L +A F+ M
Sbjct: 876 FSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESM 935
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P++PD IW LL CR H +V++AE +H+ ELEP N +V+L+N+Y + +W++V
Sbjct: 936 PIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVK 995
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
+L+ M+ GF++ PGCS IE F + + +HP+ + I LR LTM ++ Y
Sbjct: 996 KLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDY 1053
Score = 200 bits (508), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 233/477 (48%), Gaps = 39/477 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
RK+FDK+ WN + + Y+ + R+ V LF +M + N +T V++
Sbjct: 422 QGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVG-NCYTFTCVLKCF 480
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G V+E ++VH K GF N+ + +LI Y G V A+ +F E+ E +VV W
Sbjct: 481 AALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWN 540
Query: 123 AMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDK 174
+MI+ + G G+G ++L L E D+ V+ + G++ R L
Sbjct: 541 SMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKA 600
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ +V+ NTLL+ Y+ G++ +VF +M + + SW I Y R G +SDA+ F
Sbjct: 601 CFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLF 660
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M +G V P+ +T+ +++ AC+ +LD G+ VH Y G N+ V NALI+MYAK
Sbjct: 661 DEMQSKG-VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAK 719
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E A VF+ + +DI+SWNTMI G + + +AL LF M+ + +PD +T +
Sbjct: 720 CGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQK-QFKPDDITMACV 778
Query: 355 LSACT-----------HMGLVRDGFLYFQSMVDHYSIIPQIEHYGC-MADLLGRAGLLDQ 402
L AC H ++R G YF + H C + D+ + GLL
Sbjct: 779 LPACAGLAALDKGREIHGHILRRG--YFSDL-----------HVACALVDMYAKCGLLVL 825
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTH--KNVEIAELAFQHLIELEPKNPANFVMLS 457
A +P + D + WT ++ H N I+ + +EP + V+L+
Sbjct: 826 AQLLFDMIP-KKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILN 881
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 195/418 (46%), Gaps = 14/418 (3%)
Query: 16 TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVH 75
T NA N + R+ + L + +++ LN + V++ C++ ++ +G++VH
Sbjct: 336 TQNQNAKINKFCEMGDLRNAIELLTK-SKSYELGLNSYC--SVLQLCAEKKSLEDGKRVH 392
Query: 76 CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD-- 133
V G + L L+ MY G + K+F ++ V +W ++S Y G+
Sbjct: 393 SVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFR 452
Query: 134 --VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN----RDVMSWNTLL 187
V +++ L + ++ V+ + G + + + + + N+L+
Sbjct: 453 ESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLI 512
Query: 188 NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND 247
Y G V S +F+E+ E +V SWN +I G NG + LE F QML+ G V +
Sbjct: 513 AAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILG-VEVDL 571
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
TLV+VL+A + +G L +G+ +H + + + N L+DMY+KCG + A +VF
Sbjct: 572 TTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVK 631
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ I+SW + I G +DA+ LFD+M++ +PD T I+ AC + G
Sbjct: 632 MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKG 691
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
S V + + + ++ + G +++A K+P++ D V W +++G
Sbjct: 692 -RDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGG 747
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
+VL C+ +L+ GK VH S G + +G L+ MY CG + +F+ +
Sbjct: 374 SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMND 433
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD----- 366
+ WN +++ A GN +++SLF +M+ + TF +L +G V++
Sbjct: 434 KVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVH 493
Query: 367 GFLYFQSMVDHYSIIPQ-IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G++ + +++ I Y + L D+ EPD V W S++
Sbjct: 494 GYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDEL--------SEPDVVSWNSMING 545
Query: 426 C 426
C
Sbjct: 546 C 546
>Medtr4g074150.2 | PPR containing plant-like protein | HC |
chr4:28198214-28202779 | 20130731
Length = 606
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 290/532 (54%), Gaps = 18/532 (3%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R + + + PNT +N + + T ++ +A+M+ P H T P++++ SK
Sbjct: 63 RLLLNTIHTPNTRLFNKLITSFPKT-----TLLSYAKMHEMGVQPDKH-TFPLLLKIFSK 116
Query: 65 AGAVREGE--QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G + V+ K GF + F+C I + G + +A KVF E PER++V WT
Sbjct: 117 NGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWT 176
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
A+I+ ++ G G R + VV+ ++ + + +V ++ V +
Sbjct: 177 ALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVET 236
Query: 183 WNTLLNG---------YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+L+G Y G KVF+EMP R+V +W V++ G+ + ++ DAL
Sbjct: 237 GRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSF 296
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++ML++ +VVPN+FTL +VL AC+ +GALD G+ VH Y E N +G +L+DMYA
Sbjct: 297 FRRMLLD-NVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYA 355
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG ++ A+ VF L +++ +W MINGLA+HG+ AL++F +M S +P+ VTF+G
Sbjct: 356 KCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLG 415
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H G V +G F+ M Y + P +EHYGCM DLLGRAG L+ A + MPM+
Sbjct: 416 VLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
P + +LLGAC +HK+ + E L+ L+ + + +L+N+Y W+ VAR++
Sbjct: 476 PSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVR 535
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
M+ T K PG S IE S+ EF + D H E +Y L L + +++
Sbjct: 536 KLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMKM 587
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 14/317 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A KVFD+ PE + W A+ NG+ + + F EM R ++ FT+ V+R
Sbjct: 157 MKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEM-RLKGVVIDGFTVASVLR 215
Query: 61 SCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ + G G++VH + G + + AL++MY G DA KVF EMP R+VV
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVV 275
Query: 120 VWTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVIS----GYIESGDMVSARE 170
WT +++ ++ C R LLD + + S++ + G ++ G +V R
Sbjct: 276 AWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVH-RY 334
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ N + + +L++ YA G V VFE + +NV++W +I G A +G A
Sbjct: 335 MEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGA 394
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGNMFVGNALI 289
L F +ML E + PND T + VL ACS G +D GK + + + K NM ++
Sbjct: 395 LNIFSRML-ESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMV 453
Query: 290 DMYAKCGVIESAVDVFN 306
D+ + G +E A + +
Sbjct: 454 DLLGRAGCLEDAKQIID 470
>Medtr4g074150.1 | PPR containing plant-like protein | HC |
chr4:28198256-28202779 | 20130731
Length = 606
Score = 331 bits (849), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 181/532 (34%), Positives = 290/532 (54%), Gaps = 18/532 (3%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R + + + PNT +N + + T ++ +A+M+ P H T P++++ SK
Sbjct: 63 RLLLNTIHTPNTRLFNKLITSFPKT-----TLLSYAKMHEMGVQPDKH-TFPLLLKIFSK 116
Query: 65 AGAVREGE--QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G + V+ K GF + F+C I + G + +A KVF E PER++V WT
Sbjct: 117 NGVPNDHLPFMVYAQVFKLGFDHDCFVCNGFISAFGCSGFMKNACKVFDESPERDIVAWT 176
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
A+I+ ++ G G R + VV+ ++ + + +V ++ V +
Sbjct: 177 ALINGFVKNGVPGEALRCFVEMRLKGVVIDGFTVASVLRAAALVGDYCFGKRVHGFYVET 236
Query: 183 WNTLLNG---------YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+L+G Y G KVF+EMP R+V +W V++ G+ + ++ DAL
Sbjct: 237 GRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVVAWTVVVAGFVQCKKYQDALSF 296
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++ML++ +VVPN+FTL +VL AC+ +GALD G+ VH Y E N +G +L+DMYA
Sbjct: 297 FRRMLLD-NVVPNEFTLTSVLSACAHVGALDQGRLVHRYMEHNDCNLNAVLGTSLVDMYA 355
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG ++ A+ VF L +++ +W MINGLA+HG+ AL++F +M S +P+ VTF+G
Sbjct: 356 KCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGALNIFSRMLESGLRPNDVTFLG 415
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H G V +G F+ M Y + P +EHYGCM DLLGRAG L+ A + MPM+
Sbjct: 416 VLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMVDLLGRAGCLEDAKQIIDNMPMK 475
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
P + +LLGAC +HK+ + E L+ L+ + + +L+N+Y W+ VAR++
Sbjct: 476 PSPGVLGALLGACVSHKDFVMGEHIGNILVNLQQNHNTGYALLANLYSTCQNWEAVARVR 535
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
M+ T K PG S IE S+ EF + D H E +Y L L + +++
Sbjct: 536 KLMKGTQVEKTPGYSWIEVAGSMHEFKAFDHSHSEFSCVYLMLENLILQMKM 587
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 155/317 (48%), Gaps = 14/317 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A KVFD+ PE + W A+ NG+ + + F EM R ++ FT+ V+R
Sbjct: 157 MKNACKVFDESPERDIVAWTALINGFVKNGVPGEALRCFVEM-RLKGVVIDGFTVASVLR 215
Query: 61 SCSKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ + G G++VH + G + + AL++MY G DA KVF EMP R+VV
Sbjct: 216 AAALVGDYCFGKRVHGFYVETGRVVLDGSVYCALVDMYFKCGYCEDACKVFDEMPYRDVV 275
Query: 120 VWTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVIS----GYIESGDMVSARE 170
WT +++ ++ C R LLD + + S++ + G ++ G +V R
Sbjct: 276 AWTVVVAGFVQCKKYQDALSFFRRMLLDNVVPNEFTLTSVLSACAHVGALDQGRLVH-RY 334
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ N + + +L++ YA G V VFE + +NV++W +I G A +G A
Sbjct: 335 MEHNDCNLNAVLGTSLVDMYAKCGCVDKALMVFENLQVKNVHTWTAMINGLAVHGDALGA 394
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGNMFVGNALI 289
L F +ML E + PND T + VL ACS G +D GK + + + K NM ++
Sbjct: 395 LNIFSRML-ESGLRPNDVTFLGVLGACSHGGFVDEGKKLFEMMRHTYHLKPNMEHYGCMV 453
Query: 290 DMYAKCGVIESAVDVFN 306
D+ + G +E A + +
Sbjct: 454 DLLGRAGCLEDAKQIID 470
>Medtr5g091640.1 | PPR containing plant-like protein | HC |
chr5:39962522-39960655 | 20130731
Length = 542
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 179/511 (35%), Positives = 282/511 (55%), Gaps = 49/511 (9%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCT-ALIEMYSAKGSVGDAYKV 109
NH L ++ C+ + Q++ K G N T AL S G++ AYK+
Sbjct: 27 NHPCLTMLQNHCT---TINHFHQIYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKL 83
Query: 110 FGEMPERNVVVWTAMI-----------------------------------SAYISCGDV 134
F MP N+ W +I AY G
Sbjct: 84 FVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHA 143
Query: 135 GSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFD----KMPNRDVMSWNTL 186
G R++ L + D + + +I Y G M AR +FD ++ + DV++ N++
Sbjct: 144 HYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSM 203
Query: 187 LNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN 246
+ GYA G++ +F++M R SWN +I GY RNG+ +ALE F +M VEG V +
Sbjct: 204 IMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEV-S 262
Query: 247 DFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
+FT+V++L AC+ LGAL GKWVH Y + ++ N+ V A+IDMY KCG +E+AV+VF
Sbjct: 263 EFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFE 322
Query: 307 CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVR 365
RR + WN++I GLAM+G+ +A F ++++S+ +PD V+F+G+L+AC H+G +
Sbjct: 323 TCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAIN 382
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
YF+ M++ Y I P I+HY C+ D+LG+AGLL++A ++ MP++PDA+IW SLL +
Sbjct: 383 KARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSS 442
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLP 485
CR H+NV+IA A Q + EL P + + +V++SN++ ++++ ++ M++ K P
Sbjct: 443 CRKHRNVQIARRAAQRVYELNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEP 502
Query: 486 GCSVIECNDSVVEFYSLDERHPETESIYRAL 516
GCS IE V EF + HP+T+ IY L
Sbjct: 503 GCSSIELYGEVHEFIAGGRLHPKTQEIYHLL 533
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 172/377 (45%), Gaps = 46/377 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A K+F +MP PN +WN + +S + + + + LF +M + P + T P V +
Sbjct: 77 INYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQP-QYLTYPSVFK 135
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG----EMPER 116
+ ++ G G Q+H K G + + F+C +I MY+ G + +A +VF E+ +
Sbjct: 136 AYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELYDH 195
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+VV +MI Y CG++ R L D R V W+ +ISGY+ +G ++ A ELF+KM
Sbjct: 196 DVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNKMQ 255
Query: 177 ---------------------------------------NRDVMSWNTLLNGYANSGDVG 197
+V+ +++ Y G V
Sbjct: 256 VEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVE 315
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+ +VFE P R + WN +I G A NG +A E F ++ + P+ + + VL AC
Sbjct: 316 NAVEVFETCPRRGLSCWNSIIIGLAMNGHEREAFEFFSKLESSKLLKPDSVSFIGVLTAC 375
Query: 258 SRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIIS 315
LGA++ + + + + ++ ++D+ + G++E A ++ + + D I
Sbjct: 376 KHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAGLLEEAEELIKGMPLKPDAII 435
Query: 316 WNTMINGLAMHGNTADA 332
W ++++ H N A
Sbjct: 436 WGSLLSSCRKHRNVQIA 452
>Medtr4g133610.1 | PPR containing plant-like protein | HC |
chr4:55889196-55891282 | 20130731
Length = 573
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 179/492 (36%), Positives = 273/492 (55%), Gaps = 5/492 (1%)
Query: 3 HARKVFDKMPE-PNTATWNAMFNGYSLTESH-RDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+A K+FD MP N W ++ + +H R + FA M++ P + FT V+
Sbjct: 65 YAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILP-SGFTFSSVLN 123
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + AV EG+QVH + GF N + TAL++MY+ G V DA VF M +R+VV
Sbjct: 124 ACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDVVA 183
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WTAMI Y G + R L D ER+ W+ +++GY GDM +A EL+D M ++
Sbjct: 184 WTAMICGYAKAGRMVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEE 243
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
++W ++ GY G+V ++F+E+P N + L+ YA+NG +A+E +++M
Sbjct: 244 VTWVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMR- 302
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
+ D +V + AC++L + M + E + V NALI M +KCG I+
Sbjct: 303 RAKIKVTDVAMVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNID 362
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT 359
A FN + RD+ +++ MI A HG + DA+ LF +M+ P+ VTFVG+L+AC+
Sbjct: 363 LAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACS 422
Query: 360 HMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
GL+ +G +FQ M Y I P EHY CM DLLGRAG L++A S +++ DA W
Sbjct: 423 TSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTW 482
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
SLL ACR + NVE+ E+A +HL E++P + N+V+L+N Y +W+ +K M
Sbjct: 483 GSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKK 542
Query: 480 GFRKLPGCSVIE 491
G +K G S I+
Sbjct: 543 GMKKPSGYSWIQ 554
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 142/335 (42%), Gaps = 44/335 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR +FD M E N+ TW M GY+ + + L+ MN T ++
Sbjct: 197 MVDARLLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGK-----EEVTWVAMIA 251
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV-V 119
K G V E ++ + N C AL+ Y+ G +A +++ +M + V
Sbjct: 252 GYGKLGNVSEARRIF---DEIPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKV 308
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVI----SGYIESGDMVSARELFDKM 175
AM+ A +C + RD+ M +++ G+ E +VS
Sbjct: 309 TDVAMVGAISACAQL------------RDIRMSNLLTYDIEEGFCEKTHIVS-------- 348
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
N L++ + G++ + F M R++Y+++ +I +A +G+ DA++ F
Sbjct: 349 --------NALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFL 400
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M EG + PN T V VL ACS G ++ G ++ + G + ++D+ +
Sbjct: 401 KMQQEG-LTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGR 459
Query: 295 CGVIESAVDVFN-CLDRRDIISWNTMINGLAMHGN 328
G +E A + D +W +++ ++GN
Sbjct: 460 AGQLEKAYSLIKENSTSADATTWGSLLAACRVYGN 494
>Medtr8g105210.1 | PPR containing plant-like protein | HC |
chr8:44370221-44373841 | 20130731
Length = 959
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 186/537 (34%), Positives = 297/537 (55%), Gaps = 12/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD MP+ +T TWN + GY + V LF M + L+ T + S
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAM-VTSGVKLDSITFASFLPSVL 390
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K+G+++ ++VH + G ++ +L +AL+++Y G V A K F + +V V TA
Sbjct: 391 KSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTA 450
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS- 182
MIS Y+ G L + +V + ++ + + +++ +L ++ + D++
Sbjct: 451 MISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKEL-HCDILKK 509
Query: 183 --------WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+++ YA SG + + F MP ++ WN++I +++NG+ A++ F
Sbjct: 510 GLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLF 569
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+QM G + +L A L AC+ AL GK +H + + + FV + LIDMY+K
Sbjct: 570 RQMGTSGTKF-DSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSK 628
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG + A VF+ +D ++ +SWN++I HG + L LF +M + QPD VTF+ I
Sbjct: 629 CGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVI 688
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+SAC H GLV +G YF+ M + Y I ++EH+ CM DL GRAG L +A ++ MP P
Sbjct: 689 MSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTP 748
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
DA W SLLGACR H NVE+A+LA +HL+EL+P N +V+LSN++ G W+ V +++
Sbjct: 749 DAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRS 808
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
M++ G +K+PG S I+ N F + D HP++ IY L+ L + LR HGYVP
Sbjct: 809 LMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQ 865
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 211/464 (45%), Gaps = 14/464 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ +FD++P + WN M NGY + F EM + P N + ++ C+
Sbjct: 231 AKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKP-NSVSFVCLLSVCA 289
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G VR G Q+H + + GF+ + + +I MYS G++ DA K+F MP+ + V W
Sbjct: 290 TRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNG 349
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMPNR- 178
+I+ Y+ G L V + SI + ++ +SG + +E+ +
Sbjct: 350 LIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHG 409
Query: 179 ---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
DV + L++ Y GDV K F++ +V +I GY NG +AL F+
Sbjct: 410 VPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFR 469
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
++ EG +VPN T+ +VL AC+ L +L +GK +H G + VG+++ MYAK
Sbjct: 470 WLIQEG-MVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKS 528
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ A F + +D + WN MI + +G A+ LF QM S + D V+ L
Sbjct: 529 GRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATL 588
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC + + G V S I + D+ + G L A S M + +
Sbjct: 589 SACANYPALYYG-KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWK-N 646
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLS 457
V W S++ A H F ++E ++P + V++S
Sbjct: 647 EVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMS 690
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 5/213 (2%)
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN LI G++ G F AL F +ML +V P+ +T V+ AC L + + K VH A
Sbjct: 145 WNWLIRGFSMLGCFDFALMFFFRML-GSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELA 203
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
S+G+ ++F+G++LI +Y G I A +F+ L RD I WN M+NG +G+ AL
Sbjct: 204 RSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSAL 263
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSMVDHYSIIPQIEHYGCMAD 392
F +M+NS +P+ V+FV +LS C G+VR G L+ + + P + + +
Sbjct: 264 GTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVAN--TIIT 321
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+ + G L A MP + D V W L+
Sbjct: 322 MYSKCGNLFDARKIFDIMP-QTDTVTWNGLIAG 353
>Medtr4g011730.1 | PPR containing plant-like protein | HC |
chr4:2939745-2937455 | 20130731
Length = 706
Score = 329 bits (844), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 312/606 (51%), Gaps = 87/606 (14%)
Query: 1 MGHARKVFDKMPEPNTA--TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
+ ARK+F P + + WN++ + V ++ +M + P + FTLP++
Sbjct: 74 ISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFGFLP-DGFTLPLI 132
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-- 116
++SCSK G+V + VHC + GFK + + L+ MY + DA KVF M R
Sbjct: 133 IKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACKVFDGMVVRSV 192
Query: 117 ---------------------------------NVVVWTAMISAYISCGDVGSGRRL--- 140
N V WT+++S++ CG L
Sbjct: 193 LSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGLFDETMELFKV 252
Query: 141 -----LDLAPERDVVMWSIV-----------ISGYIESG--------------------- 163
++++ E V+ S+ I G++ G
Sbjct: 253 MRIKGIEISGEAVAVVLSVCADMDGVQRGKEIHGFVIKGGYEDYLFVKNALIGIYGKKRE 312
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM-------PER-NVYSWN 215
D+ A ++F + N+ ++SWN L++ YA+SG +VF ++ P R NV SW+
Sbjct: 313 DLGDAHKIFSDIKNKSLVSWNALISSYADSGLCDDAYEVFLKLEKSNGHSPVRPNVISWS 372
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I G+A GR +LE F+QM + V+ N T+ +VL C+ L AL++G+ +H YA
Sbjct: 373 AVISGFASKGRLEKSLELFRQMQL-AKVMANCVTISSVLSVCAELAALNLGRELHAYAIR 431
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
N+ VGN L++MY KCGV E A VF+ + RD+ISWN++I G MHG +A+
Sbjct: 432 NLMDDNILVGNGLVNMYMKCGVFEEAHLVFDNIKGRDLISWNSLIGGYGMHGLGENAVRT 491
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
FD+M N+ +PD +TFV +LSAC+H GLV G F MV +SI P +EHY CM DLLG
Sbjct: 492 FDEMINAGLRPDKITFVAVLSACSHAGLVAAGRNLFDRMVTEFSIEPTVEHYACMVDLLG 551
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
RAGLL +A VR MP+EP+ +W +LL +CR +++ ++ E ++ L+ + +F++
Sbjct: 552 RAGLLQEAHDIVRNMPIEPNECVWGALLNSCRMYRDTDLIEEIESRILALKSEITGSFML 611
Query: 456 LSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRA 515
LSNIY D G+ +D AR++++ ++ GF+K+PG S IE V F + + H E + I+
Sbjct: 612 LSNIYADSGKREDSARVRVSAKEKGFKKIPGQSWIEVRKKVYTFSAGNVVHLEQDEIFAI 671
Query: 516 LRGLTM 521
L L +
Sbjct: 672 LNELAL 677
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 104/191 (54%), Gaps = 3/191 (1%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYS--WNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
L+ Y+ + K+F P ++ + WN +I +G ++ A++ + QM+ G
Sbjct: 64 LIATYSRFNSISEARKIFTTTPFESLSNLVWNSIIRANVSHGYYNYAVKIYHQMMKFG-F 122
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+P+ FTL ++ +CS++G++ + K VH + G+K ++ V N L+ MY K +E A
Sbjct: 123 LPDGFTLPLIIKSCSKIGSVGLCKIVHCHVLETGFKNHVHVVNELVGMYGKVRRMEDACK 182
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ + R ++SWNT+++G A + + A +F +M+ +P+ VT+ +LS+ GL
Sbjct: 183 VFDGMVVRSVLSWNTLVSGYAFNFDYVGAFRVFKRMELEGLEPNYVTWTSLLSSHARCGL 242
Query: 364 VRDGFLYFQSM 374
+ F+ M
Sbjct: 243 FDETMELFKVM 253
>Medtr1g103840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:46998568-47001126 | 20130731
Length = 782
Score = 328 bits (842), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 194/602 (32%), Positives = 309/602 (51%), Gaps = 76/602 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++FD +PEP++ +W M GY+ + F +M P FT V+ SC
Sbjct: 95 ARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQQMISDGILP-TQFTFTNVLASCV 153
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG------SVGD------------ 105
G++ G++VH K G + +L+ MY G +V D
Sbjct: 154 ATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNI 213
Query: 106 -------------AYKVFGEMPERNVVVWTAMISAYI----------------------- 129
A +F +M +R+++ W ++I+ Y
Sbjct: 214 MISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKP 273
Query: 130 ----------SCGDVGS---GRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELF 172
+C ++ S G+++ D+ + + +IS Y +SG + AR +
Sbjct: 274 DKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIV 333
Query: 173 D--KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ N +V+++ +LLNGY GDV ++F+ + R+V +W +I GYA+N DA
Sbjct: 334 ELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKCRDVVAWTAMIVGYAQNSLLKDA 393
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
LE F+ M+ EG PN +TL AVL S L +LD GK +H A + ++ VGNALI
Sbjct: 394 LELFRLMISEGPR-PNSYTLAAVLSVFSSLASLDHGKQLHAIAIRLKEVSSVSVGNALIT 452
Query: 291 MYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
MY+K G I+ A VFN + RD ++W +MI LA HG +A+ LF+ M +PD +
Sbjct: 453 MYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQHGLGNEAIELFEDMLKFNLKPDHI 512
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T+VG+LSACTH+GLV G YF M + + I P HY CM DL GRAGL+++A +F++
Sbjct: 513 TYVGVLSACTHVGLVEQGKRYFNLMKNVHHIEPTHSHYACMIDLFGRAGLIEEAYNFIKT 572
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP+EPD + W SLL ACR HKNV++A++A + L+ ++P N + L+N + G W++
Sbjct: 573 MPIEPDGIAWGSLLSACRVHKNVDLAKVAAEKLLLIDPNNSGAYSALANTHSACGEWEEA 632
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
A+++ MRD +K G S ++ + V F D HP+ ++IYR + + ++ G+
Sbjct: 633 AKVRKLMRDREVKKEQGFSWVQIQNKVHIFGVEDALHPQRDAIYRMISKIWKEIKKIGFN 692
Query: 530 PN 531
P+
Sbjct: 693 PD 694
Score = 173 bits (438), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/479 (25%), Positives = 195/479 (40%), Gaps = 104/479 (21%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T +++S K+ G +H K G + FL L+ YS S DA+++F EM
Sbjct: 12 TFVYLLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTASFNDAHRLFSEM 71
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
P+R W ++S+Y G++ + RRL D PE D V W+ +I GY + G +A F
Sbjct: 72 PQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQMGRFNTAIHTFQ 131
Query: 174 KMPN--------------------------RDVMSW-------------NTLLNGYANSG 194
+M + + V S+ N+LLN Y SG
Sbjct: 132 QMISDGILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPVANSLLNMYVKSG 191
Query: 195 D----------------------------VGSFE---KVFEEMPERNVYSWNVLIGGYAR 223
D G F+ +F++M +R++ SWN +I GY
Sbjct: 192 DSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDIISWNSIIAGYCH 251
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G S ALE F M + P+ FTL +VL AC+ L +L +GK +H Y +
Sbjct: 252 QGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLGKQIHAYIVRADIDISGA 311
Query: 284 VGNALIDMYAKCGVIE---------------------------------SAVDVFNCLDR 310
VGNALI MYAK G +E A ++F+ L
Sbjct: 312 VGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLLNGYVKIGDVNPAREIFDSLKC 371
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
RD+++W MI G A + DAL LF M + +P+ T +LS + + + G
Sbjct: 372 RDVVAWTAMIVGYAQNSLLKDALELFRLMISEGPRPNSYTLAAVLSVFSSLASLDHG-KQ 430
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
++ + + + + ++G + A ++ E D + WTS++ A H
Sbjct: 431 LHAIAIRLKEVSSVSVGNALITMYSKSGCIKDARKVFNQICTERDTLTWTSMIIALAQH 489
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 175/356 (49%), Gaps = 49/356 (13%)
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGD 164
V E P+ + V+ ++ + I D +GR R++ V + + +++ Y ++
Sbjct: 3 VLMETPKSDTFVY--LLQSAIKSRDTVTGRFIHARIIKHGLHLSVFLMNNLLNFYSKTAS 60
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
A LF +MP R SWNTLL+ YA G++ + ++F+++PE + SW +I GY +
Sbjct: 61 FNDAHRLFSEMPQRTTFSWNTLLSSYAKGGNIETARRLFDDIPEPDSVSWTTMIVGYNQM 120
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
GRF+ A+ F+QM+ +G ++P FT VL +C G+LD+GK VH + +G G + V
Sbjct: 121 GRFNTAIHTFQQMISDG-ILPTQFTFTNVLASCVATGSLDIGKKVHSFVVKLGLSGVVPV 179
Query: 285 GNALIDMYAK-------------------------------CGVIESAVDVFNCLDRRDI 313
N+L++MY K G + A+ +F+ + RDI
Sbjct: 180 ANSLLNMYVKSGDSLRVKAVFDRMRLRDKSTWNIMISMHMQSGRFDVALALFDQMTDRDI 239
Query: 314 ISWNTMINGLAMHGNTADALSLF-DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
ISWN++I G G + AL F D ++S +PD T +LSAC ++ ++ G
Sbjct: 240 ISWNSIIAGYCHQGYDSKALETFSDMFRSSSLKPDKFTLGSVLSACANLESLKLG----- 294
Query: 373 SMVDHYSIIPQIEHYGCMADLL----GRAGLLDQAVSFVR-KMPMEPDAVIWTSLL 423
+ Y + I+ G + + L ++G ++ A + V + + + +TSLL
Sbjct: 295 KQIHAYIVRADIDISGAVGNALISMYAKSGAVEVARTIVELRGTSNINVIAFTSLL 350
>Medtr7g016960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:5362710-5366096 | 20130731
Length = 654
Score = 328 bits (841), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 184/495 (37%), Positives = 266/495 (53%), Gaps = 21/495 (4%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T +++ SC + ++ +G VH G + +L T LI MY GSV A KVF E
Sbjct: 76 TFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDET 135
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERD------------VVMWSIVISGY-- 159
E+ + VW A+ A G LL L + + V+ + V+S
Sbjct: 136 REKTIFVWNAIFRAL---AMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSI 192
Query: 160 --IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
+ G + A L V TLL+ YA G V VF MP++N+ SW+ +
Sbjct: 193 CPLRKGKEIHAHILRHGYEGH-VHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVSWSAM 251
Query: 218 IGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
I YA+N ALE F+ M++E D VPN T+V+VL AC+ L AL+ GK VH Y
Sbjct: 252 IACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRR 311
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G + V N LI MY +CG I + VF+ + +RD+ISWN++I+ MHG A+ +F
Sbjct: 312 GLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKAIQIF 371
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+ M N P +TF+ +L AC+H GLV + + F+SM++ Y I P++EHY CM D+LGR
Sbjct: 372 ENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGR 431
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVML 456
A LD+A+ ++ M +P +W SLLG+CR H NVE+AE A L ELEPKN N+V+L
Sbjct: 432 ANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLL 491
Query: 457 SNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
S+IY W DV R++ + G +K+P CS IE + S++E +P+ E + L
Sbjct: 492 SHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFL 551
Query: 517 RGLTMLLRLHGYVPN 531
L ++ GYVP
Sbjct: 552 ITLLTEIKNQGYVPQ 566
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 170/351 (48%), Gaps = 36/351 (10%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA KVFD+ E WNA+F ++ D++VL+ +MN P N FT V+++C
Sbjct: 127 HACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMN-WIGIPSNRFTYTYVLKAC 185
Query: 63 SKA----GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ +R+G+++H + G++ + + T L+++Y+ G V A VFG MP++N+
Sbjct: 186 VVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNI 245
Query: 119 VVWTAMISAYISCGDVGSGRRLL--------DLAPERDVVMWSIVIS----GYIESGDMV 166
V W+AMI+ Y L D P + M S++ + +E G +V
Sbjct: 246 VSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPN-PITMVSVLQACASLAALEHGKLV 304
Query: 167 SA----RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
A R L +P NTL+ Y G++ + ++VF+ M +R+V SWN LI Y
Sbjct: 305 HAYVLRRGLDSTLP-----VLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYG 359
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK--- 279
+G A++ F+ M+ G V P+ T + VL ACS G ++ K + ES+ K
Sbjct: 360 MHGLGKKAIQIFENMINRG-VSPSYITFITVLCACSHAGLVEEAK---ILFESMLNKYRI 415
Query: 280 -GNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
M ++D+ + ++ A+++ +D + W +++ +H N
Sbjct: 416 HPRMEHYACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCN 466
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 13/330 (3%)
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NRD 179
+I + G++ +LL P + ++I+ IE + ++ ++ ++D
Sbjct: 49 LIQSLCRGGNLKQAVQLLCCEPNPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQD 108
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
L+N Y + G V KVF+E E+ ++ WN + A R D L + QM
Sbjct: 109 PYLATKLINMYCDLGSVDHACKVFDETREKTIFVWNAIFRALAMASRGEDLLVLYGQMNW 168
Query: 240 EGDVVPNDFTLVAVLLACS----RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
G + N FT VL AC + L GK +H + GY+G++ V L+D+YA+
Sbjct: 169 IG-IPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARF 227
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVG 353
G + A VF + ++I+SW+ MI A + AL LF M + P+ +T V
Sbjct: 228 GYVSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVS 287
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC + + G L + V + + + + GR G + M +
Sbjct: 288 VLQACASLAALEHGKL-VHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMK-K 345
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
D + W SL+ H + A F+++I
Sbjct: 346 RDVISWNSLISIYGMHGLGKKAIQIFENMI 375
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 45/249 (18%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIVV 59
+ +A VF MP+ N +W+AM Y+ E + LF M A + N T+ V+
Sbjct: 230 VSYASSVFGAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVL 289
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C+ A+ G+ VH +RG + LI MY G + +VF M +R+V+
Sbjct: 290 QACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVI 349
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
W ++IS Y G G G++ A ++F+ M NR
Sbjct: 350 SWNSLISIY---GMHGLGKK----------------------------AIQIFENMINRG 378
Query: 180 V----MSWNTLLNGYANSGDVGSFEKVFEEM-------PERNVYSWNVLIGGYARNGRFS 228
V +++ T+L +++G V + +FE M P Y+ V I G R R
Sbjct: 379 VSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILG--RANRLD 436
Query: 229 DALEAFKQM 237
+A+E + M
Sbjct: 437 EAIELIQNM 445
>Medtr1g040585.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15028593-15026470 | 20130731
Length = 571
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 183/499 (36%), Positives = 267/499 (53%), Gaps = 55/499 (11%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL-DLAPE 146
F+ AL++MY+ G + DA KV+ M ++VV W AM++ Y G L + E
Sbjct: 43 FVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREE 102
Query: 147 R---DVVMWSIVISGYIESGDMVSARELFDKM---------------------------- 175
R DVV WS VISGY + G A ++F +M
Sbjct: 103 RIELDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHG 162
Query: 176 ------------------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEM--PERNVYSWN 215
N D+ N L++ YA + +F+E+ +R+V +W
Sbjct: 163 KETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWT 222
Query: 216 VLIGGYARNGRFSDALEAFKQML-VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA- 273
V+IGGYA+ G + AL+ F +M + +VPNDFT+ VL+AC+RL AL GK +H Y
Sbjct: 223 VMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVL 282
Query: 274 -ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
S +FV N LIDMY+K G +++A VF+ + +R+ ISW +++ G MHG + DA
Sbjct: 283 RRSRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDA 342
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
+FD+M+ DG+TF+ +L AC+H G+V G F M + + P +EHY CMAD
Sbjct: 343 FRVFDEMRKEALVLDGITFLVVLYACSHSGMVDRGIDLFYRMSKDFVVDPGVEHYACMAD 402
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPAN 452
L GRAG L +A + M MEP V+W +LL ACRTH NVE+AE A + L+EL+ N
Sbjct: 403 LFGRAGRLCEATRLINDMSMEPTPVVWIALLSACRTHSNVELAEFAAKKLLELKADNDGT 462
Query: 453 FVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
+ +LSNIY + RW+DVAR++ M+ TG +K PG S ++ + FY D H +++ I
Sbjct: 463 YTLLSNIYANARRWKDVARIRYLMKRTGIKKRPGWSWVQGRKGMETFYVGDRTHSQSQKI 522
Query: 513 YRALRGLTMLLRLHGYVPN 531
Y L L ++ GYVP
Sbjct: 523 YETLADLIQRIKAIGYVPQ 541
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 163/323 (50%), Gaps = 26/323 (8%)
Query: 140 LLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD---- 195
++++ P + + ++ Y + G M A +++++M +DV++WN ++ GY+ +G
Sbjct: 33 VVNILPVSGFFVGNALVDMYAKCGKMEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDA 92
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ F K+ EE E +V +W+ +I GYA+ G +A++ F+QM PN TL+++L
Sbjct: 93 LSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDVFRQM-CGCSCRPNVVTLMSLLS 151
Query: 256 ACSRLGALDMGKWVHVYAESIGYKG-------NMFVGNALIDMYAKCGVIESAVDVFN-- 306
C+ +GAL GK H Y+ KG ++ NALIDMYAKC +E A +F+
Sbjct: 152 GCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEI 211
Query: 307 CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE--QPDGVTFVGILSACTHMGLV 364
C RD+++W MI G A +G+ AL LF +M P+ T +L AC + +
Sbjct: 212 CPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNCIVPNDFTISCVLMACARLAAL 271
Query: 365 RDG-----FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
R G ++ +S +D + C+ D+ ++G +D A M + +A+ W
Sbjct: 272 RFGKQIHAYVLRRSRIDSDVLFVA----NCLIDMYSKSGDVDTAQVVFDSMS-KRNAISW 326
Query: 420 TSLLGACRTHKNVEIAELAFQHL 442
TSLL H E A F +
Sbjct: 327 TSLLTGYGMHGCSEDAFRVFDEM 349
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 166/419 (39%), Gaps = 96/419 (22%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNR---------------- 44
M A KV+++M + TWNAM GYS D + LF +M
Sbjct: 58 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 117
Query: 45 ------------------AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKW- 85
+ N TL ++ C+ GA+ G++ HC + K K
Sbjct: 118 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGE 177
Query: 86 ----NSFLC--TALIEMYSAKGSVGDAYKVFGEM--PERNVVVWTAMISAYISCGDVGSG 137
N L ALI+MY+ S+ A +F E+ +R+VV WT MI Y GD
Sbjct: 178 HNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 237
Query: 138 RRLLDLAPERD-----------VVMWSIVISGYIESGDMVSARELFDKMPNRDVM-SWNT 185
+L + D V+ + + G + A L + DV+ N
Sbjct: 238 LQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANC 297
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ Y+ SGDV + + VF+ M +RN SW L+ GY +G DA F +M E +V
Sbjct: 298 LIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEA-LVL 356
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY---AKCGVIESAV 302
+ T + VL ACS G +D G ID++ +K V++ V
Sbjct: 357 DGITFLVVLYACSHSGMVDRG----------------------IDLFYRMSKDFVVDPGV 394
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC-TH 360
+ + C M + G +A L + M +P V ++ +LSAC TH
Sbjct: 395 EHYAC-----------MADLFGRAGRLCEATRLINDMS---MEPTPVVWIALLSACRTH 439
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ VFD M + N +W ++ GY + D +F EM R A L+ T +V+ +CS
Sbjct: 311 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEM-RKEALVLDGITFLVVLYACS 369
Query: 64 KAGAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVV 119
+G V G + +K + C A +++ G + +A ++ +M E V
Sbjct: 370 HSGMVDRGIDLFYRMSKDFVVDPGVEHYACMA--DLFGRAGRLCEATRLINDMSMEPTPV 427
Query: 120 VWTAMISAYISCGDVG----SGRRLLDLAPERD 148
VW A++SA + +V + ++LL+L + D
Sbjct: 428 VWIALLSACRTHSNVELAEFAAKKLLELKADND 460
>Medtr5g040920.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:17991225-17993175 | 20130731
Length = 586
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/484 (35%), Positives = 277/484 (57%), Gaps = 19/484 (3%)
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSA---KGSVGDAYKVFG 111
LP ++ K ++E +Q+ K ++ N+ + T I ++ K S+ A+++F
Sbjct: 26 LPHLISLIPKCTTLKELKQIQAYTIKTNYQNNTNVITKFINFCTSNPTKASMEHAHQLFD 85
Query: 112 EMPERNVVVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS 167
++ + N+V++ M Y D + RR L L + + E +
Sbjct: 86 QITQPNIVLFNTMARGYARLNDPLRMITHFRRCLRLVSK---------VKALAEGKQLHC 136
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
N V+ TL+N Y GD+ + +VF+++ E V ++N +I ARN R
Sbjct: 137 FAVKLGVSDNMYVVP--TLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRA 194
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
++AL F++ L E + P D T++ VL +C+ LG+LD+G+W+H Y + G+ + V
Sbjct: 195 NEALALFRE-LQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTT 253
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LIDMYAKCG ++ AV+VF + +RD +W+ +I A HG+ A+S+ ++MK + QPD
Sbjct: 254 LIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPD 313
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+TF+GIL AC+H GLV +GF YF M + Y I+P I+HYGCM DLLGRAG LD+A F+
Sbjct: 314 EITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFI 373
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
++P++P ++W +LL AC TH NVE+ + + + EL+ + ++V+ SN+ G+W
Sbjct: 374 DELPIKPTPILWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWD 433
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
DV L+ M D G K+PGCS IE N+ V EF++ + H + +++RAL L L+ G
Sbjct: 434 DVNHLRKTMIDKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELKSAG 493
Query: 528 YVPN 531
YVP+
Sbjct: 494 YVPD 497
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 27/338 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M HA ++FD++ +PN +N M GY A +N + HF +R
Sbjct: 77 MEHAHQLFDQITQPNIVLFNTMARGY-------------ARLNDPLRM-ITHFRR--CLR 120
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SK A+ EG+Q+HC A K G N ++ LI MY+A G + + +VF ++ E VV
Sbjct: 121 LVSKVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVA 180
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+ A+I + R L ++ + V +V+S G + R + + +
Sbjct: 181 YNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVK 240
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+R V TL++ YA G + VF +MP+R+ +W+ +I YA +G A+
Sbjct: 241 KYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAIIVAYATHGDGFQAIS 300
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
+M E V P++ T + +L ACS G ++ G ++ H G ++ ++D+
Sbjct: 301 MLNEMKKE-KVQPDEITFLGILYACSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDL 359
Query: 292 YAKCGVIESAVDVFNCLDRRDI-ISWNTMINGLAMHGN 328
+ G ++ A + L + I W T+++ + HGN
Sbjct: 360 LGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGN 397
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 123/276 (44%), Gaps = 23/276 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+R+VFDK+ EP +NA+ + + + LF E+ P + T+ +V+ SC+
Sbjct: 166 SRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTD-VTMLVVLSSCA 224
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G++ G +H K GF + T LI+MY+ GS+ DA VF +MP+R+ W+A
Sbjct: 225 LLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSA 284
Query: 124 MISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDK 174
+I AY + GD +L+ + V ++++ +G +E G E F
Sbjct: 285 IIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEG-----FEYFHG 339
Query: 175 MPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV-YSWNVLIGGYARNGRFS 228
M N + + +++ +G + K +E+P + W L+ + +G
Sbjct: 340 MTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPILWRTLLSACSTHGNVE 399
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
+++ D D+ + + L C+R G D
Sbjct: 400 MGKRVIERIFELDDSHGGDYVIFSNL--CARYGKWD 433
>Medtr5g020650.1 | PPR containing plant-like protein | HC |
chr5:7912169-7910613 | 20130731
Length = 518
Score = 327 bits (838), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 175/497 (35%), Positives = 268/497 (53%), Gaps = 45/497 (9%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAK--GSVGDAYKVFGEMPE 115
++ CS G ++ Q+H K+G + + L+ Y++ ++ A VF +
Sbjct: 17 LLERCSNIGELK---QIHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISS 73
Query: 116 RNVVVWTAMISAYISCGDVGSGRRL-------------------------LDLAPERDVV 150
N V+W MI AY + D L L E +
Sbjct: 74 PNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQI 133
Query: 151 MWSIVISG--------------YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
I+ G Y SG + SA LFD +P+RD++SWNT+++GY G+V
Sbjct: 134 HVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNV 193
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
K+F+ MPE+NV SW +I G+ R G +AL +QMLV G + P+ TL L A
Sbjct: 194 EMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAG-IKPDKITLSCSLSA 252
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ LGAL+ GKW+H Y K + +G ALIDMY KCG ++ A+ VF+ L+++ + +W
Sbjct: 253 CAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLEKKCVYTW 312
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
+I G A+HG ++AL F QM+ + +P TF +L+AC+H GLV +G F+SM
Sbjct: 313 TAIIGGFAVHGKGSEALDWFTQMQKAGIKPTSFTFTAVLTACSHTGLVEEGKSLFESMST 372
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
Y++ P +EHYGCM DLLGRAG L +A FV MP++P+A IW SLL AC HK++E+ +
Sbjct: 373 FYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSLLNACHLHKHLELGK 432
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
+ LIEL+P++ ++ L++I+ G W + ++++ +++ G LPGCS I N
Sbjct: 433 EIGKFLIELDPEHDGRYIHLASIHAAAGEWDEASQVRSHIKNKGLLNLPGCSTITLNGVA 492
Query: 497 VEFYSLDERHPETESIY 513
EF++ E HP +Y
Sbjct: 493 HEFFAGAEPHPHVREMY 509
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 177/367 (48%), Gaps = 43/367 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR VFD++ PNT WN M YS + + ++L+ +M + P N +T P +++
Sbjct: 61 LTYARMVFDRISSPNTVMWNTMIRAYSNSNDPEEALLLYHQMLHHSI-PHNAYTFPFLLK 119
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS A+ E Q+H KRGF + +L+ +Y+ GS+ A+ +F +P R++V
Sbjct: 120 ACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVS 179
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
W MI YI CG+V ++ PE++V+ W+ +I G++ +G A L +M
Sbjct: 180 WNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRTGMHKEALCLLQQMLVAGI 239
Query: 176 -PNRDVMSWN---------------------------------TLLNGYANSGDVGSFEK 201
P++ +S + L++ Y G++
Sbjct: 240 KPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLGCALIDMYVKCGEMKKALL 299
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF ++ ++ VY+W +IGG+A +G+ S+AL+ F QM G + P FT AVL ACS G
Sbjct: 300 VFSKLEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAG-IKPTSFTFTAVLTACSHTG 358
Query: 262 ALDMGKWVHVYAESI-GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTM 319
++ GK + + K M ++D+ + G ++ A + + + + W ++
Sbjct: 359 LVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEAKEFVESMPIKPNAAIWGSL 418
Query: 320 INGLAMH 326
+N +H
Sbjct: 419 LNACHLH 425
>Medtr7g417770.1 | PPR containing plant-like protein | HC |
chr7:5697167-5694522 | 20130731
Length = 881
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 293/540 (54%), Gaps = 10/540 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M ARKVF+ P P + NA+ GY+ + + + +F + ++ + +L +
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYL-DFDEISLSGALT 380
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS EG Q+H +A K G +N + +++MY+ G++ +A +F +M ++ V
Sbjct: 381 ACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440
Query: 121 WTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W A+I+A+ V L L E D + V+ + E+ ++
Sbjct: 441 WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI 500
Query: 177 NRDV-MSW---NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + W + +++ Y G + EK+ E + ER SWN +I G++ + +AL
Sbjct: 501 KSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALS 560
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +ML G V+P++FT VL C+ L +++GK +H + ++++ + ++DMY
Sbjct: 561 YFSRMLQVG-VIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMY 619
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG ++ + +F +RD ++W+ MI A HG DA+ LF++M+ +P+ F+
Sbjct: 620 SKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFI 679
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L AC HMG V G YF+ M HY + PQ+EHY CM DLLGR+G +++A+ + MP
Sbjct: 680 SVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPF 739
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
E D VIW +LLG CR NVE+AE A L++L+P++ + +V+LSN+Y G W +VA++
Sbjct: 740 EADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKI 799
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
+ M++ +K PGCS I+ D V F D+ HP +E IY+ L ++ GYVP +
Sbjct: 800 RSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEI 859
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 191/424 (45%), Gaps = 42/424 (9%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
P T + + CS A+ G+Q H GF F+ L++ Y ++ A+
Sbjct: 35 PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA 168
VF +MP+R+V+ W MI Y G++ + L D PERDVV W+ ++S Y+++G +
Sbjct: 95 VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154
Query: 169 RELFDKMP---------------------------------------NRDVMSWNTLLNG 189
E+F KM + DV++ L++
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y+ + +F EMPERN W+ +I GY RN RF++ L+ +K ML EG V T
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA-T 273
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+ +C+ L A ++G +H YA + + VG A +DMYAKC + A VFN
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
S N +I G A +AL +F ++ S D ++ G L+AC+ + +G +
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG-I 392
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ + I + D+ + G L +A M ++ DAV W +++ A +
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQN 451
Query: 430 KNVE 433
++VE
Sbjct: 452 EHVE 455
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 214/458 (46%), Gaps = 22/458 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+ +FD MPE + +WN+M + Y HR + +F +M R ++ T +V++
Sbjct: 120 MEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM-RLLEIQHDYATFAVVLK 178
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G QVHC+A + GF + TAL++MYS + A+ +F EMPERN V
Sbjct: 179 ACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVC 238
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
W+A+I+ Y+ G +L + + + + + S +SA EL ++
Sbjct: 239 WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYAL 298
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D + L+ YA + KVF P S N LI GYAR + +ALE
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALE 358
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F+ L + + ++ +L L ACS + G +H A G N+ V N ++DMY
Sbjct: 359 IFRS-LQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMY 417
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG + A +F+ ++ +D +SWN +I + + + L+LF M S +PD TF
Sbjct: 418 AKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFG 477
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQ---IEHY--GCMADLLGRAGLLDQAVSFV 407
++ AC + G M H +I ++ + + D+ + G+L +A
Sbjct: 478 SVVKACAGKKALNYG------MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIH 531
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
++ E V W S++ + K E A F ++++
Sbjct: 532 ERLE-ERTTVSWNSIISGFSSEKQGENALSYFSRMLQV 568
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 108/262 (41%), Gaps = 30/262 (11%)
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
T + CS L A++ GK H G+ +FV N L+ Y KC + A +VF+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ +RD+ISWNTMI G A GN A LFD M + D V++ +LS G R
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMP----ERDVVSWNSMLSCYLQNGFHRKS 154
Query: 368 FLYFQSMVDHYSIIPQIEH-YGCMADLLGRA------GLLDQAVSFVRKMPMEPDAVIWT 420
F M + +I+H Y A +L GL Q +M + D V T
Sbjct: 155 IEIFTKMR-----LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+L+ T K + + AF E+ +N + + Y R+ + +L M D G
Sbjct: 210 ALVDMYSTCKKL---DHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEG 266
Query: 481 -----------FRKLPGCSVIE 491
FR G S E
Sbjct: 267 MGVSQATFASAFRSCAGLSAFE 288
>Medtr7g017700.1 | PPR containing plant-like protein | HC |
chr7:5672185-5669078 | 20130731
Length = 881
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 293/540 (54%), Gaps = 10/540 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M ARKVF+ P P + NA+ GY+ + + + +F + ++ + +L +
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYL-DFDEISLSGALT 380
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS EG Q+H +A K G +N + +++MY+ G++ +A +F +M ++ V
Sbjct: 381 ACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVS 440
Query: 121 WTAMISAYISCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W A+I+A+ V L L E D + V+ + E+ ++
Sbjct: 441 WNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVI 500
Query: 177 NRDV-MSW---NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + W + +++ Y G + EK+ E + ER SWN +I G++ + +AL
Sbjct: 501 KSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALS 560
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +ML G V+P++FT VL C+ L +++GK +H + ++++ + ++DMY
Sbjct: 561 YFSRMLQVG-VIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTIVDMY 619
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG ++ + +F +RD ++W+ MI A HG DA+ LF++M+ +P+ F+
Sbjct: 620 SKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNHTIFI 679
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L AC HMG V G YF+ M HY + PQ+EHY CM DLLGR+G +++A+ + MP
Sbjct: 680 SVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIESMPF 739
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
E D VIW +LLG CR NVE+AE A L++L+P++ + +V+LSN+Y G W +VA++
Sbjct: 740 EADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGEVAKI 799
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
+ M++ +K PGCS I+ D V F D+ HP +E IY+ L ++ GYVP +
Sbjct: 800 RSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGYVPEI 859
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 191/424 (45%), Gaps = 42/424 (9%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
P T + + CS A+ G+Q H GF F+ L++ Y ++ A+
Sbjct: 35 PTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFN 94
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA 168
VF +MP+R+V+ W MI Y G++ + L D PERDVV W+ ++S Y+++G +
Sbjct: 95 VFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKS 154
Query: 169 RELFDKMP---------------------------------------NRDVMSWNTLLNG 189
E+F KM + DV++ L++
Sbjct: 155 IEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDM 214
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y+ + +F EMPERN W+ +I GY RN RF++ L+ +K ML EG V T
Sbjct: 215 YSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQA-T 273
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
+ +C+ L A ++G +H YA + + VG A +DMYAKC + A VFN
Sbjct: 274 FASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFP 333
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
S N +I G A +AL +F ++ S D ++ G L+AC+ + +G +
Sbjct: 334 NPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEG-I 392
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ + I + D+ + G L +A M ++ DAV W +++ A +
Sbjct: 393 QLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIK-DAVSWNAIIAAHEQN 451
Query: 430 KNVE 433
++VE
Sbjct: 452 EHVE 455
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 127/458 (27%), Positives = 214/458 (46%), Gaps = 22/458 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+ +FD MPE + +WN+M + Y HR + +F +M R ++ T +V++
Sbjct: 120 MEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM-RLLEIQHDYATFAVVLK 178
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G QVHC+A + GF + TAL++MYS + A+ +F EMPERN V
Sbjct: 179 ACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVC 238
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
W+A+I+ Y+ G +L + + + + + S +SA EL ++
Sbjct: 239 WSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYAL 298
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D + L+ YA + KVF P S N LI GYAR + +ALE
Sbjct: 299 KTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALE 358
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F+ L + + ++ +L L ACS + G +H A G N+ V N ++DMY
Sbjct: 359 IFRS-LQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMY 417
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG + A +F+ ++ +D +SWN +I + + + L+LF M S +PD TF
Sbjct: 418 AKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFG 477
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQ---IEHY--GCMADLLGRAGLLDQAVSFV 407
++ AC + G M H +I ++ + + D+ + G+L +A
Sbjct: 478 SVVKACAGKKALNYG------MEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIH 531
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
++ E V W S++ + K E A F ++++
Sbjct: 532 ERLE-ERTTVSWNSIISGFSSEKQGENALSYFSRMLQV 568
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 108/262 (41%), Gaps = 30/262 (11%)
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
T + CS L A++ GK H G+ +FV N L+ Y KC + A +VF+
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ +RD+ISWNTMI G A GN A LFD M + D V++ +LS G R
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMP----ERDVVSWNSMLSCYLQNGFHRKS 154
Query: 368 FLYFQSMVDHYSIIPQIEH-YGCMADLLGRA------GLLDQAVSFVRKMPMEPDAVIWT 420
F M + +I+H Y A +L GL Q +M + D V T
Sbjct: 155 IEIFTKMR-----LLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGT 209
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+L+ T K + + AF E+ +N + + Y R+ + +L M D G
Sbjct: 210 ALVDMYSTCKKL---DHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEG 266
Query: 481 -----------FRKLPGCSVIE 491
FR G S E
Sbjct: 267 MGVSQATFASAFRSCAGLSAFE 288
>Medtr1g085700.1 | pentatricopeptide (PPR) repeat protein, putative
| HC | chr1:38304139-38306748 | 20130731
Length = 739
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 184/536 (34%), Positives = 296/536 (55%), Gaps = 12/536 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+M + ATW A+ G + V+LF +M R + + V+ C
Sbjct: 190 ARKVFDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKM-RLEGLKADSVIVASVLPVCG 248
Query: 64 K-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ ++ G +H A + GF + ++ A+I+MY G +A VF M R++V W+
Sbjct: 249 RLMEGLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWS 308
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
+I+ Y G R++++ + ++ S V+ + +E+ + + +
Sbjct: 309 TLIAGYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQ 368
Query: 179 ----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
DV+ + L++ YAN G + E +F M + ++ WN LI GY G F A F
Sbjct: 369 GLLTDVVVGSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTF 428
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+++ V + PN TLV+VL C+++GAL GK +H YA G N+ VGN+LIDMY+K
Sbjct: 429 REIWV-AEHRPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSK 487
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E V VFN + ++ I++NTMI+ HG L ++QM + +P+ VTF+ +
Sbjct: 488 CGFLELGVKVFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISL 547
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H GLV G+L + SMV+ Y I P +EHY CM DL+GR G LD A F+ MP+ P
Sbjct: 548 LSACSHAGLVDRGWLLYNSMVNDYGIKPDMEHYSCMVDLIGRTGDLDGAYKFITTMPVTP 607
Query: 415 DAVIWTSLLGACRTHKNVEIA-ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
DA + SLLGACR H VE+A +L +H+ +L ++ ++V+LSN+Y RW+D+++++
Sbjct: 608 DANVLGSLLGACRLHNKVELADQLTAEHIFQLNTEDSGHYVLLSNLYASGKRWEDMSKVR 667
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++D G K PG S I+ S+ F++ +PE I L L ++++ Y+
Sbjct: 668 SLIKDKGLEKKPGSSWIQVGHSIFVFHATSIFYPELAKIEETLDSLFLVMKNEDYI 723
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 215/475 (45%), Gaps = 62/475 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A F ++P + WNA+ + + + + M R AP N +T P+V+++C
Sbjct: 88 YAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFAPDN-YTYPLVLKAC 146
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S A+ G V+ K N F+ ALI+M+ S+ DA KVF EM R++ WT
Sbjct: 147 SSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKVFDEMNVRDLATWT 206
Query: 123 AMISAYISCGDVGSGR-----------RLLDLAPERDVVMWSIVISGYIESGDMV----- 166
A+I CG+V +G RL L + +V + + G + G +
Sbjct: 207 ALI-----CGNVWNGEWDEAVLLFRKMRLEGLKADSVIVASVLPVCGRLMEGLKLGMAMH 261
Query: 167 --SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ R FD D+ N +++ Y G VF M R++ SW+ LI GY++N
Sbjct: 262 GCALRSGFDS----DLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIAGYSQN 317
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G + ++ E + +M+ G + N+ + VL A +L GK +H + G ++ V
Sbjct: 318 GMYKESFELYVRMVNMG-LTTNEIVVSTVLPALGKLKLFKQGKEMHNFVLKQGLLTDVVV 376
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
G+AL+DMYA CG I+ A +F + DI+ WN++I G + G+ A F ++ +
Sbjct: 377 GSALVDMYANCGSIKEAESIFRNMLDMDIMVWNSLIAGYNLVGDFQSAFFTFREIWVAEH 436
Query: 345 QPDGVTFVGILSACTHMGLVRDG---------------FLYFQSMVDHYS---------- 379
+P+ +T V +L CT +G +R G S++D YS
Sbjct: 437 RPNHITLVSVLPICTQIGALRQGKEIHCYATRSGLGLNISVGNSLIDMYSKCGFLELGVK 496
Query: 380 -----IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC 426
++ Y M G GL ++ + F +M M+P+ V + SLL AC
Sbjct: 497 VFNQMMVKNTITYNTMISACGAHGLGEKGLKFYEQMNEAGMKPNKVTFISLLSAC 551
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 158/361 (43%), Gaps = 43/361 (11%)
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------ 175
+ +++AY++ G P + + W+ ++ I S + + + + M
Sbjct: 74 SHLVNAYVNFGSHHYAFLFFSQLPHKSNLAWNAILRALIGSNNFTLSIQFYHSMLRHGFA 133
Query: 176 PNR----------------DVMSW---NTLLNG--------------YANSGDVGSFEKV 202
P+ ++ W N L+N + + KV
Sbjct: 134 PDNYTYPLVLKACSSLQAIEIGRWVYHNILINEEKANLFVQCALIDMFVKCESLEDARKV 193
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL-G 261
F+EM R++ +W LI G NG + +A+ F++M +EG + + + +VL C RL
Sbjct: 194 FDEMNVRDLATWTALICGNVWNGEWDEAVLLFRKMRLEG-LKADSVIVASVLPVCGRLME 252
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
L +G +H A G+ +++V NA+IDMY KCG + A VF+ + RDI+SW+T+I
Sbjct: 253 GLKLGMAMHGCALRSGFDSDLYVSNAIIDMYCKCGYPDEACLVFSYMVFRDIVSWSTLIA 312
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
G + +G ++ L+ +M N + + +L A + L + G + V ++
Sbjct: 313 GYSQNGMYKESFELYVRMVNMGLTTNEIVVSTVLPALGKLKLFKQG-KEMHNFVLKQGLL 371
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
+ + D+ G + +A S R M ++ D ++W SL+ + + A F+
Sbjct: 372 TDVVVGSALVDMYANCGSIKEAESIFRNM-LDMDIMVWNSLIAGYNLVGDFQSAFFTFRE 430
Query: 442 L 442
+
Sbjct: 431 I 431
>Medtr2g007570.1 | PPR containing plant-like protein | HC |
chr2:1033154-1029007 | 20130731
Length = 558
Score = 325 bits (833), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 177/496 (35%), Positives = 273/496 (55%), Gaps = 13/496 (2%)
Query: 3 HARKVFDKMPE-PNTATWNAMFNGYSLTESHR-DVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+A K+FD MP N W ++ + +H + FA M++ P + FT +V+
Sbjct: 65 YAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILP-SGFTFSLVLN 123
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + A EG+QVH + GF N + TAL++MY+ G V DA VF + +R+VV
Sbjct: 124 ACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVDRDVVA 183
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
WTAMI Y G + R L D ER+ W+ +++GY GDM +A EL+D M +D
Sbjct: 184 WTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKDE 243
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWN-----VLIGGYARNGRFSDALEAFK 235
++W ++ GY G+V ++F+E+ WN L+ YA+NG +A+E ++
Sbjct: 244 VTWVAMIAGYGKLGNVSEARRIFDEI----TVPWNPSTCAALLACYAQNGHAREAIEMYE 299
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M + D +V + AC++L + M + E + V NALI M +KC
Sbjct: 300 KMR-RAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKC 358
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I+ A FN + RD+ +++ MI A HG + DA+ LF +M+ +P+ VTFVG+L
Sbjct: 359 GNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVL 418
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+AC+ GL+ +G +FQ M + Y I P EHY CM DLLGRAG L++A S +++ D
Sbjct: 419 NACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSAD 478
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
A W SLL ACR + NVE+ E+A +HL E++P + N+V+L+N Y +W+ +K
Sbjct: 479 ATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTYASNDKWECAEEVKKL 538
Query: 476 MRDTGFRKLPGCSVIE 491
M G +K G S I+
Sbjct: 539 MSKKGMKKPSGYSWIQ 554
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 144/335 (42%), Gaps = 44/335 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR +FD M E N+ TW M GY+ + + L+ MN + T ++
Sbjct: 197 MVDARFLFDNMGERNSFTWTTMVAGYANYGDMKAAMELYDVMNGK-----DEVTWVAMIA 251
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV-V 119
K G V E ++ + WN C AL+ Y+ G +A +++ +M + V
Sbjct: 252 GYGKLGNVSEARRIF---DEITVPWNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKV 308
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVI----SGYIESGDMVSARELFDKM 175
AM+ A +C + RD+ M + + G+ E +VS
Sbjct: 309 TDVAMVGAISACAQL------------RDIRMSNSLTYNIEEGFCEKTHIVS-------- 348
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
N L++ + G++ + F M R++Y+++ +I +A +G+ DA++ F
Sbjct: 349 --------NALIHMQSKCGNIDLAWREFNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFL 400
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M EG + PN T V VL ACS G ++ G ++ + E G + ++D+ +
Sbjct: 401 KMQQEG-LKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGR 459
Query: 295 CGVIESAVDVFN-CLDRRDIISWNTMINGLAMHGN 328
G +E A + D +W +++ ++GN
Sbjct: 460 AGQLEKAYSLIKENSTSADATTWGSLLAACRVYGN 494
>Medtr3g434800.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:11323375-11320804 | 20130731
Length = 724
Score = 325 bits (832), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 190/547 (34%), Positives = 299/547 (54%), Gaps = 26/547 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLP-IVVRSC 62
A ++FD++PEP+ ++N + ++ V +F E+ R L+ FTL ++ S
Sbjct: 95 AHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFKEV-REVGLVLDGFTLSGVISASV 153
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVV 120
G VR Q+HC A G+ + +C A++ Y G + +A++VF EM E R++V
Sbjct: 154 EDVGLVR---QLHCFALLCGYDCYASVCNAVLACYGRLGRLNEAWRVFREMGEGCRDMVS 210
Query: 121 WTAMISAYISCGDVGSGRRLLDL-------APERDVVMWSIVISGYIESGDMVSARELFD 173
W AMI ++CG G + L L E D+ + V++ + D+ +
Sbjct: 211 WNAMI---VACGQHREGAKALRLFGEMERMGLEVDMFTMASVLTAFTCLKDLAGGMQFHG 267
Query: 174 KMP----NRDVMSWNTLLNGYANSGDVGSFE--KVFEEMPERNVYSWNVLIGGYARNGRF 227
KM +R+ + L++ Y+ G E KVFEE+P+ ++ WN +I G++++
Sbjct: 268 KMIKSGFHRNSHVGSGLIDLYSKCAPHGMLECMKVFEEIPKPDLVLWNTMISGFSQHEDL 327
Query: 228 -SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN-MFVG 285
DAL +F++M G P+D + V V+ ACS L + +GK VH A N + V
Sbjct: 328 CEDALSSFREMQRVG-FCPDDCSFVCVISACSNLSSPSVGKQVHALAIKSDIPCNRVSVN 386
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
NA + MY+KCG + A +F+ + ++ +S N+MI G A HG ++L LF+ M +
Sbjct: 387 NAFVAMYSKCGNLHDARRIFDTMPEQNTVSLNSMIAGYAQHGAEIESLQLFELMLQEKIV 446
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P+ +TF+ +LSAC H G V +G YF M + + I P+ EHY CM DLLGRAG L++A
Sbjct: 447 PNNITFISVLSACAHTGKVDEGEKYFNMMKEKFGIEPEAEHYSCMIDLLGRAGKLNKAER 506
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
+ MP +P ++ W +LLGAC+ H NVE+A A ++LEP N A +VMLSN+Y R
Sbjct: 507 IIETMPFDPGSIEWAALLGACKKHGNVELAVKAANKFLQLEPYNAAPYVMLSNVYASANR 566
Query: 466 WQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRL 525
W++ A +K MR+ G +K PGCS IE + V F + D HP + I+ + L M L+
Sbjct: 567 WEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPRIKEIHTYMSELLMKLKQ 626
Query: 526 HGYVPNL 532
GYV ++
Sbjct: 627 AGYVADI 633
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 179/447 (40%), Gaps = 47/447 (10%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T +++ C G+ +H K +++L +YS G+ +A F
Sbjct: 12 TFRTLLKQCITQKDFLTGKTLHAFYIKSFIPHSTYLSNHFTLLYSKFGTFSNALTAFHFT 71
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF- 172
NV + +I A +L D PE DVV ++ +I+ + G+ A +F
Sbjct: 72 GYPNVFSYNTIIHACAKHNLPNLAHQLFDEIPEPDVVSYNTLIAVHARRGECGQAVSVFK 131
Query: 173 ---------DKMPNRDVMS---------------------------WNTLLNGYANSGDV 196
D V+S N +L Y G +
Sbjct: 132 EVREVGLVLDGFTLSGVISASVEDVGLVRQLHCFALLCGYDCYASVCNAVLACYGRLGRL 191
Query: 197 GSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVL 254
+VF EM E R++ SWN +I ++ + AL F +M G V + FT+ +VL
Sbjct: 192 NEAWRVFREMGEGCRDMVSWNAMIVACGQHREGAKALRLFGEMERMGLEV-DMFTMASVL 250
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC---GVIESAVDVFNCLDRR 311
A + L L G H G+ N VG+ LID+Y+KC G++E + VF + +
Sbjct: 251 TAFTCLKDLAGGMQFHGKMIKSGFHRNSHVGSGLIDLYSKCAPHGMLE-CMKVFEEIPKP 309
Query: 312 DIISWNTMINGLAMHGNTA-DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLY 370
D++ WNTMI+G + H + DALS F +M+ PD +FV ++SAC+++ G
Sbjct: 310 DLVLWNTMISGFSQHEDLCEDALSSFREMQRVGFCPDDCSFVCVISACSNLSSPSVGKQV 369
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK 430
+ ++ + + G L A MP E + V S++ H
Sbjct: 370 HALAIKSDIPCNRVSVNNAFVAMYSKCGNLHDARRIFDTMP-EQNTVSLNSMIAGYAQH- 427
Query: 431 NVEIAELAFQHLIELEPKNPANFVMLS 457
EI L L+ E P N +S
Sbjct: 428 GAEIESLQLFELMLQEKIVPNNITFIS 454
>Medtr6g059820.1 | PPR containing plant-like protein | HC |
chr6:20520961-20518530 | 20130731
Length = 528
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 176/458 (38%), Positives = 265/458 (57%), Gaps = 33/458 (7%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV----VVWTAMISAYISCGDVGSGRRLL 141
N +L TA+I +S++ +K+F M N+ ++ ++ + R L+
Sbjct: 69 NIYLFTAIITAFSSQQHT--TFKLFKTMLNSNIRPNNFIYPHVLKSV-------KERFLV 119
Query: 142 DLAPERDV----VMWSIVISGYIES-----GDMVSARELFDKMPNRDVMSWNTLLNGYAN 192
DL + V + + +V + ++S G + A ++FD+M R+++ + L++GY
Sbjct: 120 DLVHAQIVKCGFLNYPVVETSLVDSYSKVLGGLRDAHKVFDEMSERNIVVFTVLVSGYLR 179
Query: 193 SGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM-----LVEGDVV--- 244
GDV VF+EM +R+V +WN +I G +NG FS+ + F++M L EG
Sbjct: 180 VGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGN 239
Query: 245 -PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN T+V VL AC G L +GKW+H Y G+ + FV NAL+DMY KCG +E A
Sbjct: 240 KPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARK 299
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE--QPDGVTFVGILSACTHM 361
VF R+ + SWN+MIN A+HG DA++ F++M +PD VTF+G+L+ACTH
Sbjct: 300 VFEMDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHG 359
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
GLV G YF+ M+ Y I PQI HYGC+ DLLGRAG D+A+ V+ M MEPD V+W S
Sbjct: 360 GLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGS 419
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
LL C+ H ++AE A + L+E++P N ML+NIY LG+W ++ + ++
Sbjct: 420 LLNGCKVHGRTDLAEFAAKKLVEIDPHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKS 479
Query: 482 RKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
K+PGCS IE +D V +F+SLD+ +P+TE +Y L L
Sbjct: 480 YKIPGCSWIEVDDKVHQFFSLDQSNPKTEELYNILESL 517
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 139/325 (42%), Gaps = 56/325 (17%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAA---------PLNHFTLPI 57
VFD+M + + WNA+ +G + + + LF EM AA N T+
Sbjct: 189 VFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVC 248
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
V+ +C G ++ G+ +H + GF +SF+ AL++MY GS+ A KVF EM +R
Sbjct: 249 VLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSNALVDMYGKCGSLELARKVF-EMDQRK 307
Query: 118 -VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
+ W +MI+ Y G D + + +E G V E+
Sbjct: 308 GLTSWNSMINCYALHGKC------------EDAITF---FEKMVECGGGVRPDEV----- 347
Query: 177 NRDVMSWNTLLNGYANSGDV----GSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDAL 231
++ LLN + G V G FE + +E E + + LI R G+F +A+
Sbjct: 348 -----TFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGCLIDLLGRAGQFDEAM 402
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-----KWVHVYAESIGYKGNMFVGN 286
+ K M +E P++ ++L C G D+ K V + + GY G
Sbjct: 403 DVVKGMSME----PDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHNGGY------GT 452
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR 311
L ++Y + G + +V++ L ++
Sbjct: 453 MLANIYGQLGKWDEMRNVWSKLKQQ 477
>Medtr2g087120.1 | PPR containing plant-like protein | HC |
chr2:36618951-36617398 | 20130731
Length = 517
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/385 (40%), Positives = 249/385 (64%), Gaps = 1/385 (0%)
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
DV++ + +I Y + G + AR +FD+M R+++SWNT+++GY +GDV K+F+++P
Sbjct: 125 DVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLP 184
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
+NV SW V+IGG+ + + +ALE F++M + G VVP+ T++A++ AC+ LGAL +G
Sbjct: 185 VKNVVSWTVVIGGFVKKECYEEALECFREMQLAG-VVPDFVTVIAIISACANLGALGLGL 243
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
WVH ++ N+ V N+LIDMYA+CG IE A VF+ + +R+++SWN++I G A++G
Sbjct: 244 WVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNSIIVGFAVNG 303
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
ALS F MK +P+GV++ L+AC+H GL+ +G F + + P+IEHY
Sbjct: 304 LADKALSFFRSMKKEGLEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHY 363
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
GC+ DL RAG L +A ++KMPM P+ V+ SLL ACRT +VE+AE ++ +EL P
Sbjct: 364 GCLVDLYSRAGRLKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYP 423
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
+N+V+ SNIY +G+W ++++ M++ G +K S IE + + +F S D+ H
Sbjct: 424 GGDSNYVLFSNIYAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHE 483
Query: 508 ETESIYRALRGLTMLLRLHGYVPNL 532
E + IY AL L+ L L+GYVP+
Sbjct: 484 ENDYIYSALELLSFELHLYGYVPDF 508
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 157/346 (45%), Gaps = 61/346 (17%)
Query: 13 EPN---TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA---G 66
+PN T +W + + + + F +M A P NH TL ++ +C+ +
Sbjct: 46 KPNSNQTVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEP-NHITLITLLSACAHSPSKT 104
Query: 67 AVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
++ G +H A K GF N + TALI+MY+ G + A VF +M RN+V W MI
Sbjct: 105 SITFGAALHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMI 164
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PN-- 177
Y+ GDV +L D P ++VV W++VI G+++ A E F +M P+
Sbjct: 165 DGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFV 224
Query: 178 ------------------------------RD-VMSWNTLLNGYANSGDVGSFEKVFEEM 206
RD V N+L++ YA G + +VF+ M
Sbjct: 225 TVIAIISACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGM 284
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+RN+ SWN +I G+A NG AL F+ M EG + PN + + L ACS G +D G
Sbjct: 285 SQRNLVSWNSIIVGFAVNGLADKALSFFRSMKKEG-LEPNGVSYTSALTACSHAGLIDEG 343
Query: 267 -------KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
K H + I + G L+D+Y++ G ++ A DV
Sbjct: 344 LKIFADIKRDHRNSPRIEHYG------CLVDLYSRAGRLKEAWDVI 383
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 127/274 (46%), Gaps = 37/274 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FDK+P N +W + G+ E + + + F EM A P + T+ ++ +C+
Sbjct: 176 ALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVP-DFVTVIAIISACA 234
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ G VH + K+ F+ N + +LI+MY+ G + A +VF M +RN+V W +
Sbjct: 235 NLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQVFDGMSQRNLVSWNS 294
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
+I + G LA + S+ G +G +S+
Sbjct: 295 IIVGFAVNG----------LADKALSFFRSMKKEGLEPNG-----------------VSY 327
Query: 184 NTLLNGYANSGDVGSFEKVFEEMP--ERN---VYSWNVLIGGYARNGRFSDALEAFKQML 238
+ L +++G + K+F ++ RN + + L+ Y+R GR +A + K+M
Sbjct: 328 TSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEAWDVIKKM- 386
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
++PN+ L ++L AC G +++ + V Y
Sbjct: 387 ---PMMPNEVVLGSLLAACRTQGDVELAEKVMKY 417
>Medtr1g037590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:13924435-13921068 | 20130731
Length = 598
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 297/541 (54%), Gaps = 16/541 (2%)
Query: 1 MGHARKVFDKM-PEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIV 58
+ ARK+FD++ E + W AM +GY + LF EM P+ N + +
Sbjct: 48 INEARKLFDRLDAEKSVIVWTAMVSGYIKINRIEEAERLFNEM------PVRNVVSWNTM 101
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+ ++ G +E + +R WN+ + TAL G + DA ++F EM ER+
Sbjct: 102 IDGYARNGRTQEAMDLFGRMPERNVVSWNTVM-TALAHC----GRIDDAERLFNEMRERD 156
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
VV WT M++ G V R + D P R+VV W+ +I+GY ++G A +LF++MP
Sbjct: 157 VVSWTTMVAGLSKNGRVDDARDVFDRMPIRNVVSWNAMIAGYAQNGRFDEALKLFERMPE 216
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
RD+ SWNT++ G+ +GD+ EK+F MP++NV +W ++ GY ++G +AL+ F +M
Sbjct: 217 RDMPSWNTMVTGFIQNGDLNRAEKLFHAMPKKNVITWTAMMTGYVQHGLSEEALKLFNKM 276
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ P T V VL ACS L L G+ +H ++ + +V +ALI+MY+KCG
Sbjct: 277 QANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGD 336
Query: 298 IESAVDVFN--CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
A +F+ D+I+WN MI A HG +A+ LF++M+ Q + VT+VG+L
Sbjct: 337 FHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGNEAIILFNKMQELGFQANDVTYVGLL 396
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+AC+H GL +GF YF ++ + + + +HY C+ DL GRAG LD+A++ + + E
Sbjct: 397 TACSHAGLFDEGFKYFDELLKNRYMQVREDHYTCLIDLCGRAGRLDEALNIIEGLGKEVS 456
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W +LL C H N +I L ++++EP+N +++ SN+Y +G ++ A +++
Sbjct: 457 LSVWGALLAGCSVHGNADIGRLVADKVLKMEPENADTYLLASNMYASVGMREEAANVRMK 516
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
M+D G +K PGCS I+ ++V F D+ H + E + +L ++ + Y + D
Sbjct: 517 MKDKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQFEMLKISLWKAKVVAKWPDYKQKIEDA 576
Query: 536 A 536
+
Sbjct: 577 S 577
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 164/311 (52%), Gaps = 18/311 (5%)
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD-LAPERD 148
C I +G + +A KVF EM ER+ +WT MIS YI CG + R+L D L E+
Sbjct: 4 CNYFISKLCREGQINEARKVFDEMSERDSCLWTTMISGYIKCGLINEARKLFDRLDAEKS 63
Query: 149 VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
V++W+ ++SGYI+ + A LF++MP R+V+SWNT+++GYA +G +F MPE
Sbjct: 64 VIVWTAMVSGYIKINRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEAMDLFGRMPE 123
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
RNV SWN ++ A GR DA F +M E DVV T+VA L S+ G +D +
Sbjct: 124 RNVVSWNTVMTALAHCGRIDDAERLFNEMR-ERDVVSWT-TMVAGL---SKNGRVDDARD 178
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
V + + + N+ NA+I YA+ G + A+ +F + RD+ SWNTM+ G +G+
Sbjct: 179 VF---DRMPIR-NVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGD 234
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY- 387
A LF M + + +T+ +++ GL + F M + + P +
Sbjct: 235 LNRAEKLFHAMP----KKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFV 290
Query: 388 ---GCMADLLG 395
G +DL G
Sbjct: 291 TVLGACSDLAG 301
>Medtr4g094502.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38095334-38099255 | 20130731
Length = 653
Score = 324 bits (830), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/481 (38%), Positives = 275/481 (57%), Gaps = 12/481 (2%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+++ C AVREG++VH G++ +FL L+ MY + +A VF +MPERN
Sbjct: 90 LIKCCLAHKAVREGKRVHNHIFSNGYRPKTFLINTLLNMYVKLNLLEEAQMVFDKMPERN 149
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVM-----WSIVISGYIESGDMVSARE-L 171
VV WT MISAY +LL RD VM +S V+ D+ +
Sbjct: 150 VVSWTTMISAYSYAKLNDRAMKLLVFMI-RDGVMPNMYTFSSVLRACERLCDLKQVHSGI 208
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
DV + L++ Y+ G++ VF EM + WN +I +A++ +AL
Sbjct: 209 LKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVVWNSIIAAFAQHSDGDEAL 268
Query: 232 EAFKQMLVEGDVVPND-FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+K M EG P D TL +VL AC+ L++G+ VHV+ + + ++ + NAL+D
Sbjct: 269 ALYKSMRREG--FPADQSTLTSVLRACTGSSLLELGRQVHVHV--LKFDQDLILNNALLD 324
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY KCG +E A +F+ + +D+ISW+TMI+GLA +G + +AL+LFD MK S +P+ +T
Sbjct: 325 MYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEALNLFDSMKVSGPRPNYIT 384
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+G+L AC+H GLV +G+ YF+SM + Y I P EHY C+ DLLGRAG LD+ V + +M
Sbjct: 385 ILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLLDLLGRAGKLDEMVKLIHEM 444
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
EPD V W +LL ACR +NV++A A + +++L+ ++ +V+LSNIY + RW DVA
Sbjct: 445 TCEPDVVTWRTLLDACRAQRNVDLATYAAKEILKLDQQDAGAYVLLSNIYANSKRWDDVA 504
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
++ M G RK PGCS IE N+ + F D+ HP+ + I R L L GYVP
Sbjct: 505 EVRRTMSARGIRKEPGCSWIEVNNQIHAFIVGDKSHPQIDEINRKLDEYIRKLTDAGYVP 564
Query: 531 N 531
+
Sbjct: 565 D 565
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 161/340 (47%), Gaps = 21/340 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+ VFDKMPE N +W M + YS + + + L M R P N +T V+R
Sbjct: 135 LEEAQMVFDKMPERNVVSWTTMISAYSYAKLNDRAMKLLVFMIRDGVMP-NMYTFSSVLR 193
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + ++ QVH K G + + F+ +ALI+ YS G + +A VF EM + VV
Sbjct: 194 ACERLCDLK---QVHSGILKAGLESDVFVRSALIDAYSKLGELLEAVGVFREMVTGDSVV 250
Query: 121 WTAMISAYISCGD-------VGSGRRLLDLAPERDV--VMWSIVISGYIESGDMVSAREL 171
W ++I+A+ D S RR A + + V+ + S +E G V L
Sbjct: 251 WNSIIAAFAQHSDGDEALALYKSMRREGFPADQSTLTSVLRACTGSSLLELGRQVHVHVL 310
Query: 172 -FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
FD+ D++ N LL+ Y G + + +F M ++V SW+ +I G A+NG +A
Sbjct: 311 KFDQ----DLILNNALLDMYCKCGSLEDAKFIFSRMAVKDVISWSTMISGLAQNGFSVEA 366
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALI 289
L F M V G PN T++ VL ACS G ++ G + G + L+
Sbjct: 367 LNLFDSMKVSGP-RPNYITILGVLFACSHAGLVNEGWGYFRSMKNLYGIDPGREHYSCLL 425
Query: 290 DMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
D+ + G ++ V + + + D+++W T+++ N
Sbjct: 426 DLLGRAGKLDEMVKLIHEMTCEPDVVTWRTLLDACRAQRN 465
>Medtr8g027810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:10160876-10157214 | 20130731
Length = 967
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 173/533 (32%), Positives = 288/533 (54%), Gaps = 41/533 (7%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+P+ TWN++ +GY L S V+ F ++ P + ++ +++ + G + G+
Sbjct: 356 KPDIITWNSILSGYLLRGSFEMVLTSFRSLHSLGFKP-DSCSVTSALQAVIELGFFKLGK 414
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
++H + ++ ++CT+L++MY + A V
Sbjct: 415 EIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEKAQAV----------------------- 451
Query: 133 DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWNTLLN 188
L A ++V W+ +ISGY G A +L ++M D+++WN L++
Sbjct: 452 --------LHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVS 503
Query: 189 GYANSGDVGSFEKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
GY+ G + + + NV SW LI G ++N ++ DAL+ F QM E +V
Sbjct: 504 GYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAE-NVK 562
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN T+ ++L AC+ L G+ +H ++ +G+ +++V ALIDMY++ G ++ A +V
Sbjct: 563 PNSTTICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNV 622
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
FN + + + WN M+ G A+H + + + L+D+M+ +PD +TF +LSAC + GLV
Sbjct: 623 FNKIQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLV 682
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+G+ YF SM + Y+I+P IEHY CM DLLG++G LD+A F+ MP++PDA IW +LL
Sbjct: 683 DEGWKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLA 742
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
+C+ HKN+++AE+A + L ++EP N AN+V++ N+Y L RW V RLK +M +
Sbjct: 743 SCKIHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIP 802
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
P S + N S+ F + HPE IY L L +R GY P+L V Q
Sbjct: 803 PVWSWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKLGYAPDLNCVCQ 855
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 202/511 (39%), Gaps = 128/511 (25%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF + P WN + +E ++ + LF +M R +A T+ ++ ++C
Sbjct: 208 ANQVFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKML-QACG 266
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVVW 121
K A+ EG+Q+H A + G N+ +C ++I MYS A VF M + RN+ W
Sbjct: 267 KLKALNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSW 326
Query: 122 TAMISAYISCG-------DVGSGRRLLDLAPERDVVMWSIVISGYIESGD----MVSARE 170
++I +Y G + +G + P D++ W+ ++SGY+ G + S R
Sbjct: 327 NSVIFSYAVDGCLNDALDTIRNGMECSGIKP--DIITWNSILSGYLLRGSFEMVLTSFRS 384
Query: 171 L-----------------------FDKMP------------NRDVMSWNTLLNGYANSGD 195
L F K+ N DV +L++ Y +
Sbjct: 385 LHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDC 444
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ + V +NV +WN LI GY+ G+F +A++ QM+ EG + P
Sbjct: 445 LEKAQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEG-ITP---------- 493
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR---- 311
D+ W N L+ Y+ G I+ A+ + N +
Sbjct: 494 --------DLVTW-----------------NGLVSGYSMQGRIDEALTIINRIKSSGITP 528
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG-FLY 370
+++SW +I+G + + DAL +F QM+ +P+ T +L AC L++ G L+
Sbjct: 529 NVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTTICSLLCACAGPSLLKKGEELH 588
Query: 371 FQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP------------------- 411
SM + I + D+ AG L A + K+
Sbjct: 589 CFSM--KLGFVDDIYVATALIDMYSEAGKLKVAYNVFNKIQEKTLPCWNCMMMGYAIHSH 646
Query: 412 ---------------MEPDAVIWTSLLGACR 427
+ PDA+ +T+LL AC+
Sbjct: 647 GEEVMILYDKMRERHIRPDAITFTALLSACK 677
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 127/278 (45%), Gaps = 13/278 (4%)
Query: 92 ALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD-----VGSGRRLLDLAPE 146
++ Y G A K+F RN ++W + + + S G + + E
Sbjct: 92 TMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKGVE 151
Query: 147 RDVVMWSIVISGYIESGDMVSARE----LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
D ++ V+ + + + E L K + DV L+N Y + +V
Sbjct: 152 FDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQV 211
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F E P + + WN ++ R+ R+ +ALE F M + T V +L AC +L A
Sbjct: 212 FHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVG-TTVKMLQACGKLKA 270
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMI 320
L+ GK +H YA G N V N++I MY++ + A VF+ ++ R++ SWN++I
Sbjct: 271 LNEGKQLHGYALRFGLVSNTLVCNSIISMYSRNSRFKLARAVFDSMEDHSRNLSSWNSVI 330
Query: 321 NGLAMHGNTADAL-SLFDQMKNSREQPDGVTFVGILSA 357
A+ G DAL ++ + M+ S +PD +T+ ILS
Sbjct: 331 FSYAVDGCLNDALDTIRNGMECSGIKPDIITWNSILSG 368
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 77/184 (41%), Gaps = 2/184 (1%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY-ARNGRFSDALEAFKQMLVEGDV 243
T++ Y GD S K+F RN WN + + + G + L F +M +G V
Sbjct: 92 TMMRNYLEFGDFLSAIKIFFVGFARNYLLWNSFLEEFESFGGDPFEILVVFNEMYSKG-V 150
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+ VL C L G VH G+ ++ + ALI+ Y KC I+ A
Sbjct: 151 EFDSKAFTFVLKICLALREFLFGLEVHACLIKKGFHVDVHLSCALINFYGKCWSIDKANQ 210
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF+ ++ WNT++ +AL LF M+ + T V +L AC +
Sbjct: 211 VFHETPYKEDFLWNTIVMANLRSERWKNALELFCDMQRDSAKATVGTTVKMLQACGKLKA 270
Query: 364 VRDG 367
+ +G
Sbjct: 271 LNEG 274
>Medtr6g018720.1 | PPR containing plant-like protein | HC |
chr6:7213956-7209580 | 20130731
Length = 535
Score = 323 bits (827), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 287/534 (53%), Gaps = 41/534 (7%)
Query: 1 MGHARKVFDKMPEPNTATW-NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M +K+ N + W +++ N + S + +VL+ + + +P ++
Sbjct: 1 MQQVKKIGGITKSFNPSNWSHSIRNNSTNQASLKRALVLYKQTRHDTTH--DPTVIPQLL 58
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C + + +H + K G + F+ TA++ Y+ G V DA KVF M ERN V
Sbjct: 59 KACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMHERNDV 118
Query: 120 VWTAMISAYISCGDVGSG-------------------------------RRLLDLAPE-- 146
W AMI Y+ GD S R+ D P
Sbjct: 119 TWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYEL 178
Query: 147 RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
+DVV+W++++ GY + G+M ARE+F+ MP R+ W++++ GY GDV E +F +
Sbjct: 179 KDVVIWTMMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
P RN+ WN +I GY +NG ALEAF +M V+G P++FT+V+VL AC++LG LD G
Sbjct: 239 PVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDG-FEPDEFTVVSVLSACAQLGDLDAG 297
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K +H E G N FV + LIDMYAKCG + +A VF + R++ WN MI G A++
Sbjct: 298 KQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G + L D+M+ S +PD VTF+ +LSAC H GLV + M + Y I I H
Sbjct: 358 GQCNEVLEYLDRMEESNIRPDAVTFITVLSACAHGGLVSEALEVISKM-EEYGIEMGIRH 416
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
YGCM DLLGRAG L +A +++MPM+P+ + +++GAC H ++++AE + +I ++
Sbjct: 417 YGCMVDLLGRAGRLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMK-MIGVD 475
Query: 447 PKNPANF--VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
N V+LSNIY +W+ ++ +M D G K+PGCS I ++S V+
Sbjct: 476 SAACVNSHNVLLSNIYAASEKWEKSEMIRSSMVDGGSEKIPGCSSIILSNSAVD 529
>Medtr4g095065.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:39629093-39627012 | 20130731
Length = 626
Score = 322 bits (826), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 283/517 (54%), Gaps = 40/517 (7%)
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
FT+ + K+ + Q+H +R ++ L L YS+ G + + +F
Sbjct: 22 FTVETLAVLIDKSKSKTHLLQIHASLVRRNLDDHTILNFKLQRRYSSLGHLNYSVTLFNR 81
Query: 113 MPERNVVVWTAMISAYISCG-------------------DVGSGRRLLD---LAPER--- 147
R+V WT++I A+ + + LL+ + P +
Sbjct: 82 TRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQPNAFTFSSLLNGSTIQPIKSIH 141
Query: 148 ----------DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
D + + ++ GY GD +SA +LFDKMP + ++S+ T+L YA G +
Sbjct: 142 CHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLISFTTMLMCYAKHGKLL 201
Query: 198 SFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+F+ M R+V WNV+I GYA+NG ++ L F++MLVE V PN TL+ VL +
Sbjct: 202 EARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVE-KVKPNVITLLPVLSS 260
Query: 257 CSRLGALDMGKWVHVY---AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI 313
C ++GAL+ G+WVH Y + + VG AL+DMY KCG +E A VF+ +D +D+
Sbjct: 261 CGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLEDARKVFDKIDGKDV 320
Query: 314 ISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQS 373
++WN+MI G A++G + +AL LF +M +P VTF+ +L+AC H GLV G+ F
Sbjct: 321 VAWNSMIMGYAVNGLSEEALKLFHEMHGEGVRPSYVTFIALLTACGHSGLVTKGWEMFNL 380
Query: 374 MVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
M + Y + P++EH+GCM +LLGRAG L +A VR M ++PD VIW +LL ACR H N+
Sbjct: 381 MKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPVIWGTLLWACRLHNNIS 440
Query: 434 IAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
+ E + L+ + + +V+LSNIY G W A+++ M+D+G K PGCS+IE N
Sbjct: 441 LGEEIAEFLLSNDLASSGTYVLLSNIYAAAGNWDGAAKVRSLMKDSGVEKEPGCSIIEVN 500
Query: 494 DSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
+ V EF + D +HP+++ IY L + L+ GY P
Sbjct: 501 NRVHEFIAGDLKHPKSKDIYLMLEEMNSWLKGKGYTP 537
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 169/376 (44%), Gaps = 53/376 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ +F++ + TW ++ + ++ ++ + + +A+M P N FT
Sbjct: 72 LNYSVTLFNRTRNRDVYTWTSIIHAHTQSKLNDQALSYYAQMLTHRIQP-NAFTFS---- 126
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
S ++ + +HC K G ++++ T L++ Y+ G A K+F +MPE++++
Sbjct: 127 SLLNGSTIQPIKSIHCHVIKFGLCSDTYVATGLVDGYARGGDFISAEKLFDKMPEKSLIS 186
Query: 121 WTAMISAYISCGDVGSGRRLLD-LAPERDVVMWSIVISGYIESGDMVSARELFDKM---- 175
+T M+ Y G + R L D + RDVV+W+++I GY ++G LF +M
Sbjct: 187 FTTMLMCYAKHGKLLEARLLFDGMEGNRDVVVWNVMIDGYAQNGFPNECLLLFRRMLVEK 246
Query: 176 --PN--------------------RDVMSW----------------NTLLNGYANSGDVG 197
PN R V S+ L++ Y G +
Sbjct: 247 VKPNVITLLPVLSSCGQVGALESGRWVHSYIKNGKDGVVGVEVRVGTALVDMYCKCGSLE 306
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
KVF+++ ++V +WN +I GYA NG +AL+ F +M EG V P+ T +A+L AC
Sbjct: 307 DARKVFDKIDGKDVVAWNSMIMGYAVNGLSEEALKLFHEMHGEG-VRPSYVTFIALLTAC 365
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCGVIESAVDVFNCLD-RRDII 314
G + G W YK V + ++++ + G ++ A D+ + D +
Sbjct: 366 GHSGLVTKG-WEMFNLMKNEYKMEPRVEHFGCMVNLLGRAGRLQEAYDLVRSMKIDPDPV 424
Query: 315 SWNTMINGLAMHGNTA 330
W T++ +H N +
Sbjct: 425 IWGTLLWACRLHNNIS 440
>Medtr7g109860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:45010556-45008657 | 20130731
Length = 512
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 176/491 (35%), Positives = 262/491 (53%), Gaps = 34/491 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G +FDKMP + +WN M +G+ T + + F +M RA P N +T+ ++R
Sbjct: 56 IGPVHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVP-NDYTISTLLR 114
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ QVH +A G N F+ ++LI Y+ + E +
Sbjct: 115 AVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAG-------------LKEEEAL- 160
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
GR D++ +DV W+ ++S Y+E G V A+ FD+MP R++
Sbjct: 161 ----------------GRAFNDISM-KDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNI 203
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
+SW TL+NGY + V VF++M ERNV SW +I GY +N RF DAL+ F M +
Sbjct: 204 ISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMF-K 262
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
+ PN FT +VL AC+ +L MG +H G ++ +L+DMYAKCG +++
Sbjct: 263 TETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDA 322
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VF + ++++SWN +I G A HG AL FD+MK PD VTFV +LSAC H
Sbjct: 323 AFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRMK-VVGTPDEVTFVNVLSACVH 381
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
GLV +G +F M+ Y I ++EHY CM DL GRAG D+A + ++ MP EPD V+W
Sbjct: 382 AGLVEEGEKHFTDMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWG 441
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+LL AC H N+E+ E A + + LE +P ++ +LS I + G W V L+ M++ G
Sbjct: 442 ALLAACGLHSNLELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERG 501
Query: 481 FRKLPGCSVIE 491
+K S +E
Sbjct: 502 IKKQTAISWVE 512
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 100/186 (53%), Gaps = 2/186 (1%)
Query: 155 VISGYIESGDMVSARELFDK-MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+I+ YI++ ++ A +L D+ + + +++SWN ++ Y +G +F++MP ++ S
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
WN+++ G+ R F QM G VVPND+T+ +L A + + VH A
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRAG-VVPNDYTISTLLRAVISTELDVLVRQVHALA 132
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
+G+ N+FVG++LI YA E+ FN + +D+ SWN +++ G DA
Sbjct: 133 FHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQ 192
Query: 334 SLFDQM 339
+ FDQM
Sbjct: 193 TAFDQM 198
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/377 (22%), Positives = 145/377 (38%), Gaps = 82/377 (21%)
Query: 93 LIEMYSAKGSVGDAYKVFGE-MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVM 151
+I Y +V A+K+ E + N+V W +++AY+ +G L D P +D V
Sbjct: 14 MINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVS 73
Query: 152 WSIVISGYIESGDMVSARELFDKM------PN--------RDVMSW-------------- 183
W+I++SG+ + + F +M PN R V+S
Sbjct: 74 WNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAF 133
Query: 184 -----------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
++L+ YA + + + F ++ ++V SWN L+ Y G+F DA
Sbjct: 134 HLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQT 193
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
AF QM P + N+ L++ Y
Sbjct: 194 AFDQM-------P---------------------------------QRNIISWTTLVNGY 213
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
K + A VF+ + R+++SW MI+G + DAL LF M + +P+ TF
Sbjct: 214 VKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFS 273
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L AC + G L + I + + D+ + G +D A +
Sbjct: 274 SVLDACAGSSSLIMG-LQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFESIR- 331
Query: 413 EPDAVIWTSLLGACRTH 429
+ + V W +++G +H
Sbjct: 332 DKNLVSWNAIIGGYASH 348
>Medtr7g103230.1 | PPR containing plant-like protein | HC |
chr7:41735375-41738881 | 20130731
Length = 970
Score = 322 bits (825), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/568 (32%), Positives = 292/568 (51%), Gaps = 41/568 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD+MPE + A+WN + + + DV LF +M +++FTL + +C+
Sbjct: 219 AFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACA 278
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+G + EG+QVH A K G + + ALI Y+ G + D +F M R+V+ WT
Sbjct: 279 ASGLLMEGKQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTE 338
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----- 178
M+ Y+ G V G ++ D PE++ V +++++SG + + + A ELF +M
Sbjct: 339 MVRVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEGVELT 398
Query: 179 ----------------------------------DVMSWNTLLNGYANSGDVGSFEKVFE 204
+V LL+ Y G + EK++E
Sbjct: 399 DFSLSSGINACSLLADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWE 458
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
E+ E + W ++ GYARNG+ +A F E ++ ++ L ++L C +G D
Sbjct: 459 ELEEVSSVVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLSLCGTVGYHD 518
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
MGK +H G+ N+ VGN +++MY KCG ++ A+ +F+ + DI+SWNT+I+G
Sbjct: 519 MGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVSWNTLISGYL 578
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSAC--THMGLVRDGFLYFQSMVDHYSIIP 382
H AL ++ +M+ +PD +TFV I+SA T + LV D + F SM Y I P
Sbjct: 579 THRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRILFNSMKTVYHIEP 638
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+HY +LG GLL++A+ + KM +P A +W +LL CR HKN I +LA +++
Sbjct: 639 TSQHYSSFISVLGHWGLLEEALETINKMSFKPSAFVWRALLDGCRLHKNTMIGKLAAKNI 698
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSL 502
+ LEP +P+ ++++SN++ GRW R + MR+ GFRK P S I C + FY+
Sbjct: 699 LALEPNDPSTYILVSNLHSSSGRWDCSERTRENMREKGFRKHPAQSWIICRKKMHSFYAR 758
Query: 503 DERHPETESIYRALRGLTMLLRLHGYVP 530
D H + + IYR L L + GY P
Sbjct: 759 DRSHQQDKDIYRGLEILILECLKVGYEP 786
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 221/473 (46%), Gaps = 46/473 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+A ++F PN +++A+ + +S + + + LF M ++ NH+T V+
Sbjct: 114 FSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFLFLHMITVSSLRPNHYTYVAVLT 173
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ ++ G Q+H K G+ + F+ AL+ YS G +A+KVF EMPER++
Sbjct: 174 ACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYSKCGFYKNAFKVFDEMPERDIAS 233
Query: 121 WTAMISAYI---------------------------------SCGDVG---SGRRL---- 140
W ++S + +C G G+++
Sbjct: 234 WNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLSTFLTACAASGLLMEGKQVHAHA 293
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
+ + E ++ + + +I Y GD+ LF++M RDV++W ++ Y G V
Sbjct: 294 VKVGLEDELNVGNALIGFYTNFGDIDDVVCLFERMSVRDVITWTEMVRVYMEFGFVDLGL 353
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
K+F+EMPE+N ++NVL+ G RN A+E F +M+ EG V DF+L + + ACS L
Sbjct: 354 KIFDEMPEKNCVTYNVLLSGLCRNAEGLKAVELFIRMVEEG-VELTDFSLSSGINACSLL 412
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
+ + +H +A G+ N+FV AL+DMY +CG + A ++ L+ + W +M+
Sbjct: 413 ADYRVSRQMHGFAIKFGFGSNVFVEGALLDMYTRCGRMVDAEKMWEELEEVSSVVWTSMM 472
Query: 321 NGLAMHGNTADALSLFDQMKNSREQ--PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
G A +G +A SLF + +S + D V +LS C +G D V +
Sbjct: 473 CGYARNGQPREAFSLF-HLGHSEWKLIMDEVALTSMLSLCGTVG-YHDMGKQIHCQVLKF 530
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
++ + ++ + G +D A+ M D V W +L+ TH+
Sbjct: 531 GFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMA-STDIVSWNTLISGYLTHRQ 582
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 16/295 (5%)
Query: 175 MPNRDVMSWNT-LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ N ++ T L++ Y N ++F N+ S++ LI ++++ R +L
Sbjct: 92 LKNHEIHHLTTALISTYINLRLFSYAHRLFLSQSPPNIVSYSALISAFSKSNREKQSLFL 151
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F M+ + PN +T VAVL AC+R+ L G +H GY ++FV NAL+ Y+
Sbjct: 152 FLHMITVSSLRPNHYTYVAVLTACTRILNLQFGLQLHAAVIKTGYLKSVFVSNALMLFYS 211
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF-DQMKNSREQPDGVTFV 352
KCG ++A VF+ + RDI SWNT+++ D LF D + + D T
Sbjct: 212 KCGFYKNAFKVFDEMPERDIASWNTVMSCAVQEFMYDDVFRLFCDMLVIDGLKVDYFTLS 271
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY----GCMADLLGRAGLLDQAVSFVR 408
L+AC GL+ +G V +++ +E + G +D V
Sbjct: 272 TFLTACAASGLLMEG-----KQVHAHAVKVGLEDELNVGNALIGFYTNFGDIDDVVCLFE 326
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF-VMLSNIYKD 462
+M + D + WT ++ R + +L + E+ KN + V+LS + ++
Sbjct: 327 RMSVR-DVITWTEMV---RVYMEFGFVDLGLKIFDEMPEKNCVTYNVLLSGLCRN 377
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A K+++++ E ++ W +M GY+ R+ LF + ++ L ++
Sbjct: 450 MVDAEKMWEELEEVSSVVWTSMMCGYARNGQPREAFSLFHLGHSEWKLIMDEVALTSMLS 509
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C G G+Q+HC K GF N + ++EMY G+V DA K+F M ++V
Sbjct: 510 LCGTVGYHDMGKQIHCQVLKFGFHSNVQVGNVVVEMYFKCGNVDDAIKMFSGMASTDIVS 569
Query: 121 WTAMISAYISCGDVGSGRRLLDL-------APERDVVMWSIVISGYIESG-DMV-SAREL 171
W +IS Y++ G R L++ + D + + ++IS Y ++ ++V R L
Sbjct: 570 WNTLISGYLT---HRQGDRALEIWLKMQEEGIKPDDITFVLIISAYRQTSLNLVDDCRIL 626
Query: 172 FDKM 175
F+ M
Sbjct: 627 FNSM 630
>Medtr2g013500.1 | PPR containing plant-like protein | HC |
chr2:3639056-3640975 | 20130731
Length = 515
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 172/474 (36%), Positives = 273/474 (57%), Gaps = 14/474 (2%)
Query: 29 TESHRDVVVLFAEMNR--AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWN 86
++SH +V F N+ + ++ NH+T +++C A +G ++H K G ++
Sbjct: 33 SKSHDNVKAFFNLCNQMLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFD 92
Query: 87 SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG---DVGSGRRLLDL 143
F+ L+ Y + V A +VF +P +VV WT++IS CG + +++
Sbjct: 93 GFIKNTLLYFYLSSNDVVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINV 152
Query: 144 APERDVVMWSIVIS---GYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
P ++ +I G I+ G + A L M + +++ +N L+ YA G +
Sbjct: 153 KPNALTLVSAISACSSIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNAR 212
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
VF +M +R+V SW L+ YAR G+ +A+E FKQM+V G+ PN+ T+V VL AC+ +
Sbjct: 213 NVFVKMSKRDVISWTTLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASI 272
Query: 261 GALDMGKWVHVYAES---IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
G+L +G WVH Y E + GN +GNAL++MY KCG ++ + VFN + +D+ISW
Sbjct: 273 GSLSLGCWVHDYIEKRIDLDVDGN--IGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWG 330
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
T+I GLAM+G + +F M PD VTF+G+LSAC+H+GLV +G ++F++M D
Sbjct: 331 TVICGLAMNGYGKQVVQMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDS 390
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAEL 437
Y I+PQ+ HYGCM D+ GRA L ++AV+F++ MP+E + IW++LL AC+TH N E++E
Sbjct: 391 YGIVPQMSHYGCMVDMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEW 450
Query: 438 AFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+ I + +LSNIY RW D ++ MR TG +K+ G S +E
Sbjct: 451 -IRGQIHDKNVGVGTLALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVE 503
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 149/340 (43%), Gaps = 22/340 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF +P P+ +W ++ +G S + + F+ +N N TL + +CS
Sbjct: 112 ATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSIN----VKPNALTLVSAISACS 167
Query: 64 KAGAVREGEQVHCVAAKR-GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
GA++ G+ +H K N A +++Y+ G +A VF +M +R+V+ WT
Sbjct: 168 SIGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWT 227
Query: 123 AMISAYISCGDVGSGRRLL-------DLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
++ AY G G + + P V+ V+S G + + D +
Sbjct: 228 TLLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVV--TVLSACASIGSLSLGCWVHDYI 285
Query: 176 PNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
R D N L+N Y GD+ KVF + ++V SW +I G A NG
Sbjct: 286 EKRIDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHKDVISWGTVICGLAMNGYGKQV 345
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALI 289
++ F MLV G V+P+D T + +L ACS +G + G + +S G M ++
Sbjct: 346 VQMFSHMLVHG-VLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMV 404
Query: 290 DMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
DMY + + E AV + + W+ ++ HGN
Sbjct: 405 DMYGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGN 444
>Medtr3g089880.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:40854327-40856914 | 20130731
Length = 616
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/556 (33%), Positives = 294/556 (52%), Gaps = 48/556 (8%)
Query: 1 MGHARKVFDKMPEPNTATWN-AMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M +K+ N + W+ ++ N + S + +VL+ + + +P ++
Sbjct: 1 MQQVKKIGGITKSFNPSNWSHSIRNNSTNQASLKRALVLYKQTRHDTTH--DPTVIPQLL 58
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
++C + + +H + K G + F+ TA++ Y+ G V DA KVF MPERNVV
Sbjct: 59 KACDSHPFLPYVKSLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVV 118
Query: 120 VWTAMISAYISCGDVGSG-------------------------------RRLLDLAPE-- 146
W AMI Y+ GD S R+ D P
Sbjct: 119 TWNAMIGGYLRNGDAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKVPYEL 178
Query: 147 RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
+DVV+W++++ GY + G+M ARE+F+ MP R+ W++++ GY GDV E +F +
Sbjct: 179 KDVVIWTVMVDGYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
P RN+ WN +I GY +NG ALEAF +M V+G P++FT+V+VL AC++LG LD G
Sbjct: 239 PVRNLEIWNSMIAGYVQNGCGEKALEAFGEMGVDG-FEPDEFTVVSVLSACAQLGDLDAG 297
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
K +H E G N FV + LIDMYAKCG + +A VF + R++ WN MI G A++
Sbjct: 298 KQMHHMIECKGIAVNQFVLSGLIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVN 357
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH 386
G + L D+M+ S + D VTF+ +LSAC H GL+ + M + Y I I H
Sbjct: 358 GQCNEVLEYLDRMQESNIRLDAVTFITVLSACAHGGLMSEALEVISKM-EEYGIEMGIRH 416
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
YGCM DLLGRAG L +A +++MPM+P+ + +++GAC H ++++AE + +I +
Sbjct: 417 YGCMVDLLGRAGKLKEAYELIKRMPMKPNETVLGAMIGACWIHSDMKMAEQVMK-MIGAD 475
Query: 447 PKNPANF--VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDE 504
N V+LSNIY +W+ ++ +M D G K+PG S I ++S V+
Sbjct: 476 SAACVNSHNVLLSNIYAASEKWEKAEMIRSSMVDGGSEKIPGYSSIILSNSAVDL----- 530
Query: 505 RHPETESIYRALRGLT 520
++ I R + GL+
Sbjct: 531 --SISKEISRQMNGLS 544
>Medtr4g032895.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:11375774-11372564 | 20130731
Length = 938
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 293/535 (54%), Gaps = 14/535 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARK F++M + +WNA+ GY E + +F MNR P + + ++
Sbjct: 394 LKEARKQFERMKYRDNISWNAILVGYVQEEEETEAFNMFRRMNRHGVVP-DEVCMASILS 452
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + G Q H ++ K G N F ++LI+MYS G + DA K++ MPE +VV
Sbjct: 453 ACGNIKVLEAGLQFHGLSVKLGLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVS 512
Query: 121 WTAMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
A+I+ Y + D LL L + + ++ +I ES ++ ++ +
Sbjct: 513 MNALIAGY-AIKDTKEAINLLHEMQILGLKPSEITFASLIDCCKESPKVILGMQIHCAIL 571
Query: 177 NRDVMSWN-----TLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDA 230
++ + +LL Y +S + +F E+ +++ W LI G+ +N A
Sbjct: 572 KNGLLCGSEFLGTSLLGMYMDSQKLAEGNILFSELSNLKSIVLWTALISGHTQNDCSDQA 631
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L +++M + +++P+ T V VL AC+ L +L G+ +H G+ + +AL+D
Sbjct: 632 LNLYREMR-DNNILPDQATFVTVLRACALLSSLQDGQEIHSLIFHTGFDLDELTSSALVD 690
Query: 291 MYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
MYAKCG ++SA VF L ++D+ISWN+MI G A +G AL +FD+M S PD V
Sbjct: 691 MYAKCGDVKSAAKVFEELPIKKDVISWNSMIVGFAKNGYAERALKVFDEMTLSSVSPDDV 750
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+G+L+AC+H GLV +G F +MV++YSI P+++H+ CM DLLGR G L++A F+ K
Sbjct: 751 TFLGVLTACSHAGLVSEGRQIFDNMVNYYSIHPRVDHHACMVDLLGRCGFLEEAEEFIDK 810
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
+ +EP+A+IW +LLGAC H + + A + LIELEP+N + +V+L N++ G W +
Sbjct: 811 LDVEPNAMIWANLLGACSIHGDEKRGLRAAEKLIELEPQNSSPYVLLYNMHAGSGHWDEA 870
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
L+ M +K PGCS I + + F + D HP ++ I AL+ L L+R
Sbjct: 871 KSLRRTMVQNEVQKTPGCSWIVVDKTTNLFVASDMSHPSSDEISHALKHLAALMR 925
Score = 142 bits (359), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 212/507 (41%), Gaps = 112/507 (22%)
Query: 35 VVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC---- 90
++ ++ + + + +N F+ + SC+K + G VH K GF+ ++ L
Sbjct: 57 LISTYSRLPQTYTSLINSFS--TTLSSCTKLENLEFGTSVHTSIIKNGFESDTLLTRHLI 114
Query: 91 ------------------------------TALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
TALI Y G DA ++F EM V+
Sbjct: 115 HFYAKCKCLNSARTLFNSVSRLDNLDTATFTALIGGYVRVGMFDDALQLFDEMQSGFVLD 174
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERD----VVMWSIVISGYIESGDMVSARELFDKMP 176
+++ +C ++G +L E D VV W+++ISG+ + G A E + KM
Sbjct: 175 ELVIVTVLNACVNLGKLDHACELFDEMDGCGNVVAWNVMISGHGKRGYHKEAVEFYRKMR 234
Query: 177 NRDVMS---------------------------------------WNTLLNGYANSGDVG 197
V+S ++L+N Y +
Sbjct: 235 MNGVISSRSTLASVLSAVAGLGDLGCGLLVHGEAVKLGFESSVYVASSLINMYGKCEMLC 294
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+KVF+ + +RNV WN ++G YA+NG SD +E F +M+ G+ P++FT ++L +C
Sbjct: 295 DAKKVFDVVCDRNVVMWNTILGVYAQNGCLSDVMELFSEMMGCGND-PDEFTYSSILSSC 353
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
+ LD+G+ +H + N+ V NAL+DMYAK G ++ A F + RD ISWN
Sbjct: 354 ACFDFLDIGRQLHSTIIKKRFTDNLCVNNALVDMYAKAGALKEARKQFERMKYRDNISWN 413
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF------ 371
++ G +A ++F +M PD V ILSAC ++ ++ G +
Sbjct: 414 AILVGYVQEEEETEAFNMFRRMNRHGVVPDEVCMASILSACGNIKVLEAGLQFHGLSVKL 473
Query: 372 ---------QSMVDHYSIIPQIEH----YGCMAD--------LLGRAGLLD--QAVSFVR 408
S++D YS IE Y CM + L+ + D +A++ +
Sbjct: 474 GLDTNLFAGSSLIDMYSKCGGIEDARKIYSCMPEWSVVSMNALIAGYAIKDTKEAINLLH 533
Query: 409 KMP---MEPDAVIWTSLLGACRTHKNV 432
+M ++P + + SL+ C+ V
Sbjct: 534 EMQILGLKPSEITFASLIDCCKESPKV 560
>Medtr1g067280.1 | PPR containing plant-like protein | HC |
chr1:28986458-28983697 | 20130731
Length = 684
Score = 320 bits (819), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 187/575 (32%), Positives = 297/575 (51%), Gaps = 49/575 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAA---AAPLNHFTLPIVV 59
+AR VFDK+P N+ +WN+M Y+ D + LFA + +P N FT+ ++
Sbjct: 102 NARNVFDKIPHKNSFSWNSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDN-FTMTSIL 160
Query: 60 RSCSKAGAV--REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ + + +V + +Q+HC A RGF + + AL+ Y G + A KVF EM ER+
Sbjct: 161 KTLALSSSVCYKSAKQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERD 220
Query: 118 VVVWTAMISAYISCGDVGSGRRLL------------------------------------ 141
+V W AMI Y G +RL
Sbjct: 221 IVTWNAMIGGYSQSGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGME 280
Query: 142 ------DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
D E DV + + +I+ Y + G + ARELFD+M +D +S+ ++++GY +G
Sbjct: 281 VHRFMKDDGIETDVFLCNAIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYMINGF 340
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVL 254
V V + + + +WN +I G +N +F AL+ ++M G ++ PN TL +++
Sbjct: 341 VDEALDVLKGIENPGLSTWNDVIPGMVQNNQFERALDLVREMPGFGLNLKPNVVTLSSII 400
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
S L K VH YA Y N++V A++D YAK G I A VF+ R +I
Sbjct: 401 PLFSYFSNLRGLKEVHGYAIRRSYDQNIYVATAIVDSYAKLGFIHLARRVFDQSQSRSLI 460
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
W ++I A HG+ + AL L++QM + QPD VT +L+AC H GLV + + F +M
Sbjct: 461 IWTSIIYAYASHGDASLALGLYNQMLDRGIQPDPVTLTSVLTACAHSGLVNEAWDVFNAM 520
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEI 434
+ I P +EHY CM +L RAG L +A F+ KMP EP A +W +LL + +VEI
Sbjct: 521 PSKHGIQPVVEHYACMVGVLSRAGKLSEAEKFISKMPFEPTAKVWGALLNGASIYDDVEI 580
Query: 435 AELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
+ A HL E+EP++ N+++++N+Y GRW++ +++ M TG K+ G S IE +
Sbjct: 581 GKFACDHLFEIEPEHTGNYIIMANLYSRAGRWEEARKIRERMEKTGSPKIRGSSWIETSG 640
Query: 495 SVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++ F + D + ++ IY L+GL L+R GY+
Sbjct: 641 KLLGFIAKDMSNEMSDEIYALLKGLLGLMREEGYI 675
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 100/206 (48%), Gaps = 8/206 (3%)
Query: 160 IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
I G + AR F D L+ YA S + + VF+++P +N +SWN +I
Sbjct: 65 IRQGKQLHAR-FFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSWNSMII 123
Query: 220 GYARNGRFSDALEAFKQMLVEGD--VVPNDFTLVAVL--LACSRLGALDMGKWVHVYAES 275
Y F+DAL F + D V P++FT+ ++L LA S K +H A
Sbjct: 124 AYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLALSSSVCYKSAKQIHCSALL 183
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
G+ ++ V NAL+ Y +CG IE A VF+ + RDI++WN MI G + G + L
Sbjct: 184 RGFYSDVCVLNALVTCYCRCGRIEIARKVFDEMTERDIVTWNAMIGGYSQSGFYEECKRL 243
Query: 336 FDQMKNSREQ---PDGVTFVGILSAC 358
+ +M + P+ VT ++ AC
Sbjct: 244 YLEMLGLEGKGILPNAVTIGSVMQAC 269
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 119/262 (45%), Gaps = 42/262 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLT------------------ESHRDVVVLFAEM 42
+ +AR++FD+M E + ++ ++ +GY + + DV+ +
Sbjct: 310 LNYARELFDEMGEKDEVSYRSIISGYMINGFVDEALDVLKGIENPGLSTWNDVIPGMVQN 369
Query: 43 NRAAAA--------------PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF 88
N+ A N TL ++ S +R ++VH A +R + N +
Sbjct: 370 NQFERALDLVREMPGFGLNLKPNVVTLSSIIPLFSYFSNLRGLKEVHGYAIRRSYDQNIY 429
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD----VGSGRRLLDLA 144
+ TA+++ Y+ G + A +VF + R++++WT++I AY S GD +G ++LD
Sbjct: 430 VATAIVDSYAKLGFIHLARRVFDQSQSRSLIIWTSIIYAYASHGDASLALGLYNQMLDRG 489
Query: 145 PERDVVMWSIVISGYIESGDMVSARELFDKMPNRD-----VMSWNTLLNGYANSGDVGSF 199
+ D V + V++ SG + A ++F+ MP++ V + ++ + +G +
Sbjct: 490 IQPDPVTLTSVLTACAHSGLVNEAWDVFNAMPSKHGIQPVVEHYACMVGVLSRAGKLSEA 549
Query: 200 EKVFEEMP-ERNVYSWNVLIGG 220
EK +MP E W L+ G
Sbjct: 550 EKFISKMPFEPTAKVWGALLNG 571
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 121/305 (39%), Gaps = 36/305 (11%)
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ + GK +H + F+ LI YAK +I +A +VF+ + ++ SW
Sbjct: 59 CTNHRLIRQGKQLHARFFPFAITPDNFIATKLITFYAKSNLIRNARNVFDKIPHKNSFSW 118
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQ---PDGVTFVGILSACTHMGLVRDGFLYFQS 373
N+MI DALSLF +S + PD T IL + Y +
Sbjct: 119 NSMIIAYTSKSLFNDALSLFASFVSSTDNNVSPDNFTMTSILKTLA----LSSSVCYKSA 174
Query: 374 MVDHYSII-----PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRT 428
H S + + + R G ++ A +M E D V W +++G
Sbjct: 175 KQIHCSALLRGFYSDVCVLNALVTCYCRCGRIEIARKVFDEM-TERDIVTWNAMIGGYSQ 233
Query: 429 HKNVEIAELAFQHLIELEPKNP-ANFVMLSNIYKDLGRWQDVA---RLKIAMRDTGFRKL 484
E + + ++ LE K N V + ++ + G+ +D++ + M+D G
Sbjct: 234 SGFYEECKRLYLEMLGLEGKGILPNAVTIGSVMQACGQSKDLSFGMEVHRFMKDDGIE-- 291
Query: 485 PGCSVIECNDSVVEFYS-----------LDERHPETESIYRALRGLTMLLRLHGYVPNLV 533
V CN +++ Y+ DE + E YR++ M ++G+V +
Sbjct: 292 --TDVFLCN-AIIAMYAKCGSLNYARELFDEMGEKDEVSYRSIISGYM---INGFVDEAL 345
Query: 534 DVAQG 538
DV +G
Sbjct: 346 DVLKG 350
>Medtr3g011940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3127058-3124158 | 20130731
Length = 845
Score = 319 bits (818), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/537 (33%), Positives = 285/537 (53%), Gaps = 12/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVF+++ E + +W ++ GY+ + + LF M A + TL ++ + +
Sbjct: 172 AFKVFERLSEKDLVSWTSLIAGYAQNGYPKRALDLFYRMQEAGLKA-DSVTLVSILPAVA 230
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+R G+ +H A + GF+ + AL+ MY G A VF M + V W
Sbjct: 231 DIKDLRIGKSIHGYALRLGFESKVSVINALLYMYFECGCERIARLVFEGMINKCAVSWNT 290
Query: 124 MISAYISCGD----VGSGRRLLD--LAPERDVVMWSIVIS---GYIESGDMVSARELFDK 174
MI Y G + ++LD + P R +M ++ G +E G V L K
Sbjct: 291 MIDGYAQIGKSEEAFATFLKMLDEGVEPTRVAIMAALTACADLGDLERGRFVHKLVLQKK 350
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + +V N+LL+ Y+ V +FE + ++ +WN +I GYA+NG ++AL F
Sbjct: 351 L-DFEVPVMNSLLSMYSKCKRVDLAASIFENLKKKTNVTWNAMILGYAQNGCVNEALYLF 409
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
M + +V P+ FTLVAV+ A + L M KW+H A +++V ALIDMYAK
Sbjct: 410 CVMQSQ-EVKPDCFTLVAVITALADLSVNRMAKWIHGLAIRTFMDNDVYVATALIDMYAK 468
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG ++A +F+ + R +I+WN MI+G HG +A+ +FD M+ P+ TF+ +
Sbjct: 469 CGATQTARKLFDMMHERHVITWNAMIDGYGTHGLGKEAIDIFDNMQKEAVIPNDTTFLSV 528
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+SAC+H G V +G +FQSM + Y + P ++HY + DLLGRAG L A + + +MP++P
Sbjct: 529 ISACSHSGFVEEGLHFFQSMKEDYGLEPSMDHYSAVVDLLGRAGKLHGAWNLIEEMPIKP 588
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+ ++LGAC+ HKNVE+ E A L EL+P V+L+N+Y W VA+++
Sbjct: 589 GITVLGAMLGACKIHKNVELGEKAADKLFELDPDEGGYHVLLANMYVSASMWDKVAKVRT 648
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
AM G K PGCS +E + V FYS HP+ + IY L L +R GY+P+
Sbjct: 649 AMEKKGIHKTPGCSFVELRNEVHTFYSGSTNHPQAKKIYAFLEALGDKIRDAGYIPD 705
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 180/377 (47%), Gaps = 15/377 (3%)
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC-TALIEMYSAKGSVGDAYKVFGEMP 114
P ++ C+ + + Q+ + K G +N L T LI M+ GS+ +A VF +
Sbjct: 23 PSLLDHCT---STKHLHQILPLIIKTGSYYNDHLFQTKLINMFFKHGSINEASLVFDTVE 79
Query: 115 ERNVVVWTAMISAYIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE 170
+ V++ AM+ Y C + R+ + V ++ ++ + ++ RE
Sbjct: 80 HKQDVLYHAMLKGYAKNSSLCDALCFYHRMQNDGVRPVVYDFAYLLQLCGKKFELEKGRE 139
Query: 171 LFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ ++ D+ S ++ Y G++ KVFE + E+++ SW LI GYA+NG
Sbjct: 140 IHGQVIVNGFEYDLFSMIGVMGFYVKCGEIDDAFKVFERLSEKDLVSWTSLIAGYAQNGY 199
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
AL+ F +M E + + TLV++L A + + L +GK +H YA +G++ + V N
Sbjct: 200 PKRALDLFYRM-QEAGLKADSVTLVSILPAVADIKDLRIGKSIHGYALRLGFESKVSVIN 258
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
AL+ MY +CG A VF + + +SWNTMI+G A G + +A + F +M + +P
Sbjct: 259 ALLYMYFECGCERIARLVFEGMINKCAVSWNTMIDGYAQIGKSEEAFATFLKMLDEGVEP 318
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
V + L+AC +G + G + +V + ++ + + + +D A S
Sbjct: 319 TRVAIMAALTACADLGDLERG-RFVHKLVLQKKLDFEVPVMNSLLSMYSKCKRVDLAASI 377
Query: 407 VRKMPMEPDAVIWTSLL 423
+ + + V W +++
Sbjct: 378 FENLKKKTN-VTWNAMI 393
>Medtr8g068150.1 | SLOW growth protein, putative | HC |
chr8:28404022-28408146 | 20130731
Length = 633
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 197/566 (34%), Positives = 310/566 (54%), Gaps = 54/566 (9%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESH-RDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+F ++ P+ WNA+ YS S + LF M ++ P + FT P ++++C+
Sbjct: 71 LFTQITNPDIFLWNAIIKAYSQIHSPPQHPFSLFKTMLNSSVLP-DSFTFPFLLKACANV 129
Query: 66 --GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A + G QVHC + GF + F+ AL+ Y G V +AYKVF E R+ V +
Sbjct: 130 LISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGFGDVVNAYKVFDESFVRDCVSFNT 189
Query: 124 MISAYISCGDVGS-----------------------------------GRRLLDLAPER- 147
MI+ + GDV GR++ L
Sbjct: 190 MINGFARKGDVSGCFRVFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYREL 249
Query: 148 -----DVVMWSIVISGYIESGDMVSARELFDKM-PNRDVMS-WNTLLNGYANSGDVGSFE 200
+V++ + ++ Y + G +V A + + P + V++ W +L++ YA G+V
Sbjct: 250 GCFGGNVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVAR 309
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVVPNDFTLVAVLLACSR 259
++F++M ER+V SW +I GY+ G F +ALE F ++ EG + P++ +VA L AC+R
Sbjct: 310 RLFDQMGERDVVSWTAMISGYSHAGCFQEALELFVKL--EGLGMKPDEVAVVAALSACAR 367
Query: 260 LGALDMGKWVH-VYA-ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--DRRDIIS 315
LGAL++G+ +H YA E+ N +A++DMYAKCG I+ A+DVF D++
Sbjct: 368 LGALELGRRIHRQYAGENWTCSINRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFL 427
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
+N++I+GLA HG A +LF++M +PD +TFV +LSAC H GLV G F+SM
Sbjct: 428 YNSIISGLAHHGRGEYAKNLFEEMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMF 487
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
Y + P++EHYGCM DLLGRAG LD+A + KMP + +AVIW +LL AC+ H +V +A
Sbjct: 488 TVYGVSPEMEHYGCMVDLLGRAGHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALA 547
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
+A L+EL+ + A +VMLSN+ D + + A L+ A+ + G +K PG S +E N S
Sbjct: 548 RVASYELVELQHDHGAGYVMLSNMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRS 607
Query: 496 VVEFYSLDERHPETESIYRALRGLTM 521
+ +F + D+ HPE ++ LR + +
Sbjct: 608 LHKFLAGDKSHPEAKTTELMLRDINI 633
>Medtr8g089940.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37579244-37581349 | 20130731
Length = 701
Score = 318 bits (815), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 179/539 (33%), Positives = 300/539 (55%), Gaps = 22/539 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+++FDKM + + +WNA+ + Y+ D+ ++F M A +++ T+ S
Sbjct: 85 AQQLFDKMSKRDIYSWNALLSAYAKVGLVEDLNLVFDRM--ACRDSVSYNTMIACFASNW 142
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-------LCTALIEMYSAKGSVGDAYKVFGEMPER 116
+G + + + GF+ + C+ L++ K G V GE E+
Sbjct: 143 LSG---KALRFFVRMQEDGFRPTQYSYVNALQACSQLLDFRLGKQIHGRV--VVGEF-EK 196
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
NV VW A+ Y CGD+ R L D +++V W+++ISGY++ G F+KM
Sbjct: 197 NVFVWNAVTDLYAKCGDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQ 256
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D ++ +++LN Y SG V +F+++ +++ W +I GYA++GR DAL
Sbjct: 257 LSGLKPDQVTVSSVLNAYFQSGRVDDARNMFDKIDKKDEICWTTMIVGYAQSGREEDALM 316
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +ML G+V P+ T+ V+ +C++L +L G+ VH +G NM V +AL+DMY
Sbjct: 317 LFSEML-RGNVRPDSHTISTVVSSCAKLASLYHGQAVHGKVILMGVDSNMLVSSALVDMY 375
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KCGV A +F + +++I WN+MI G A +G +AL+L+++M +PD ++FV
Sbjct: 376 CKCGVPLDARVIFETMPIKNVIIWNSMILGYAQNGEAEEALTLYERMLQENFKPDNISFV 435
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+LSAC + +V++G +F S+ + + P ++HY CM LLGR+G +D+A+ ++ MP
Sbjct: 436 GVLSACINTNMVKEGRKHFDSISEQ-GMTPTLDHYACMIILLGRSGNIDKALDLIKGMPH 494
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+PD IW++LL C + +++ AE+A H+ +L+P N +++MLSN+Y GRW+DVA +
Sbjct: 495 KPDCRIWSALLSVC-SKGDIKTAEVAANHIFQLDPHNAGSYIMLSNLYAACGRWKDVAVV 553
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ M+ +K S +E V F S D HPE E IY L L +L+ GY P+
Sbjct: 554 RSLMKSKNAKKFSAYSWVEIGKKVHRFVSDDHNHPEMEKIYSELNRLIGILQQIGYNPD 612
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 132/252 (52%), Gaps = 6/252 (2%)
Query: 121 WTAMISAYISCGDVGSGRRL-----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
+T ++ D +RL L L D + + ++ Y + G + A++LFDKM
Sbjct: 33 YTRLVLHCAQSNDFNQAKRLQSHMELQLFQPTDSFIHNQLLHLYAKCGKISDAQQLFDKM 92
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
RD+ SWN LL+ YA G V VF+ M R+ S+N +I +A N AL F
Sbjct: 93 SKRDIYSWNALLSAYAKVGLVEDLNLVFDRMACRDSVSYNTMIACFASNWLSGKALRFFV 152
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M +G P ++ V L ACS+L +GK +H ++ N+FV NA+ D+YAKC
Sbjct: 153 RMQEDG-FRPTQYSYVNALQACSQLLDFRLGKQIHGRVVVGEFEKNVFVWNAVTDLYAKC 211
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G I+ A +F+ + ++++SWN MI+G G + +S F++M+ S +PD VT +L
Sbjct: 212 GDIDRARWLFDGMVNKNLVSWNLMISGYVKMGKPDECISFFNKMQLSGLKPDQVTVSSVL 271
Query: 356 SACTHMGLVRDG 367
+A G V D
Sbjct: 272 NAYFQSGRVDDA 283
>Medtr8g089960.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:37592279-37594828 | 20130731
Length = 572
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 287/529 (54%), Gaps = 17/529 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIVVRSC 62
AR++FDK + + T+N+M Y + LF + P+ N + ++ +C
Sbjct: 48 ARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNSI------PIKNIVSWNSIITAC 101
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + + ++ + + + ++M G V +A KVF E+P NVV +T
Sbjct: 102 IQNDNINDAFSYFTAMPEKNVASYNAMMSGFVKM----GRVEEAKKVFEEIPRPNVVSYT 157
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
MI Y+ + GSG R L D P R+ V W+++ISG +E+G A E+F +MP +
Sbjct: 158 VMIDGYMKM-EGGSGIKRARALFDAMPSRNEVSWTVMISGLVENGLHEEAWEVFVRMPQK 216
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+V+++ ++ G+ G + +F+++ ++ WN++I G+A+NGR +AL F QM+
Sbjct: 217 NVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEEALNLFSQMV 276
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G + P+D T V++ AC+ L LD G+ + A G ++ V NAL+ MY+KCG I
Sbjct: 277 RTG-MQPDDLTFVSLFTACASLALLDEGRQTNALAIKHGLNSDLSVSNALVTMYSKCGEI 335
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ F+ + DI+SWNT+I A HG A FD M + PDG+TF+ +LSAC
Sbjct: 336 VISELAFDQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMVTAGVTPDGITFLNLLSAC 395
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
G V + F MV Y I+P+ EHY C+ D++ RAG L +A +++MP E DA I
Sbjct: 396 CRAGKVDETVNLFDLMVHKYGILPRSEHYSCVVDVMSRAGQLLRACKVIQEMPFEADASI 455
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W + L C H NV++ ELA + ++ L+P N +VM+SNIY G+W+DV R+++ M++
Sbjct: 456 WGAFLVGCNIHSNVKLGELAARSILNLDPYNSGAYVMMSNIYAAAGKWKDVNRMRVLMKE 515
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
G +K S ++ + + F D HP + I+ A +T+ ++ G
Sbjct: 516 QGIKKQTAYSWMQIGNKLQCFVGGDPSHPNIDDIHDASMMITLHMKAKG 564
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 171/353 (48%), Gaps = 14/353 (3%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
I S G++ A ++F + ++++V + +M++AY G + + L + P +++V W+
Sbjct: 36 ITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSLFNSIPIKNIVSWN 95
Query: 154 IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+I+ I++ ++ A F MP ++V S+N +++G+ G V +KVFEE+P NV S
Sbjct: 96 SIITACIQNDNINDAFSYFTAMPEKNVASYNAMMSGFVKMGRVEEAKKVFEEIPRPNVVS 155
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVP--NDFTLVAVLLACSRLGALDMGKWVHV 271
+ V+I GY + + K+ D +P N+ + ++ G + V V
Sbjct: 156 YTVMIDGYMK----MEGGSGIKRARALFDAMPSRNEVSWTVMISGLVENGLHEEAWEVFV 211
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
+ N+ A+I + K G I+ A ++F + +D WN MI G A +G +
Sbjct: 212 RMP----QKNVVAFTAMITGFCKQGKIDEAWNLFQQIRCKDRACWNIMITGFAQNGRGEE 267
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL+LF QM + QPD +TFV + +AC + L+ +G + H + + +
Sbjct: 268 ALNLFSQMVRTGMQPDDLTFVSLFTACASLALLDEGRQTNALAIKH-GLNSDLSVSNALV 326
Query: 392 DLLGRAG-LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
+ + G ++ ++F PD V W +++ A H + A F H++
Sbjct: 327 TMYSKCGEIVISELAF--DQISHPDIVSWNTIIAAFAQHGLYDRARYYFDHMV 377
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 142/295 (48%), Gaps = 30/295 (10%)
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ ++DV ++ I+ +G++ +AR+LFDK +D++++N++L Y +G + + +
Sbjct: 23 FSTQQDVYFANLNITALSRAGNITAARQLFDKTSQKDIVTYNSMLTAYWQNGFLQHSKSL 82
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F +P +N+ SWN +I +N +DA F M E +V + A++ ++G
Sbjct: 83 FNSIPIKNIVSWNSIITACIQNDNINDAFSYFTAM-PEKNVASYN----AMMSGFVKMGR 137
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC---GVIESAVDVFNCLDRRDIISWNTM 319
++ K V E I + N+ +ID Y K I+ A +F+ + R+ +SW M
Sbjct: 138 VEEAKKVF---EEIP-RPNVVSYTVMIDGYMKMEGGSGIKRARALFDAMPSRNEVSWTVM 193
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I+GL +G +A +F +M Q + V F +++ G + + + FQ +
Sbjct: 194 ISGLVENGLHEEAWEVFVRMP----QKNVVAFTAMITGFCKQGKIDEAWNLFQQI----- 244
Query: 380 IIPQIEHYGC---MADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRT 428
+ + C M + G ++A++ +M M+PD + + SL AC +
Sbjct: 245 ---RCKDRACWNIMITGFAQNGRGEEALNLFSQMVRTGMQPDDLTFVSLFTACAS 296
>Medtr4g085110.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:33294066-33291364 | 20130731
Length = 814
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 287/537 (53%), Gaps = 11/537 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD MPE + WN++ GY ++V+ LF EM P + T+ ++++C
Sbjct: 192 ARMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEMISCGIRP-SSVTMASILKACG 250
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++G + G VH G + F+ T+L++MY G A+ VF M R+++ W A
Sbjct: 251 ESGHKKLGTCVHVFVLALGMGDDVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNA 310
Query: 124 MISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FDKM 175
MIS + G V +L+ D +I G ++ D+ + + L K
Sbjct: 311 MISGCVQNGMVPESFSLFHKLVQSGDGFDSGTLVSLIRGCSQTSDLENGKVLHACIIRKG 370
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+++ +++ Y+ G + VF M +RNV +W ++ G ++NG AL+ F
Sbjct: 371 LESNLVLSTAIVDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFC 430
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M E +V N TLV+++ C+ LG+L G+ VH + GY+ N +ALIDMYAKC
Sbjct: 431 RMQ-EENVAANSVTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKC 489
Query: 296 GVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G I SA +F N +D+I N+MI G MHG AL ++D+M + R +P+ TFV +
Sbjct: 490 GKIHSAEKLFYNGFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSM 549
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+AC+H GLV +G F M ++I P +HY C DLL RAG L++A + V+++P+EP
Sbjct: 550 LTACSHSGLVEEGRTLFHCMERVHNIKPSDKHYACFVDLLSRAGYLEEAYALVKQIPVEP 609
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+ +LLG CR HKN+ + LI L+ N +VMLSNIY + RW+ V ++
Sbjct: 610 SIDVLEALLGGCRIHKNINMGIQIADRLISLDYLNTGIYVMLSNIYSEARRWESVNYIRG 669
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
MR G +K P S+ E + V F++ D+ HP E+I + L L + + GYV +
Sbjct: 670 LMRKRGLKKTPAFSLTEVGNQVFTFFAGDDSHPGWENIKQLLENLRLEVEASGYVAD 726
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 142/507 (28%), Positives = 239/507 (47%), Gaps = 57/507 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A KVFD+ P T NAM G+ +++V LF M LN +T ++
Sbjct: 88 LNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMG-LRDIELNSYTCVFGLK 146
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G ++ +A ++GF + + +++I G++ DA VF MPER+VV
Sbjct: 147 ACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDARMVFDGMPERDVVC 206
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE--------RDVVMWSIVI----SGYIESGDMVSA 168
W ++I Y+ G + + ++ L E V M SI+ SG+ + G V
Sbjct: 207 WNSIIGGYVQEGLL---KEVIQLFVEMISCGIRPSSVTMASILKACGESGHKKLGTCVHV 263
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
L M + DV +L++ Y N GD S VF M R++ SWN +I G +NG
Sbjct: 264 FVLALGMGD-DVFVLTSLVDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVP 322
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
++ F +++ GD + TLV+++ CS+ L+ GK +H G + N+ + A+
Sbjct: 323 ESFSLFHKLVQSGDGFDSG-TLVSLIRGCSQTSDLENGKVLHACIIRKGLESNLVLSTAI 381
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+DMY+KCG I+ A DVF +++R++I+W M+ GL+ +G AL LF +M+ +
Sbjct: 382 VDMYSKCGAIKQASDVFRTMEKRNVITWTAMLVGLSQNGYAEGALKLFCRMQEENVAANS 441
Query: 349 VTFVGILSACTHMG-----------LVRDGFLY----FQSMVDHYSIIPQIE-------- 385
VT V ++ C H+G L+R G+ + +++D Y+ +I
Sbjct: 442 VTLVSLVHCCAHLGSLKKGRSVHGHLIRHGYEFNAVNMSALIDMYAKCGKIHSAEKLFYN 501
Query: 386 --HYG----CMADLLGRA--GLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNVEI 434
H C + ++G G QA+ +M ++P+ + S+L AC VE
Sbjct: 502 GFHLKDVILCNSMIMGYGMHGQGHQALRVYDRMIDERLKPNQTTFVSMLTACSHSGLVEE 561
Query: 435 AELAFQ-----HLIELEPKNPANFVML 456
F H I+ K+ A FV L
Sbjct: 562 GRTLFHCMERVHNIKPSDKHYACFVDL 588
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 161/375 (42%), Gaps = 73/375 (19%)
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER 147
FL T LI++YS G + AYKVF + P R ++ AM+ ++ + +L + R
Sbjct: 73 FLATKLIKIYSNLGFLNYAYKVFDQCPHRETILCNAMMGGFLKNMEYKEVPKLFKMMGLR 132
Query: 148 DVVM---------------------------------------WSIVISGYIESGDMVSA 168
D+ + S +I+ ++ G++ A
Sbjct: 133 DIELNSYTCVFGLKACTVLLDDEVGMELVRMAVRKGFHLHPHVGSSMINFLVKCGNLNDA 192
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
R +FD MP RDV+ WN+++ GY G + ++F EM
Sbjct: 193 RMVFDGMPERDVVCWNSIIGGYVQEGLLKEVIQLFVEM---------------------- 230
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ + P+ T+ ++L AC G +G VHV+ ++G ++FV +L
Sbjct: 231 ----------ISCGIRPSSVTMASILKACGESGHKKLGTCVHVFVLALGMGDDVFVLTSL 280
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+DMY G ESA VFN + R +ISWN MI+G +G ++ SLF ++ S + D
Sbjct: 281 VDMYCNVGDTESAFLVFNRMCSRSLISWNAMISGCVQNGMVPESFSLFHKLVQSGDGFDS 340
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
T V ++ C+ + +G + + + + + + D+ + G + QA R
Sbjct: 341 GTLVSLIRGCSQTSDLENGKV-LHACIIRKGLESNLVLSTAIVDMYSKCGAIKQASDVFR 399
Query: 409 KMPMEPDAVIWTSLL 423
M + + + WT++L
Sbjct: 400 TME-KRNVITWTAML 413
>Medtr4g064770.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:24165948-24164077 | 20130731
Length = 550
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 177/498 (35%), Positives = 276/498 (55%), Gaps = 42/498 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNH-FTLPIVVRSC 62
ARK+FDK+P+ N W A+ + H + +F+EM N F +P V+++C
Sbjct: 83 ARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKAC 142
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G GEQVHC+ K F+ ++F+ +ALI MYS
Sbjct: 143 GHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYS------------------------ 178
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NR 178
CG+V R++ D +D+V + V+SGY + G A L + M N
Sbjct: 179 -------KCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNP 231
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVF----EEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+V++WN L++G+A D ++F E+ E +V SW ++ G+ +N R +A +AF
Sbjct: 232 NVVTWNALISGFAQKCDREMVSEIFRLMNEDRVEPDVVSWTSVLSGFVQNFRNEEAFDAF 291
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K+ML+ G P T+ A+L AC+ + GK +H YA IG + +++V +AL+DMYAK
Sbjct: 292 KKMLLLG-FCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAK 350
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSREQPDGVTFVG 353
CG I A +F + ++ ++ N+MI G A HG +A+ LF+QM+ + D +TF
Sbjct: 351 CGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTA 410
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
L+AC+H+G + G F+ M + Y I P++EHY CM DL GRAG L++A ++ MP++
Sbjct: 411 ALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSMPVK 470
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
PD +W +LL ACR H +VE+AE+A +HL ELEP++ N ++LS++Y D G W V R+K
Sbjct: 471 PDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVERIK 530
Query: 474 IAMRDTGFRKLPGCSVIE 491
++ RKL G S I+
Sbjct: 531 RRIKKGKLRKLQGLSWID 548
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 5/210 (2%)
Query: 152 WSIVISGYIESGDMVSARELFDKMPNRDVMSWN----TLLNGYANSGDVGSFEKVFEEMP 207
++ +I Y S + ++L + + +N L+ Y G + K+F+++P
Sbjct: 32 YAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIP 91
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND-FTLVAVLLACSRLGALDMG 266
+ N++ W LI AR G ALE F +M D N F + +VL AC +G G
Sbjct: 92 QTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYG 151
Query: 267 KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMH 326
+ VH ++ + FV +ALI MY+KCG + A VF+ + +D+++ N +++G A
Sbjct: 152 EQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDLVAMNAVVSGYAQQ 211
Query: 327 GNTADALSLFDQMKNSREQPDGVTFVGILS 356
G +ALSL + MK P+ VT+ ++S
Sbjct: 212 GLPNEALSLVENMKLMGVNPNVVTWNALIS 241
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 10/154 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR +F KMPE NT T N+M GY+ + + LF +M L+H T +
Sbjct: 354 ISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLTFTAALT 413
Query: 61 SCSKAGAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
+CS G + G+++ + ++ + + C +++++ G + +AY + MP +
Sbjct: 414 ACSHVGDIELGQRLFKIMQEKYCIEPRLEHYAC--MVDLFGRAGKLEEAYGIIKSMPVKP 471
Query: 117 NVVVWTAMISAYISCGDVG----SGRRLLDLAPE 146
++ VW A+++A + G V + + L +L PE
Sbjct: 472 DLFVWGALLAACRNHGHVELAEVAAKHLSELEPE 505
>Medtr1g071240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:31582853-31578503 | 20130731
Length = 1126
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 282/534 (52%), Gaps = 9/534 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF M + +WN + +G + + D + F +M + P L ++
Sbjct: 302 MEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAA 361
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
S ++ + G +VH A K G N + +LI+MY V F MPE++++
Sbjct: 362 S-GRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLIS 420
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN--- 177
WT +I+ Y LL + + ++I + + + + +L ++
Sbjct: 421 WTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYVL 480
Query: 178 ----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
D++ N ++N Y V VFE + +++ SW +I NG +ALE
Sbjct: 481 KGGLADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALEL 540
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F L+E ++ P+ TLV+VL A + L +L GK +H + G+ + N+L+DMYA
Sbjct: 541 FNS-LIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYA 599
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+CG +E+A ++FN + +RD+I W +MIN MHG DA+ LF +M + PD +TF+
Sbjct: 600 RCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLA 659
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H GLV +G +F+ M + Y + P EHY C+ DLL R+ L++A FVR MP+E
Sbjct: 660 LLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIE 719
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
P A +W +LLGACR H N ++ E+A + L++L +N N+V++SN + GRW DV ++
Sbjct: 720 PSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVR 779
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
M+ +K PGCS IE + + F + D+ HP+ +IY L T LL+ G
Sbjct: 780 SIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKG 833
Score = 187 bits (475), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 146/470 (31%), Positives = 223/470 (47%), Gaps = 45/470 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFDKM E TWNAM + + + L+ EM R L+ FT P V+++C
Sbjct: 101 AVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEM-RVLGVSLDAFTFPCVLKACG 159
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF--GEMPERNVVVW 121
R G ++H VA K G+ F+C ALI MY+ G +G A +F G M + + V W
Sbjct: 160 AFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSW 219
Query: 122 TAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISG-----YIESGDMVSARELF 172
++ISA++ G+ + RR+ ++ E + + + +I+ G + A +
Sbjct: 220 NSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAV-IL 278
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
DV N L+ YAN G + E+VF+ M ++ SWN L+ G +N +SDA+
Sbjct: 279 KSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAIN 338
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F+ M G P+ +++ ++ A R L G VH YA G NM +GN+LIDMY
Sbjct: 339 HFQDMQDSGQK-PDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMY 397
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KC ++ F + +D+ISW T+I G A + DAL+L +++ + D +
Sbjct: 398 GKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG 457
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY---GCMADLL---------GRAGLL 400
IL AC+ GL + +I +I Y G +AD+L G L+
Sbjct: 458 SILLACS--GLKSE------------KLIKEIHGYVLKGGLADILIQNAIVNVYGELALV 503
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA-FQHLIE--LEP 447
D A + D V WTS++ C H + I L F LIE +EP
Sbjct: 504 DYARHVFESIN-SKDIVSWTSMITCC-VHNGLAIEALELFNSLIETNIEP 551
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 214/470 (45%), Gaps = 48/470 (10%)
Query: 1 MGHARKVFDK--MPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
+G AR +FD M + + +WN++ + + + + LF M N +T
Sbjct: 199 LGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVES-NTYTFVSA 257
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+++C ++ G +H V K + ++ ALI MY+ G + DA +VF M ++
Sbjct: 258 LQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDC 317
Query: 119 VVWTAMISAYIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
V W ++S + + + + D + D V +I+ S ++++ E+
Sbjct: 318 VSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAY 377
Query: 175 MPNRDVMS----WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ S N+L++ Y V FE MPE+++ SW +I GYA+N DA
Sbjct: 378 AIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDA 437
Query: 231 LEAFKQMLVEG-DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
L +++ +E DV P + ++LLACS L + + K +H Y G ++ + NA++
Sbjct: 438 LNLLRKVQLEKMDVDP--MMIGSILLACSGLKSEKLIKEIHGYVLKGGL-ADILIQNAIV 494
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
++Y + +++ A VF ++ +DI+SW +MI +G +AL LF+ + + +PD +
Sbjct: 495 NVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLI 554
Query: 350 TFVGILSACT-----------HMGLVRDGF----LYFQSMVDHYSIIPQIE------HYG 388
T V +L A H L+R GF L S+VD Y+ +E +Y
Sbjct: 555 TLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYV 614
Query: 389 CMADLL---------GRAGLLDQAVSFVRKMPME---PDAVIWTSLLGAC 426
DL+ G G A+ KM E PD + + +LL AC
Sbjct: 615 KQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYAC 664
Score = 142 bits (358), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 191/426 (44%), Gaps = 43/426 (10%)
Query: 29 TESHRDVVVLFAEMNRAAAAPLNHF---TLPIVVRS------------CSKAGAVREGEQ 73
T SHR + + + A L HF LP R C+ A+ +G+Q
Sbjct: 14 TFSHRPISL------KEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCASHKALPQGQQ 67
Query: 74 VHCVAAKRGFKWNS-FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
+H K +S FL T + MY GS DA KVF +M ER + W AMI A +S G
Sbjct: 68 LHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAG 127
Query: 133 DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS--------WN 184
L V + + +++ R L ++ V N
Sbjct: 128 RYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCN 187
Query: 185 TLLNGYANSGDVGSFEKVFEE--MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
L+ YA GD+G +F+ M + + SWN +I + G +AL F++M G
Sbjct: 188 ALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVG- 246
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V N +T V+ L AC + +G+ +H + +++V NALI MYA CG +E A
Sbjct: 247 VESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDAE 306
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF + +D +SWNT+++G+ + +DA++ F M++S ++PD V+ + +++A
Sbjct: 307 RVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMIAASG--- 363
Query: 363 LVRDGFLYFQSMVDHYSIIPQIE---HYG-CMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
R L V Y+I I+ H G + D+ G+ + S MP E D +
Sbjct: 364 --RSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMP-EKDLIS 420
Query: 419 WTSLLG 424
WT+++
Sbjct: 421 WTTIIA 426
>Medtr1g040565.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15020896-15019352 | 20130731
Length = 514
Score = 317 bits (812), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/471 (36%), Positives = 261/471 (55%), Gaps = 29/471 (6%)
Query: 85 WNSFLCTALIEMYSAKGSVGDAYKVFGEMPER----NVVVWTAMISAY----ISCGDVGS 136
WN A++ YS G DA +FG+M E +VV W+++IS Y C +
Sbjct: 19 WN-----AMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISGYAQRGFGCEAMDV 73
Query: 137 GRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF-----------DKMPNRDVMSWNT 185
R++ + +VV ++SG G ++ +E N D+ N
Sbjct: 74 FRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGEHNDDNDDLAGINA 133
Query: 186 LLNGYANSGDVGSFEKVFEEM--PERNVYSWNVLIGGYARNGRFSDALEAFKQML-VEGD 242
L++ YA + +F+E+ +R+V +W V+IGGYA+ G + AL+ F +M +
Sbjct: 134 LIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHALQLFSEMFKFDNC 193
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYA--ESIGYKGNMFVGNALIDMYAKCGVIES 300
+VPNDFT+ VL+AC+RL AL GK +H Y S +FV N LIDMY+K G +++
Sbjct: 194 IVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDT 253
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VF+ + +R+ ISW +++ G MHG + DA +FD+M+ DG+TF+ +L AC+H
Sbjct: 254 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALVLDGITFLVVLYACSH 313
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
G+V G F M + + P +EHY CMADL GRAG L +A + M MEP V+W
Sbjct: 314 SGMVDRGIDLFYRMSKDFVVDPGVEHYACMADLFGRAGRLCEATRLINDMSMEPTPVVWI 373
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
+LL ACRTH NVE+AE A + L+EL+ N + +LSNIY + RW+DVAR++ M+ TG
Sbjct: 374 ALLSACRTHSNVELAEFAAKKLLELKADNDGTYTLLSNIYANARRWKDVARIRYLMKRTG 433
Query: 481 FRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+K PG S ++ + FY D H +++ IY L L ++ GYVP
Sbjct: 434 IKKRPGWSWVQGRKGMETFYVGDRTHSQSQKIYETLADLIQRIKAIGYVPQ 484
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 151/298 (50%), Gaps = 26/298 (8%)
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGD----VGSFEKVFEEMPERNVYSWNVLIGG 220
M A +++++M +DV++WN ++ GY+ +G + F K+ EE E +V +W+ +I G
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
YA+ G +A++ F+QM PN TL+++L C+ +GAL GK H Y+ KG
Sbjct: 61 YAQRGFGCEAMDVFRQM-CGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKG 119
Query: 281 -------NMFVGNALIDMYAKCGVIESAVDVFN--CLDRRDIISWNTMINGLAMHGNTAD 331
++ NALIDMYAKC +E A +F+ C RD+++W MI G A +G+
Sbjct: 120 EHNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH 179
Query: 332 ALSLFDQMKNSRE--QPDGVTFVGILSACTHMGLVRDG-----FLYFQSMVDHYSIIPQI 384
AL LF +M P+ T +L AC + +R G ++ +S +D +
Sbjct: 180 ALQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVA- 238
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
C+ D+ ++G +D A M + +A+ WTSLL H E A F +
Sbjct: 239 ---NCLIDMYSKSGDVDTAQVVFDSMS-KRNAISWTSLLTGYGMHGCSEDAFRVFDEM 292
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 166/419 (39%), Gaps = 96/419 (22%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNR---------------- 44
M A KV+++M + TWNAM GYS D + LF +M
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREERIELDVVTWSSVISG 60
Query: 45 ------------------AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKW- 85
+ N TL ++ C+ GA+ G++ HC + K K
Sbjct: 61 YAQRGFGCEAMDVFRQMCGCSCRPNVVTLMSLLSGCASVGALLHGKETHCYSIKFILKGE 120
Query: 86 ----NSFLC--TALIEMYSAKGSVGDAYKVFGEM--PERNVVVWTAMISAYISCGDVGSG 137
N L ALI+MY+ S+ A +F E+ +R+VV WT MI Y GD
Sbjct: 121 HNDDNDDLAGINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANHA 180
Query: 138 RRLLDLAPERD-----------VVMWSIVISGYIESGDMVSARELFDKMPNRDVM-SWNT 185
+L + D V+ + + G + A L + DV+ N
Sbjct: 181 LQLFSEMFKFDNCIVPNDFTISCVLMACARLAALRFGKQIHAYVLRRSRIDSDVLFVANC 240
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ Y+ SGDV + + VF+ M +RN SW L+ GY +G DA F +M E +V
Sbjct: 241 LIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEA-LVL 299
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY---AKCGVIESAV 302
+ T + VL ACS G +D G ID++ +K V++ V
Sbjct: 300 DGITFLVVLYACSHSGMVDRG----------------------IDLFYRMSKDFVVDPGV 337
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC-TH 360
+ + C M + G +A L + M +P V ++ +LSAC TH
Sbjct: 338 EHYAC-----------MADLFGRAGRLCEATRLINDMSM---EPTPVVWIALLSACRTH 382
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 11/153 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ VFD M + N +W ++ GY + D +F EM R A L+ T +V+ +CS
Sbjct: 254 AQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEM-RKEALVLDGITFLVVLYACS 312
Query: 64 KAGAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVV 119
+G V G + +K + C A +++ G + +A ++ +M E V
Sbjct: 313 HSGMVDRGIDLFYRMSKDFVVDPGVEHYACMA--DLFGRAGRLCEATRLINDMSMEPTPV 370
Query: 120 VWTAMISAYISCGDVG----SGRRLLDLAPERD 148
VW A++SA + +V + ++LL+L + D
Sbjct: 371 VWIALLSACRTHSNVELAEFAAKKLLELKADND 403
>Medtr7g011030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:2861060-2858958 | 20130731
Length = 700
Score = 316 bits (809), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 185/543 (34%), Positives = 288/543 (53%), Gaps = 17/543 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+M + ++N + GY + H +VV LF M + P N + V+ +C+
Sbjct: 74 ARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQP-NEYVFTTVLSACA 132
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF----GEMPERN-V 118
+G V EG Q H K G ++ F+ ++L+ MYS V A +V G + N
Sbjct: 133 HSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDA 192
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIV------ISGYIES---GDMVSAR 169
+ ++++A + G +G +L + VV S+ + G I G V A
Sbjct: 193 FCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHA- 251
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+L DV + L++ + GDV S KVF+ + RNV W L+ Y +NG F +
Sbjct: 252 QLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEE 311
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
L M EG + N+FT +L A + + AL G +H E +G K + VGNALI
Sbjct: 312 TLNLLSCMDREG-TMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALI 370
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+MY+KCG I+S+ DVF + RDII+WN MI G + HG AL LF M ++ E P+ V
Sbjct: 371 NMYSKCGCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHV 430
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TFVG+LSAC H+ LV +GF Y ++ H+ + P +EHY C+ +L RAG+L++A +F+R
Sbjct: 431 TFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRT 490
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
++ D V W LL AC H+N + + +++++P++ + +LSN+Y W V
Sbjct: 491 TQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSV 550
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++ MR+ +K PG S IE ++V F S HPE IY ++ L +++ GYV
Sbjct: 551 TMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYV 610
Query: 530 PNL 532
PN+
Sbjct: 611 PNI 613
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 122/254 (48%), Gaps = 12/254 (4%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+++ N+L+N Y + +F+EM R+V S+NVL+GGY +G + ++ FK M
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNM- 112
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
V PN++ VL AC+ G + G H + G + FV ++L+ MY+KC +
Sbjct: 113 VSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHV 172
Query: 299 ESAVDVF-----NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+ A+ V N + D +N+++N L G +A+ + +M + D VT+V
Sbjct: 173 DLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVS 232
Query: 354 ILSACTHMGLVRDGFLYFQ--SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
++ C G +RD L Q + + + + + D+ G+ G + A +
Sbjct: 233 VMGLC---GQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQ 289
Query: 412 MEPDAVIWTSLLGA 425
+ V+WTSL+ A
Sbjct: 290 -NRNVVVWTSLMTA 302
>Medtr6g093170.1 | PPR containing protein | HC |
chr6:35177726-35180122 | 20130731
Length = 608
Score = 315 bits (808), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 287/536 (53%), Gaps = 45/536 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
++ +F+ P+ +N + + S + ++ LF ++ P N +T P V+++
Sbjct: 55 YSLSIFNHTLHPSLFLYNLLIKSFFKRNSFQTLISLFNQLRLNGLYPDN-YTYPFVLKAV 113
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ R+G ++H K G + ++ + ++MY+ G + K+F E+ ER+ V W
Sbjct: 114 AFIADFRQGTKIHAFVFKTGLDSDYYVSNSFMDMYAELGRIDFVRKLFDEISERDSVSWN 173
Query: 123 AMISAYISCG------------------------------------DVGSGRRLLDLAPE 146
MIS + C +V G+ + E
Sbjct: 174 VMISGCVKCRRFEEAVEVFQRMRVDSNEKISEATVVSSLTACAASRNVEVGKEIHGFIIE 233
Query: 147 RDV----VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+++ M + ++ Y + G + ARE+FD M ++V W +++ GY + G++ +
Sbjct: 234 KELDFTMRMGNALLDMYCKCGYVSVAREIFDGMIEKNVNCWTSMVTGYVSCGELDKARDL 293
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F++ P R+V W +I GY + RF +A+ F++M V G V P+ F +VA+L C++LG
Sbjct: 294 FDKSPTRDVVLWTAMINGYVQFNRFDEAVALFEEMQVRG-VKPDKFIVVALLTCCAQLGT 352
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L+ G+W+H Y + VG +LI+MYAKCG +E +++VFN L +D SW ++I G
Sbjct: 353 LEHGRWIHDYVRENRIVVDAVVGTSLIEMYAKCGCVEKSLEVFNGLKEKDTASWTSIICG 412
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
LAM+G T +AL LF++MK +PD VTF+ +L+AC+H GLV +G F SM Y I P
Sbjct: 413 LAMNGKTIEALELFEEMKIFGAKPDDVTFIVLLNACSHGGLVEEGHKLFHSMSCIYGIEP 472
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD---AVIWTSLLGACRTHKNVEIAELAF 439
+EHYGC DLLGRAGLL +A ++K+P + + I+ S L ACRT+ N ++ E
Sbjct: 473 NLEHYGCFIDLLGRAGLLHEAEELIKKLPDQKNETIVAIYGSFLSACRTYGNTDMGERIA 532
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
L +++ + + +L++IY RW+D ++ + M+D RK+PGCS IE + S
Sbjct: 533 TALEKVKSSDSSLHSLLASIYASADRWEDASKTRSKMKDLHIRKVPGCSAIEVDGS 588
>Medtr3g105370.3 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48578894 | 20130731
Length = 993
Score = 315 bits (807), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 290/552 (52%), Gaps = 19/552 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR++F +M E + +WN + +G + + + LF ++ R+ P + FT+ V+R
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP-DQFTITSVLR 406
Query: 61 SCSK-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+CS + G QVH A K G +SF+ TALI++YS G + +A +F ++
Sbjct: 407 ACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------YIESGDMVSARE 170
W AM+ + + RL L ER I + ++ G + A
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHA-- 524
Query: 171 LFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ KM + D+ + +L+ Y G++ S KVF ++P + +W +I G NG
Sbjct: 525 VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQ 584
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL + QM + G V P+++T ++ ACS L AL+ GK +H + + FV +L+
Sbjct: 585 ALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG IE A +F ++ R + WN MI GLA HGN +AL+ F++MK+ PD V
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+G+LSAC+H GL D + F SM Y + P+IEHY C+ D L RAG + +A V
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP E A ++ +LL ACR + E E + L ++P + A +V+LSNIY +W++
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+ M+ +K PG S I+ + V F + D H ET+ IY + + ++ GYV
Sbjct: 824 VSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYV 883
Query: 530 PN----LVDVAQ 537
P+ LVD+ +
Sbjct: 884 PDTEFALVDIEE 895
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 230/547 (42%), Gaps = 106/547 (19%)
Query: 4 ARKVFDKMPEPNT--ATWNAMFNGYSLT------ESHRDVVVLFAEMNRAAAAPLNHFTL 55
ARK+FD P+ + T+NA+ Y+ T E + +F + ++ H TL
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH-TL 125
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+ + C G+ E + A K G +W+ F+ AL+ +Y+ + +A +F MP
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 116 RNVVVWTAMISAYISCGD---------------------------VGSGR---------- 138
R+VV+W M+ AY+ G +G G+
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQ 245
Query: 139 ------RLLDLAPERDVVMWSIVISGYIESG----------DMVSARELFDKMPNRDVMS 182
+L + DV +W+ +S Y+++G DM+ +R D + ++S
Sbjct: 246 VRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILS 305
Query: 183 ----------------------W-------NTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
W N+ +N Y +G V ++F +M E ++ S
Sbjct: 306 VVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS 365
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL-GALDMGKWVHVY 272
WN +I G AR+G +L F +L G ++P+ FT+ +VL ACS L + +G+ VH
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSG-LLPDQFTITSVLRACSSLEESYCVGRQVHTC 424
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
A G + FV ALID+Y+K G +E A +F+ D D+ SWN M++G + N +A
Sbjct: 425 ALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREA 484
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA- 391
L LF M E+ D +TF A + ++ G H +I HY
Sbjct: 485 LRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI------HAVVIKMRFHYDLFVI 538
Query: 392 ----DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
D+ + G + A ++P PD V WT+++ C + E A + H + L
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTY-HQMRLAG 596
Query: 448 KNPANFV 454
P +
Sbjct: 597 VQPDEYT 603
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 91/381 (23%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVVWTAMISAY 128
G++ H V G + ++ LI MY+ GS+ A K+F P+ R++V + A+++AY
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 129 ISCGDVGSGR---------RLL----------DLAPERDVVM------------------ 151
G++ RLL L+P + +
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 152 ---WSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG--------- 194
W + ++G Y + + AR LFD+MP RDV+ WN ++ Y G
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 195 --------------------DVGS---FEKVFEEM-----------PERNVYSWNVLIGG 220
VG FE+ E++ + +V WN +
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSS 271
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + G +A++ F+ M ++ V + T + +L + L L++GK +H G+
Sbjct: 272 YLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ V N+ I+MY K G + A +F + D+ISWNT+I+G A G +L LF +
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 341 NSREQPDGVTFVGILSACTHM 361
S PD T +L AC+ +
Sbjct: 391 RSGLLPDQFTITSVLRACSSL 411
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARE----LFDKMPNRDVMSWNTLLNGYANSG 194
R ++P + W ++ I D++ + + N D N L+ YA G
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 195 DVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSD---ALEAFK--QMLVEGDVVPND 247
+ S K+F+ P+ R++ ++N ++ YA G D EAF ++L + ++
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
TL + C G+ + + YA IG + ++FV AL+++YAK I A +F+
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
+ RD++ WN M+ G + L LF S +PD V+ IL
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr3g105370.2 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 290/552 (52%), Gaps = 19/552 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR++F +M E + +WN + +G + + + LF ++ R+ P + FT+ V+R
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP-DQFTITSVLR 406
Query: 61 SCSK-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+CS + G QVH A K G +SF+ TALI++YS G + +A +F ++
Sbjct: 407 ACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------YIESGDMVSARE 170
W AM+ + + RL L ER I + ++ G + A
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHA-- 524
Query: 171 LFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ KM + D+ + +L+ Y G++ S KVF ++P + +W +I G NG
Sbjct: 525 VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQ 584
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL + QM + G V P+++T ++ ACS L AL+ GK +H + + FV +L+
Sbjct: 585 ALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG IE A +F ++ R + WN MI GLA HGN +AL+ F++MK+ PD V
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+G+LSAC+H GL D + F SM Y + P+IEHY C+ D L RAG + +A V
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP E A ++ +LL ACR + E E + L ++P + A +V+LSNIY +W++
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+ M+ +K PG S I+ + V F + D H ET+ IY + + ++ GYV
Sbjct: 824 VSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYV 883
Query: 530 PN----LVDVAQ 537
P+ LVD+ +
Sbjct: 884 PDTEFALVDIEE 895
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 231/547 (42%), Gaps = 106/547 (19%)
Query: 4 ARKVFDKMPEPNT--ATWNAMFNGYSLT------ESHRDVVVLFAEMNRAAAAPLNHFTL 55
ARK+FD P+ + T+NA+ Y+ T E + +F + ++ H TL
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH-TL 125
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+ + C G+ E + A K G +W+ F+ AL+ +Y+ + +A +F MP
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 116 RNVVVWTAMISAYISCGD---------------------------VGSGR---------- 138
R+VV+W M+ AY+ G +G G+
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQ 245
Query: 139 ------RLLDLAPERDVVMWSIVISGYIESG----------DMVSARELFDKMPNRDVMS 182
+L + DV +W+ +S Y+++G DM+ +R D + ++S
Sbjct: 246 VRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILS 305
Query: 183 ----------------------W-------NTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
W N+ +N Y +G V ++F +M E ++ S
Sbjct: 306 VVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS 365
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL-GALDMGKWVHVY 272
WN +I G AR+G +L F +L G ++P+ FT+ +VL ACS L + +G+ VH
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSG-LLPDQFTITSVLRACSSLEESYCVGRQVHTC 424
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
A G + FV ALID+Y+K G +E A +F+ D D+ SWN M++G + N +A
Sbjct: 425 ALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREA 484
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC--- 389
L LF M E+ D +TF A + ++ G H +I HY
Sbjct: 485 LRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI------HAVVIKMRFHYDLFVI 538
Query: 390 --MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+ D+ + G + A ++P PD V WT+++ C + E A + H + L
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTY-HQMRLAG 596
Query: 448 KNPANFV 454
P +
Sbjct: 597 VQPDEYT 603
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 91/381 (23%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVVWTAMISAY 128
G++ H V G + ++ LI MY+ GS+ A K+F P+ R++V + A+++AY
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 129 ISCGDVGSGR---------RLL----------DLAPERDVVM------------------ 151
G++ RLL L+P + +
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 152 ---WSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG--------- 194
W + ++G Y + + AR LFD+MP RDV+ WN ++ Y G
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 195 --------------------DVGS---FEKVFEEM-----------PERNVYSWNVLIGG 220
VG FE+ E++ + +V WN +
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSS 271
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + G +A++ F+ M ++ V + T + +L + L L++GK +H G+
Sbjct: 272 YLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ V N+ I+MY K G + A +F + D+ISWNT+I+G A G +L LF +
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 341 NSREQPDGVTFVGILSACTHM 361
S PD T +L AC+ +
Sbjct: 391 RSGLLPDQFTITSVLRACSSL 411
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARE----LFDKMPNRDVMSWNTLLNGYANSG 194
R ++P + W ++ I D++ + + N D N L+ YA G
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 195 DVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSD---ALEAFK--QMLVEGDVVPND 247
+ S K+F+ P+ R++ ++N ++ YA G D EAF ++L + ++
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
TL + C G+ + + YA IG + ++FV AL+++YAK I A +F+
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
+ RD++ WN M+ G + L LF S +PD V+ IL
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr3g105370.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:48574897-48577818 | 20130731
Length = 973
Score = 315 bits (807), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 183/552 (33%), Positives = 290/552 (52%), Gaps = 19/552 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR++F +M E + +WN + +G + + + LF ++ R+ P + FT+ V+R
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLP-DQFTITSVLR 406
Query: 61 SCSK-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+CS + G QVH A K G +SF+ TALI++YS G + +A +F ++
Sbjct: 407 ACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLA 466
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG---------YIESGDMVSARE 170
W AM+ + + RL L ER I + ++ G + A
Sbjct: 467 SWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHA-- 524
Query: 171 LFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ KM + D+ + +L+ Y G++ S KVF ++P + +W +I G NG
Sbjct: 525 VVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQ 584
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL + QM + G V P+++T ++ ACS L AL+ GK +H + + FV +L+
Sbjct: 585 ALFTYHQMRLAG-VQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG IE A +F ++ R + WN MI GLA HGN +AL+ F++MK+ PD V
Sbjct: 644 DMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRV 703
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+G+LSAC+H GL D + F SM Y + P+IEHY C+ D L RAG + +A V
Sbjct: 704 TFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSS 763
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP E A ++ +LL ACR + E E + L ++P + A +V+LSNIY +W++
Sbjct: 764 MPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENA 823
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
+ M+ +K PG S I+ + V F + D H ET+ IY + + ++ GYV
Sbjct: 824 VSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEGYV 883
Query: 530 PN----LVDVAQ 537
P+ LVD+ +
Sbjct: 884 PDTEFALVDIEE 895
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 138/547 (25%), Positives = 231/547 (42%), Gaps = 106/547 (19%)
Query: 4 ARKVFDKMPEPNT--ATWNAMFNGYSLT------ESHRDVVVLFAEMNRAAAAPLNHFTL 55
ARK+FD P+ + T+NA+ Y+ T E + +F + ++ H TL
Sbjct: 67 ARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRH-TL 125
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+ + C G+ E + A K G +W+ F+ AL+ +Y+ + +A +F MP
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPV 185
Query: 116 RNVVVWTAMISAYISCGD---------------------------VGSGR---------- 138
R+VV+W M+ AY+ G +G G+
Sbjct: 186 RDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQ 245
Query: 139 ------RLLDLAPERDVVMWSIVISGYIESG----------DMVSARELFDKMPNRDVMS 182
+L + DV +W+ +S Y+++G DM+ +R D + ++S
Sbjct: 246 VRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILS 305
Query: 183 ----------------------W-------NTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
W N+ +N Y +G V ++F +M E ++ S
Sbjct: 306 VVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVDLIS 365
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL-GALDMGKWVHVY 272
WN +I G AR+G +L F +L G ++P+ FT+ +VL ACS L + +G+ VH
Sbjct: 366 WNTVISGCARSGLEECSLRLFIDLLRSG-LLPDQFTITSVLRACSSLEESYCVGRQVHTC 424
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
A G + FV ALID+Y+K G +E A +F+ D D+ SWN M++G + N +A
Sbjct: 425 ALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNYREA 484
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC--- 389
L LF M E+ D +TF A + ++ G H +I HY
Sbjct: 485 LRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI------HAVVIKMRFHYDLFVI 538
Query: 390 --MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+ D+ + G + A ++P PD V WT+++ C + E A + H + L
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQALFTY-HQMRLAG 596
Query: 448 KNPANFV 454
P +
Sbjct: 597 VQPDEYT 603
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 157/381 (41%), Gaps = 91/381 (23%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVVWTAMISAY 128
G++ H V G + ++ LI MY+ GS+ A K+F P+ R++V + A+++AY
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 129 ISCGDVGSGR---------RLL----------DLAPERDVVM------------------ 151
G++ RLL L+P + +
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSPSASEALQGYAVKI 151
Query: 152 ---WSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSG--------- 194
W + ++G Y + + AR LFD+MP RDV+ WN ++ Y G
Sbjct: 152 GLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMGAGDEVLGLF 211
Query: 195 --------------------DVGS---FEKVFEEM-----------PERNVYSWNVLIGG 220
VG FE+ E++ + +V WN +
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSS 271
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y + G +A++ F+ M ++ V + T + +L + L L++GK +H G+
Sbjct: 272 YLQAGEGWEAVDCFRDM-IKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQ 330
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+ V N+ I+MY K G + A +F + D+ISWNT+I+G A G +L LF +
Sbjct: 331 FVSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLL 390
Query: 341 NSREQPDGVTFVGILSACTHM 361
S PD T +L AC+ +
Sbjct: 391 RSGLLPDQFTITSVLRACSSL 411
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 11/228 (4%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARE----LFDKMPNRDVMSWNTLLNGYANSG 194
R ++P + W ++ I D++ + + N D N L+ YA G
Sbjct: 3 RKCSVSPSSLLPQWFSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCG 62
Query: 195 DVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSD---ALEAFK--QMLVEGDVVPND 247
+ S K+F+ P+ R++ ++N ++ YA G D EAF ++L + ++
Sbjct: 63 SLFSARKLFDITPQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTR 122
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
TL + C G+ + + YA IG + ++FV AL+++YAK I A +F+
Sbjct: 123 HTLSPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR 182
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
+ RD++ WN M+ G + L LF S +PD V+ IL
Sbjct: 183 MPVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
>Medtr1g007610.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:453448-455881 | 20130731
Length = 668
Score = 314 bits (805), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 175/492 (35%), Positives = 279/492 (56%), Gaps = 18/492 (3%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+++ C+ G +++G+ VH F+ + + +++ MY+ GS+ A +VF EM ++
Sbjct: 97 LLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMCVKD 156
Query: 118 VVVWTAMISAYISCGDVGSGRRLL---------DLAPERDVVMWSIVISGYIESGDMVSA 168
VV WT+MI+ Y G S L L P + + G++ G V
Sbjct: 157 VVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCGFL--GSCVDG 214
Query: 169 REL----FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+++ + +V ++L++ YA G++ VF+E+ +N SWN LI G+AR
Sbjct: 215 KQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNALISGFARK 274
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G +AL F +M EG +FT A+L + S G+L+ GKW+H + G K +V
Sbjct: 275 GEGEEALGLFVKMQREG-FGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYV 333
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
GN L+ MYAK G I A VF+ L + D++S N+M+ G A HG +A+ LF++M E
Sbjct: 334 GNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVE 393
Query: 345 -QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+P+ +TF+ +L+AC+H GL+ +G YF+ ++ Y + P++ HY + DL GRAGLLDQA
Sbjct: 394 IEPNDITFLSVLTACSHAGLLDEGLYYFE-LMKKYGLEPKLSHYTTVVDLFGRAGLLDQA 452
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
SF+ +MP+EP+A IW +LLGA + HKN E+ A Q ++EL+P P +LSNIY
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASA 512
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
G+W+DVA+++ M+D+G +K P CS +E +SV F + D HP+ +Y L +
Sbjct: 513 GQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKI 572
Query: 524 RLHGYVPNLVDV 535
+ GYVP+ V
Sbjct: 573 KEIGYVPDTSHV 584
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 177/342 (51%), Gaps = 21/342 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYS---LTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
AR+VFD+M + TW +M GYS S +VLF EM R P N F L +V+
Sbjct: 145 ARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRP-NEFALSSLVK 203
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C G+ +G+Q+H K GF+ N F+ ++L++MY+ G + ++ VF E+ +N V
Sbjct: 204 CCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVS 263
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERD----------VVMWSIVISGYIESGDMVSARE 170
W A+IS + G+ G L + +R+ ++ S +G +E G + A
Sbjct: 264 WNALISGFARKGE-GEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHM 322
Query: 171 LFDKMPNRDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ + ++ + NTLL+ YA SG++ +KVF+ + + +V S N ++ GYA++G
Sbjct: 323 M---KSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGK 379
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+A+E F++M++ ++ PND T ++VL ACS G LD G + + G + + +
Sbjct: 380 EAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTV 439
Query: 289 IDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNT 329
+D++ + G+++ A + + W ++ MH NT
Sbjct: 440 VDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNT 481
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
++ G + P+ +L C+ LG L GK VH + + ++ ++ + N+++ MYAKCG
Sbjct: 81 LINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCG 140
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHG---NTADALSLFDQMKNSREQPDGVTFVG 353
+E A VF+ + +D+++W +MI G + G + AL LF +M +P+
Sbjct: 141 SLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSS 200
Query: 354 ILSACTHMGLVRDG 367
++ C +G DG
Sbjct: 201 LVKCCGFLGSCVDG 214
>Medtr8g028890.1 | PPR containing plant-like protein | HC |
chr8:11200768-11198782 | 20130731
Length = 655
Score = 312 bits (800), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 290/541 (53%), Gaps = 29/541 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMF------NGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
A+K+F+++P N +WN M N + + R F M P +H T
Sbjct: 114 AKKLFEELPVRNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVP-DHITFNG 172
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ C++ + G Q+HC K GF + F+ AL+ +Y+ G V +A +VF ++ R+
Sbjct: 173 LICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRD 232
Query: 118 VVVWTAMISAYISCGDVGSGRRL-----LDLAPERDVVMWSI--VISG----YIESGDMV 166
+V+W M+S Y+ R+ LD+ + S+ VIS Y + G V
Sbjct: 233 LVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQV 292
Query: 167 SA---RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
+ R+ FD DV+ + L+N YA S ++ +VF+EM RNV +WN +I G+
Sbjct: 293 HSLVLRQSFDS----DVLVASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGN 348
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
+G ++ ++ K+ML EG +P++ T+ +++ +C A+ VH +A + + +
Sbjct: 349 HGDGNEVMKLVKEMLREG-FLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLS 407
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
V N+LI Y+KCG I SA F + D+++W ++I A HG + +F++M +
Sbjct: 408 VANSLISAYSKCGSITSAFKCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYG 467
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+PD + F+G+LSAC H GLV G YF+ M + Y I+P EHY C+ DLLGR GL+++A
Sbjct: 468 IKPDRIAFLGVLSACAHCGLVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEA 527
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+R MP+E D+ + +G+C+ H N+E+A+LA + L +EP+ N+ ++SNI+
Sbjct: 528 FEILRSMPIEVDSDTLGAFIGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQ 587
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
W DV R++ M D K+PGCS IE + + F S D+ HP +Y L MLL
Sbjct: 588 KHWYDVERIRKTMEDKRDAKVPGCSWIEIGNQIHSFVSNDKSHPNALEMYVT---LNMLL 644
Query: 524 R 524
R
Sbjct: 645 R 645
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 107/206 (51%), Gaps = 10/206 (4%)
Query: 158 GYIESGDMVSARELFDKMPNRDVMSW-NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
GY+ G + A + K V+S N +L+ Y + +K+FEE+P RNV SWN+
Sbjct: 74 GYLPEGKQLHAHLI--KFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNI 131
Query: 217 LI-GGYARNGRFSDA-----LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
+I RN + F++ML+E +VP+ T ++ C++ ++MG +H
Sbjct: 132 MIRASVGRNDENESSGMRLCFSYFRRMLLEM-MVPDHITFNGLICLCTQFNDIEMGVQLH 190
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
+ +G+ + FVG AL+ +YAKCG +E+A VF + RD++ WN M++ +
Sbjct: 191 CFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFNSLPE 250
Query: 331 DALSLFDQMKNSREQPDGVTFVGILS 356
+A +F+ M+ D TF +LS
Sbjct: 251 EAFRVFNSMRLDVVNGDEFTFSSLLS 276
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
++ G L GK +H + G+ + + N ++ +Y KC E A +F L R+++SWN
Sbjct: 71 AKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWN 130
Query: 318 TMINGLAMHGNTADA------LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
MI + ++ S F +M PD +TF G++ CT + G
Sbjct: 131 IMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMG 186
>Medtr8g098250.1 | PPR containing plant-like protein | HC |
chr8:40970486-40967324 | 20130731
Length = 998
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 190/539 (35%), Positives = 280/539 (51%), Gaps = 19/539 (3%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
RK+FD+M + N +W + G HRD + LF EM R P + F V+ SC
Sbjct: 297 RKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNP-DAFGCTSVLNSCGS 355
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
A+ +G QVH A K + F+ LI+MY+ S+ DA KVF M ++V + AM
Sbjct: 356 LVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAM 415
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR------ 178
I Y + LDL E + + S + ++ S VSA ++ N+
Sbjct: 416 IEGYSRQDKLCEA---LDLFREMRLSLSSPTLLIFV-SLLGVSASLYHLELSNQIHGLII 471
Query: 179 ------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D + + L++ Y+ VG VFEE+ ++++ W + GY + ++L+
Sbjct: 472 KYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLK 531
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+K L + PN+FT AV+ A S + +L G+ H +G+ + FV N L+DMY
Sbjct: 532 LYK-CLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMY 590
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AK G IE A F + +D WN+MI A HG AL +F+ M +P+ VTFV
Sbjct: 591 AKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFV 650
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+LSAC+H GL+ GF +F SM + I P IEHY CM LLGRAG L +A F+ KMP+
Sbjct: 651 GVLSACSHTGLLDLGFDHFDSM-SQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPI 709
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+ AV+W SLL ACR NVE+ A + I P + ++V+LSNI+ G W +V RL
Sbjct: 710 KQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRRL 769
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ M +G K PGCS IE N+ + +F + D H ++ I L L + ++ GY+ N
Sbjct: 770 REKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIKGFGYMAN 828
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 132/477 (27%), Positives = 218/477 (45%), Gaps = 32/477 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA K+FD M N TW++M + Y+ + ++LF + R+ N + L VVR
Sbjct: 90 VNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVR 149
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ G + Q+H + K G+ + ++CT+LI+ Y+ + DA +F + +
Sbjct: 150 ACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFT 209
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDV---VMWSIVISGYIESGDMVSAREL 171
WT +I+ Y G +L D + P++ V V+ + ++ ++E G + L
Sbjct: 210 WTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVL 269
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ DV N ++ Y V K+F+ M ++NV SW +I G +N DAL
Sbjct: 270 RSGIV-MDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDAL 328
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F +M G P+ F +VL +C L AL+ G+ VH YA + + FV N LIDM
Sbjct: 329 DLFVEMARMG-WNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDM 387
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YAKC + A VFN + D++S+N MI G + +AL LF +M+ S P + F
Sbjct: 388 YAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIF 447
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD--------QA 403
V +L LY + + I I YG D + L+D
Sbjct: 448 VSLLGV--------SASLYHLELSNQ--IHGLIIKYGVSLDEFAGSALIDVYSKCSRVGD 497
Query: 404 VSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
V + + D V+WT++ G + +N E L +++ P F + I
Sbjct: 498 ARLVFEEIQDKDIVVWTAMFSGYTQQSENEE--SLKLYKCLQMSRLKPNEFTFAAVI 552
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 24/260 (9%)
Query: 178 RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
D+ NTLL+ Y+ V K+F+ M +N+ +W+ ++ Y + +AL F Q
Sbjct: 72 HDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQF 131
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ + PN++ L +V+ AC++ G L+ +H GY +++V +LID Y K
Sbjct: 132 MRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHAC 191
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
I+ A +F+ L + +W T+I G + G + +L LFDQMK PD +LSA
Sbjct: 192 IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSA 251
Query: 358 C-----------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
C H ++R G + SMV+ + ++ C LGR L D+ V
Sbjct: 252 CLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDF----YFKCHKVQLGRK-LFDRMV-- 304
Query: 407 VRKMPMEPDAVIWTSLLGAC 426
+ + V WT+++ C
Sbjct: 305 ------DKNVVSWTTVIAGC 318
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 104/236 (44%), Gaps = 41/236 (17%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR VF+++ + + W AMF+GY+ + + + L+ + + P N FT V+
Sbjct: 495 VGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKP-NEFTFAAVIT 553
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S ++R G+Q H K GF + F+ L++MY+ GS+ +A+K F ++
Sbjct: 554 AASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTAC 613
Query: 121 WTAMISAYISCGD-----------------------VG-----SGRRLLDLAPERDVVMW 152
W +MI+ Y G+ VG S LLDL + M
Sbjct: 614 WNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS 673
Query: 153 SIVISGYIE-----------SGDMVSARELFDKMP-NRDVMSWNTLLNGYANSGDV 196
I IE +G + A+E +KMP + + W +LL+ SG+V
Sbjct: 674 QFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNV 729
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+K ++F+ N L+ Y+K ++ A +F+ + +++++W++M++ H + +AL LF
Sbjct: 70 HKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFV 129
Query: 338 Q-MKNSREQPDGVTFVGILSACTHMG 362
Q M++ E+P+ ++ ACT G
Sbjct: 130 QFMRSCNEKPNEYILASVVRACTQFG 155
>Medtr4g108890.1 | PPR containing plant-like protein | HC |
chr4:45133263-45138694 | 20130731
Length = 548
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 184/510 (36%), Positives = 259/510 (50%), Gaps = 48/510 (9%)
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISC- 131
Q+H G + L+ Y+A G + A+K+F ++ VW MI AY S
Sbjct: 34 QIHTQVILNGLSHKHNIIAKLLSFYAASGKLQHAHKLFIQIHNPKTTVWNHMIRAYASSI 93
Query: 132 ----------------------------------GDVGSGRRLLDLAPER----DVVMWS 153
G V G +L + + DV + +
Sbjct: 94 TPWKSVQYYNQMVLNACEPDGFTYSFLLSACVRGGLVREGEQLHGIVLAKGYCSDVFVNT 153
Query: 154 IVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+I+ Y + G + AR +FD M R V+SWN+LL GY GD + VFEE+P RNV S
Sbjct: 154 NLINFYADCGGVEQARYVFDDMTQRSVVSWNSLLVGYVKCGDFDAARNVFEEIPVRNVVS 213
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA 273
W +I GYA+NG+ +AL F QM V + LVAVL AC+ LG L +G+W+H Y
Sbjct: 214 WTTMIAGYAQNGKCVEALSLFGQMR-RARVELDQVVLVAVLSACAELGDLKLGRWIHWYV 272
Query: 274 ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADAL 333
+ + ++ + NAL+ MYA CG+I+ A +F + + +SW +I A G +AL
Sbjct: 273 QERQRQASVRLNNALMHMYASCGIIDEAYRMFTKMSWKTTVSWTIIIMAFAKQGLGKEAL 332
Query: 334 SLF-----DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
LF D + S +PDG TF+ L AC+H G V +G F+SM+ + I QIEHYG
Sbjct: 333 DLFKDMLSDGVGKSGIRPDGTTFIAALCACSHAGFVEEGCRIFESMIHTWRISLQIEHYG 392
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI-ELEP 447
CM DLL RAG LD+A + MP +P+ IW +LLG CR HKN E+A L+ EL+
Sbjct: 393 CMVDLLSRAGCLDEAYRLIETMPFKPNDAIWGALLGGCRIHKNSELASRVANTLVAELDS 452
Query: 448 KNPAN--FVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
+ A V+LSNIY GRWQDV ++ M + G +K PG S I+ V F D
Sbjct: 453 TDQAAGYLVLLSNIYAFAGRWQDVIAVRQKMIEMGVKKPPGQSWIQIYGVVHNFVVGDMT 512
Query: 506 HPETESIYRALRGLTMLLRLHGYVPNLVDV 535
H + IY L +T R+ GY P++ +V
Sbjct: 513 HKHSSLIYETLCEITEQARVEGYKPDITEV 542
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 178/379 (46%), Gaps = 56/379 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA K+F ++ P T WN M Y+ + + V + +M A P + FT ++
Sbjct: 64 LQHAHKLFIQIHNPKTTVWNHMIRAYASSITPWKSVQYYNQMVLNACEP-DGFTYSFLLS 122
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C + G VREGEQ+H + +G+ + F+ T LI Y+ G V A VF +M +R+VV
Sbjct: 123 ACVRGGLVREGEQLHGIVLAKGYCSDVFVNTNLINFYADCGGVEQARYVFDDMTQRSVVS 182
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W +++ Y+ CGD + R + + P R+VV W+ +I+GY ++G V A LF +M V
Sbjct: 183 WNSLLVGYVKCGDFDAARNVFEEIPVRNVVSWTTMIAGYAQNGKCVEALSLFGQMRRARV 242
Query: 181 -------------------------MSW--------------NTLLNGYANSGDVGSFEK 201
+ W N L++ YA+ G + +
Sbjct: 243 ELDQVVLVAVLSACAELGDLKLGRWIHWYVQERQRQASVRLNNALMHMYASCGIIDEAYR 302
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG----DVVPNDFTLVAVLLAC 257
+F +M + SW ++I +A+ G +AL+ FK ML +G + P+ T +A L AC
Sbjct: 303 MFTKMSWKTTVSWTIIIMAFAKQGLGKEALDLFKDMLSDGVGKSGIRPDGTTFIAALCAC 362
Query: 258 SRLGALDMG-----KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR- 311
S G ++ G +H + S+ + ++D+ ++ G ++ A + + +
Sbjct: 363 SHAGFVEEGCRIFESMIHTWRISLQIEHY----GCMVDLLSRAGCLDEAYRLIETMPFKP 418
Query: 312 -DIISWNTMINGLAMHGNT 329
D I W ++ G +H N+
Sbjct: 419 NDAI-WGALLGGCRIHKNS 436
>Medtr4g087150.1 | PPR containing plant-like protein | HC |
chr4:34147385-34144072 | 20130731
Length = 724
Score = 312 bits (799), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 289/526 (54%), Gaps = 10/526 (1%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVV 59
+G A ++F+KMP + W + +GY+ E + + LF M R++ N FTL V+
Sbjct: 185 IGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVL 244
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM-PERNV 118
R C++ + G+ VH + K GF +++ + +AL E Y +V DA +V+ M E
Sbjct: 245 RVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYESMVGEACS 304
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V ++I +S G V + ++ ++ +++I GY SG +++LF+KM +
Sbjct: 305 NVADSLIGGLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLK 364
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAF--- 234
+ S NT++ Y+ +G++ K+F++ ERN +WN ++ GY NG S+AL+ +
Sbjct: 365 HLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTM 424
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
++ LVE + T + AC+ L + G+ +H + Y+ N++VG AL+D Y+K
Sbjct: 425 RRFLVE----YSRSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSK 480
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG + A F + ++ +W +ING A HG ++A+S F M + P+ TFV +
Sbjct: 481 CGHLADAQRSFTSIFSPNVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAV 540
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H GLV +G +F SM +Y I P IEHY C+ DLLGR+G + +A F+ +MP++
Sbjct: 541 LSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKA 600
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D VIW +LL A NVE+ E A L L+P + + V LSN+Y GRW +++
Sbjct: 601 DGVIWGALLNASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRK 660
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLT 520
++ RK G S IE N++V F D HP ++ IY+ + +T
Sbjct: 661 RLQSLELRKDQGFSWIELNNNVHLFSVEDTTHPYSDVIYKTVEHIT 706
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 205/473 (43%), Gaps = 63/473 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+MP ++WN M +GYS + + + L + M+ ++ N + + +C+
Sbjct: 56 ARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH-SSCVKFNEVSFSACLSACT 114
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G++ G+Q+H + K G++ + +AL+ Y + +A VF E+ + N V+W+
Sbjct: 115 RGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSL 174
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVS-ARELF-------DKM 175
M++ Y+ +G + + P RDVV W+ +ISGY + D A +LF + +
Sbjct: 175 MLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVL 234
Query: 176 PNR---------------------------------DVMSWNTLLNGYANSGDVGSFEKV 202
PN D + L Y S V ++V
Sbjct: 235 PNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRV 294
Query: 203 FEEM-PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+E M E + LIGG GR +A F L + ++ N+ + ++ G
Sbjct: 295 YESMVGEACSNVADSLIGGLVSMGRVKEAGMIFYG-LRDKTLISNNLMIKGYAMS----G 349
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMI 320
K + E + K ++ N +I +Y+K G ++ AV +F+ R+ ++WN+M+
Sbjct: 350 QFKKSKKLF---EKMSLK-HLTSLNTMITVYSKNGELDEAVKLFDKTKGERNCVTWNSMM 405
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+G +G ++AL L+ M+ + TF + AC ++ + G Q + H +
Sbjct: 406 SGYIHNGEHSEALKLYVTMRRFLVEYSRSTFSVLFRACAYLCSFQQG----QLLHAHLAK 461
Query: 381 IPQIEHY---GCMADLLGRAG-LLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
P E+ + D + G L D SF P+ WT+L+ H
Sbjct: 462 TPYQENVYVGTALVDFYSKCGHLADAQRSFTS--IFSPNVAAWTALINGYAYH 512
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 60/376 (15%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI-----------------SC----- 131
I ++ G + +A +F EMP R V W MIS Y SC
Sbjct: 44 IAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNE 103
Query: 132 -------------GDVGSGRRLLDL----APERDVVMWSIVISGYIESGDMVSARELFDK 174
G + G+++ L +R + S ++ Y++ + A +F++
Sbjct: 104 VSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEE 163
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA-RNGRFSDALEA 233
+ + + + W+ +L GY +G ++FE+MP R+V +W LI GYA R AL+
Sbjct: 164 LRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDL 223
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F M +V+PN+FTL VL C+RL L +GK VH G+ + V +AL + Y
Sbjct: 224 FGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYC 283
Query: 294 KCGVIESAVDVFN------CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
++ A V+ C + D ++I GL G +A +F +++ +
Sbjct: 284 VSDAVDDAKRVYESMVGEACSNVAD-----SLIGGLVSMGRVKEAGMIFYGLRDKTLISN 338
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+ G + G + F+ M + + M + + G LD+AV
Sbjct: 339 NLMIKGYAMS----GQFKKSKKLFEKMS-----LKHLTSLNTMITVYSKNGELDEAVKLF 389
Query: 408 RKMPMEPDAVIWTSLL 423
K E + V W S++
Sbjct: 390 DKTKGERNCVTWNSMM 405
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 57/307 (18%)
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
V+S N + +A +G + +F+EMP R V SWN +I GY++ G++++AL +
Sbjct: 37 VISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEAL-TLVSFMH 95
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK-CGVI 298
V N+ + A L AC+R G+L +GK +H GY+ VG+AL+ Y + CG+
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 299 ES------------------------------AVDVFNCLDRRDIISWNTMINGLAMHGN 328
E+ A+++F + RD+++W T+I+G A +
Sbjct: 156 EAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKRED 215
Query: 329 TAD-ALSLFDQMKNSRE-QPDGVTFVGILSACTHMGL-----------VRDGFLYFQSMV 375
+ AL LF M+ S E P+ T +L C + + ++DGF +
Sbjct: 216 GCERALDLFGCMRRSSEVLPNEFTLDCVLRVCARLRILYVGKVVHGLCIKDGFDFDN--- 272
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
S+ + + C++D +D A M E + + SL+G + V+ A
Sbjct: 273 ---SVSSALAEFYCVSD------AVDDAKRVYESMVGEACSNVADSLIGGLVSMGRVKEA 323
Query: 436 ELAFQHL 442
+ F L
Sbjct: 324 GMIFYGL 330
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 31/176 (17%)
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
Y ++ N I +AK G + A +F+ + R + SWNTMI+G + G +AL+L
Sbjct: 33 YPPHVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVS 92
Query: 338 QMKNSREQPDGVTFVGILSACT-----------HMGLVRDGFLYF---QSMVDHYSI--- 380
M +S + + V+F LSACT H L + G+ F S + HY +
Sbjct: 93 FMHSSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCC 152
Query: 381 -IPQIEH------------YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
I + E + M + ++ A+ KMP+ D V WT+L+
Sbjct: 153 GIREAEMVFEELRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPVR-DVVAWTTLI 207
>Medtr4g011570.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:2848688-2851472 | 20130731
Length = 873
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 182/517 (35%), Positives = 278/517 (53%), Gaps = 12/517 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFDKMP+ + +WNAM G + + LF M P + T+ V+ +C
Sbjct: 254 ARLVFDKMPKKDRISWNAMIAGCFENGECLEGLTLFCRMIEYPVDP-DLMTMTSVITACE 312
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
G R G ++H + F + + +LI+MYS+ G V +A KVF + R+VV+WTA
Sbjct: 313 LIGDERLGREIHGYVMRTKFSRDPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTA 372
Query: 124 MISAY----ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
MIS Y + + + + + D + +V+S D+ + L +K
Sbjct: 373 MISGYENNLMHQKALETYKMMEAEGIIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTG 432
Query: 180 VMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
++ + N L++ YA + +VF + ++N+ SW +I G N R DAL FK
Sbjct: 433 LIFYVIVANKLIDMYAKCKCIDKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFK 492
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M+ PN TLV VL AC+R+GA GK +H YA G + ++ NA++DMY +C
Sbjct: 493 EMMRRQK--PNWVTLVCVLSACARIGAFTCGKEIHAYALRTGVSDDGYMPNAVLDMYVRC 550
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G +E A F +D+ D+ +WN ++ G A G A LF +M S P+ VTF+ IL
Sbjct: 551 GRMEYAWKQFFSIDQ-DVSTWNILLTGYAERGKGTLATELFRRMLESNVVPNEVTFISIL 609
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+ G+V +G Y+ SM YSI P ++HY C+ DLLGRAG L+ A F++K+PM+PD
Sbjct: 610 CACSRSGMVAEGLEYYDSMKYKYSIKPNLKHYACVVDLLGRAGKLEDAYEFIQKIPMKPD 669
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W +LL ACR H+ VE+ ELA +++ + + +++LSN+Y D W VA ++
Sbjct: 670 PAVWGALLNACRIHRRVELGELAAKNIFHDDTTSVGYYILLSNLYADNNIWDKVAEVRKM 729
Query: 476 MRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
MR G PGCS +E +V F S D HP+ + I
Sbjct: 730 MRQNGIIVDPGCSWVENKGTVHAFLSGDNFHPQIKEI 766
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 225/450 (50%), Gaps = 22/450 (4%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF +MPE N +WN + GY+ + + L+ M P + +T P V+R+C
Sbjct: 156 VFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRP-DVYTFPCVLRTCGGVP 214
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ +G ++H + GF+ + + ALI MY+ G + A VF +MP+++ + W AMI+
Sbjct: 215 DLVKGREIHVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIA 274
Query: 127 AYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NR 178
G+ G R+++ + D++ + VI+ GD RE+ + +R
Sbjct: 275 GCFENGECLEGLTLFCRMIEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSR 334
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D +N+L+ Y++ G V EKVF + R+V W +I GY N ALE +K M
Sbjct: 335 DPSVYNSLIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMME 394
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
EG ++P++ T+ VL ACS L LD G +H A+ G + V N LIDMYAKC I
Sbjct: 395 AEG-IIPDEITIGVVLSACSCLCDLDTGMNLHEKAKKTGLIFYVIVANKLIDMYAKCKCI 453
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ A++VF+ + ++IISW ++I GL ++ DAL F +M R++P+ VT V +LSAC
Sbjct: 454 DKALEVFHSIRDKNIISWTSIILGLRINNRCYDALFFFKEMMR-RQKPNWVTLVCVLSAC 512
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA----DLLGRAGLLDQAVSFVRKMPMEP 414
+G G + Y++ + G M D+ R G ++ A + + ++
Sbjct: 513 ARIGAFTCG-----KEIHAYALRTGVSDDGYMPNAVLDMYVRCGRMEYA--WKQFFSIDQ 565
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
D W LL +A F+ ++E
Sbjct: 566 DVSTWNILLTGYAERGKGTLATELFRRMLE 595
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 186/407 (45%), Gaps = 13/407 (3%)
Query: 58 VVRSCSKAGAVREGEQV--HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+VR C A +EG +V + +K + L L+ M+ G++ DA+ VFG MPE
Sbjct: 103 LVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGNVLLSMFVKFGNLVDAWYVFGRMPE 162
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSAREL 171
RN+ W ++ Y G L D + DV + V+ D+V RE+
Sbjct: 163 RNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRPDVYTFPCVLRTCGGVPDLVKGREI 222
Query: 172 FDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ DV N L+ YA GD+ + VF++MP+++ SWN +I G NG
Sbjct: 223 HVHVLRFGFESDVDVINALITMYAKCGDIDTARLVFDKMPKKDRISWNAMIAGCFENGEC 282
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+ L F +M +E V P+ T+ +V+ AC +G +G+ +H Y + + V N+
Sbjct: 283 LEGLTLFCRM-IEYPVDPDLMTMTSVITACELIGDERLGREIHGYVMRTKFSRDPSVYNS 341
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
LI MY+ G++E A VF+ + RD++ W MI+G + AL + M+ PD
Sbjct: 342 LIQMYSSVGLVEEAEKVFSQTECRDVVMWTAMISGYENNLMHQKALETYKMMEAEGIIPD 401
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+T +LSAC+ + + G + +I + + D+ + +D+A+
Sbjct: 402 EITIGVVLSACSCLCDLDTG-MNLHEKAKKTGLIFYVIVANKLIDMYAKCKCIDKALEVF 460
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
+ + + + WTS++ R + A F+ ++ + N V
Sbjct: 461 HSI-RDKNIISWTSIILGLRINNRCYDALFFFKEMMRRQKPNWVTLV 506
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 107/244 (43%), Gaps = 27/244 (11%)
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK--WVHVYAESIGYKGNMFVGN 286
D+ ++ + + E + + + +A++ C A G W ++ + ++ +GN
Sbjct: 79 DSAMSYLESMHELKISVEEDSYIALVRLCEWKRARKEGSRVWSYITKSKMMTHLSVKLGN 138
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
L+ M+ K G + A VF + R++ SWN ++ G A G +AL+L+D+M +P
Sbjct: 139 VLLSMFVKFGNLVDAWYVFGRMPERNLFSWNVLVGGYAKGGFFDEALNLYDRMLWVGVRP 198
Query: 347 DGVTFVGILSAC-----------THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
D TF +L C H+ ++R G F+S VD +I + +
Sbjct: 199 DVYTFPCVLRTCGGVPDLVKGREIHVHVLRFG---FESDVD---VI------NALITMYA 246
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
+ G +D A KMP + D + W +++ C + F +IE P +P M
Sbjct: 247 KCGDIDTARLVFDKMP-KKDRISWNAMIAGCFENGECLEGLTLFCRMIEY-PVDPDLMTM 304
Query: 456 LSNI 459
S I
Sbjct: 305 TSVI 308
>Medtr2g101710.1 | PPR containing plant protein | HC |
chr2:43758970-43756533 | 20130731
Length = 620
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 282/520 (54%), Gaps = 12/520 (2%)
Query: 22 MFNGYSLTES--HRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAA 79
+FN + ++S H A ++ P H+ +++SC + A+ G+Q+H
Sbjct: 15 IFNLFPFSQSFYHSLATHQTASVDSFPPQPTTHYGYTSLLQSCIDSKALNPGKQLHAQFY 74
Query: 80 KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSG-- 137
G +N L T L+ +Y+ S+ +A +F ++P++N+ +W +I Y G +
Sbjct: 75 HLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAII 134
Query: 138 --RRLLDLAPERDVVMWSIVI---SGYIESGDMVSARELFDKMP-NRDVMSWNTLLNGYA 191
++LD D V+ S G+ S E K RD+ L++ YA
Sbjct: 135 LYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYA 194
Query: 192 NSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLV 251
G V +VF+++ R+ WN ++ YA+NG +++ ++M G V P + TLV
Sbjct: 195 KCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANG-VRPTEATLV 253
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
V+ + + + L G+ +H + G++ N V ALIDMYAKCG ++ A+ +F L +
Sbjct: 254 TVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREK 313
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF 371
++SWN +I G AMHG AL LFD+M+ ++PD +TFVG+L+AC+ L+ +G +
Sbjct: 314 RVVSWNAIITGYAMHGLAVGALDLFDKMRK-EDRPDHITFVGVLAACSRGRLLDEGRALY 372
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
MV Y I P ++HY CM DLLG G LD+A +R M ++PD+ +W +LL +C+ H N
Sbjct: 373 NLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
Query: 432 VEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
VE+AELA + LIELEP + N+V+L+N+Y G+W+ V +L+ M D +K CS IE
Sbjct: 433 VELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKKNIACSWIE 492
Query: 492 CNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ V F + D H +++IY L+ L L+ GY P+
Sbjct: 493 VKNKVYAFLAGDVSHSNSDAIYAELKRLEGLMHEAGYAPD 532
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 163/336 (48%), Gaps = 15/336 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FDK+P+ N WN + GY+ H + ++L+ +M P N FTLP V+++CS
Sbjct: 101 ARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDN-FTLPFVLKACS 159
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ EG +H K G++ + F+ ALI+MY+ G V DA +VF ++ R+ V+W +
Sbjct: 160 ALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNS 219
Query: 124 MISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF-----DK 174
M++AY G + R + VIS + + RE+
Sbjct: 220 MLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHG 279
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ D + L++ YA G V +FE + E+ V SWN +I GYA +G AL+ F
Sbjct: 280 FQSNDKVK-TALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLF 338
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFVGNALIDMYA 293
+M E P+ T V VL ACSR LD G+ ++ + G + +ID+
Sbjct: 339 DKMRKEDR--PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLG 396
Query: 294 KCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
CG ++ A D+ + + D W ++N +HGN
Sbjct: 397 HCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGN 432
>Medtr1g012380.1 | PPR containing plant-like protein | HC |
chr1:2444546-2447496 | 20130731
Length = 600
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/492 (34%), Positives = 272/492 (55%), Gaps = 20/492 (4%)
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDA--------YKVFGEMP 114
S + + Q+H K G + N + T S S+ A + P
Sbjct: 26 SHCNTLSKLTQIHAFILKTGLQNNPLILTKFTSTSSNLNSIHYATSFLFPPSHTTSTPTP 85
Query: 115 ERNVVVWTAMISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVISGYIESGDMVSAR 169
+ ++ +I AY D S R +L + + V+ G G + +
Sbjct: 86 SYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTPNKFTFPFVLKGCAGIGSLRLGK 145
Query: 170 ELFDKMPN----RDVMSWNTLLNGYANSGDVG-SF-EKVFEEMPERNVYSWNVLIGGYAR 223
+ + DV NTL++ Y G+ G F EKVF++ P+ + +W+ +I G+ R
Sbjct: 146 CVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGFVR 205
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G S A++ F++M V G V P++ T+V+VL AC+ LGAL++GKWV Y E ++
Sbjct: 206 LGCSSRAVDLFREMQVMG-VCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVE 264
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+ NALIDM+AKCG ++ A+ +F +D R I+SW ++I GLAMHG DA+SLFD+M +
Sbjct: 265 LCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENG 324
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
PD V F+G+LSAC+H GLV G YF SM ++SI+P++EHYGCM DLL R G + +A
Sbjct: 325 ITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEA 384
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
FV+KMP EP+ +IW +++ AC +++ E + LI+ EP + +N+V+LSNIY L
Sbjct: 385 FEFVQKMPFEPNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKL 444
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
+W+ +++ M G +K+PG ++IE N+ + EF + D+ H + + IY + + +
Sbjct: 445 RQWEKKTKVREMMDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREI 504
Query: 524 RLHGYVPNLVDV 535
+ GYVP V
Sbjct: 505 KKAGYVPTTSQV 516
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 160/333 (48%), Gaps = 23/333 (6%)
Query: 12 PEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVRE 70
P + +N + YS T +S + + + M R P N FT P V++ C+ G++R
Sbjct: 85 PSYDAFLFNTLIRAYSQTRDSKSNSFLFYRTMLRYGVTP-NKFTFPFVLKGCAGIGSLRL 143
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAY--KVFGEMPERNVVVWTAMISAY 128
G+ VH K GF+ + + LI MY G G + KVF + P+ + V W+AMI+ +
Sbjct: 144 GKCVHGCVVKFGFEEDVHVLNTLIHMYCCLGEDGFEFAEKVFDDSPKMDTVTWSAMIAGF 203
Query: 129 ISCG------DVGSGRRLLDLAPERDVVMWSIVIS----GYIESGDMVSARELFDKMPNR 178
+ G D+ +++ + P+ ++ M S++ + G +E G V + +P +
Sbjct: 204 VRLGCSSRAVDLFREMQVMGVCPD-EITMVSVLSACADLGALELGKWVESYVEKKNIP-K 261
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
V N L++ +A G+V K+F +M R + SW +I G A +GR DA+ F +M
Sbjct: 262 SVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEM- 320
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE---SIGYKGNMFVGNALIDMYAKC 295
VE + P+D + VL ACS G +D G++ E SI K + ++D+ +
Sbjct: 321 VENGITPDDVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPKVEHY--GCMVDLLCRG 378
Query: 296 GVIESAVDVFNCLD-RRDIISWNTMINGLAMHG 327
G ++ A + + + I W T+I G
Sbjct: 379 GFVKEAFEFVQKMPFEPNQIIWRTIITACHATG 411
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 142/333 (42%), Gaps = 58/333 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD P+ +T TW+AM G+ V LF EM P + T+ V+ +C+
Sbjct: 181 AEKVFDDSPKMDTVTWSAMIAGFVRLGCSSRAVDLFREMQVMGVCP-DEITMVSVLSACA 239
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ G+ V K+ + LC ALI+M++ G+V A K+F +M R +V WT+
Sbjct: 240 DLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTS 299
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----D 179
VI+G G + A LFD+M D
Sbjct: 300 -------------------------------VIAGLAMHGRGLDAVSLFDEMVENGITPD 328
Query: 180 VMSWNTLLNGYANSGDV-------GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+++ +L+ ++SG V GS E+ F +P+ V + ++ R G +A E
Sbjct: 329 DVAFIGVLSACSHSGLVDKGRYYFGSMERNFSIVPK--VEHYGCMVDLLCRGGFVKEAFE 386
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH---VYAESIGYKGNMFVGNALI 289
++M E PN ++ AC G L +G+ + + +E + + + N
Sbjct: 387 FVQKMPFE----PNQIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSN--- 439
Query: 290 DMYAKCGVIESAVDVFNCLDRRDI--ISWNTMI 320
+YAK E V +D R + + +TMI
Sbjct: 440 -IYAKLRQWEKKTKVREMMDMRGMKKVPGSTMI 471
>Medtr7g078420.1 | PPR containing plant-like protein | HC |
chr7:29654282-29650656 | 20130731
Length = 646
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 274/534 (51%), Gaps = 85/534 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP+ A WN M +GY
Sbjct: 153 ARKLFDEMPDRTVADWNVMISGYW------------------------------------ 176
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K G E + V + N T +I ++ KG++ A F +MPER+VV W A
Sbjct: 177 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 236
Query: 124 MISAYISCGDVGSGRRLLD--LAP---ERDVVMWSIVISG-------------------- 158
M+S Y G RL + L+P + D W VIS
Sbjct: 237 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDT 296
Query: 159 ----------------YIESGDMVSARELFDKM---PNRDVMSWNTLLNGYANSGDVGSF 199
+ + G++ +A ++F+++ R + WN +++ YA GD+ S
Sbjct: 297 VGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSA 356
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
+F++MP+R+ SWN +I GY +NG A++ F++M+ D P++ T+V+V AC
Sbjct: 357 RHLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGH 416
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
LG L +G W + + ++ V N+LI MY++CG ++ AV +F + RD++S+NT+
Sbjct: 417 LGELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVSYNTL 476
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I+G A HG+ +++ L +MK +PD +T++ IL+AC+H GL+ +G F+S+
Sbjct: 477 ISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK---- 532
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
P ++HY CM D+LGRAG L++A+ ++ MPMEP A I+ SLL A HK VE+ ELA
Sbjct: 533 -FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAA 591
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
L ++EP N N+V+LSNIY GRW+D +++ MR G +K G S +E N
Sbjct: 592 AKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLEHN 645
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/464 (28%), Positives = 209/464 (45%), Gaps = 79/464 (17%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDV-VVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+F P+ + M YS V V LF M R N ++++S A
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNTSFYSVMMKS---A 114
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
G+ H + K G+ + ++ ++ +Y+ G + A K+F EMP+R V W MI
Sbjct: 115 GSESMLFLAHVL--KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 126 SAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
S Y CG+ L D R+V+ W+ +I+G+ + G++ +AR FDKMP R V+
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVV 232
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
SWN +L+GYA G PE + + F ML G
Sbjct: 233 SWNAMLSGYAQGG-----------APE--------------------ETIRLFNDMLSPG 261
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIE- 299
+V P++ T V V+ +CS LG + + V +++G++ N FV AL+DM+AKCG +E
Sbjct: 262 NVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEA 321
Query: 300 ---------------------------------SAVDVFNCLDRRDIISWNTMINGLAMH 326
SA +F+ + +RD +SWN+MI G +
Sbjct: 322 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVSWNSMIAGYTQN 381
Query: 327 GNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
G + A+ LF++M +S + +PD VT V + SAC H+G + G + S++ I I
Sbjct: 382 GESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGLGN-WAVSILKENHIQISIS 440
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
Y + + R G + AV ++M D V + +L+ H
Sbjct: 441 VYNSLISMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEH 483
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 133/317 (41%), Gaps = 74/317 (23%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+RD N +L YA G + K+F+EMP+R V WNV+I GY + G +A F
Sbjct: 131 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHV 190
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M GD SR N+ +I +AK G
Sbjct: 191 M---GDQ------------EISR---------------------NVITWTTMITGHAKKG 214
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF-DQMKNSREQPDGVTFVGIL 355
+++A F+ + R ++SWN M++G A G + + LF D + QPD T+V ++
Sbjct: 215 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVI 274
Query: 356 SACTHMG-------LVRD-----GFL--YF--QSMVDHYS----------IIPQIEHY-- 387
S+C+ +G +VR GF YF +++D ++ I Q+ Y
Sbjct: 275 SSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 334
Query: 388 ------GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQ 440
M R G L A KMP + D V W S++ G + ++V+ +L F+
Sbjct: 335 RSSVPWNAMISAYARVGDLPSARHLFDKMP-QRDTVSWNSMIAGYTQNGESVKAIKL-FE 392
Query: 441 HLIELEPKNPANFVMLS 457
+I E P M+S
Sbjct: 393 EMISSEDSKPDEVTMVS 409
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 114/258 (44%), Gaps = 15/258 (5%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNG-RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+F +V + ++ Y++ G R + FK ML ++ PN + +V++ +
Sbjct: 58 IFHAATHPDVRVFTFMLKYYSQIGVRAQVPVSLFKHMLRHCNIKPNT-SFYSVMMKSA-- 114
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
G+ M HV GY + +V N ++ +YAK G IE A +F+ + R + WN MI
Sbjct: 115 GSESMLFLAHVLKS--GYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 172
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+G GN +A +LF M + + +T+ +++ G ++ +YF M +
Sbjct: 173 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPER--- 229
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKM----PMEPDAVIWTSLLGACRTHKNVEIAE 436
+ + M + G ++ + M ++PD W +++ +C + + ++E
Sbjct: 230 --SVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSE 287
Query: 437 LAFQHLIELEPKNPANFV 454
+ L + P FV
Sbjct: 288 SIVRKLDDTVGFRPNYFV 305
>Medtr1g038860.1 | PPR containing plant-like protein | LC |
chr1:14313044-14316621 | 20130731
Length = 625
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 301/556 (54%), Gaps = 41/556 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGY-------------SLTESHRDVVVLFA------E 41
+ ARKVFD+M + ++ W M +GY ++ + V+V A +
Sbjct: 61 VNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIK 120
Query: 42 MNRAAAAPLNHFTLPI--------VVRSCSKAGAVREGEQVHCVAAKRGF-KWNSFLCTA 92
MNR A +P+ ++ ++ G +E + +R WN+ + TA
Sbjct: 121 MNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVM-TA 179
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMW 152
L G + DA ++F EM ER+VV WT M++ G V + R + D P R+VV W
Sbjct: 180 LAHC----GRIDDAERLFNEMRERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVSW 235
Query: 153 SIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY 212
+ +I+GY ++G A +LF++MP RD+ SWNT++ G+ +GD+ E++F MP++NV
Sbjct: 236 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVI 295
Query: 213 SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
+W ++ GY ++G +AL+ F +M + P T V VL ACS L L G+ +H
Sbjct: 296 TWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM 355
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN--CLDRRDIISWNTMINGLAMHGNTA 330
++ + +V +ALI+MY+KCG A +F+ D+I+WN MI A HG
Sbjct: 356 ISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGN 415
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+A++LF++M+ Q + VT+VG+L+AC+H GL +GF YF ++ + I + +HY C+
Sbjct: 416 EAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCL 475
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
DL GRAG LD+A++ + + E +W +LL C H N +I +L ++++EP+N
Sbjct: 476 IDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPENA 535
Query: 451 ANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETE 510
+++ SN+Y +G ++ A +++ M+ G +K PGCS I+ ++V F D+ H + E
Sbjct: 536 DTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQFE 595
Query: 511 SIYRALRGLTMLLRLH 526
+ +LL LH
Sbjct: 596 MLK------YLLLDLH 605
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 163/311 (52%), Gaps = 18/311 (5%)
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLA-PERD 148
C I +G V +A KVF EM +R+ +WT MIS YI CG + R+L D ++
Sbjct: 48 CNYFISKLCREGKVNEARKVFDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKS 107
Query: 149 VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
V++W+ ++SGYI+ + A LF++MP R+V+SWNT+++GYA +G +F MPE
Sbjct: 108 VIVWTAMVSGYIKMNRIEEAERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPE 167
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
RNV SWN ++ A GR DA F +M E DVV T+VA L S+ G +D +
Sbjct: 168 RNVVSWNTVMTALAHCGRIDDAERLFNEMR-ERDVVSWT-TMVAGL---SKNGRVDAARE 222
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
V + + + N+ NA+I YA+ G + A+ +F + RD+ SWNTM+ G +G+
Sbjct: 223 VF---DKMPIR-NVVSWNAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGD 278
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY- 387
A LF M Q + +T+ +++ GL + F M + + P +
Sbjct: 279 LNRAEQLFHAMP----QKNVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFV 334
Query: 388 ---GCMADLLG 395
G +DL G
Sbjct: 335 TVLGACSDLAG 345
>Medtr4g015760.4 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 703
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 280/545 (51%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KVF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 158 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 217
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 218 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 277
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M++ Y D G+ +LDL E R W V+S +E G +
Sbjct: 278 WSTMVACY---ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 334
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y +F MP+++V +W VL GYA NG
Sbjct: 335 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVH 393
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L +H + G++ N F+G +L
Sbjct: 394 ESMWVFRNMLSSG-TRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 452
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL LF QM N S +P+
Sbjct: 453 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPN 512
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 513 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVI 572
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+P + +++LSNIY W
Sbjct: 573 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 632
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 633 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVA 692
Query: 528 YVPNL 532
+ P +
Sbjct: 693 FDPQV 697
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 237/484 (48%), Gaps = 48/484 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +MN ++ + +++++ I
Sbjct: 54 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIA 113
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA KVF E P+ +V
Sbjct: 114 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 173
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD---MVSARELFDKM 175
V+WT++IS Y G +PE + +S ++ S D +VS ++
Sbjct: 174 VLWTSIISGYEQSG-----------SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 176 PN----RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
N R V + N+LL+ Y +G + + +F EM ++++ SW+ ++
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
YA NG +D L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G+
Sbjct: 283 ACYADNGAETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 341
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V AL+DMY KC E AVD+FN + ++D+I+W + +G A +G +++ +F
Sbjct: 342 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 401
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ-IEHY----GCMADL 393
M +S +PD + V IL+ + +G+++ Q++ H +I E+ + ++
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQ------QAVCLHAFVIKNGFENNQFIGASLIEV 455
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
+ ++ A + M + D V W+S++ A H E A F + P N
Sbjct: 456 YAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNV 514
Query: 454 VMLS 457
+S
Sbjct: 515 TFIS 518
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 36/453 (7%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CSK Q+H K G +SF+ T L +Y+ S+ A+K+F E P R V +W
Sbjct: 15 CSKLSI----SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLW 70
Query: 122 TAMISAYISCGDVGSGRRLL-------DLAPERDVVMWSIVIS------------GYIES 162
A++ +Y G+ L ++ E +S+ I+ G +
Sbjct: 71 NALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIH 130
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
G + R + D+ + L++ Y G + KVF E P+ +V W +I GY
Sbjct: 131 GFLKKVR------IDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 184
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
++G AL F +M+V V P+ TLV+V AC++L +G+ VH + + G +
Sbjct: 185 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL 244
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ N+L+ +Y K G I++A ++F + +DIISW+TM+ A +G D L LF++M +
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK 304
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
R +P+ VT V +L AC + + +G + + +Y + + D+ + ++
Sbjct: 305 RIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 363
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIY 460
AV +MP + D + W L + V + F++++ P A +L+ I
Sbjct: 364 AVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTI- 421
Query: 461 KDLGRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
+LG Q L + GF + G S+IE
Sbjct: 422 SELGILQQAVCLHAFVIKNGFENNQFIGASLIE 454
>Medtr4g015760.1 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 703
Score = 309 bits (792), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 280/545 (51%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KVF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 158 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 217
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 218 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 277
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M++ Y D G+ +LDL E R W V+S +E G +
Sbjct: 278 WSTMVACY---ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 334
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y +F MP+++V +W VL GYA NG
Sbjct: 335 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVH 393
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L +H + G++ N F+G +L
Sbjct: 394 ESMWVFRNMLSSG-TRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 452
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL LF QM N S +P+
Sbjct: 453 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPN 512
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 513 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVI 572
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+P + +++LSNIY W
Sbjct: 573 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 632
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 633 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVA 692
Query: 528 YVPNL 532
+ P +
Sbjct: 693 FDPQV 697
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 237/484 (48%), Gaps = 48/484 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +MN ++ + +++++ I
Sbjct: 54 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIA 113
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA KVF E P+ +V
Sbjct: 114 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 173
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD---MVSARELFDKM 175
V+WT++IS Y G +PE + +S ++ S D +VS ++
Sbjct: 174 VLWTSIISGYEQSG-----------SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 222
Query: 176 PN----RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
N R V + N+LL+ Y +G + + +F EM ++++ SW+ ++
Sbjct: 223 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 282
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
YA NG +D L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G+
Sbjct: 283 ACYADNGAETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 341
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V AL+DMY KC E AVD+FN + ++D+I+W + +G A +G +++ +F
Sbjct: 342 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 401
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ-IEHY----GCMADL 393
M +S +PD + V IL+ + +G+++ Q++ H +I E+ + ++
Sbjct: 402 MLSSGTRPDAIALVKILTTISELGILQ------QAVCLHAFVIKNGFENNQFIGASLIEV 455
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
+ ++ A + M + D V W+S++ A H E A F + P N
Sbjct: 456 YAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNV 514
Query: 454 VMLS 457
+S
Sbjct: 515 TFIS 518
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 36/453 (7%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CSK Q+H K G +SF+ T L +Y+ S+ A+K+F E P R V +W
Sbjct: 15 CSKLSI----SQLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLW 70
Query: 122 TAMISAYISCGDVGSGRRLL-------DLAPERDVVMWSIVIS------------GYIES 162
A++ +Y G+ L ++ E +S+ I+ G +
Sbjct: 71 NALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIH 130
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
G + R + D+ + L++ Y G + KVF E P+ +V W +I GY
Sbjct: 131 GFLKKVR------IDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYE 184
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
++G AL F +M+V V P+ TLV+V AC++L +G+ VH + + G +
Sbjct: 185 QSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKL 244
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ N+L+ +Y K G I++A ++F + +DIISW+TM+ A +G D L LF++M +
Sbjct: 245 CLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDK 304
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
R +P+ VT V +L AC + + +G + + +Y + + D+ + ++
Sbjct: 305 RIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEK 363
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIY 460
AV +MP + D + W L + V + F++++ P A +L+ I
Sbjct: 364 AVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTI- 421
Query: 461 KDLGRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
+LG Q L + GF + G S+IE
Sbjct: 422 SELGILQQAVCLHAFVIKNGFENNQFIGASLIE 454
>Medtr4g094645.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38635968-38632937 | 20130731
Length = 694
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 161/498 (32%), Positives = 277/498 (55%), Gaps = 21/498 (4%)
Query: 55 LPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP 114
I+++SC +V G+Q+H + G+ + F+ L+ YS G + +A K+F MP
Sbjct: 81 FSILIQSCIPTNSVSLGKQLHSLIFTSGYSSDKFISNHLLNFYSKFGELNNAVKLFDRMP 140
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
RN + MI AY+ G++ + + L D ER+V W+ +++G ++ G + LF +
Sbjct: 141 RRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFG-LNEEALLFSR 199
Query: 175 M------PNRDVMSWNTLLNGYAN-----SGDVGSF------EKVFEEMPERNVYSWNVL 217
M P D S+ ++L G A+ GD + E++ + MP N+ +WN L
Sbjct: 200 MNVLGFVP--DEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERIIKWMPNCNLVAWNTL 257
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
+ G A+N F L+ + M + G P+ T V+V+ +CS L L GK +H G
Sbjct: 258 MAGKAQNRCFDGVLDHYCMMKMAG-YRPDRITFVSVISSCSELATLCQGKQIHAEVIKAG 316
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+ V ++L+ MY+KCG ++ ++ F + RD++ W++MI HG A+ LF+
Sbjct: 317 ASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFN 376
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+ + VTF+ +L AC+H GL G +F MV+ Y + ++EHY C+ DLLGR+
Sbjct: 377 DKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRS 436
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
G L++A + +R MP+ DA+IW +LL AC+ HKN E+A + ++ ++P++PA++V+++
Sbjct: 437 GCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAEEVLRIDPQDPASYVLIA 496
Query: 458 NIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALR 517
I+ RWQ+V+ ++ AM+D +K PG S +E + V +F+ DE H + I + L
Sbjct: 497 GIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQVHQFHMGDESHSKFVEINQYLE 556
Query: 518 GLTMLLRLHGYVPNLVDV 535
LT +++ GYVP++ V
Sbjct: 557 ELTSEMKMQGYVPDISSV 574
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 151/375 (40%), Gaps = 80/375 (21%)
Query: 1 MGHARKVFDKMP-------------------------------EPNTATWNAMFNG---Y 26
+ +A K+FD+MP E N ATWNAM G +
Sbjct: 129 LNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKF 188
Query: 27 SLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV---AAKRGF 83
L E +LF+ MN P + ++ V+R C+ A+ G++ + +R
Sbjct: 189 GLNEE----ALLFSRMNVLGFVP-DEYSFGSVLRGCAHLRALSVGDRFTLMLRNVGERII 243
Query: 84 KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS--AYISCGD-VGSGRRL 140
KW MP N+V W +++ A C D V +
Sbjct: 244 KW---------------------------MPNCNLVAWNTLMAGKAQNRCFDGVLDHYCM 276
Query: 141 LDLAPER-DVVMWSIVISGYIESGDMVSARELFDKM----PNRDVMSWNTLLNGYANSGD 195
+ +A R D + + VIS E + +++ ++ + V ++L++ Y+ G
Sbjct: 277 MKMAGYRPDRITFVSVISSCSELATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGS 336
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ K F E ER+V W+ +I Y +G+ A++ F E ++ N+ T +++L
Sbjct: 337 LQDSIKAFLECEERDVVLWSSMIAAYGFHGQCEKAIKLFNDKEKE-NMAGNEVTFLSLLY 395
Query: 256 ACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDI 313
ACS G D G + + E G K + ++D+ + G +E A + + D
Sbjct: 396 ACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADA 455
Query: 314 ISWNTMINGLAMHGN 328
I W T+++ +H N
Sbjct: 456 IIWKTLLSACKIHKN 470
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
++ MP N WN + G + V+ + M A P + T V+ SCS+
Sbjct: 241 RIIKWMPNCNLVAWNTLMAGKAQNRCFDGVLDHYCMMKMAGYRP-DRITFVSVISSCSEL 299
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+ +G+Q+H K G + ++L+ MYS GS+ D+ K F E ER+VV+W++MI
Sbjct: 300 ATLCQGKQIHAEVIKAGASSVVTVISSLVSMYSKCGSLQDSIKAFLECEERDVVLWSSMI 359
Query: 126 SAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKMPNR--- 178
+AY G +L + + ++ V + ++ SG + FD M +
Sbjct: 360 AAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGL 419
Query: 179 --DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ + +++ SG + E + MP + W L+ + A +
Sbjct: 420 KARLEHYTCVVDLLGRSGCLEEAETIIRSMPVSADAIIWKTLLSACKIHKNEEMARRVAE 479
Query: 236 QMLVEGDVVPNDFTLVAVLLACSR 259
++L P + L+A + A ++
Sbjct: 480 EVLRIDPQDPASYVLIAGIHASAK 503
>Medtr7g100810.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:40624011-40626927 | 20130731
Length = 793
Score = 309 bits (791), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 281/537 (52%), Gaps = 10/537 (1%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA VF ++P + +W M GY + + LF ++ R N F V +C
Sbjct: 219 HASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSAC 278
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S + G+QVH + K G + N F +L +MY+ G + A F ++ ++V W
Sbjct: 279 SSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWN 338
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP-- 176
A+I+A+ GD R+++ + D + + ++ + R++ +
Sbjct: 339 AIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKI 398
Query: 177 --NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEA 233
++++ N+LL Y + VF ++ N+ SWN ++ + + +
Sbjct: 399 GFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRL 458
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+K+M G+ P+ T+ +L C+ L +L +G VH Y+ G ++ V N LIDMYA
Sbjct: 459 YKEMHFSGNK-PDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYA 517
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG ++ A DVF+ DI+SW+++I G A G +AL+LF M N QP+ VT++G
Sbjct: 518 KCGSLKHARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLG 577
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
LSAC+H+GLV +G+ ++SM + I P EH+ C+ DLL RAG L +A +F++K ++
Sbjct: 578 ALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLD 637
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
D W +LL AC+TH NV+IAE ++++L+P N A VML NI+ G W++VA+L+
Sbjct: 638 ADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHASAGNWEEVAKLR 697
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
M+ G +K+PG S IE D F+S D HP+ IY L L + GY P
Sbjct: 698 KLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQVLDDGYDP 754
Score = 165 bits (418), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 180/392 (45%), Gaps = 12/392 (3%)
Query: 51 NHF---TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAY 107
+HF T +V +C+ ++ +++H K ++ + L +I MY GS+ DA
Sbjct: 61 SHFEPSTYTSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDAR 120
Query: 108 KVFGEMPERNVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESG 163
KVF M NVV WT+MIS Y G ++ D + + VI +G
Sbjct: 121 KVFDTMQLPNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAG 180
Query: 164 DMVSARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
D+ R+L + + S N L++ Y N G + VF +P +++ SW +I
Sbjct: 181 DIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMIT 240
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
GY + G +AL F+ +L +G PN+F +V ACS L L+ GK VH G +
Sbjct: 241 GYIQLGYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR 300
Query: 280 GNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
N+F G +L DMYAK G + SA F + DI+SWN +I A +G+ +A+ F QM
Sbjct: 301 RNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQM 360
Query: 340 KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGL 399
+ PD +T++ +L C + G S + +I + + +
Sbjct: 361 IHIGLTPDSITYISLLCTCGSPVRLNQG-RQIHSYIVKIGFDKEITVCNSLLTMYTKCSH 419
Query: 400 LDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
L A++ R + + V W ++L AC K
Sbjct: 420 LHDALNVFRDISRNANLVSWNAILSACLQKKQ 451
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 121/264 (45%), Gaps = 40/264 (15%)
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
F + +E+P N I + + +ALEAF L + T +++LAC+
Sbjct: 23 FSNLSKELPT------NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVLACA 76
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+LD K +H + Y+ ++ + N +I+MY KCG ++ A VF+ + +++SW +
Sbjct: 77 NFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTS 136
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDG 367
MI+G + +G DA+ ++ QM S + PD +TF ++ AC H +++
Sbjct: 137 MISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSW 196
Query: 368 FLYF----QSMVDHYSIIPQIEH---------------YGCMADLLGRAGLLDQAV---- 404
F + +++ Y+ QIEH +G M + G +A+
Sbjct: 197 FGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFR 256
Query: 405 SFVRKMPMEPDAVIWTSLLGACRT 428
+R+ +P+ I+ S+ AC +
Sbjct: 257 DLLRQGTYQPNEFIFGSVFSACSS 280
>Medtr4g015760.2 | PPR containing plant-like protein | HC |
chr4:4766254-4759488 | 20130731
Length = 673
Score = 309 bits (791), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 280/545 (51%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KVF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 188 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 247
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M++ Y D G+ +LDL E R W V+S +E G +
Sbjct: 248 WSTMVACY---ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 304
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y +F MP+++V +W VL GYA NG
Sbjct: 305 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVH 363
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L +H + G++ N F+G +L
Sbjct: 364 ESMWVFRNMLSSG-TRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 422
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL LF QM N S +P+
Sbjct: 423 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPN 482
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 483 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVI 542
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+P + +++LSNIY W
Sbjct: 543 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 602
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 603 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVA 662
Query: 528 YVPNL 532
+ P +
Sbjct: 663 FDPQV 667
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 237/484 (48%), Gaps = 48/484 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +MN ++ + +++++ I
Sbjct: 24 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIA 83
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA KVF E P+ +V
Sbjct: 84 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 143
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD---MVSARELFDKM 175
V+WT++IS Y G +PE + +S ++ S D +VS ++
Sbjct: 144 VLWTSIISGYEQSG-----------SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 192
Query: 176 PN----RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
N R V + N+LL+ Y +G + + +F EM ++++ SW+ ++
Sbjct: 193 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 252
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
YA NG +D L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G+
Sbjct: 253 ACYADNGAETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 311
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V AL+DMY KC E AVD+FN + ++D+I+W + +G A +G +++ +F
Sbjct: 312 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 371
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ-IEHY----GCMADL 393
M +S +PD + V IL+ + +G+++ Q++ H +I E+ + ++
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQ------QAVCLHAFVIKNGFENNQFIGASLIEV 425
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
+ ++ A + M + D V W+S++ A H E A F + P N
Sbjct: 426 YAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNV 484
Query: 454 VMLS 457
+S
Sbjct: 485 TFIS 488
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 191/414 (46%), Gaps = 32/414 (7%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL-------DLAPERDVVMWS 153
S+ A+K+F E P R V +W A++ +Y G+ L ++ E +S
Sbjct: 20 ASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYS 79
Query: 154 IVIS------------GYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+ I+ G + G + R + D+ + L++ Y G + K
Sbjct: 80 VSIALKSCAGLRKLLLGKVIHGFLKKVR------IDGDMFVGSALIDLYTKCGQMNDAVK 133
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF E P+ +V W +I GY ++G AL F +M+V V P+ TLV+V AC++L
Sbjct: 134 VFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 193
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+G+ VH + + G + + N+L+ +Y K G I++A ++F + +DIISW+TM+
Sbjct: 194 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 253
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
A +G D L LF++M + R +P+ VT V +L AC + + +G + + +Y
Sbjct: 254 CYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFE 312
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
+ + D+ + ++AV +MP + D + W L + V + F++
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRN 371
Query: 442 LIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
++ P A +L+ I +LG Q L + GF + G S+IE
Sbjct: 372 MLSSGTRPDAIALVKILTTI-SELGILQQAVCLHAFVIKNGFENNQFIGASLIE 424
>Medtr4g015760.3 | PPR containing plant-like protein | HC |
chr4:4765180-4759488 | 20130731
Length = 673
Score = 309 bits (791), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 280/545 (51%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KVF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 128 MNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 187
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 188 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 247
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M++ Y D G+ +LDL E R W V+S +E G +
Sbjct: 248 WSTMVACY---ADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 304
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y +F MP+++V +W VL GYA NG
Sbjct: 305 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVH 363
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L +H + G++ N F+G +L
Sbjct: 364 ESMWVFRNMLSSG-TRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASL 422
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL LF QM N S +P+
Sbjct: 423 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPN 482
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 483 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDVI 542
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+P + +++LSNIY W
Sbjct: 543 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSVDENWH 602
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 603 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAKMREVA 662
Query: 528 YVPNL 532
+ P +
Sbjct: 663 FDPQV 667
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 237/484 (48%), Gaps = 48/484 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +MN ++ + +++++ I
Sbjct: 24 HAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIA 83
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA KVF E P+ +V
Sbjct: 84 LKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDV 143
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD---MVSARELFDKM 175
V+WT++IS Y G +PE + +S ++ S D +VS ++
Sbjct: 144 VLWTSIISGYEQSG-----------SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQL 192
Query: 176 PN----RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
N R V + N+LL+ Y +G + + +F EM ++++ SW+ ++
Sbjct: 193 SNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMV 252
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
YA NG +D L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G+
Sbjct: 253 ACYADNGAETDVLDLFNEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGF 311
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
+ V AL+DMY KC E AVD+FN + ++D+I+W + +G A +G +++ +F
Sbjct: 312 EMETTVSTALMDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRN 371
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQ-IEHY----GCMADL 393
M +S +PD + V IL+ + +G+++ Q++ H +I E+ + ++
Sbjct: 372 MLSSGTRPDAIALVKILTTISELGILQ------QAVCLHAFVIKNGFENNQFIGASLIEV 425
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
+ ++ A + M + D V W+S++ A H E A F + P N
Sbjct: 426 YAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKLFYQMANHSDTKPNNV 484
Query: 454 VMLS 457
+S
Sbjct: 485 TFIS 488
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 191/414 (46%), Gaps = 32/414 (7%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL-------DLAPERDVVMWS 153
S+ A+K+F E P R V +W A++ +Y G+ L ++ E +S
Sbjct: 20 ASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYS 79
Query: 154 IVIS------------GYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+ I+ G + G + R + D+ + L++ Y G + K
Sbjct: 80 VSIALKSCAGLRKLLLGKVIHGFLKKVR------IDGDMFVGSALIDLYTKCGQMNDAVK 133
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF E P+ +V W +I GY ++G AL F +M+V V P+ TLV+V AC++L
Sbjct: 134 VFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLS 193
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+G+ VH + + G + + N+L+ +Y K G I++A ++F + +DIISW+TM+
Sbjct: 194 NFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVA 253
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
A +G D L LF++M + R +P+ VT V +L AC + + +G + + +Y
Sbjct: 254 CYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFE 312
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
+ + D+ + ++AV +MP + D + W L + V + F++
Sbjct: 313 METTVSTALMDMYMKCFSPEKAVDLFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRN 371
Query: 442 LIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
++ P A +L+ I +LG Q L + GF + G S+IE
Sbjct: 372 MLSSGTRPDAIALVKILTTI-SELGILQQAVCLHAFVIKNGFENNQFIGASLIE 424
>Medtr1g039030.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:14398657-14402125 | 20130731
Length = 960
Score = 308 bits (790), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 165/560 (29%), Positives = 286/560 (51%), Gaps = 41/560 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F++MPE + +WN + + +S + +F EM +P N T V+ +C+
Sbjct: 231 ALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSP-NFMTYGSVLSACA 289
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ G +H + + LI+MY+ G + A +VF + E + + W +
Sbjct: 290 STSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNS 349
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVM--------------------------WSI--- 154
+I+ + G L + VV+ ++I
Sbjct: 350 LITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSG 409
Query: 155 ----------VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
+I+ Y + GD A +F MP R+ +SW ++ ++ SGD+G F+
Sbjct: 410 MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFD 469
Query: 205 EMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD 264
MPERN+ +WN ++ Y +NG + L+ + M G V P+ T + AC+ L +
Sbjct: 470 MMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG-VQPDWITFTTSIRACADLAIVK 528
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
+G V +A G N+ V N+++ MY++CG+I+ A + F+ +D +D+ISWN M+ A
Sbjct: 529 LGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFA 588
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+G + F+ M + +P+ +++V +LS C+HMGLV +G YF SM + I P
Sbjct: 589 QNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTN 648
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
EH+ CM DLLGRAGLL+QA + MP +P+A +W++LLG+CR H ++ +AE A + L+E
Sbjct: 649 EHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLME 708
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDE 504
L+ + +V+LSN+Y + G +VA ++ M+ G R GCS IE ++ V F +
Sbjct: 709 LDVEGSEGYVLLSNMYSESGELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDET 768
Query: 505 RHPETESIYRALRGLTMLLR 524
HP+ + +Y L + ++
Sbjct: 769 SHPQIKEVYLKLEEMMKMIE 788
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 197/470 (41%), Gaps = 65/470 (13%)
Query: 63 SKAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--NVV 119
S G + QV R F WN+ +I + + DA K+F EMP R + V
Sbjct: 54 SNCGLTHDAFQVFQETHHRNIFTWNT-----MIRALVSSSRMSDAEKLFDEMPVRVKDSV 108
Query: 120 VWTAMISAYI------------------------------------SCGDVGSGRRLLDL 143
WT MIS Y +CG +G R + L
Sbjct: 109 SWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQL 168
Query: 144 AP-------ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
+ + + V+ Y++ GD+ A +F + + WN+++ GY+
Sbjct: 169 HALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGP 228
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
++F MPER+ SWN LI ++++G L F +M +G PN T +VL A
Sbjct: 229 YKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLAMFVEMCNQG-FSPNFMTYGSVLSA 287
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ L G +H + + ++ GN LIDMYAKCG ++ A VF L D ISW
Sbjct: 288 CASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISW 347
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N++I G+ G DAL LF+QM+ S D IL C+ G ++
Sbjct: 348 NSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTG-----ELLH 402
Query: 377 HYSIIPQIEHYGCMAD----LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
Y+I + + + + + G D+A R MP+ + + WT+++ A ++
Sbjct: 403 GYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLR-NTISWTAMITAFSRSGDI 461
Query: 433 EIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
A F + E +N + + + Y G ++ +L ++MR G +
Sbjct: 462 GKARGYFDMMPE---RNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQ 508
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 123/528 (23%), Positives = 207/528 (39%), Gaps = 109/528 (20%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-------------------NR 44
A +VF + N TWN M + D LF EM N
Sbjct: 62 AFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNG 121
Query: 45 AAAAPLNHFTLPI-----------------VVRSCSKAGAVREGEQVHCVAAKRGFKWNS 87
+ F+L I V+++C G R Q+H + +K GF +
Sbjct: 122 FHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMET 181
Query: 88 FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER 147
+ +++ MY G V A VF ++ ++ W +MI Y ++ + PER
Sbjct: 182 CIQNSVVGMYVKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPER 241
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMPNR----------------------------- 178
D V W+ +IS + + G V +F +M N+
Sbjct: 242 DEVSWNTLISIFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLH 301
Query: 179 ----------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
D++ N L++ YA G + ++VF+ + E + SWN LI G G
Sbjct: 302 ARILRMEHSLDLVFGNGLIDMYAKCGCLDLAKRVFKSLREHDHISWNSLITGVVHFGLGE 361
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
DAL F QM VV ++F L +L CS G+ +H Y G + VGNA+
Sbjct: 362 DALILFNQMR-RSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAI 420
Query: 289 IDMYAKCGVIESAVDV-------------------------------FNCLDRRDIISWN 317
I MYAKCG + A V F+ + R+I++WN
Sbjct: 421 ITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWN 480
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
+M++ +G + + L L+ M+++ QPD +TF + AC + +V+ G + +
Sbjct: 481 SMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLG-MQVVTHATK 539
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+ + + + + R GL+ +A + + + D + W ++L A
Sbjct: 540 FGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSID-DKDLISWNAMLAA 586
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 18/256 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR FD MPE N TWN+M + Y + + L+ M P + T +R
Sbjct: 461 IGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQP-DWITFTTSIR 519
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ V+ G QV A K G N + +++ MYS G + +A F + +++++
Sbjct: 520 ACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGLIKEAKNTFDSIDDKDLIS 579
Query: 121 WTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
W AM++A+ G + + +L + + + + V+SG G + + FD M
Sbjct: 580 WNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLSGCSHMGLVAEGKHYFDSMT 639
Query: 176 ------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFS 228
P + S L G A G + + + E MP + N W+ L+G +
Sbjct: 640 RVFGISPTNEHFSCMVDLLGRA--GLLEQAKDLIEGMPFKPNATVWSALLGSCRVHHDLR 697
Query: 229 DALEAFKQML---VEG 241
A A K+++ VEG
Sbjct: 698 LAETAAKKLMELDVEG 713
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 21/180 (11%)
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY+ CG+ A VF R+I +WNTMI L +DA LFD+M D V+
Sbjct: 52 MYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSRMSDAEKLFDEMP--VRVKDSVS 109
Query: 351 FVGILSACTHMGLVRDGFLYFQSMV----------DHYSIIPQIEHYGCMADLLGRAGLL 400
+ ++S + G F F M+ D +S ++ G LG + L
Sbjct: 110 WTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSFTSVMKACGS----LGDSRLA 165
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
Q + V K+ + I S++G +V++AE F + + P+ F S IY
Sbjct: 166 IQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF-----FDIERPSLFCWNSMIY 220
>Medtr1g073160.1 | PPR containing plant-like protein | HC |
chr1:32444344-32441927 | 20130731
Length = 627
Score = 308 bits (789), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 286/539 (53%), Gaps = 21/539 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
++ VFD + N WN++ NGY + +VLF +M R + +TL + +
Sbjct: 80 SKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMGRCLLP--DDYTLATISKVSG 137
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G+ +H + + GF + + +++ MY GDA KVF EMP+RNV +
Sbjct: 138 EIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNV 197
Query: 124 MISAYISCGDVGSG---------RRLLDLAPERDVVMWSIVISGYIES-GDMVSAREL-- 171
+IS + G++ RR+ D + ++ +S G REL
Sbjct: 198 IISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHC 257
Query: 172 ------FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
D DV ++L++ Y+ S + +VF++M RN+Y W +I GY +NG
Sbjct: 258 YLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNG 317
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
AL F++M + + PN +LV+VL AC L L GK VH ++ + + + +
Sbjct: 318 APEGALILFREMQRKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLR 377
Query: 286 NALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
NALIDMYAKCG ++ A VF N +D I+W+++I+ +HG +AL+ + +M
Sbjct: 378 NALIDMYAKCGSLDYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGI 437
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+PD +T VG+LSAC GLV +G + S+ Y + P +E GC+ DLLGR+G LDQA+
Sbjct: 438 KPDMITVVGVLSACCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQAL 497
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
F+R+MP+ P +W SLL A H N +LA++ L+ELEP+NP+N++ LSN Y
Sbjct: 498 DFIREMPIIPGPSVWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSR 557
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
RW ++ ++ M++ G RK+PG S I +D F D+ HP + SIY L L ++
Sbjct: 558 RWDEITEVRSMMKERGLRKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLDDLVSIM 616
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 185/401 (46%), Gaps = 30/401 (7%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+++ +Q H F N+FL T LI Y+ G + VF + +NV +W ++I+
Sbjct: 41 SLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKNVYLWNSLIN 100
Query: 127 AYISCGDVGSGRRLLD-----LAPERDVVMWSIVISGYIES---GDMVSARELFDKMPNR 178
Y+ + L L P+ + +SG I+ G ++ + L +
Sbjct: 101 GYVKNHQFDNAIVLFRQMGRCLLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVS- 159
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA----- 233
D++ N++++ Y + G KVF+EMP+RNV S+NV+I G A G +L A
Sbjct: 160 DIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSLYADLWNF 219
Query: 234 FKQMLVEGDVVPNDFTLVAVL-LACSRLGALDMGKWVHVYAESIGYKGNM----FVGNAL 288
F++M +G + FT+ ++L + C G D G+ +H Y G M +G++L
Sbjct: 220 FRRMQCQG-YNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSL 278
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPD 347
IDMY++ + + VF+ + R+I W MING +G AL LF +M + R +P+
Sbjct: 279 IDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPN 338
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY----GCMADLLGRAGLLDQA 403
V+ V +L AC + + G V +SI + Y + D+ + G LD A
Sbjct: 339 RVSLVSVLPACGLLVGLMGG-----KQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYA 393
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
DA+ W+S++ A H + A + +++
Sbjct: 394 RRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQ 434
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 40/358 (11%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNG--------YSLTESHRDVVVLFAEMNRAAAAPLNHF 53
G A KVFD+MP+ N ++N + +G YSL + D+ F M + + F
Sbjct: 178 GDAMKVFDEMPQRNVGSFNVIISGCAALGNLDYSL---YADLWNFFRRM-QCQGYNADAF 233
Query: 54 TL-PIVVRSCSKAGAVREGEQVHCVAAKRGFKW----NSFLCTALIEMYSAKGSVGDAYK 108
T+ ++ C G G ++HC K G + + ++LI+MYS + + +
Sbjct: 234 TVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRR 293
Query: 109 VFGEMPERNVVVWTAMISAYISCGDVGSG-------RRLLDLAPERDVVMWSIVISGY-- 159
VF +M RN+ VWTAMI+ Y+ G +R + P R ++ + G
Sbjct: 294 VFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRIRPNRVSLVSVLPACGLLV 353
Query: 160 -IESGDMVSARELFDKMPNRDVMSW-NTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNV 216
+ G V A + KM D +S N L++ YA G + +VF+ ++ +W+
Sbjct: 354 GLMGGKQVHAFSI--KMEFNDYISLRNALIDMYAKCGSLDYARRVFDNGSYSKDAITWSS 411
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAES 275
+I Y +G+ +AL + +ML +G + P+ T+V VL AC R G +D G ++
Sbjct: 412 IISAYGLHGKGQEALTTYYEMLQQG-IKPDMITVVGVLSACCRSGLVDEGISIYNSLTTE 470
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS----WNTMINGLAMHGNT 329
K ++ + ++D+ + G ++ A+D + II W +++ +HGN+
Sbjct: 471 YEMKPSVEICGCVVDLLGRSGQLDQALDF---IREMPIIPGPSVWGSLLTASVIHGNS 525
>Medtr6g075280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:27881892-27885186 | 20130731
Length = 684
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 174/546 (31%), Positives = 280/546 (51%), Gaps = 49/546 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+K+FD M + + W+AM GYS
Sbjct: 17 AQKLFDGMCDRDVIVWSAMIAGYS------------------------------------ 40
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G V ++V C K G + N +I + G +A ++F EM + +
Sbjct: 41 RLGNVDRAKEVFCEMRKEGVEPNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEGFLPDGS 100
Query: 124 MISAYI----SCGDVGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
+S + + DV G+++ + L E D + S ++ Y G +FD++
Sbjct: 101 TVSCVLPGVGNLEDVLMGKQVHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEI 160
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDAL 231
++ S N L G + +G V + VF++ E NV +W +I +NG+ +AL
Sbjct: 161 DQTEIGSLNAFLTGLSRNGLVDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEAL 220
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
E F+ M +G V PN T+ +++ AC + AL GK +H ++ G +++VG+ALIDM
Sbjct: 221 ELFRDMQADG-VEPNAVTIPSLIPACGNISALTHGKEIHCFSLRKGIFDDVYVGSALIDM 279
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YA CG I + + F+ + R+++SWN++++G AMHG + + +F M S ++PD +TF
Sbjct: 280 YANCGRIRLSQNCFDEMPFRNLVSWNSIMSGYAMHGKAKETIEMFHMMLQSGQKPDSITF 339
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+LSACT GL +G+ YF SM Y + P++EHY CM LL R G L++A S +++MP
Sbjct: 340 TSVLSACTQNGLTEEGWHYFNSMSKEYDVKPKMEHYACMVTLLSRVGKLEEAYSIIKEMP 399
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
EPDA +W +LL +CR H N+ + E+A + L LEP NP N+++LSNIY G W + R
Sbjct: 400 FEPDACVWGALLSSCRVHHNLSLGEIAAEKLFVLEPDNPGNYILLSNIYASKGMWDEENR 459
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
++ M+ G +K PGCS IE V S D+ HP+ + I L++ ++ G +P
Sbjct: 460 VRDMMKSKGLQKNPGCSWIEIGHRVHTLVSGDKSHPQMKEILEKSEKLSIEIKESGCLPM 519
Query: 532 LVDVAQ 537
V Q
Sbjct: 520 TKSVLQ 525
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 124/226 (54%), Gaps = 5/226 (2%)
Query: 153 SIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP----E 208
S ++ Y++ + A++LFD M +RDV+ W+ ++ GY+ G+V ++VF EM E
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
N+ SWN +I G+ G + +A+ F +M+ EG +P+ T+ VL L + MGK
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSEG-FLPDGSTVSCVLPGVGNLEDVLMGKQ 120
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
VH Y +G + + +V +AL+DMY +CG VF+ +D+ +I S N + GL+ +G
Sbjct: 121 VHGYVIKLGLESDKYVVSALLDMYGRCGCAPEMSRVFDEIDQTEIGSLNAFLTGLSRNGL 180
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
AL +F + K + + VT+ I+++C G + F+ M
Sbjct: 181 VDTALDVFKKFKAGELELNVVTWTSIIASCVQNGKDMEALELFRDM 226
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
++L+ MY KC I+ A +F+ + RD+I W+ MI G + GN A +F +M+ +
Sbjct: 2 SSLVHMYLKCNRIDDAQKLFDGMCDRDVIVWSAMIAGYSRLGNVDRAKEVFCEMRKEGVE 61
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD---- 401
P+ V++ G+++ ++GL + F MV +P C+ L G L D
Sbjct: 62 PNLVSWNGMIAGFGNVGLYDEAVRLFHEMVSE-GFLPDGSTVSCV--LPGVGNLEDVLMG 118
Query: 402 -QAVSFVRKMPMEPDAVIWTSLL 423
Q +V K+ +E D + ++LL
Sbjct: 119 KQVHGYVIKLGLESDKYVVSALL 141
>Medtr8g105720.1 | PPR containing plant-like protein | HC |
chr8:44583313-44585824 | 20130731
Length = 701
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 290/554 (52%), Gaps = 63/554 (11%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMN--RAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHC 76
W+++ Y+ SH + + F+ N R+ + P N P ++++ + + +H
Sbjct: 78 WSSIIKCYT---SHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHA 134
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
+ G + ++ ALI Y+ + G + VF P+R + I C
Sbjct: 135 CTVRLGLDSDLYIANALINTYAKFHNAGKVFDVF---PKRG--------ESGIDCV---- 179
Query: 137 GRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-------PNR----------- 178
+++ D+ P RDVV W+ VI+G+ ++G V A ++ +M P+
Sbjct: 180 -KKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFA 238
Query: 179 ----------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
DV ++L++ YA + + F +P ++ SWN
Sbjct: 239 EHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNS 298
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
+I G +NG F L F++ML E +V P + +V+ AC+ L AL +G+ +H +
Sbjct: 299 IIAGCVQNGEFDRGLGFFRRMLKE-NVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRL 357
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G+ N F+ ++L+DMYAKCG I+ A VF+ +D+RD+++W +I G AMHG+ DA+SLF
Sbjct: 358 GFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLF 417
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+ M +P V F+ +L+AC+H GLV +G+ YF SM + I P +EHY +ADLLGR
Sbjct: 418 ENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGR 477
Query: 397 AGLLDQAVSFVRKMP-MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
AG L++A F+ M ++P +W+ LL ACR HK+VE+AE L+ ++ +N +V+
Sbjct: 478 AGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVL 537
Query: 456 LSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRA 515
+SNIY RW+D ARL+I MR G +K P CS IE + V F + D+ HP + I +A
Sbjct: 538 MSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKA 597
Query: 516 LRGLTMLLRLHGYV 529
L L + GYV
Sbjct: 598 LDVLLEQMEKEGYV 611
>Medtr3g072900.1 | PPR containing plant-like protein | HC |
chr3:32815251-32818532 | 20130731
Length = 745
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/493 (33%), Positives = 274/493 (55%), Gaps = 16/493 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FDKMPEP+ +WN++ G S R + F M ++ FT P V+++C
Sbjct: 190 AMKLFDKMPEPDIVSWNSIIAGLVDNASSR--ALRFVSMMHGKGLKMDEFTFPSVLKACG 247
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM-----PERNV 118
+ + G ++HC K GF+ + + +ALI+MYS+ + +A K+F + ++
Sbjct: 248 CSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESL 307
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDK 174
+W +M+S ++ GD ++ D +SIV+ + ++ A ++
Sbjct: 308 ALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGF 367
Query: 175 MPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+ D + + L++ YA G + + ++FE +P+++V +W+ LI G AR G A
Sbjct: 368 VITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLA 427
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
F M+ G + + F + VL ACS L + GK VH GY+ V ALID
Sbjct: 428 FSLFMDMIHLGLQI-DHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALID 486
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MYAKCG IE A+ +F CL D +SW ++I G A +G +A+SL +M S +P+ +T
Sbjct: 487 MYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKIT 546
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+G+L+AC H GLV + + F S+ ++ +IP EHY CM D+LG+AG ++AV + +M
Sbjct: 547 ILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEM 606
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P +PD IW+SLLGAC T+KN ++A + +HL+ P++ + ++MLSN+Y LG W V+
Sbjct: 607 PFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWDSVS 666
Query: 471 RLKIAMRDTGFRK 483
+++ ++ G ++
Sbjct: 667 KVRETVKKIGKKR 679
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 131/550 (23%), Positives = 239/550 (43%), Gaps = 85/550 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+MP N +W M + + + + + L+ EM + N F V+++C
Sbjct: 57 ARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACG 116
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V G+ VH + + L AL++MY GS+ DA +VF E+P +N W
Sbjct: 117 LVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNT 176
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF----------- 172
+I Y G + +L D PE D+V W+ +I+G +++ + R +
Sbjct: 177 LILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDE 236
Query: 173 --------------DKMPNRDVMSW-------------NTLLNGYANSGDVGSFEKVFEE 205
+ M R++ + + L++ Y++ + K+F++
Sbjct: 237 FTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQ 296
Query: 206 MPERNVYS-----WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+ S WN ++ G+ NG + +AL M G V + +T VL C
Sbjct: 297 YFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSG-VRFDFYTFSIVLKICMNF 355
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
L + VH + + GY+ + VG+ LID+YAK G I +A+ +F L +D+++W+++I
Sbjct: 356 DNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLI 415
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-----------HMGLVRDGF- 368
G A G+ A SLF M + Q D +L AC+ H ++ G+
Sbjct: 416 TGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYE 475
Query: 369 ---LYFQSMVDHYSIIPQIEH----YGCMADL-----------LGRAGLLDQAVSFVRKM 410
+ +++D Y+ IE +GC++++ + G ++A+S + KM
Sbjct: 476 SEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLHKM 535
Query: 411 ---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKN-----PANFVMLSNIYKD 462
+P+ + +L ACR VE A F +E + P ++ + +I
Sbjct: 536 IESGTKPNKITILGVLTACRHSGLVEEAWDVFN---SIETNHGLIPCPEHYNCMVDILGQ 592
Query: 463 LGRWQDVARL 472
GR+++ +L
Sbjct: 593 AGRFEEAVKL 602
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N +++ Y+ + +F+EMP RN+ SW ++ + +AL + +M+
Sbjct: 42 NNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIE 101
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN F AVL AC + +++GK VH + ++ + NAL+DMY KCG + A
Sbjct: 102 QPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQR 161
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF + ++ SWNT+I G A G DA+ LFD+M +PD V++ I++ GL
Sbjct: 162 VFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP----EPDIVSWNSIIA-----GL 212
Query: 364 VRDG---FLYFQSM-------VDHYSIIPQIEHYGCMADL-LGR 396
V + L F SM +D ++ ++ GC +L LGR
Sbjct: 213 VDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGR 256
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 157/349 (44%), Gaps = 33/349 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A ++F+++P+ + W+++ G + S + LF +M ++HF + IV++
Sbjct: 393 INNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGL-QIDHFVISIVLK 451
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS + + G+QVH + K+G++ + TALI+MY+ G + DA +FG + E + +
Sbjct: 452 ACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMS 511
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMP 176
WT++I G LL E I I G + SG + A ++F+ +
Sbjct: 512 WTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIE 571
Query: 177 NRDVM-----SWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIG--GYARNGRFS 228
+ +N +++ +G K+ EMP + + W+ L+G G +N +
Sbjct: 572 TNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLA 631
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ + + +L P D ++ +L + AL M V E++ G G
Sbjct: 632 NIVA--EHLLATS---PEDVSVYIML--SNVYAALGMWDSVSKVRETVKKIGKKRAGKIF 684
Query: 289 IDM-------------YAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
++ +AK G+ V V + D++SWN +I GLA
Sbjct: 685 YEIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLA 733
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 98/202 (48%), Gaps = 38/202 (18%)
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C R ++ K +H + G+ ++F+ N +I +Y+KC I A ++F+ + R+I+SW
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSR-EQPDGVTFVGILSACTHMGLVRD-------GF 368
TM++ L +ALSL+++M S+ EQP+ + +L AC GLVR+ +
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKAC---GLVRNVELGKMVHY 129
Query: 369 LYFQSMVD-----HYSIIPQIEHYGCMAD-------------------LLGRA--GLLDQ 402
FQ+ +D +++ G + D +LG A GL+D
Sbjct: 130 HIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDD 189
Query: 403 AVSFVRKMPMEPDAVIWTSLLG 424
A+ KMP EPD V W S++
Sbjct: 190 AMKLFDKMP-EPDIVSWNSIIA 210
>Medtr5g008840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1959596-1956593 | 20130731
Length = 831
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 287/574 (50%), Gaps = 88/574 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF+ + EPN T+ M G S T ++ + LF M R ++ +L ++ C+
Sbjct: 192 AFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGIC-VDSVSLSTILVICA 250
Query: 64 KAGAV------------REGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG 111
K + +G+Q+H +A K GF+ + LC +L++MY+ G + A VF
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 112 EMPERNVVVWTAMISAY-----------------------------------ISCGDVGS 136
+ + +VV W MIS Y + GDV
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKV 370
Query: 137 GRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PNR------------ 178
GR++ D ++ W+ ++SGY +S D A ELF KM P+R
Sbjct: 371 GRQIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAE 430
Query: 179 ---------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVL 217
DV ++L+N Y+ G + + VF ++ E +V WN +
Sbjct: 431 LGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVVCWNSM 490
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
I G++ N DAL FK+M G P++F+ + +C++L +L G+ +H G
Sbjct: 491 IAGFSINSLEQDALACFKRMRQFG-FFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDG 549
Query: 278 YKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
Y N+FVG++L++MY KCG + +A F+ + ++I++WN MI+G A +G +A+SL+
Sbjct: 550 YVDNVFVGSSLVEMYCKCGDVGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYK 609
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
M +S E+PD +TFV +L+AC+H LV +G F SM+ + ++P+++HY C+ D LGR
Sbjct: 610 DMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRV 669
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
G ++ + MP + D ++W +L +CR H NV +A+ A + L L P+N A +V+L+
Sbjct: 670 GRFNEVEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLA 729
Query: 458 NIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
N+Y +GRW D ++ M D K PG S E
Sbjct: 730 NMYSSMGRWDDAQVVRDLMSDNQIHKDPGYSRSE 763
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 192/424 (45%), Gaps = 61/424 (14%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+++SC ++ + +H + ++FLC LI++YS + A+ VF ++P +N
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP- 176
+ + A++SA+ ++ RL PER+ V + +I+ +++G A + +D M
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 177 ---------------------------------------NRDVMSWNTLLNGYANSGDVG 197
+ ++ N LL Y G
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+VFE + E N ++ ++GG ++ + + LE F+ ML +G + + +L +L+ C
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKG-ICVDSVSLSTILVIC 249
Query: 258 SR---LGALD---------MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
++ G D GK +H A G++ ++ + N+L+DMYAK G ++SA +VF
Sbjct: 250 AKGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVF 309
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
LD+ ++SWN MI+G ++ AL F +M+ +PD VT++ +L+AC G V+
Sbjct: 310 ENLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVK 369
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME---PDAVIWTSL 422
G F M P + + + ++ +AV RKM + PD +
Sbjct: 370 VGRQIFDCMSS-----PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAII 424
Query: 423 LGAC 426
L +C
Sbjct: 425 LSSC 428
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 186/445 (41%), Gaps = 58/445 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A ++F +MPE NT + N + R + + M + +H T V
Sbjct: 87 LQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYESVKPSHITFATVFS 146
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C V G + H + K GF N ++ AL+ MY+ G DA++VF + E N V
Sbjct: 147 ACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVT 206
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVIS------------GYIESGDMVSA 168
+T M+ V G L L + + + S+ +S G + +S
Sbjct: 207 FTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLST 266
Query: 169 RELFDKMPN--------RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGG 220
++ RD+ N+LL+ YA +GD+ S E VFE + + +V SWN++I G
Sbjct: 267 NAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISG 326
Query: 221 YARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG 280
Y ALE F++M G P+D T + +L AC + G + +G+
Sbjct: 327 YGNRCDSEKALECFQRMQCCG-YEPDDVTYINMLTACVKSGDVKVGR------------- 372
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+F+C+ +ISWN +++G + +A+ LF +M+
Sbjct: 373 ----------------------QIFDCMSSPSLISWNAILSGYNQSADHGEAVELFRKMQ 410
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+ PD T ILS+C +GL+ G ++ + + ++ + G +
Sbjct: 411 FQWQNPDRTTLAIILSSCAELGLLEAG-KQVHAVSQKLGFYDDVYVASSLINVYSKCGKM 469
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGA 425
+ + K+ E D V W S++
Sbjct: 470 EVSKHVFSKLS-ELDVVCWNSMIAG 493
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 248 FTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
L+ +L +C +L K +H + F+ N LID+Y+KC I SA VF+
Sbjct: 6 LNLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDK 65
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+ ++I S+N +++ N A LF QM + + V+ I++ G R
Sbjct: 66 IPHKNIFSYNAILSAFCKSNNLQYACRLFLQMP----ERNTVSLNTIITTMVKNGYERQA 121
Query: 368 FLYFQSMVDHYSIIP 382
+ M+ + S+ P
Sbjct: 122 LDTYDLMMVYESVKP 136
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G AR FD MP N TWN M +GY+ + V L+ +M + P + T V+
Sbjct: 570 VGAARYYFDMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKP-DDITFVAVLT 628
Query: 61 SCSKAGAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER- 116
+CS + V EG ++ ++ K + + C +I+ G + + MP +
Sbjct: 629 ACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTC--IIDCLGRVGRFNEVEVILDTMPYKD 686
Query: 117 NVVVWTAMISAYISCGDVGSGRR 139
+ +VW ++S+ +V +R
Sbjct: 687 DTIVWEVVLSSCRVHANVSLAKR 709
>Medtr7g078360.1 | PPR containing plant-like protein | HC |
chr7:29634869-29632890 | 20130731
Length = 632
Score = 305 bits (780), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/535 (32%), Positives = 276/535 (51%), Gaps = 86/535 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP+ A WN M +GY
Sbjct: 138 ARKLFDEMPDRTVADWNVMISGYW------------------------------------ 161
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K G E + V + N T +I ++ KG++ A F +MPER+VV W A
Sbjct: 162 KCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNA 221
Query: 124 MISAYISCGDVGSGRRLLD--LAP---ERDVVMWSIVISG-------------------- 158
M+S Y G RL + L+P + D W+ VIS
Sbjct: 222 MLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDK 281
Query: 159 ----------------YIESGDMVSARELFDKM---PNRDVMSWNTLLNGYANSGDVGSF 199
+ + G++ +A ++F+++ R + WN +++ YA GD+ S
Sbjct: 282 VGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSA 341
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV-VPNDFTLVAVLLACS 258
+ +F++MP+R+ SWN +I GY +NG A++ F++M+ D P++ T+V+V AC
Sbjct: 342 KHLFDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACG 401
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
LG L +G W + + ++ V N+LI+MY++CG ++ AV +F + RD++S+NT
Sbjct: 402 HLGELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVSYNT 461
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
+I+G A HG+ +++ L +MK +PD +T++ IL+AC+H GL+ +G F+S+
Sbjct: 462 LISGFAEHGHGMESIELLSKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESIK--- 518
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
P ++HY CM D+LGRAG L++A+ ++ MPMEP A I+ SLL A HK VE+ ELA
Sbjct: 519 --FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELA 576
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECN 493
L ++EP N N+ +LSNIY GRW++ +++ MR G +K G S +E N
Sbjct: 577 AAKLFKVEPHNSGNYALLSNIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLEHN 631
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 130/466 (27%), Positives = 209/466 (44%), Gaps = 82/466 (17%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+F P+ + M YS H V V LF M + N ++++S A
Sbjct: 43 IFHAATHPDVRVFTFMLKYYSQIGVHSQVFVSLFKHMLQHCDIKPNASFYSVMMKS---A 99
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
G+ H + K G+ + ++ ++ +Y+ G + A K+F EMP+R V W MI
Sbjct: 100 GSESMLFLAHVL--KSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMI 157
Query: 126 SAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
S Y CG+ L D R+V+ W+ +I+G+ + G++ +AR FDKMP R V+
Sbjct: 158 SGYWKCGNEEEASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVV 217
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
SWN +L+GYA G PE + + F ML G
Sbjct: 218 SWNAMLSGYAQGG-----------APE--------------------ETIRLFNDMLSPG 246
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIE- 299
+V P++ T V+ +CS LG + + V + +G++ N FV AL+DM+AKCG +E
Sbjct: 247 NVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEA 306
Query: 300 ---------------------------------SAVDVFNCLDRRDIISWNTMINGLAMH 326
SA +F+ + +RD +SWN+MI G +
Sbjct: 307 AHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIAGYTQN 366
Query: 327 GNTADALSLFDQMKNSRE--QPDGVTFVGILSACTHMGLVRDGFLYFQSM-VDHYSIIPQ 383
G + A+ LF++M +S + +PD VT V + SAC H+G + G + V+H I
Sbjct: 367 GESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHIQI--S 424
Query: 384 IEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
I Y + ++ R G + AV ++M D V + +L+ H
Sbjct: 425 ISVYNSLINMYSRCGSMQDAVLIFQEMATR-DLVSYNTLISGFAEH 469
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 129/324 (39%), Gaps = 72/324 (22%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+RD N +L YA G + K+F+EMP+R V WNV+I GY + G +A F
Sbjct: 116 DRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHV 175
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M GD SR N+ +I +AK G
Sbjct: 176 M---GDQ------------EISR---------------------NVITWTTMITGHAKKG 199
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF-DQMKNSREQPDGVTFVGIL 355
+++A F+ + R ++SWN M++G A G + + LF D + QPD T+ ++
Sbjct: 200 NLKTARMYFDKMPERSVVSWNAMLSGYAQGGAPEETIRLFNDMLSPGNVQPDETTWATVI 259
Query: 356 SACTHMG-------LVRD-----GFL--YF--QSMVDHYS----------IIPQIEHY-- 387
S+C+ +G +VR GF YF +++D ++ I Q+ Y
Sbjct: 260 SSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKY 319
Query: 388 ------GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
M R G L A KMP + D V W S++ + A F+
Sbjct: 320 RSSVPWNAMISAYARVGDLPSAKHLFDKMP-QRDTVSWNSMIAGYTQNGESFKAIKLFEE 378
Query: 442 LIELEPKNPANFVMLSNIYKDLGR 465
+I E + V + +++ G
Sbjct: 379 MISSEDSRKPDEVTMVSVFSACGH 402
>Medtr2g058990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:24361845-24364937 | 20130731
Length = 975
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 285/540 (52%), Gaps = 17/540 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD E N +WN+M GYS R L +M +N TL V+ C
Sbjct: 353 ARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCE 411
Query: 64 KAGAVREGEQVHCVAAKRGF-KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ + +++H A + GF + + + A + Y+ GS+ A VF M + V W
Sbjct: 412 EEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWN 471
Query: 123 AMISAYISCGDVGSGRRLLDL-------APERDVVMWSIVISGYIESGDMVSARELFDKM 175
A+I ++ G R+ LDL E D+ + ++S + +E+ M
Sbjct: 472 ALIGGHV---QNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSM 528
Query: 176 PNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D +L++ Y G + + F+ M E+N+ WN +I G+++N DAL
Sbjct: 529 LRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDAL 588
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F QML + P++ +++ L ACS++ AL +GK +H +A + FV +LIDM
Sbjct: 589 DMFHQML-SSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDM 647
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
YAKCG +E + ++F+ + + ++WN +I G +HG+ A+ LF M+N+ +PD VTF
Sbjct: 648 YAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTF 707
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+ +L+AC H GLV +G Y M + I P++EHY C+ D+LGRAG L++A+ V ++P
Sbjct: 708 IALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELP 767
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+PD+ IW+SLL +CR +++++I E L+EL P N+V++SN Y LG+W +V +
Sbjct: 768 DKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWDEVRK 827
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
++ M++ G +K GCS IE V F DE ++ I + L + GY P+
Sbjct: 828 MRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKIQQTWIELEKKINKIGYKPD 887
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/387 (32%), Positives = 187/387 (48%), Gaps = 29/387 (7%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF+ N WNA+ +GY RD V +F EM ++FTLP V+++C
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
VR GE VH A K + F+ ALI MY G V A KVF +MP+RN+V W +++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 127 AYISCG----DVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
A + G G + LL+ L P DV VI G+ V +F + +
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMP--DVATMVTVIPLCARQGE-VRLGMVFHGLALK 327
Query: 179 -----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
++ ++LL+ Y+ G + +V + E+NV SWN +IGGY+++ F A E
Sbjct: 328 LGLCGELKVNSSLLDMYSKCGYLCE-ARVLFDTNEKNVISWNSMIGGYSKDRDFRGAFEL 386
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMY 292
++M +E V N+ TL+ VL C K +H YA G+ + + V NA + Y
Sbjct: 387 LRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGY 446
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG + A VF ++ + + SWN +I G +G AL L+ M+ S +PD T
Sbjct: 447 AKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIA 506
Query: 353 GILSACT-----------HMGLVRDGF 368
+LSAC H ++R+GF
Sbjct: 507 SLLSACARLKSLSCGKEIHGSMLRNGF 533
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 227/493 (46%), Gaps = 51/493 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVVRSC 62
A KVFDKMP+ N +WN++ + LF + N + T+ V+ C
Sbjct: 250 AVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLC 309
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ G VR G H +A K G + ++L++MYS G + +A +V + E+NV+ W
Sbjct: 310 ARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA-RVLFDTNEKNVISWN 368
Query: 123 AMISAYISCGDV-GSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARE-----LF 172
+MI Y D G+ L + E V + + + + E + +E L
Sbjct: 369 SMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALR 428
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D + N + GYA G + E VF M + V SWN LIGG+ +NG AL+
Sbjct: 429 HGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALD 488
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+ M G + P+ FT+ ++L AC+RL +L GK +H G++ + F+ +L+ +Y
Sbjct: 489 LYLLMRGSG-LEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY 547
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+CG I A F+ ++ ++++ WNTMING + + DAL +F QM +S+ PD ++ +
Sbjct: 548 VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISII 607
Query: 353 GILSACTHMGLVRDG-----FLYFQSMVDHY----SIIPQIEHYGCM---ADLLGRAGLL 400
G L AC+ + +R G F + +H S+I GCM ++ R L
Sbjct: 608 GALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLK 667
Query: 401 DQ------------------AVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ A+ + M PD+V + +LL AC H + L +
Sbjct: 668 GEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTAC-NHAGLVAEGLEY 726
Query: 440 ----QHLIELEPK 448
Q L ++PK
Sbjct: 727 LGQMQSLFGIKPK 739
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 6/260 (2%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF +N++ WN L+ GY RN F DA+ F +M+ + VP++FTL V+ AC +
Sbjct: 151 VFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVY 210
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+ +G+ VH +A ++FVGNALI MY K G +ESAV VF+ + +R+++SWN+++
Sbjct: 211 DVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMY 270
Query: 322 GLAMHGNTADALSLFDQMKNSRE--QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
+G ++ LF + N E PD T V ++ C G VR G + F +
Sbjct: 271 ACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLG-MVFHGLALKLG 329
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
+ +++ + D+ + G L +A E + + W S++G ++ A
Sbjct: 330 LCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGGYSKDRDFRGA-FEL 386
Query: 440 QHLIELEPKNPANFVMLSNI 459
+++E K N V L N+
Sbjct: 387 LRKMQMEDKVKVNEVTLLNV 406
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 173/358 (48%), Gaps = 27/358 (7%)
Query: 15 NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQV 74
NT N FN L + DVV + + + P + ++++ C + + G ++
Sbjct: 66 NTGNLNQAFN--FLQSNLNDVV------SSSNSKPKQ--LIGLLLQLCGEYKNIEIGRKI 115
Query: 75 H-CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGD 133
H ++ F+ + L T L+ MYS S D+ VF +N+ +W A++S Y+
Sbjct: 116 HNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRKNLFLWNALLSGYLRNSL 175
Query: 134 VGSGR-------RLLDLAPER---DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
L + P+ V+ + V + G+ V L K+ + DV
Sbjct: 176 FRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLS-DVFVG 234
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD- 242
N L+ Y G V S KVF++MP+RN+ SWN ++ NG F ++ FK +L GD
Sbjct: 235 NALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLL-NGDE 293
Query: 243 -VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
++P+ T+V V+ C+R G + +G H A +G G + V ++L+DMY+KCG + A
Sbjct: 294 GLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSREQPDGVTFVGILSAC 358
+F+ + +++ISWN+MI G + + A L +M+ + + + VT + +L C
Sbjct: 354 RVLFD-TNEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVC 410
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 153/331 (46%), Gaps = 12/331 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A VF M ++WNA+ G+ R + L+ M + P + FT+ ++
Sbjct: 452 LHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP-DLFTIASLLS 510
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ ++ G+++H + GF+ + F+C +L+ +Y G + A F M E+N+V
Sbjct: 511 ACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVC 570
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W MI+ + + + I I G + + VSA L ++ V
Sbjct: 571 WNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAV 630
Query: 181 MSWNT--------LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
S T L++ YA G + + +F+ + + +WNVLI GY +G A+E
Sbjct: 631 KSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIE 690
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
FK M G P+ T +A+L AC+ G + G +++ G K + ++DM
Sbjct: 691 LFKSMQNAG-FRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDM 749
Query: 292 YAKCGVIESAVDVFNCL-DRRDIISWNTMIN 321
+ G + A+++ N L D+ D W+++++
Sbjct: 750 LGRAGRLNEALELVNELPDKPDSRIWSSLLS 780
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 115/255 (45%), Gaps = 7/255 (2%)
Query: 250 LVAVLLA-CSRLGALDMGKWVHVY-AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNC 307
L+ +LL C +++G+ +H + + S ++ ++ + L+ MY+ C + VFN
Sbjct: 95 LIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNA 154
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRD 366
R+++ WN +++G + DA+ +F +M + E PD T ++ AC + VR
Sbjct: 155 SRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRL 214
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
G ++ + + + G+ G ++ AV KMP + + V W S++ AC
Sbjct: 215 G-EAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLVSWNSVMYAC 272
Query: 427 RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPG 486
+ E + F+ L+ + + + + R +V RL + KL
Sbjct: 273 LENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEV-RLGMVFHGLAL-KLGL 330
Query: 487 CSVIECNDSVVEFYS 501
C ++ N S+++ YS
Sbjct: 331 CGELKVNSSLLDMYS 345
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 76/153 (49%), Gaps = 7/153 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M ++ +FD++ TWN + GY + R + LF M A P + T ++
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSMQNAGFRP-DSVTFIALLT 712
Query: 61 SCSKAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NV 118
+C+ AG V EG E + + + G K +++M G + +A ++ E+P++ +
Sbjct: 713 ACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDS 772
Query: 119 VVWTAMISAYISCGDVGSGR----RLLDLAPER 147
+W++++S+ + D+ G +LL+L P++
Sbjct: 773 RIWSSLLSSCRNYRDLDIGEKVANKLLELGPDK 805
>Medtr6g012850.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:3995998-3993764 | 20130731
Length = 637
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 179/516 (34%), Positives = 277/516 (53%), Gaps = 43/516 (8%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGF--KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
++R CS+A A+R G+Q+H A G N FL AL+ +Y + A K+F E+P+
Sbjct: 26 LLRQCSRATALRPGQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIPQ 85
Query: 116 --RNVVVWTA----------------------------MISAYISCGDVGSGRRLLDLAP 145
++ V +TA M+ A +C +G G +
Sbjct: 86 SHKDSVDYTALIRHCPPFESLKLFIQMRQFDLPLDGVVMVCALNACARLGGGDTKVGSQM 145
Query: 146 ERDVVMWSIV---------ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
VV + V ++ Y++ G + AR++F+ + R V+SW+ L G V
Sbjct: 146 HVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGLVKWESV 205
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
S +F+EMPERN +W V+I GY NG +A K+M+ + TL +VL A
Sbjct: 206 ESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSA 265
Query: 257 CSRLGALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
CS+ G + +G+WVH YA + +G + VG +L+DMYAKCG I +A+ VF + +R++++
Sbjct: 266 CSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVA 325
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
WN M+ GLAMHG A+ +F M +PDGVTF+ +LSAC+H GLV G+ YF +
Sbjct: 326 WNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDGVTFMALLSACSHSGLVEKGWDYFHDLE 384
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
Y I P+IEHY CM LLGRAG L++A V+ M + P+ V+ SL+G+C H +++
Sbjct: 385 PVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCYAHGRLQLG 444
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
E + L+E++P N ++LSN+Y G+ + L+ ++ G +K+PG S I +
Sbjct: 445 EKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGMSSIYVDGK 504
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
+ +F + D+ H T IY L + LR GYVPN
Sbjct: 505 LHQFIAGDKSHTRTSEIYMKLDEMICRLRSAGYVPN 540
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 52/309 (16%)
Query: 3 HARKVFDKMPE--PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
HARK+FD++P+ ++ + A+ ES + LF +M R PL+ + +
Sbjct: 75 HARKLFDEIPQSHKDSVDYTALIRHCPPFESLK----LFIQM-RQFDLPLDGVVMVCALN 129
Query: 61 SCSKAGA--VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+C++ G + G Q+H K GF +C AL+ +Y G VG+A K+F + R+V
Sbjct: 130 ACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSV 189
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP-- 176
V W+ + + V SGR L D PER+ V W+++I GY+ +G A L +M
Sbjct: 190 VSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFG 249
Query: 177 ---------------------------------------NRDVMSWNTLLNGYANSGDVG 197
+ VM +L++ YA G +
Sbjct: 250 CGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRIN 309
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+ VF M +RNV +WN ++GG A +G A++ F M+ E V P+ T +A+L AC
Sbjct: 310 AALSVFRSMLKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVEE--VKPDGVTFMALLSAC 367
Query: 258 SRLGALDMG 266
S G ++ G
Sbjct: 368 SHSGLVEKG 376
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 139/321 (43%), Gaps = 49/321 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
R +FD+MPE N W M GY ++ +L EM L+ TL V+ +CS
Sbjct: 208 GRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTLCSVLSACS 267
Query: 64 KAGAVREGEQVHCVAAKR-GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++G V G VHC A K G + + T+L++MY+ G + A VF M +RNVV W
Sbjct: 268 QSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSMLKRNVVAWN 327
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
AM+ G G+ +D+ P MV + D ++
Sbjct: 328 AMLGGL---AMHGMGKIAVDMFP------------------SMVEEVK-------PDGVT 359
Query: 183 WNTLLNGYANSGDVGS-------FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ LL+ ++SG V E V+ PE Y+ ++G R GR +A K
Sbjct: 360 FMALLSACSHSGLVEKGWDYFHDLEPVYRIKPEIEHYA--CMVGLLGRAGRLEEAEIMVK 417
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH---VYAESIGYKGNMFVGNALIDMY 292
M + PN+ L +++ +C G L +G+ + + + + + ++ + N MY
Sbjct: 418 NMRIP----PNEVVLGSLIGSCYAHGRLQLGEKIMRDLLEMDPLNTEYHIVLSN----MY 469
Query: 293 AKCGVIESAVDVFNCLDRRDI 313
A G +E A + L +R I
Sbjct: 470 ALSGKVEKANSLRQVLKKRGI 490
>Medtr6g060510.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20818019-20812038 | 20130731
Length = 1056
Score = 303 bits (776), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 255/434 (58%), Gaps = 15/434 (3%)
Query: 111 GEMPERNVVVWTAMISAYISCGD---VGSGRRLLDLAP----ERDVVMWSIVISGYIESG 163
G P R + + A+ +CG+ V G ++ A + +V + + +I + + G
Sbjct: 106 GYFPNR-----YSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWG 160
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
+ AR +FD +RD SWNT++ Y SG++ +++F+EM ER+V SW+ +I GY +
Sbjct: 161 RVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQ 220
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
G F +AL+ F +ML + +V PN++T+V+ L ACS L ALD GKW+HVY K N
Sbjct: 221 VGCFMEALDFFHKML-QSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDR 279
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ +LIDMYAKCG I+SA VF+ +R + WN MI G AMHG +A+++F++MK
Sbjct: 280 LLASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVE 339
Query: 343 REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQ 402
+ P+ VTF+ +L+AC+H +V++G YF+ M Y I P+IEHYGCM DLL R+G L
Sbjct: 340 KVSPNKVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKD 399
Query: 403 AVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKD 462
+ + MPM PD IW +LL ACR +K++E + + E++P + V+L NIY
Sbjct: 400 SEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYST 459
Query: 463 LGRWQDVARLKIAMR-DTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTM 521
GRW + ++ ++ +K+PG S IE N EF D HP++ IY L +
Sbjct: 460 SGRWNEARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMIS 519
Query: 522 LLRLHGYVPNLVDV 535
L++ GYVP L +V
Sbjct: 520 KLKIAGYVPELGEV 533
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 44/371 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ +A K+FD++P+P+ +N M +S++ S+ D + +F + R + N ++
Sbjct: 59 LTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAF 118
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C VREGEQV A K G N F+ ALI M+ G V DA VF +R+
Sbjct: 119 GACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFY 178
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM---- 175
W MI AY+ G++ + L D ERDVV WS +I+GY++ G + A + F KM
Sbjct: 179 SWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSE 238
Query: 176 --PN----------------------------RDVMSWN-----TLLNGYANSGDVGSFE 200
PN RD + N +L++ YA G++ S
Sbjct: 239 VKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSAS 298
Query: 201 KVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
VF E +R V+ WN +IGG+A +G+ +A+ F++M VE V PN T +A+L ACS
Sbjct: 299 SVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVE-KVSPNKVTFIALLNACSH 357
Query: 260 LGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWN 317
+ GK + + A G + ++D+ ++ G ++ + ++ + D+ W
Sbjct: 358 GYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMILSMPMAPDVAIWG 417
Query: 318 TMINGLAMHGN 328
++N ++ +
Sbjct: 418 ALLNACRIYKD 428
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGR-FSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
K+F+++P+ +++ +N +I ++ + + D++ F+ ++ + PN ++ V AC
Sbjct: 63 HKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVFAFGACG 122
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
+ G+ V +A +G GN+FV NALI M+ K G +E A +VF+ RD SWNT
Sbjct: 123 NGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNT 182
Query: 319 MINGLAMHGNTADALSLFDQMK-------------------------------NSREQPD 347
MI GN A LFD+M S +P+
Sbjct: 183 MIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQSEVKPN 242
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
T V L+AC+++ + G + + +I + D+ + G +D A S
Sbjct: 243 EYTMVSALAACSNLVALDQG-KWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDSASSVF 301
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL-IELEPKNPANFVMLSN 458
+ ++ W +++G H E A F+ + +E N F+ L N
Sbjct: 302 HEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPNKVTFIALLN 353
>Medtr7g079860.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:30342642-30345393 | 20130731
Length = 755
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 175/584 (29%), Positives = 298/584 (51%), Gaps = 58/584 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVV 59
+ HA K+FD++ NT TW + +G++ ++V LF EM A P N +TL V+
Sbjct: 83 LDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGACP-NQYTLSSVL 141
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ CS+ ++ G+ +H + G + L +++++Y A F M E++VV
Sbjct: 142 KCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELMIEKDVV 201
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD--------------- 164
W MI AY+ GDV + P +DVV W+ +I G I+ G
Sbjct: 202 SWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHG 261
Query: 165 -------------MVSARELFD--KMPNRDVMSWNTLLNGYANS------GDVGSFEK-- 201
+VS+ L + + + V+++ +GY S G G +K
Sbjct: 262 TEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKAS 321
Query: 202 -----------------VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
V + P+ + SW+ ++ GY NG++ D ++ F+ M+ E +V
Sbjct: 322 TILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCE-LIV 380
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
+ T+ ++ AC+ G L+ GK +H Y + IG + + +VG++LIDMY+K G ++ A+ +
Sbjct: 381 VDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMI 440
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F + +++ W +MI+G A+HG +A+SLF+ M N P+ VTFVG+L+AC+H+GL+
Sbjct: 441 FEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLI 500
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+G YF+ M D Y I P++EHY M +L GRAG L +A +F+ + + +W S L
Sbjct: 501 EEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLS 560
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
+CR HKN + + + L++ P +P +++LSN+ +W + A ++ M G +K
Sbjct: 561 SCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQ 620
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
PG S ++ D + F D HP+ + IY L L L+ GY
Sbjct: 621 PGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGY 664
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 194/451 (43%), Gaps = 74/451 (16%)
Query: 93 LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER----- 147
L+ +Y ++ A+K+F E+ +N WT +IS + GS + L E
Sbjct: 73 LLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAA--GSSELVFSLFREMQADGA 130
Query: 148 -------------------------------------DVVMWSIVISGYIESGDMVSARE 170
DVV+ + ++ Y++ + A
Sbjct: 131 CPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAES 190
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
F+ M +DV+SWN ++ Y GDV ++F P ++V SWN +I G + G A
Sbjct: 191 FFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLA 250
Query: 231 LEAFKQMLVEG-DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
LE M+ G + P F++ +L+ S L +++G+ +H + G + ++ ++L+
Sbjct: 251 LEQLYCMVAHGTEFSPVTFSIALILV--SSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLV 308
Query: 290 DMYAKCGVIESAVDVF---------------NCLD-RRDIISWNTMINGLAMHGNTADAL 333
+MY KCG ++ A + C + + ++SW++M++G +G D +
Sbjct: 309 EMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGM 368
Query: 334 SLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY--SIIPQIEHY--GC 389
F M D T I+SAC + G+ L F + Y I +I+ Y
Sbjct: 369 KTFRSMVCELIVVDIRTVATIISACANAGI-----LEFGKQIHAYIQKIGLRIDAYVGSS 423
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE-PK 448
+ D+ ++G LD A+ ++ EP+ V+WTS++ C H + A F+ ++ L
Sbjct: 424 LIDMYSKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIP 482
Query: 449 NPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
N FV + N +G ++ R M+DT
Sbjct: 483 NEVTFVGVLNACSHVGLIEEGCRYFRMMKDT 513
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD-A 230
F K + + S N LL Y S ++ K+F+E+ +N +W +LI G+AR S+
Sbjct: 59 FKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELV 118
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
F++M +G PN +TL +VL CSR + GK +H + G G++ + N+++D
Sbjct: 119 FSLFREMQADG-ACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILD 177
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
+Y KC E A F + +D++SWN MI G+ +L +F N D V+
Sbjct: 178 LYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPN----KDVVS 233
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDH 377
+ I+ G R MV H
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAH 260
>Medtr2g436470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:14170762-14173219 | 20130731
Length = 503
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/376 (41%), Positives = 221/376 (58%), Gaps = 6/376 (1%)
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
+IS Y A +F ++ N + + N ++ SG+ +KVF++MP R+V +W
Sbjct: 45 LISTYAHCQQPNIAHHVFSRVMN--LFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTW 102
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
N +IGGY +N RF DAL F+ ML + V P+ FT +V+ C+RLG+ KWVH
Sbjct: 103 NTVIGGYVKNLRFLDALSIFRVML-KAKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMV 161
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+ N + AL+DMYAKCG ++ + +VF C+ R + WN MINGLA+HG+ DA
Sbjct: 162 EKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNAMINGLAIHGHALDATV 221
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+F +M+ PD VTFVGIL C+H GLV G YF+ M + + I PQ++HYG M DLL
Sbjct: 222 VFSRMEVENVLPDSVTFVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLL 281
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
GRAG L++A S ++ M +EPD VIW SLL ACR H E+ E A ++ LE +FV
Sbjct: 282 GRAGHLEEAYSMIKAMSVEPDVVIWRSLLSACRIHGKKELGEFAIANISRLE---SGDFV 338
Query: 455 MLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYR 514
+LSN+Y W R++ M+ G RK G S IE S+ +F + D+ H E ++IYR
Sbjct: 339 LLSNMYCSFKNWHGAERVRHMMKKGGVRKKRGKSWIELGGSIHQFNAADQSHAEMKAIYR 398
Query: 515 ALRGLTMLLRLHGYVP 530
L GL +L G+ P
Sbjct: 399 VLEGLMQRAKLEGFTP 414
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 120/271 (44%), Gaps = 39/271 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+KVFDKMP + TWN + GY D + +F M +A P + FT VV C+
Sbjct: 87 AKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLKAKVEP-DGFTFASVVTGCA 145
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+ + VH + ++ + N L AL++MY+ G V + +VF + +V VW A
Sbjct: 146 RLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDVSKEVFECVVRDHVSVWNA 205
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAR-ELFDKMPNRDVMS 182
MI+ + I G+ +V +R E+ + +P D ++
Sbjct: 206 MING--------------------------LAIHGHALDATVVFSRMEVENVLP--DSVT 237
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDALEAFKQM 237
+ +L G ++ G V K FE M R + + ++ R G +A K M
Sbjct: 238 FVGILKGCSHCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAM 297
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
VE DVV ++L AC G ++G++
Sbjct: 298 SVEPDVV----IWRSLLSACRIHGKKELGEF 324
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 127/312 (40%), Gaps = 44/312 (14%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+++ C + + + H G+ L +LI Y+ A+ VF + N
Sbjct: 10 ILKRCKASKNSKTVAKTHARIIILGYATYPSLVASLISTYAHCQQPNIAHHVFSRV--MN 67
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
+ +I + + G+ +++ D P RDVV W+ VI GY+++ + A +F M
Sbjct: 68 LFNMNLVIESLVKSGECDIAKKVFDKMPVRDVVTWNTVIGGYVKNLRFLDALSIFRVMLK 127
Query: 178 RDV----------------------MSW-----------------NTLLNGYANSGDVGS 198
V W L++ YA G V
Sbjct: 128 AKVEPDGFTFASVVTGCARLGSFCNAKWVHGLMVEKKVELNYILTAALVDMYAKCGRVDV 187
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
++VFE + +V WN +I G A +G DA F +M VE +V+P+ T V +L CS
Sbjct: 188 SKEVFECVVRDHVSVWNAMINGLAIHGHALDATVVFSRMEVE-NVLPDSVTFVGILKGCS 246
Query: 259 RLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISW 316
G +++G K+ + + + ++D+ + G +E A + + D++ W
Sbjct: 247 HCGLVEVGRKYFEMMQNRFFIQPQLKHYGTMVDLLGRAGHLEEAYSMIKAMSVEPDVVIW 306
Query: 317 NTMINGLAMHGN 328
++++ +HG
Sbjct: 307 RSLLSACRIHGK 318
>Medtr4g094658.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38663296-38660628 | 20130731
Length = 745
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 161/520 (30%), Positives = 278/520 (53%), Gaps = 44/520 (8%)
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
I+++SC +V G+Q+H + G + F+ L+ YS G + +A K+F MP R
Sbjct: 77 ILIQSCIPTNSVSLGKQLHSLIFTSGCSSDKFISNHLLNFYSKFGELNNAVKLFDRMPRR 136
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
N + MI AY+ G++ + + L D ER+V W+ +++G ++ G A LF +M
Sbjct: 137 NYMSCNIMIKAYLEMGNIENAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMN 196
Query: 176 -----PNRDVMSWNTLLNG-----------------------------------YANSGD 195
P D S+ ++L G Y +G
Sbjct: 197 VLGFVP--DEYSFGSVLRGCAHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGS 254
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ + E++ + MP N+ +WN L+ G A+N F L+ + M + G P+ T V+V+
Sbjct: 255 LCNGERIIKWMPNCNLVAWNTLMAGKAQNRCFEGVLDHYCMMKMAG-YRPDKITFVSVIS 313
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
+CS L L GK +H G + V ++L+ MY+KCG ++ ++ F + RD++
Sbjct: 314 SCSELATLCQGKQIHAEVIKAGASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVI 373
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
W++MI HG A+ LF+ + + VTF+ +L AC+H GL G +F MV
Sbjct: 374 WSSMIAAYGFHGQCEKAIKLFNDKEKENMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMV 433
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
+ Y + ++EHY C+ DLLGR+G L++A + +R MP+ DA+IW +LL AC+ HKN E+A
Sbjct: 434 EKYGLKARLEHYTCVVDLLGRSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKNEEMA 493
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
+ ++ ++P++PA++V+++ I+ RWQ+V+ ++ AM+D +K PG S +E +
Sbjct: 494 RRVAEEVLRIDPQDPASYVLIAGIHASAKRWQNVSEVRRAMKDKMVKKEPGVSWVEVKNQ 553
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
V +F++ D+ HP+ I + L LT +++ GYVP++ V
Sbjct: 554 VHQFHTGDKSHPKFVEINQYLEELTSEMKMQGYVPDISSV 593
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 173/346 (50%), Gaps = 7/346 (2%)
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDL----APERDV 149
I +KG + A++ F +++ +I + I V G++L L D
Sbjct: 48 ITTLCSKGHIKKAFESFLCDIWTEPRLFSILIQSCIPTNSVSLGKQLHSLIFTSGCSSDK 107
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER 209
+ + +++ Y + G++ +A +LFD+MP R+ MS N ++ Y G++ + + +F+EM ER
Sbjct: 108 FISNHLLNFYSKFGELNNAVKLFDRMPRRNYMSCNIMIKAYLEMGNIENAKNLFDEMTER 167
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
NV +WN ++ G + G +AL F +M V G VP++++ +VL C+ L AL +G+ V
Sbjct: 168 NVATWNAMVTGLVKFGLNEEALLLFSRMNVLG-FVPDEYSFGSVLRGCAHLRALFVGEQV 226
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
H Y G++ N VG +L MY K G + + + + ++++WNT++ G A +
Sbjct: 227 HAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWNTLMAGKAQNRCF 286
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
L + MK + +PD +TFV ++S+C+ + + G + V +
Sbjct: 287 EGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQG-KQIHAEVIKAGASSVVSVISS 345
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
+ + + G L ++ + E D VIW+S++ A H E A
Sbjct: 346 LVSMYSKCGSLQDSIKAFLECE-ERDVVIWSSMIAAYGFHGQCEKA 390
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 12/336 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A+ +FD+M E N ATWNAM G + + ++LF+ MN P + ++ V+R C
Sbjct: 156 NAKNLFDEMTERNVATWNAMVTGLVKFGLNEEALLLFSRMNVLGFVP-DEYSFGSVLRGC 214
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ A+ GEQVH AK GF++NS + +L MY GS+ + ++ MP N+V W
Sbjct: 215 AHLRALFVGEQVHAYVAKCGFEFNSVVGCSLAHMYMKAGSLCNGERIIKWMPNCNLVAWN 274
Query: 123 AMIS--AYISCGD-VGSGRRLLDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNR 178
+++ A C + V ++ +A R D + + VIS E + +++ ++
Sbjct: 275 TLMAGKAQNRCFEGVLDHYCMMKMAGYRPDKITFVSVISSCSELATLCQGKQIHAEVIKA 334
Query: 179 DVMSWNTLLNG----YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
S ++++ Y+ G + K F E ER+V W+ +I Y +G+ A++ F
Sbjct: 335 GASSVVSVISSLVSMYSKCGSLQDSIKAFLECEERDVVIWSSMIAAYGFHGQCEKAIKLF 394
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYA 293
E ++ N+ T +++L ACS G D G + + E G K + ++D+
Sbjct: 395 NDKEKE-NMAGNEVTFLSLLYACSHSGLKDKGLDFFDMMVEKYGLKARLEHYTCVVDLLG 453
Query: 294 KCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+ G +E A + + D I W T+++ +H N
Sbjct: 454 RSGCLEEAETMIRSMPVSADAIIWKTLLSACKIHKN 489
>Medtr4g094692.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:38735797-38738097 | 20130731
Length = 766
Score = 301 bits (772), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 176/534 (32%), Positives = 277/534 (51%), Gaps = 21/534 (3%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF+ M + N +WNAM +G++ + M +P N T + ++ G
Sbjct: 226 VFNNMTDVNDVSWNAMISGFTSNGLYLQAFDFLINMIENGVSP-NKTTFLCISKAVGLLG 284
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV--VWTAM 124
+ +VH A + G N+ + TALI MYS G + DA +F +V W AM
Sbjct: 285 DINRCHEVHRYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAM 344
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVV--MWSIV-----ISGY-----IESGDMVSARELF 172
I+ Y G + + DV +++ I+G ++ V+ + F
Sbjct: 345 ITGYSQAGCHLEALEMFTRMCQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGF 404
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D M ++ N L + Y + + EKVF +M ++++ SW ++ Y + + AL
Sbjct: 405 DAM---EISVLNALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALA 461
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F QM EG PN FT +V+ AC L L+ G+ +H + +ALIDMY
Sbjct: 462 IFSQMCNEG-FAPNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESALIDMY 520
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG + A ++F + D ++W +I+ A HG DAL LF +M+ S + + VT +
Sbjct: 521 SKCGNLTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKANAVTLL 580
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
IL AC+H G+V DG F M Y ++P++EHY C+ DLLGR G LD+AV+F+ KMP+
Sbjct: 581 CILFACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYACVVDLLGRVGRLDEAVAFIDKMPI 640
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLI--ELEPKNPANFVMLSNIYKDLGRWQDVA 470
EPD ++W +LLGACR H N E+ E A Q ++ + EP++ + +V+LSN Y + G +D
Sbjct: 641 EPDEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGI 700
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
L+ M++ G RK PG S I V +FY+ D++HP+ + IY L LT ++
Sbjct: 701 GLRDVMKERGIRKEPGYSWISVRGEVHKFYARDQQHPQKDKIYTMLEELTRRIK 754
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 203/461 (44%), Gaps = 37/461 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD M E N +W M + +R + LF M L+ F V++SC
Sbjct: 122 ARKVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLL-LDGFAFSAVLQSCV 180
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+V GE VH RGF ++ + T+L+ +Y+ G + VF M + N V W A
Sbjct: 181 GLDSVVFGEMVHAQVVVRGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNA 240
Query: 124 MISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
MIS + S G L ++P + + G + GD+ E+ +
Sbjct: 241 MISGFTSNGLYLQAFDFLINMIENGVSPNKTTFLCISKAVGLL--GDINRCHEV-----H 293
Query: 178 RDVMSW---------NTLLNGYANSGDVGSFEKVFEEMPERNVYS--WNVLIGGYARNGR 226
R W L+N Y+ G + +F+ + + WN +I GY++ G
Sbjct: 294 RYAYEWGLDSNTSVGTALINMYSKCGVLCDARVLFDSKFANCLVNAPWNAMITGYSQAGC 353
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG-NMFVG 285
+ALE F +M + DV P+ +T V + + L L K H A G+ + V
Sbjct: 354 HLEALEMFTRM-CQNDVKPDLYTFCCVFNSIAGLKCLKSLKEAHGVALKCGFDAMEISVL 412
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
NAL D Y KC +E+ VF ++++DI+SW TM+ AL++F QM N
Sbjct: 413 NALADAYVKCESLEAGEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFA 472
Query: 346 PDGVTFVGILSACTHMGLVRDGF----LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
P+ TF +++AC + L+ G L ++ +D S I + D+ + G L
Sbjct: 473 PNHFTFSSVITACGGLCLLEYGQQIHGLICKASLDAESCIESA-----LIDMYSKCGNLT 527
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+A + ++ PD V WT+++ H VE A F+ +
Sbjct: 528 EAKNIFERIS-NPDTVTWTAIISTYAQHGLVEDALQLFRKM 567
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 144/316 (45%), Gaps = 21/316 (6%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGF--KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
+++SC + G++++ +H K GF + N ++ YS A KVF M E
Sbjct: 72 LLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSE 131
Query: 116 RNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES---------GDMV 166
RNV WT MI A G L + E+ +++ S ++S G+MV
Sbjct: 132 RNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLDSVVFGEMV 191
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
A+ + V+ +LLN YA G VF M + N SWN +I G+ NG
Sbjct: 192 HAQVVVRGFLMHAVVG-TSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGL 250
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+ A + M +E V PN T + + A LG ++ VH YA G N VG
Sbjct: 251 YLQAFDFLINM-IENGVSPNKTTFLCISKAVGLLGDINRCHEVHRYAYEWGLDSNTSVGT 309
Query: 287 ALIDMYAKCGVIESAVDVF-----NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
ALI+MY+KCGV+ A +F NCL WN MI G + G +AL +F +M
Sbjct: 310 ALINMYSKCGVLCDARVLFDSKFANCLVNA---PWNAMITGYSQAGCHLEALEMFTRMCQ 366
Query: 342 SREQPDGVTFVGILSA 357
+ +PD TF + ++
Sbjct: 367 NDVKPDLYTFCCVFNS 382
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 157 SGYIESGDMVSARELFDKMPNRDVMSW-NTLLNGYANSGDVGSFEKVFEEMPERNVYSWN 215
+G ++ + + L +RD + + N +++ Y+ D S KVF+ M ERNV+SW
Sbjct: 79 NGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSARKVFDGMSERNVFSWT 138
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
V+I +G + ALE F ML +G ++ + F AVL +C L ++ G+ VH
Sbjct: 139 VMIVASNEHGYYRYALELFCMMLEQG-LLLDGFAFSAVLQSCVGLDSVVFGEMVHAQVVV 197
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
G+ + VG +L+++YAK G+ E +V+VFN + + +SWN MI+G +G A
Sbjct: 198 RGFLMHAVVGTSLLNLYAKLGMCECSVNVFNNMTDVNDVSWNAMISGFTSNGLYLQAFDF 257
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRD 366
M + P+ TF+ I A +GL+ D
Sbjct: 258 LINMIENGVSPNKTTFLCISKA---VGLLGD 285
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 113/268 (42%), Gaps = 35/268 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
KVF KM + + +W M Y + +F++M AP NHFT V+ +C
Sbjct: 428 GEKVFYKMEKKDIVSWTTMVTAYCQCSEWGKALAIFSQMCNEGFAP-NHFTFSSVITACG 486
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G+Q+H + K S + +ALI+MYS G++ +A +F + + V WTA
Sbjct: 487 GLCLLEYGQQIHGLICKASLDAESCIESALIDMYSKCGNLTEAKNIFERISNPDTVTWTA 546
Query: 124 MISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
+IS Y G V R++ A + + V ++ G + E+F++M
Sbjct: 547 IISTYAQHGLVEDALQLFRKMEQSAVKANAVTLLCILFACSHGGMVEDGLEIFNQM---- 602
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
E + +PE Y+ V + G R GR +A+ +M +
Sbjct: 603 --------------------EGTYGVVPEMEHYACVVDLLG--RVGRLDEAVAFIDKMPI 640
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGK 267
E P++ +L AC G ++G+
Sbjct: 641 E----PDEMVWQTLLGACRIHGNAELGE 664
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 13/138 (9%)
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
PN L+ +L +C + G+L +H V G + N+ N ++ Y+KC +SA
Sbjct: 64 PNIQPLIDLLKSCEQNGSLKQANCIHGHVLKSGFGDRDNLVFLNHVVHAYSKCKDYDSAR 123
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC---- 358
VF+ + R++ SW MI HG AL LF M DG F +L +C
Sbjct: 124 KVFDGMSERNVFSWTVMIVASNEHGYYRYALELFCMMLEQGLLLDGFAFSAVLQSCVGLD 183
Query: 359 -------THMGLVRDGFL 369
H +V GFL
Sbjct: 184 SVVFGEMVHAQVVVRGFL 201
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 23/224 (10%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+ +F+++ P+T TW A+ + Y+ D + LF +M ++A N TL ++
Sbjct: 526 LTEAKNIFERISNPDTVTWTAIISTYAQHGLVEDALQLFRKMEQSAVKA-NAVTLLCILF 584
Query: 61 SCSKAGAVREGEQV-HCVAAKRGF--KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ER 116
+CS G V +G ++ + + G + + C ++++ G + +A +MP E
Sbjct: 585 ACSHGGMVEDGLEIFNQMEGTYGVVPEMEHYAC--VVDLLGRVGRLDEAVAFIDKMPIEP 642
Query: 117 NVVVWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISG-YIESGDMVSAREL 171
+ +VW ++ A G+ G +++L PE + +++S YIESG + L
Sbjct: 643 DEMVWQTLLGACRIHGNAELGETAAQKILSTQPEPEHSSTYVLLSNTYIESGLLEDGIGL 702
Query: 172 FDKMPNRDV-----MSWNTLLNGYANSGDVGSFEKVFEEMPERN 210
D M R + SW ++ G+V F ++ P+++
Sbjct: 703 RDVMKERGIRKEPGYSWISV------RGEVHKFYARDQQHPQKD 740
>Medtr1g103660.1 | PPR containing plant-like protein | HC |
chr1:46920306-46922872 | 20130731
Length = 684
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 275/525 (52%), Gaps = 14/525 (2%)
Query: 18 TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCV 77
TW ++ +G ++ F M R P N FT P V ++ + G+Q+H +
Sbjct: 75 TWTSLISGCVHNRRFLPALLHFTNMRRDNVQP-NDFTFPCVFKASALMQIPMTGKQIHGL 133
Query: 78 AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI----SCGD 133
A K G ++ F+ + +MY G GDA +F EMP RN+ W A IS + S
Sbjct: 134 ALKGGMIYDVFVGCSCFDMYCKTGFHGDACNMFDEMPHRNLATWNAYISNAVQDRRSLDV 193
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNG 189
+ + + L + E + + + ++ ++ + R+L + DV N L++
Sbjct: 194 IAAFKEFLCVHGEPNSITFCAFLNACVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDF 253
Query: 190 YANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
Y GD+ S E VF + R NV SW ++ +N A F Q V +V P DF
Sbjct: 254 YGKCGDIVSAEMVFSRIGNRKNVVSWCSMLTALVQNHEEERACMVFLQ--VRKEVEPTDF 311
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
+ +VL AC+ LG L++G+ VH A K N+FVG+AL+D+Y KCG IE+A VF+ L
Sbjct: 312 MISSVLSACAELGGLELGRSVHALAVKACVKDNIFVGSALVDLYGKCGSIENAEQVFSEL 371
Query: 309 DRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSRE-QPDGVTFVGILSACTHMGLVRD 366
++++WN MI G A G+ AL LF++M SR +P VT V ILS C+ +G V
Sbjct: 372 PESNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSRGIRPSYVTLVSILSVCSRVGAVER 431
Query: 367 GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
G F+SM +Y I P EH+ C+ DLLGR+GL+D+A F++ MP++P +W +LLGAC
Sbjct: 432 GIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWGALLGAC 491
Query: 427 RTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPG 486
R H E+ ++A + L EL+ + N V+LSN+ GRW++ ++ M+D G +K G
Sbjct: 492 RMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRKEMKDIGIKKNVG 551
Query: 487 CSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
S I + + F + D H I L L ++ GYVP+
Sbjct: 552 YSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPD 596
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 157/372 (42%), Gaps = 78/372 (20%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G A +FD+MP N ATWNA + DV+ F E P N T + +
Sbjct: 160 GDACNMFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEP-NSITFCAFLNA 218
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER-NVVV 120
C + G Q+H + G+K + + LI+ Y G + A VF + R NVV
Sbjct: 219 CVDMMRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVS 278
Query: 121 WTAMISAYI-------------------------------SCGDVGS---GRRLLDLAPE 146
W +M++A + +C ++G GR + LA +
Sbjct: 279 WCSMLTALVQNHEEERACMVFLQVRKEVEPTDFMISSVLSACAELGGLELGRSVHALAVK 338
Query: 147 R----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
++ + S ++ Y + G + +A ++F ++P ++++WN ++ GYA+ GD+ ++
Sbjct: 339 ACVKDNIFVGSALVDLYGKCGSIENAEQVFSELPESNLVTWNAMIGGYAHQGDIDMALRL 398
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
FEEM L + P+ TLV++L CSR+GA
Sbjct: 399 FEEMT------------------------------LGSRGIRPSYVTLVSILSVCSRVGA 428
Query: 263 LDMGKWVHVYAESIGYKGNMFVG----NALIDMYAKCGVIESAVDVFNCLDRRDIIS-WN 317
++ G + ++ ES+ + G ++D+ + G+++ A + + + IS W
Sbjct: 429 VERG--IQIF-ESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMPIQPTISVWG 485
Query: 318 TMINGLAMHGNT 329
++ MHG T
Sbjct: 486 ALLGACRMHGKT 497
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 7/303 (2%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+N Y+ + S + V R V +W LI G N RF AL F M + +V
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSFTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD-NV 104
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PNDFT V A + + GK +H A G ++FVG + DMY K G A +
Sbjct: 105 QPNDFTFPCVFKASALMQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFHGDACN 164
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F+ + R++ +WN I+ + D ++ F + +P+ +TF L+AC M
Sbjct: 165 MFDEMPHRNLATWNAYISNAVQDRRSLDVIAAFKEFLCVHGEPNSITFCAFLNACVDMMR 224
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ G + + + + D G+ G + A ++ + V W S+L
Sbjct: 225 LNLG-RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFSRIGNRKNVVSWCSML 283
Query: 424 GACRTHKNVEIAELAF-QHLIELEPKNPANFVMLSNIYK----DLGRWQDVARLKIAMRD 478
A + E A + F Q E+EP + +LS + +LGR +K ++D
Sbjct: 284 TALVQNHEEERACMVFLQVRKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVKD 343
Query: 479 TGF 481
F
Sbjct: 344 NIF 346
>Medtr8g031210.2 | PPR containing plant-like protein | HC |
chr8:11676602-11671244 | 20130731
Length = 611
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 275/545 (50%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 66 MNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 125
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 126 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 185
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M + Y D G+ +LDL E R W V+S +E G +
Sbjct: 186 WSTMFACY---ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 242
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y F MP+++V +W VL GYA NG
Sbjct: 243 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVH 301
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L H + G++ N F+G +L
Sbjct: 302 ESMWVFRNMLSSG-TRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASL 360
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL F QM N S +P+
Sbjct: 361 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPN 420
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 421 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLI 480
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+ + +++LSNIY W
Sbjct: 481 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWH 540
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 541 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMREVA 600
Query: 528 YVPNL 532
+ P +
Sbjct: 601 FDPQV 605
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 209/427 (48%), Gaps = 34/427 (7%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
+++++ I ++SC+ + G+ +H K + F+ +ALI++Y+ G + DA +VF
Sbjct: 14 DNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVF 73
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD---MVS 167
E P+ +VV+WT+++S Y G +PE + +S ++ S D +VS
Sbjct: 74 MEYPKPDVVLWTSIVSGYEQSG-----------SPELALAFFSRMVVSEKVSPDPVTLVS 122
Query: 168 ARELFDKMPN----RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMPERN 210
++ N R V + N+LL+ Y +G + + +F EM +++
Sbjct: 123 VASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKD 182
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
+ SW+ + YA NG +D L+ F +ML + + PN T+V+VL AC+ + L+ G +H
Sbjct: 183 IISWSTMFACYADNGAETDVLDLFIEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIH 241
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
A + G++ V AL+DMY KC E AVD FN + ++D+I+W + +G A +G
Sbjct: 242 ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVH 301
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+++ +F M +S +PD + V IL+ + +G+++ + F + V +
Sbjct: 302 ESMWVFRNMLSSGTRPDAIALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQFIGASL 360
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP 450
++ + ++ A + M + D V W+S++ A H E A F + P
Sbjct: 361 IEVYAKCSSIEDANKVFKGMTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKP 419
Query: 451 ANFVMLS 457
N +S
Sbjct: 420 NNVTFIS 426
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 155/319 (48%), Gaps = 7/319 (2%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+ D+ + L++ Y G + +VF E P+ +V W ++ GY ++G AL F +
Sbjct: 47 DNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSR 106
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+V V P+ TLV+V AC++L +G+ VH + + G + + N+L+ +Y K G
Sbjct: 107 MVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTG 166
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
I++A ++F + +DIISW+TM A +G D L LF +M + R +P+ VT V +L
Sbjct: 167 SIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLR 226
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC + + +G + + +Y + + D+ + ++AV F +MP + D
Sbjct: 227 ACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDFFNRMP-KKDV 284
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
+ W L + V + F++++ P A +L+ + +LG Q
Sbjct: 285 IAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTV-SELGILQQAVCFHA 343
Query: 475 AMRDTGFR--KLPGCSVIE 491
+ GF + G S+IE
Sbjct: 344 FVIKNGFENNQFIGASLIE 362
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%), Gaps = 14/195 (7%)
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
P+++++ L +C+ L L +GK +H + + + +MFVG+ALID+Y KCG + AV+V
Sbjct: 13 PDNYSVSIALKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEV 72
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTH--- 360
F + D++ W ++++G G+ AL+ F +M S + PD VT V + SAC
Sbjct: 73 FMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSN 132
Query: 361 --MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+G GF+ + + + + + H L G+ G + A + R+M + D +
Sbjct: 133 FKLGRSVHGFVKRKGLDNKLCLANSLLH------LYGKTGSIKNASNLFREMS-DKDIIS 185
Query: 419 WTSLLGACRTHKNVE 433
W+++ AC E
Sbjct: 186 WSTMF-ACYADNGAE 199
>Medtr8g031210.1 | PPR containing plant-like protein | HC |
chr8:11676602-11671237 | 20130731
Length = 703
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 275/545 (50%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 158 MNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 217
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 218 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 277
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M + Y D G+ +LDL E R W V+S +E G +
Sbjct: 278 WSTMFACY---ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 334
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y F MP+++V +W VL GYA NG
Sbjct: 335 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVH 393
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L H + G++ N F+G +L
Sbjct: 394 ESMWVFRNMLSSG-TRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASL 452
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL F QM N S +P+
Sbjct: 453 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPN 512
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 513 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLI 572
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+ + +++LSNIY W
Sbjct: 573 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWH 632
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 633 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMREVA 692
Query: 528 YVPNL 532
+ P +
Sbjct: 693 FDPQV 697
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 225/468 (48%), Gaps = 16/468 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +M + + +++++ I
Sbjct: 54 HAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIA 113
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA +VF E P+ +V
Sbjct: 114 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 173
Query: 119 VVWTAMISAYISCGD-----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL-- 171
V+WT+++S Y G R ++ D V V S + + R +
Sbjct: 174 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHG 233
Query: 172 FDKMPNRD--VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
F K D + N+LL+ Y +G + + +F EM ++++ SW+ + YA NG +D
Sbjct: 234 FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETD 293
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G++ V AL+
Sbjct: 294 VLDLFIEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALM 352
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMY KC E AVD FN + ++D+I+W + +G A +G +++ +F M +S +PD +
Sbjct: 353 DMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAI 412
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
V IL+ + +G+++ + F + V + ++ + ++ A +
Sbjct: 413 ALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKG 471
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
M + D V W+S++ A H E A F + P N +S
Sbjct: 472 MTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFIS 518
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 30/450 (6%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CSK Q+H K G +SF+ T L +Y+ S+ A+K+F E P + V +W
Sbjct: 15 CSKLSI----SQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYLW 70
Query: 122 TAMISAYISCGD-------VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
A++ +Y G+ + + ++ E +S+ I+ +G + L K
Sbjct: 71 NALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAG---LRKLLLGK 127
Query: 175 MP---------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
M + D+ + L++ Y G + +VF E P+ +V W ++ GY ++G
Sbjct: 128 MIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 187
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
AL F +M+V V P+ TLV+V AC++L +G+ VH + + G + +
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLA 247
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
N+L+ +Y K G I++A ++F + +DIISW+TM A +G D L LF +M + R +
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P+ VT V +L AC + + +G + + +Y + + D+ + ++AV
Sbjct: 308 PNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVD 366
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDL 463
F +MP + D + W L + V + F++++ P A +L+ + +L
Sbjct: 367 FFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTV-SEL 424
Query: 464 GRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
G Q + GF + G S+IE
Sbjct: 425 GILQQAVCFHAFVIKNGFENNQFIGASLIE 454
>Medtr8g031210.3 | PPR containing plant-like protein | HC |
chr8:11673838-11671237 | 20130731
Length = 703
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 170/545 (31%), Positives = 275/545 (50%), Gaps = 18/545 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A +VF + P+P+ W ++ +GY + S + F+ M + + TL V
Sbjct: 158 MNDAVEVFMEYPKPDVVLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVAS 217
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ + G VH ++G L +L+ +Y GS+ +A +F EM +++++
Sbjct: 218 ACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIIS 277
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE----RDVVMWSIVIS--------GYIESGDMVSA 168
W+ M + Y D G+ +LDL E R W V+S +E G +
Sbjct: 278 WSTMFACY---ADNGAETDVLDLFIEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHE 334
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ +S L++ Y F MP+++V +W VL GYA NG
Sbjct: 335 LAVNYGFEMETTVS-TALMDMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVH 393
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+++ F+ ML G P+ LV +L S LG L H + G++ N F+G +L
Sbjct: 394 ESMWVFRNMLSSG-TRPDAIALVKILTTVSELGILQQAVCFHAFVIKNGFENNQFIGASL 452
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPD 347
I++YAKC IE A VF + +D+++W+++I HG +AL F QM N S +P+
Sbjct: 453 IEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPN 512
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VTF+ ILSAC+H GL+++G F MV+ Y + P EHY M DLLGR G LD A+ +
Sbjct: 513 NVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDMALDLI 572
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
MPM+ IW +LLGACR H+N+++ E+A ++L L+ + +++LSNIY W
Sbjct: 573 NNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDANHAGYYILLSNIYCGDENWH 632
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+L+ +++ K+ G SV+E + V F + D H E++ IY L L +R
Sbjct: 633 SATKLRRLVKEKRLNKIVGQSVVELKNEVRSFVAGDRIHDESDHIYEILTKLHAKMREVA 692
Query: 528 YVPNL 532
+ P +
Sbjct: 693 FDPQV 697
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/468 (26%), Positives = 225/468 (48%), Gaps = 16/468 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL----NHFTLPIV 58
HA K+F + P WNA+ Y + + LF +M + + +++++ I
Sbjct: 54 HAHKLFQETPHKTVYLWNALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIA 113
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SC+ + G+ +H K + F+ +ALI++Y+ G + DA +VF E P+ +V
Sbjct: 114 LKSCAGLRKLLLGKMIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDV 173
Query: 119 VVWTAMISAYISCGD-----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL-- 171
V+WT+++S Y G R ++ D V V S + + R +
Sbjct: 174 VLWTSIVSGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHG 233
Query: 172 FDKMPNRD--VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
F K D + N+LL+ Y +G + + +F EM ++++ SW+ + YA NG +D
Sbjct: 234 FVKRKGLDNKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETD 293
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
L+ F +ML + + PN T+V+VL AC+ + L+ G +H A + G++ V AL+
Sbjct: 294 VLDLFIEML-DKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALM 352
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMY KC E AVD FN + ++D+I+W + +G A +G +++ +F M +S +PD +
Sbjct: 353 DMYMKCFSPEKAVDFFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAI 412
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
V IL+ + +G+++ + F + V + ++ + ++ A +
Sbjct: 413 ALVKILTTVSELGILQQA-VCFHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKG 471
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
M + D V W+S++ A H E A F + P N +S
Sbjct: 472 MTYK-DVVTWSSIIAAYGFHGQGEEALKFFYQMANHSDTKPNNVTFIS 518
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 208/450 (46%), Gaps = 30/450 (6%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CSK Q+H K G +SF+ T L +Y+ S+ A+K+F E P + V +W
Sbjct: 15 CSKLSI----SQLHSQCLKVGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHKTVYLW 70
Query: 122 TAMISAYISCGD-------VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
A++ +Y G+ + + ++ E +S+ I+ +G + L K
Sbjct: 71 NALLRSYCFEGEWVETLSLFCQMKNVCSVSIEEKPDNYSVSIALKSCAG---LRKLLLGK 127
Query: 175 MP---------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
M + D+ + L++ Y G + +VF E P+ +V W ++ GY ++G
Sbjct: 128 MIHGFLKKVRIDNDMFVGSALIDLYTKCGQMNDAVEVFMEYPKPDVVLWTSIVSGYEQSG 187
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
AL F +M+V V P+ TLV+V AC++L +G+ VH + + G + +
Sbjct: 188 SPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLA 247
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
N+L+ +Y K G I++A ++F + +DIISW+TM A +G D L LF +M + R +
Sbjct: 248 NSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMFACYADNGAETDVLDLFIEMLDKRIK 307
Query: 346 PDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVS 405
P+ VT V +L AC + + +G + + +Y + + D+ + ++AV
Sbjct: 308 PNWVTVVSVLRACACISNLEEG-MKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVD 366
Query: 406 FVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDL 463
F +MP + D + W L + V + F++++ P A +L+ + +L
Sbjct: 367 FFNRMP-KKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTV-SEL 424
Query: 464 GRWQDVARLKIAMRDTGFR--KLPGCSVIE 491
G Q + GF + G S+IE
Sbjct: 425 GILQQAVCFHAFVIKNGFENNQFIGASLIE 454
>Medtr8g087980.1 | PPR containing plant-like protein | HC |
chr8:36412954-36411351 | 20130731
Length = 515
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 258/443 (58%), Gaps = 9/443 (2%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV----VWTAMISAYISCGDVGSGRRL- 140
N F ++I Y+ + VF +M N+ +T ++ A +S + L
Sbjct: 52 NIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLS 111
Query: 141 LDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
+ L DV S VI+ + + + AR++FD+ NR+V+ W +L++GY + G V
Sbjct: 112 MKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEAR 171
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD----VVPNDFTLVAVLLA 256
VF++MP RN S++ ++ GY RNG FS+ ++ F+++ + + N LV+VL A
Sbjct: 172 DVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNA 231
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ +GA + GKW+H Y E G + ++ +G ALID Y KCG ++ A VFN + +D+ +W
Sbjct: 232 CTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVATW 291
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
+ MI GLA++GN AL LF++M+ +P+ VTFVG+L+AC H L + F M +
Sbjct: 292 SAMILGLAINGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSE 351
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
Y+I P IEHYGC+ D+L R+G + +A++F+ M +EPD IW SLL C H + E+ +
Sbjct: 352 KYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQ 411
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
++LIE EPK+ +V+L+N+Y ++G+W+ V+ ++ M+D G + G S IE + ++
Sbjct: 412 KVGKYLIEFEPKHSGRYVLLANMYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTI 471
Query: 497 VEFYSLDERHPETESIYRALRGL 519
+F++ D+ + IY L L
Sbjct: 472 HKFFADDKCCLYSREIYDVLSHL 494
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 167/372 (44%), Gaps = 51/372 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +F +P PN +N++ Y+ + +F +M P +H T +V++C
Sbjct: 40 YAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSH-TFTTLVKAC 98
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ EQV ++ K G + + +++I +S ++ A +VF E RNVV WT
Sbjct: 99 VSLSSL---EQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWT 155
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD--- 179
+++S Y SCG V R + D P R+ +S ++SGY+ +G +LF ++ +D
Sbjct: 156 SLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGC 215
Query: 180 -VMSWN----------------------------------------TLLNGYANSGDVGS 198
+ +N L++ Y G V
Sbjct: 216 ACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKG 275
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
EKVF +MP ++V +W+ +I G A NG ALE F++M G PN+ T V VL AC+
Sbjct: 276 AEKVFNKMPVKDVATWSAMILGLAINGNNKMALELFEKMEKVGP-KPNEVTFVGVLTACN 334
Query: 259 RLGAL-DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISW 316
+ + + +E ++ ++D+ A+ G ++ A+ N + D W
Sbjct: 335 HKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKALTFINSMHIEPDGAIW 394
Query: 317 NTMINGLAMHGN 328
+++NG MHG+
Sbjct: 395 GSLLNGCLMHGH 406
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 141/325 (43%), Gaps = 51/325 (15%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNR----AAAAPLNHFTLPIVV 59
AR VFDKMP N A+++AM +GY + V LF E+ + A N L V+
Sbjct: 170 ARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDKGCACLKFNGALLVSVL 229
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C+ GA EG+ +H + G +++ L TALI+ Y G V A KVF +MP ++V
Sbjct: 230 NACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWVKGAEKVFNKMPVKDVA 289
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM---- 175
W+AMI L LA +G+ A ELF+KM
Sbjct: 290 TWSAMI---------------LGLAI----------------NGNNKMALELFEKMEKVG 318
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRFSDA 230
P + +++ +L + G ++F M E+ ++ + ++ AR+G+ A
Sbjct: 319 PKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSGQVKKA 378
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALI 289
L M +E P+ ++L C G ++G+ V Y K +V L
Sbjct: 379 LTFINSMHIE----PDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSGRYV--LLA 432
Query: 290 DMYAKCGVIESAVDVFNCLDRRDII 314
+MYA G E +V + R ++
Sbjct: 433 NMYANMGKWEGVSEVRKLMKDRGVM 457
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 136/302 (45%), Gaps = 20/302 (6%)
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV----YSWNVLI 218
GD A LF +PN ++ +N+++ Y + VF +M N+ +++ L+
Sbjct: 36 GDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLV 95
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
++ DV + + +V+ A S+ A+ + + V+ E
Sbjct: 96 KACVSLSSLEQVFTLSMKLGNSSDV----YFVSSVINAFSKHSAIHLAR--QVFDEC--S 147
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
N+ +L+ Y CG++ A DVF+ + R+ S++ M++G +G ++ + LF +
Sbjct: 148 NRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRNGFFSEGVQLFRE 207
Query: 339 MKNSRE-----QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+K + + +G V +L+ACT +G +G + S V+ + +E + D
Sbjct: 208 LKKKDKGCACLKFNGALLVSVLNACTMVGAFEEG-KWIHSYVEENGLEYDLELGTALIDF 266
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK-NPAN 452
+ G + A KMP++ D W++++ + N ++A F+ + ++ PK N
Sbjct: 267 YMKCGWVKGAEKVFNKMPVK-DVATWSAMILGLAINGNNKMALELFEKMEKVGPKPNEVT 325
Query: 453 FV 454
FV
Sbjct: 326 FV 327
>Medtr3g096440.1 | PPR containing plant-like protein | HC |
chr3:44085648-44087691 | 20130731
Length = 580
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/551 (33%), Positives = 275/551 (49%), Gaps = 79/551 (14%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSA------------------ 99
++ +C A +++ G+ +H K + +FL LI++YS
Sbjct: 17 LISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLPNKT 76
Query: 100 -------------KGSVGDAYKVFGEMPERNVVVWTAMISA------------YISCGDV 134
KG AYK+F EMP+RN+V + ++IS +
Sbjct: 77 TRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQN 136
Query: 135 GSGRRLLD-----------------------------LAPERDVVMWSIVISGYIESGDM 165
G G +LD + ++++ + +I Y + G+
Sbjct: 137 GVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEP 196
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
S+ LF M +D +SW +++ Y + + KVF EMP + SW LI G+ +NG
Sbjct: 197 NSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNG 256
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH---VYAESIGYKGNM 282
R +ALE F QM+ EG V+P T V+VL AC+ + GK VH + S N+
Sbjct: 257 RCYEALEVFHQMIKEG-VLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNV 315
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+V NAL+DMYAKCG ++SA ++F + +D++SWNT+I G A +G D+L++FD+M
Sbjct: 316 YVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIE 375
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
S +P+ VTF+G+LSAC H GLV G SM Y + P+ HY + DLLGR L+
Sbjct: 376 SNIEPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLE 435
Query: 402 QAVSFVRKMPMEPDAVI--WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+A+ + K+P E I W ++LG CR H N+E+A A + L LEP+N +VMLSNI
Sbjct: 436 EAMCLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNI 495
Query: 460 YKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
Y GRW D R++ M++ G +K P S IE +S EF + D+ HP+ I A L
Sbjct: 496 YAASGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIGEIREANSKL 555
Query: 520 TMLLRLHGYVP 530
+ GY P
Sbjct: 556 VQHMMDVGYQP 566
Score = 157 bits (396), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 175/378 (46%), Gaps = 57/378 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVVRS 61
A K+FD+MP+ N ++N++ +G + E H++ V F EM N L+ FTL +V +
Sbjct: 95 QAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFREMQNGVGGLMLDEFTLVSLVSN 154
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CS V+ QVH VA GF+ N L ALI+ Y G ++ +F M E++ V W
Sbjct: 155 CSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSSFCLFRSMVEKDAVSW 214
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
T+M+ Y + ++ + P + V W+ +ISG++++G A E+F +M V+
Sbjct: 215 TSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCYEALEVFHQMIKEGVL 274
Query: 182 S------------------------------------------WNTLLNGYANSGDVGSF 199
+N L++ YA GD+ S
Sbjct: 275 PRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFNALMDMYAKCGDMKSA 334
Query: 200 EKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
E +FE M ++V SWN LI G+A+NGR D+L F +M +E ++ PN T + VL AC+
Sbjct: 335 ENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRM-IESNIEPNHVTFLGVLSACN 393
Query: 259 RLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR------ 311
G ++ G + + G K LID+ + +E A+ CL +
Sbjct: 394 HAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAM----CLIEKVPNEIS 449
Query: 312 -DIISWNTMINGLAMHGN 328
I W ++ G +HGN
Sbjct: 450 NHIAMWGAVLGGCRVHGN 467
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 174/377 (46%), Gaps = 40/377 (10%)
Query: 121 WTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
++++IS +S + G+ +L+ A + + + +I Y + G S + FD +P
Sbjct: 14 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 73
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
N+ +WNTLL+ Y+ G K+F+EMP+RN+ S+N LI G R+ +A++ F++
Sbjct: 74 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 133
Query: 237 MLVE-GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M G ++ ++FTLV+++ CS L + + VH A +G++ N+ + NALID Y KC
Sbjct: 134 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 193
Query: 296 GV-------------------------------IESAVDVFNCLDRRDIISWNTMINGLA 324
G I+ A VFN + + +SW +I+G
Sbjct: 194 GEPNSSFCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFV 253
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI--IP 382
+G +AL +F QM P TFV +L AC L+ G ++ S +
Sbjct: 254 KNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLF 313
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+ + + D+ + G + A + M D V W +L+ + E + F +
Sbjct: 314 NVYVFNALMDMYAKCGDMKSAENLFEMMIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRM 373
Query: 443 IE--LEPKNPANFVMLS 457
IE +EP + +LS
Sbjct: 374 IESNIEPNHVTFLGVLS 390
>Medtr5g088310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:38310385-38313323 | 20130731
Length = 684
Score = 298 bits (763), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 177/542 (32%), Positives = 277/542 (51%), Gaps = 14/542 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A+ V TW ++ +G ++ F M R P N FT P V +
Sbjct: 58 LNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQP-NDFTFPCVFK 116
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ + G+Q+H +A K G ++ F+ + +MY G GDA +F EMP+RN+
Sbjct: 117 ASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACNMFDEMPQRNLAT 176
Query: 121 WTAMISAYI----SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W A IS + S + + + L + E + + + ++ ++ + R+L +
Sbjct: 177 WNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIV 236
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDAL 231
DV N L++ Y GD+ S E VF + R NV SW ++ +N A
Sbjct: 237 RCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERAC 296
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F Q +V P DF + +VL AC+ LG L++G+ VH A + N+FVG+AL+DM
Sbjct: 297 MVFLQ--ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDM 354
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE--QPDGV 349
Y KCG IE+A VF+ L R++++WN MI G A G+ AL LF++M +P V
Sbjct: 355 YGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYV 414
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T + ILS C+ +G V G F+SM +Y I P EH+ C+ DLLGR+GL+D+A F++
Sbjct: 415 TLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQN 474
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
M ++P +W +LLGACR H E+ ++A + L EL+ + N V+LSN+ GRW++
Sbjct: 475 MAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEA 534
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
++ M+D G +K G S I + + F + D H I L L ++ GYV
Sbjct: 535 TVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYV 594
Query: 530 PN 531
P+
Sbjct: 595 PD 596
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 7/303 (2%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N L+N Y+ + S + V R V +W LI G N RF AL F M + +V
Sbjct: 46 NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRD-NV 104
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PNDFT V A + + GK +H A G ++FVG + DMY K G A +
Sbjct: 105 QPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGFRGDACN 164
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F+ + +R++ +WN I+ + DA+ F + +P+ +TF L+AC M
Sbjct: 165 MFDEMPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVR 224
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ G + + + + D G+ G + A ++ + V W S+L
Sbjct: 225 LNLG-RQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSML 283
Query: 424 GACRTHKNVEIAELAF-QHLIELEPKNPANFVMLSNIYK----DLGRWQDVARLKIAMRD 478
A + E A + F Q E+EP + +LS + +LGR +K + D
Sbjct: 284 AALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVED 343
Query: 479 TGF 481
F
Sbjct: 344 NIF 346
>Medtr1g040535.1 | pentatricopeptide (PPR) repeat protein | LC |
chr1:15006779-15004629 | 20130731
Length = 675
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 196/633 (30%), Positives = 301/633 (47%), Gaps = 127/633 (20%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTL----- 55
M A KV+++M + TWNAM GYS D + LF +M R L+ T
Sbjct: 1 MEDASKVYERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKM-REEIIELDVVTWSSVIS 59
Query: 56 ------------------------PIVVR------SCSKAGAVREGEQVHCVAAKRGFKW 85
P VV+ +C+ GA+ G++ HC + K K
Sbjct: 60 GYAQRGFGCEAMDVFRKMCGCRCRPNVVKLMSLLSACASVGALLHGKETHCYSVKFILKG 119
Query: 86 NS-------FLCTALIEMYSAKGSVGDAYKVFGEM--PERNVVVWTAMISAYISCGDVGS 136
+ ALI+MY+ S+ A +F E+ +R+VV WT MI Y GD
Sbjct: 120 EHNDDNDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQYGDANH 179
Query: 137 GRRLLD--------LAPE----------------------------RDVVMWSIV----- 155
+L + P R +++S V
Sbjct: 180 ALQLFSEMFKFDNCIVPNDFTISCVLMSCARLSALIFGKHIHAYVLRRSLIYSDVLFVAN 239
Query: 156 --ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER---- 209
I Y +SGD+ +A+ +FD M R+ +SW +LL GY G +VF+EM +
Sbjct: 240 CLIDMYSKSGDVDTAQVVFDSMSKRNAISWTSLLTGYGMHGCSEDAFRVFDEMRKEALSF 299
Query: 210 -NVYSWNVLIGGYARNGRFSDALEAFKQML-VEGDVVPNDFTLVAVLLACSRLGALDMGK 267
N SWN + G A + AL+ F +M ++ +VPNDFT+ VL++C+RL AL GK
Sbjct: 300 GNGGSWNRFVXGDANH-----ALQLFSEMFKIDNCIVPNDFTISCVLMSCARLSALKFGK 354
Query: 268 WVHVYAESIGYKGN--MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
+H + + + +FV N LIDMY+K G +++A VF+ + +R+ +SW +++ G M
Sbjct: 355 QIHAHVLRRSHSNSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGM 414
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
HG + DA +FD+M+ DG+TF+ +L AC +
Sbjct: 415 HGRSEDAFRVFDEMRKEALVLDGITFLVVLYAC--------------------------K 448
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
HY CM DLLGRAG L +A+ + MP+EP V+W +LL ACR H N E+AE A + L+EL
Sbjct: 449 HYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLEL 508
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
+ N + +LSNIY + RW+DVAR+ M+ TG +K+PG S ++ + FY D
Sbjct: 509 KADNDGTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRT 568
Query: 506 HPETESIYRALRGLTMLLRLHGYVPNLVDVAQG 538
H +++ IY L L ++ + + ++ D +G
Sbjct: 569 HLQSQKIYETLADLIKRIKANFSLHDVDDEEKG 601
>Medtr0011s0300.1 | PPR containing plant-like protein | HC |
scaffold0011:236494-238095 | 20130731
Length = 533
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/455 (35%), Positives = 255/455 (56%), Gaps = 29/455 (6%)
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV-----------WTAMISAYISCGDV 134
N+F+ +I Y S A + M + + V TA+I+A C
Sbjct: 71 NTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIAVNNYTFPPLIKSCTALIAASSKC--- 127
Query: 135 GSGRRLLDLAPERDVVMWSI-----VISGYIES----GDMVSARELFDKMPNRDVMSWNT 185
+ ++ VV++ + V+SG+IE G++ AR LFD+ +DV+ W
Sbjct: 128 -ASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQTGRKDVVLWTA 186
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+++GY GDV S ++F+EMPERNV SW+ ++ Y+R F + L+ F +M EG V P
Sbjct: 187 MIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLFLEMQSEG-VRP 245
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIG-YKGNMFVGNALIDMYAKCGVIESAVDV 304
ND LV VL AC+ LGAL G WVH YA N + AL+DMY+KCG +ESA+ V
Sbjct: 246 NDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSKCGCVESALSV 305
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + +D+ +WN MI+G+A++G+ +L LF QM +P+ TFV +L+ACTH +V
Sbjct: 306 FDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGNKPNETTFVAVLTACTHARMV 365
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV-RKMP--MEPDAVIWTS 421
R+G F+ M Y + P EHY C+ DLL R+G++++A F+ KM DA +W +
Sbjct: 366 REGLRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEAERFIEEKMGGFAAGDANVWGA 425
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
+L ACR +KN+ + ++ LI++ + V+ NIY++ G + R++ + + G
Sbjct: 426 ILNACRIYKNINVGNRVWKKLIDMGVADCGTHVLTYNIYREAGWDAEANRVRSMISEAGM 485
Query: 482 RKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+K PGCS+IE + V EF + D+ HP+ + + R L
Sbjct: 486 KKKPGCSIIEVGNEVEEFLAGDQSHPQAQEMCRLL 520
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 57/352 (16%)
Query: 3 HARKVFDKMPEPNTATW--NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+AR +F + N T+ N M Y S V + M + A +N++T P +++
Sbjct: 57 YARSIFHNLTHRNRNTFIHNTMIRAYLQNHSPTHAVSCYTTMLQNGIA-VNNYTFPPLIK 115
Query: 61 SCSK--------AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
SC+ A +V G VHC G ++++ + IE YSA G + A +F +
Sbjct: 116 SCTALIAASSKCASSVMIGCLVHCHVVLFGLTNDAYVVSGFIEFYSALGELRKARVLFDQ 175
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
++VV+WTAMI Y GDV S R + D PER+VV WS +++ Y + +LF
Sbjct: 176 TGRKDVVLWTAMIDGYGKIGDVESAREMFDEMPERNVVSWSAMMAAYSRVSEFREVLDLF 235
Query: 173 DKM------PNRDVMS----------------W------------------NTLLNGYAN 192
+M PN V+ W L++ Y+
Sbjct: 236 LEMQSEGVRPNDSVLVTVLTACAHLGALTQGMWVHSYARRFDRVSSNPILATALVDMYSK 295
Query: 193 SGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVA 252
G V S VF+ + +++V +WN +I G A NG +LE F+QM+V G+ PN+ T VA
Sbjct: 296 CGCVESALSVFDGISDKDVGAWNAMISGVALNGDARKSLELFQQMIVCGN-KPNETTFVA 354
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN---ALIDMYAKCGVIESA 301
VL AC+ + G + ++ E G G ++D+ ++ G++E A
Sbjct: 355 VLTACTHARMVREG--LRLFEEMSGTYGVEPCAEHYACVVDLLSRSGMVEEA 404
>Medtr1g114220.1 | PPR containing plant-like protein | HC |
chr1:51543346-51541694 | 20130731
Length = 550
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/527 (31%), Positives = 275/527 (52%), Gaps = 68/527 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
++ +VF ++ P +WN + GYS +++ + +F +M R AP ++ T P +V++
Sbjct: 66 YSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAP-DYLTYPFLVKAS 124
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ + G VH K G + + F +
Sbjct: 125 ARLSKQKSGVSVHAQIIKTGHESDRF-------------------------------IQN 153
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
++I Y SCG++ MW A ++F+ M ++++S
Sbjct: 154 SLIHMYASCGNI----------------MW---------------AHKVFESMQGKNLVS 182
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN++L+GYA G++ +KVFE M ER+V SW+ I GY + G + +A+ F++M G
Sbjct: 183 WNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKMRAVGP 242
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
N+ T+V+VL AC+ LGAL G+ +H Y M + +L+DMYAKCG IE A+
Sbjct: 243 KA-NEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEAL 301
Query: 303 DVFNCLDRR--DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
VF + + D+ WN MI GLA HG ++L LF +M+ + + D +T++ +L+AC H
Sbjct: 302 FVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGIRSDEITYLCLLAACAH 361
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
GLV++ + +F+S+V + P EHY CM D+L RAG L A F+ ++P+EP A +
Sbjct: 362 GGLVKEAWNFFESLVKR-GMTPTSEHYACMVDVLARAGQLTTAYQFICQIPIEPTASMLG 420
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
++ C H+N ++AE + LIEL+P N ++ LSN+Y + RW D ++ AM G
Sbjct: 421 AIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVKRWDDSKSMREAMERRG 480
Query: 481 FRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+K PG S +E ++ F + D+ HP+++ Y L + ++ HG
Sbjct: 481 VKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMK-HG 526
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 150/309 (48%), Gaps = 19/309 (6%)
Query: 143 LAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
L+ E + + S SGD+ + +F ++ + + SWN ++ GY+NS + +
Sbjct: 42 LSHEYSFIFKILSFSALSNSGDIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSI 101
Query: 203 FEEMPERNV----YSWNVLIGGYARNGRFSDALEAFKQMLVEGD----VVPNDFTLVAVL 254
F +M V ++ L+ AR + + Q++ G + N +L+ +
Sbjct: 102 FLKMLRHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQN--SLIHMY 159
Query: 255 LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDII 314
+C + W H ES+ K N+ N+++D YAKCG + A VF + RD+
Sbjct: 160 ASCGNI------MWAHKVFESMQGK-NLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVR 212
Query: 315 SWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM 374
SW++ I+G G +A+++F++M+ + + VT V +LSAC H+G ++ G + Q +
Sbjct: 213 SWSSFIDGYVKAGEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYI 272
Query: 375 VDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM-EPDAVIWTSLLGACRTHKNVE 433
+D+ + + + D+ + G +++A+ R + + D IW +++G TH VE
Sbjct: 273 IDNLLPMTMVLQTS-LVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 331
Query: 434 IAELAFQHL 442
+ F+ +
Sbjct: 332 ESLKLFKEM 340
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 121/287 (42%), Gaps = 49/287 (17%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+KVF+ M E + +W++ +GY +R+ + +F +M RA N T+ V+
Sbjct: 196 MAMAQKVFESMQERDVRSWSSFIDGYVKAGEYREAMAVFEKM-RAVGPKANEVTMVSVLS 254
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ GA+++G +H L T+L++MY+ G++ +A VF + +
Sbjct: 255 ACAHLGALQKGRMMHQYIIDNLLPMTMVLQTSLVDMYAKCGAIEEALFVFRGISK----- 309
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP---- 176
+ DV +W+ +I G G + + +LF +M
Sbjct: 310 ------------------------SQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAGI 345
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVY----SWNVLIGGYARNGRFSDALE 232
D +++ LL A+ G V FE + +R + + ++ AR G+ + A +
Sbjct: 346 RSDEITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAYQ 405
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK 279
Q+ +E P L A+ C D+ AE++G K
Sbjct: 406 FICQIPIE----PTASMLGAIFSGCINHRNFDL-------AETVGRK 441
>Medtr3g026690.1 | PPR containing plant-like protein | HC |
chr3:8195048-8190900 | 20130731
Length = 944
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/505 (33%), Positives = 270/505 (53%), Gaps = 33/505 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR++F + + W+A + T R+V+ +F M P + L I+V C+
Sbjct: 353 ARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKP-DKAILSILVSGCT 411
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G+ +HC A K + + + T L+ MY A +F M +++VVW
Sbjct: 412 EISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNT 471
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWS-IVISGYI-ESGDMV---SARELFDKMP-- 176
+I+ + GD P + M++ + +SG + +SG MV SA + D +
Sbjct: 472 LINGFTKYGD-----------PHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLG 520
Query: 177 ------------NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYAR 223
D+ L++ YA G + S E++F ++ SWNV+I GY
Sbjct: 521 TCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLH 580
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
NG ++A+ F++M +E +V PN T V +L A S L L H +G+
Sbjct: 581 NGYSNEAISTFRRMKLE-NVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTL 639
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+GN+LIDMYAKCG + + F+ ++ +D ISWN M++ AMHG A++LF M+ S
Sbjct: 640 IGNSLIDMYAKCGQLRYSEKCFHEMENKDTISWNAMLSAYAMHGQGELAVALFSVMQESN 699
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
+ D V+++ +LSAC H GL+++G+ F SM + + + P +EHY CM DLLG AGL D+
Sbjct: 700 VRVDSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEV 759
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+S + KM EPDA +W +LL AC+ H NV + E+A HL++LEP+NP + V+LS+IY
Sbjct: 760 LSLLNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQC 819
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCS 488
GRW D R + + + G +K+PG S
Sbjct: 820 GRWNDARRTRSHINNHGLKKIPGYS 844
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 208/445 (46%), Gaps = 18/445 (4%)
Query: 8 FDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
F ++ P+ +N+ YS + L+ + + P + FT V+++C+ A
Sbjct: 56 FLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKP-DKFTFNFVLKACTSALD 114
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
EG ++ G + + ++ T+LI+M+ G + +A VF +MP ++ V W AMIS
Sbjct: 115 FHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISG 174
Query: 128 YIS----CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV--M 181
C + R+ E D V + GD+ + + + R + +
Sbjct: 175 LSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGV 234
Query: 182 SWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
N+L++ Y GDV S ++VF+ M R+ SW ++ GY +NG + + L+ +M G
Sbjct: 235 VSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMR-RG 293
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
+V N +V LL + + L+ GK ++ YA +G ++ V ++ MYAKCG ++ A
Sbjct: 294 NVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKA 353
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
++F L+ RD+++W+ ++ L G + LS+F M+ +PD ++S CT +
Sbjct: 354 RELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEI 413
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG----RAGLLDQAVSFVRKMPMEPDAV 417
+ G ++ Y+I +E M L R L A++ +M ++ D V
Sbjct: 414 SNIGLG-----KIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIK-DIV 467
Query: 418 IWTSLLGACRTHKNVEIAELAFQHL 442
+W +L+ + + +A F L
Sbjct: 468 VWNTLINGFTKYGDPHLALEMFNRL 492
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 231/553 (41%), Gaps = 114/553 (20%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR VFDKMP + WNAM +G S + + + + +F M + ++ ++ +
Sbjct: 150 LDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRM-QMEGFEVDKVSILNLAP 208
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S+ G V + +H +R + +LI+MY G V A +VF M R+ V
Sbjct: 209 AVSRLGDVGCCKSIHGYVVRRSI--CGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVS 266
Query: 121 WTAMISAYISCG-----------------------------------DVGSGRRLLDLAP 145
W M++ Y+ G D+ G+ + + A
Sbjct: 267 WATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYAL 326
Query: 146 E----RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEK 201
+ D+V+ + ++ Y + G++ ARELF + RD+++W+ L+ +G
Sbjct: 327 QMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLS 386
Query: 202 VFEEM------PERNVYSWNV---------------------------------LIGGYA 222
+F+ M P++ + S V L+ Y
Sbjct: 387 IFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYI 446
Query: 223 RNGRFSDALEAFKQMLVE---------------GD---------------VVPNDFTLVA 252
R F+ A+ F +M ++ GD ++P+ T+V
Sbjct: 447 RFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVG 506
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR-R 311
+ AC+ + LD+G +H E G++ ++ V AL+DMYAKCG + S +F +
Sbjct: 507 LFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVK 566
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF 371
D +SWN MI G +G + +A+S F +MK +P+ VTFV IL A +++ ++R+ + F
Sbjct: 567 DEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREA-MAF 625
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
+ + + + D+ + G L + +M D + W ++L A H
Sbjct: 626 HTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEME-NKDTISWNAMLSAYAMHGQ 684
Query: 432 VEIAELAFQHLIE 444
E+A F + E
Sbjct: 685 GELAVALFSVMQE 697
>Medtr2g021710.1 | PPR containing plant-like protein | HC |
chr2:7399056-7396074 | 20130731
Length = 727
Score = 296 bits (758), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 274/562 (48%), Gaps = 82/562 (14%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FD MP ++ M G+ R+ + +F +M P N TL V+ +C
Sbjct: 137 NARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVP-NDLTLVNVISAC 195
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN----- 117
S G V VH + K + T L+ Y V +A ++F EMPERN
Sbjct: 196 SHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNLVTWN 255
Query: 118 --------------------------VVVWTAMISAYISCGDVGSG----RRLLDLAPER 147
V+ W MI YI G + R +L
Sbjct: 256 VMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQTGHGP 315
Query: 148 DVVM-----------------WSI------------------VISGYIESGDMVSARELF 172
+ VM W + +I Y G M A F
Sbjct: 316 NEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGMMDLACLQF 375
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + SWN L G+ +G + K F++M R+V+SW+ +I GYA++ ALE
Sbjct: 376 EVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALE 435
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY--AESIGYKGNMFVGNALID 290
F +ML G + PN+ T+V+V A + LG L GK H Y +ESI + N+ ALID
Sbjct: 436 LFHKMLA-GGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLRA--ALID 492
Query: 291 MYAKCGVIESAVDVFNCLDRRDIIS----WNTMINGLAMHGNTADALSLFDQMKNSREQP 346
MYAKCG I SA+ FN + RD +S WN +I GLA HG+ + L +F M+ +P
Sbjct: 493 MYAKCGSINSALQFFNQI--RDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFHIKP 550
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+ +TF+G+LSAC H GLV G F++M Y++ P I+HYGCM D+LGRAGLL++A
Sbjct: 551 NPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEM 610
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+R MPME D VIW +LL ACRTH NV I E A ++L L P + V+LSNIY + G+W
Sbjct: 611 IRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANAGKW 670
Query: 467 QDVARLKIAMRDTGFRKLPGCS 488
++V+ ++ M+ + PG S
Sbjct: 671 EEVSFVRSVMQGQTMDREPGYS 692
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 209/499 (41%), Gaps = 105/499 (21%)
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++SCS + +G Q+H + K G +N+F+ +LI MY+ G + +A +F +
Sbjct: 60 LKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDS 119
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM--- 175
V M+S Y+ G + + R+L D+ P + V ++ +I G++++G A E+F M
Sbjct: 120 VSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSC 179
Query: 176 ---PNR----DVMSW-----------------------------NTLLNGYANSGDVGSF 199
PN +V+S L++ Y V
Sbjct: 180 GVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREA 239
Query: 200 EKVFEEMPERNVYSWNVLIGGYARN-------------------------------GRFS 228
++F+EMPERN+ +WNV++ GYA+ GR
Sbjct: 240 RRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLR 299
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+ALE ++ ML G PN+ +V ++ AC R A+ G +H G+ F+ +
Sbjct: 300 EALEIYRAMLQTGH-GPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTI 358
Query: 289 IDMYAKC-------------------------------GVIESAVDVFNCLDRRDIISWN 317
I YA C G+++ A+ F+ + RD+ SW+
Sbjct: 359 IYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWS 418
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
TMI+G A + AL LF +M +P+ VT V + SA +G +++G L + M
Sbjct: 419 TMISGYAQSEHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSE 478
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI-WTSLLGACRTHKNVEIAE 436
SI + D+ + G ++ A+ F ++ E +V W +++ +H + +
Sbjct: 479 -SIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCL 537
Query: 437 LAFQHLIELEPK-NPANFV 454
F + K NP F+
Sbjct: 538 EVFSDMQRFHIKPNPITFI 556
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 190/416 (45%), Gaps = 73/416 (17%)
Query: 123 AMISAYISCGD---VGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
A++SA SC + GR++ L + + + +I+ Y + GD+ +A+ LFD
Sbjct: 55 ALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGF 114
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D +S N +++GY +G + + K+F+ MP + S+ +I G+ +NG F +ALE FK
Sbjct: 115 ATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFK 174
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV--------------------HVYAES 275
M G VVPND TLV V+ ACS LG + + V H Y
Sbjct: 175 DMRSCG-VVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLC 233
Query: 276 IGYKG-----------NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
G + N+ N +++ YAK G+++ A ++F+ + +D+ISW TMI+G
Sbjct: 234 SGVREARRLFDEMPERNLVTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYI 293
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDGF----- 368
G +AL ++ M + P+ V V ++SAC H +V+ GF
Sbjct: 294 QKGRLREALEIYRAMLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNF 353
Query: 369 -----LYFQS---MVD------HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
+YF + M+D + +E + + + G++D A+ KM +
Sbjct: 354 IQTTIIYFYAACGMMDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVR- 412
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGRWQD 468
D W++++ ++ ++A F ++ ++P N V + + LG Q+
Sbjct: 413 DVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKP-NEVTMVSVFSAIATLGTLQE 467
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 109/239 (45%), Gaps = 17/239 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M HA K FDKM + +W+ M +GY+ +E + + LF +M P N T+ V
Sbjct: 399 MDHALKTFDKMHVRDVFSWSTMISGYAQSEHPKMALELFHKMLAGGIKP-NEVTMVSVFS 457
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER--NV 118
+ + G ++EG+ H +N L ALI+MY+ GS+ A + F ++ + +V
Sbjct: 458 AIATLGTLQEGKLAHEYMRSESIPFNDNLRAALIDMYAKCGSINSALQFFNQIRDEVSSV 517
Query: 119 VVWTAMISAYIS------CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
W A+I S C +V S + + P + + + V+S +G + S + +F
Sbjct: 518 SPWNAIICGLASHGHASMCLEVFSDMQRFHIKP--NPITFIGVLSACCHAGLVESGKRIF 575
Query: 173 DKMPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNG 225
M + D+ + +++ +G + E++ MP E ++ W L+ +G
Sbjct: 576 KTMKSAYNVEPDIKHYGCMIDILGRAGLLEEAEEMIRSMPMEADIVIWGTLLAACRTHG 634
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 116/271 (42%), Gaps = 46/271 (16%)
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
++ LV+ L +CS L + G+ +H +G N F+ N+LI+MYAKCG I++A +F
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS------------------REQ-- 345
+ D +S N M++G +G +A LFD M N RE
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 346 -----------PDGVTFVGILSACTHMGLVRD-----GFLYFQSMVDHYSIIPQIEHYGC 389
P+ +T V ++SAC+H+G V + G + +V + + H C
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYC 231
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKN 449
+ + +A +MP E + V W +L V+ A F + + K+
Sbjct: 232 LCS------GVREARRLFDEMP-ERNLVTWNVMLNGYAKTGLVDEARELFDGICD---KD 281
Query: 450 PANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
++ + + Y GR ++ + AM TG
Sbjct: 282 VISWGTMIDGYIQKGRLREALEIYRAMLQTG 312
>Medtr3g084440.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:38114703-38117150 | 20130731
Length = 616
Score = 296 bits (757), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 163/508 (32%), Positives = 270/508 (53%), Gaps = 45/508 (8%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA--- 127
+++H K G + LI+ Y G + DA K+F +P+++ V W ++SA
Sbjct: 27 AKKLHAQIIKSGLNHHHPFPKTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNL 86
Query: 128 -----------------------------YISCGDVGS----------GRRLLDLAPERD 148
+C ++GS R LL E D
Sbjct: 87 SNLPHKAFSISLPILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDD 146
Query: 149 VVMWSIV-ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
VV S+V + E D R +FD + +SW +++GYA SG ++F E P
Sbjct: 147 VVKSSLVDMYAKFELPDY--GRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESP 204
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
+N+Y+W LI G ++G +DAL F +M EG + + L +V+ AC+ ++GK
Sbjct: 205 FKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGK 264
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
VH ++GY+ +F+ NAL+DMYAKC + +A +F + R+D++SW ++I G A HG
Sbjct: 265 QVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWTSIIVGTAQHG 324
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
+AL+L+D M + +P+ VTFVG++ AC+H+GLV G F+SMV+ + I P ++HY
Sbjct: 325 LAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHY 384
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
C+ DL R+G LD+A + +R MP++PD W +LL AC+ H N ++A HL++L+P
Sbjct: 385 TCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKP 444
Query: 448 KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
++P+++++LSNIY G W++V+ ++ M +K+PG S ++ F++ + P
Sbjct: 445 EDPSSYILLSNIYAGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQP 504
Query: 508 ETESIYRALRGLTMLLRLHGYVPNLVDV 535
+ I + L +R GYVP+ V
Sbjct: 505 MKDEILGLMTKLDSEMRRRGYVPDTSSV 532
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 112/255 (43%), Gaps = 15/255 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F + P N W A+ +G + + D + LF EM R + + L VV +C+
Sbjct: 196 ALELFRESPFKNLYAWTALISGLVQSGNANDALYLFVEMRREGVSIADPLVLSSVVGACA 255
Query: 64 KAGAVRE-GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ AVRE G+QVHCV G++ F+ AL++MY+ V A +F EM ++VV WT
Sbjct: 256 NS-AVRELGKQVHCVVITLGYESCLFISNALVDMYAKCSDVVAAKYIFCEMRRKDVVSWT 314
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES----GDMVSARELFDKMPNR 178
++I G L D V + G I + G + R LF M
Sbjct: 315 SIIVGTAQHGLAEEALTLYDDMVLAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVED 374
Query: 179 -----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFSDALE 232
+ + LL+ ++ SG + E + MP + + +W L+ +G A+
Sbjct: 375 FGIRPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVR 434
Query: 233 AFKQMLVEGDVVPND 247
+L D+ P D
Sbjct: 435 IADHLL---DLKPED 446
>Medtr1g059720.1 | organelle transcript processing protein, putative
| HC | chr1:25973337-25971195 | 20130731
Length = 574
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 162/473 (34%), Positives = 255/473 (53%), Gaps = 10/473 (2%)
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
QVH A G N + L+ Y ++ DAY +F EMP R+ W+ M+ + G
Sbjct: 21 QVHANALINGTFNNLIVANKLLHFYVQHKAINDAYYLFDEMPTRDPTTWSIMVGGFSKLG 80
Query: 133 DV----GSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DVMSWN 184
D + R +L D VI + D+ R + D + D
Sbjct: 81 DYNNCYATFREILRCNITPDNYTLPFVIRACRDRKDIQMGRMIHDVVLKYGLVLDHFVCA 140
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
TL++ YA + K+F+ M +++ +W V+IG YA + ++L F ++ EG V
Sbjct: 141 TLVDMYAKCAVIEDARKLFDVMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRLREEG-FV 198
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
+ +V V+ AC++LGA+ ++V+ Y G ++ +G A+IDMYAKCG ++SA +V
Sbjct: 199 SDKVAMVTVVNACAKLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREV 258
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + +++ISW+ MI HG +AL LF M + P+ +TFV +L AC+H GL
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGKGKEALDLFHMMLSCGISPNRITFVSLLYACSHSGLT 318
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+G +F SM Y + P ++HY C+ DLLGRAG LD+A+ + M +E D +W++LLG
Sbjct: 319 DEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMNVEKDERLWSALLG 378
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
ACR H N+E+A + L+EL+PKNP +V+LSNIY G+W+ V + M +K+
Sbjct: 379 ACRVHGNMELAGKVAESLLELQPKNPGIYVLLSNIYAKAGKWEKVGEFRDLMTQRKLKKV 438
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDVAQ 537
PG + IE ++ +F D HP+++ IY L + L + GYVP+ V Q
Sbjct: 439 PGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLTSVIKKLEMVGYVPDTEFVLQ 491
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 164/337 (48%), Gaps = 17/337 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +FD+MP + TW+ M G+S + + F E+ R P N +TLP V+R+C
Sbjct: 54 AYYLFDEMPTRDPTTWSIMVGGFSKLGDYNNCYATFREILRCNITPDN-YTLPFVIRACR 112
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ G +H V K G + F+C L++MY+ + DA K+F M +++V WT
Sbjct: 113 DRKDIQMGRMIHDVVLKYGLVLDHFVCATLVDMYAKCAVIEDARKLFDVMVSKDLVTWTV 172
Query: 124 MISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
MI Y D L D E D V V++ + G M AR + + +
Sbjct: 173 MIGCYAD-YDAYESLVLFDRLREEGFVSDKVAMVTVVNACAKLGAMHRARFVNEYICGNG 231
Query: 179 ---DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
DV+ +++ YA G V S +VF+ M E+NV SW+ +I Y +G+ +AL+ F
Sbjct: 232 LSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSAMIAAYGYHGKGKEALDLFH 291
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA---ESIGYKGNMFVGNALIDMY 292
ML G + PN T V++L ACS G D G +H + G + ++ ++D+
Sbjct: 292 MMLSCG-ISPNRITFVSLLYACSHSGLTDEG--LHFFDSMWRDYGVRPDVKHYTCVVDLL 348
Query: 293 AKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+ G ++ A+ + ++ +D W+ ++ +HGN
Sbjct: 349 GRAGRLDEALKLIETMNVEKDERLWSALLGACRVHGN 385
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 41/316 (12%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD M + TW M Y+ +++ + +VLF + R + + VV +C+
Sbjct: 155 ARKLFDVMVSKDLVTWTVMIGCYADYDAY-ESLVLFDRL-REEGFVSDKVAMVTVVNACA 212
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K GA+ V+ G + L TA+I+MY+ G V A +VF M E+NV+ W+A
Sbjct: 213 KLGAMHRARFVNEYICGNGLSLDVILGTAMIDMYAKCGCVDSAREVFDRMKEKNVISWSA 272
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
MI+AY G G G+ LDL +M S IS PNR +++
Sbjct: 273 MIAAY---GYHGKGKEALDLFH----MMLSCGIS------------------PNR--ITF 305
Query: 184 NTLLNGYANSGDVGSFEKVFEEM-----PERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+LL ++SG F+ M +V + ++ R GR +AL+ + M
Sbjct: 306 VSLLYACSHSGLTDEGLHFFDSMWRDYGVRPDVKHYTCVVDLLGRAGRLDEALKLIETMN 365
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDM-GKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
VE D + A+L AC G +++ GK E ++V L ++YAK G
Sbjct: 366 VEKD----ERLWSALLGACRVHGNMELAGKVAESLLELQPKNPGIYV--LLSNIYAKAGK 419
Query: 298 IESAVDVFNCLDRRDI 313
E + + + +R +
Sbjct: 420 WEKVGEFRDLMTQRKL 435
>Medtr7g032360.1 | PPR containing plant-like protein | HC |
chr7:11369613-11371524 | 20130731
Length = 541
Score = 295 bits (755), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 224/356 (62%), Gaps = 4/356 (1%)
Query: 148 DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
DV + + +IS ++ G +AR++FD+M RDV+SWN+++ GY +G+V +F +M
Sbjct: 163 DVFVGNSLISLFMNFGLSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMN 222
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQM-LVEGD--VVPNDFTLVAVLLACSRLGALD 264
RN+ +WN +I G + G ++LE F +M + GD V P+ T+ +VL AC+ LG++D
Sbjct: 223 GRNIITWNSIITGLVQAGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSID 282
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
GKWVH Y + ++ +G AL++MY KCG ++ A+++FN + +D +W MI+ A
Sbjct: 283 HGKWVHAYLRKNDIECDVVIGTALVNMYGKCGDVQQAIEIFNDMPEKDASAWTAMISVFA 342
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+HG A F +M+ + +P+ VTFVG+LSAC+H GLV G F M YSI PQI
Sbjct: 343 LHGFGKKAFDCFLEMEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQI 402
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
HY CM D+L RA L D+A+ +R MPM+PD +W +LLG C+ H N+++ E +LI+
Sbjct: 403 YHYACMVDILSRARLFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLID 462
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR-KLPGCSVIECNDSVVEF 499
LEP N A ++ L +IY G++ R++ +M++ G K+PGCS+IE N V EF
Sbjct: 463 LEPHNHAFYINLCDIYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEF 518
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 166/380 (43%), Gaps = 58/380 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRD------VVVLFAEMNRAAAAPLNHFTLP 56
+A VF + P +N M Y E D ++L+ +M P N+ T P
Sbjct: 74 YANNVFHMIKYPELRVYNIMIRSYGCIEGGDDSNCCYKALMLYKQMLNKGIVP-NNLTFP 132
Query: 57 IVVRSCSK---AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
+V+ CS+ G V GE +H K GF + F+ +LI ++ G +A KVF EM
Sbjct: 133 FLVKGCSRLQYGGTV--GEVIHAHVLKFGFLNDVFVGNSLISLFMNFGLSKNARKVFDEM 190
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
R+VV W +M+ Y+ G+V L R+++ W+ +I+G +++G + E+F
Sbjct: 191 FVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQAGHAKESLEIFH 250
Query: 174 KM----------PNR---------------------------------DVMSWNTLLNGY 190
+M P++ DV+ L+N Y
Sbjct: 251 EMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIECDVVIGTALVNMY 310
Query: 191 ANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTL 250
GDV ++F +MPE++ +W +I +A +G A + F +M G V PN T
Sbjct: 311 GKCGDVQQAIEIFNDMPEKDASAWTAMISVFALHGFGKKAFDCFLEMEKAG-VKPNHVTF 369
Query: 251 VAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
V +L ACS G ++ G+ V + ++ ++D+ ++ + + A+ + +
Sbjct: 370 VGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRARLFDEALFLIRSMP 429
Query: 310 RR-DIISWNTMINGLAMHGN 328
+ D+ W ++ G MHGN
Sbjct: 430 MKPDVYVWGALLGGCQMHGN 449
>Medtr3g466010.1 | PPR containing plant-like protein | HC |
chr3:27120018-27122473 | 20130731
Length = 536
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 243/409 (59%), Gaps = 9/409 (2%)
Query: 131 CGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVS-ARELFDKMPNR---DVMS 182
C ++ SG ++ D L +V + + +I Y E D+ A+ +F++ + DV++
Sbjct: 123 CFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYAKRVFEEEVDEVCSDVVT 182
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN++L G G+V EK+F+EMP+R+V SW+ +I GY +NG+ D LE F+ M +G
Sbjct: 183 WNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNGKLEDGLECFRLMREKG- 241
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ PN+ LV +L A ++LG L G++VH ES+ ++ ++ +G L+DMYAKCG IE +
Sbjct: 242 IRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGTGLVDMYAKCGCIEESR 301
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
D+F+ + RDI +W MI GLA H +AL LF + +P V FVG+L+AC+ G
Sbjct: 302 DLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREGFRPVNVIFVGVLNACSRAG 361
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
LV +G YF+ MVD Y I P++EHYGCM DL RAGL+D+AV + M +EPD V+W +L
Sbjct: 362 LVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVRLIETMTVEPDPVMWATL 421
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L AC H VE+ E LI+++P + ++V L+ IY +W DV R++ M +
Sbjct: 422 LDACEIHGFVEMGEKIGNKLIKMDPTHDGHYVQLAGIYAKSRKWDDVVRVRRLMVERVPI 481
Query: 483 KLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
K+ G S+IE D V F + D H + IY+ L + +++ G P
Sbjct: 482 KVAGWSLIEVEDRVHRFVAGDRDHDHSSDIYKMLEIIGLMVSEAGCSPK 530
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 148/325 (45%), Gaps = 49/325 (15%)
Query: 51 NHFTLPIVVRSCSKAG---AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGD-A 106
N T ++ +C+K + G QVH K G+ N F+ ALI Y V + A
Sbjct: 106 NQHTFTFLLHACTKGKDCFNIVSGVQVHDHVVKLGYTGNVFVRNALIHFYFEGFDVSEYA 165
Query: 107 YKVFGEMPER---NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESG 163
+VF E + +VV W +M++ + G+V ++ D P+RDVV WS +I GY+++G
Sbjct: 166 KRVFEEEVDEVCSDVVTWNSMLAGLVRKGEVRDAEKMFDEMPKRDVVSWSSMIMGYVQNG 225
Query: 164 DMVSARELFDKM------PNRDV-------------MSWNT------------------- 185
+ E F M PN + + W
Sbjct: 226 KLEDGLECFRLMREKGIRPNESILVTMLSASAQLGLLGWGRFVHSTIESLRFRISVAIGT 285
Query: 186 -LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
L++ YA G + +F+ M ER++++W V+I G A + R +AL F++ + EG
Sbjct: 286 GLVDMYAKCGCIEESRDLFDGMMERDIWTWTVMICGLASHDRAKEALVLFREFIREG-FR 344
Query: 245 PNDFTLVAVLLACSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P + V VL ACSR G + G+ + + + G M ++D++A+ G+I+ AV
Sbjct: 345 PVNVIFVGVLNACSRAGLVSEGRYYFKLMVDGYGISPEMEHYGCMVDLFARAGLIDEAVR 404
Query: 304 VFNCLD-RRDIISWNTMINGLAMHG 327
+ + D + W T+++ +HG
Sbjct: 405 LIETMTVEPDPVMWATLLDACEIHG 429
>Medtr3g045450.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:14788174-14785760 | 20130731
Length = 804
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/505 (32%), Positives = 278/505 (55%), Gaps = 15/505 (2%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
+KVFD+M E N +WNA+ G+S D + F M P N T+ ++ +
Sbjct: 292 KKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRP-NPVTISSMLPVLGE 350
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
G + G +VH + + G + + F+ +LI+MY+ GS A +F +M +RN+V W +M
Sbjct: 351 LGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSM 410
Query: 125 ISAYIS----CGDVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVSARELFDKM 175
++ + V R++ + V ++ V+ G++ G + AR +
Sbjct: 411 VANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNVLPACARLGFLNVGKEIHAR-IIQTG 469
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D+ N L + Y+ G + VF + ++ S+N+LI GY++ S++L F
Sbjct: 470 CATDLFLSNALTDMYSKCGHLSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFS 528
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M + G + P+ + + ++ AC+ L ++ GK +H + + ++F N+L+D+Y KC
Sbjct: 529 EMRLSG-MTPDIVSFIGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKC 587
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-NSREQPDGVTFVGI 354
G I+ A VF+ + +D+ SWNTMI G M G A++LF+ MK + + D V+++ +
Sbjct: 588 GRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAV 647
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H GL+ G YF+ M D Y+I P HY CM DLLGRAG +++A + +R + EP
Sbjct: 648 LSACSHGGLIEKGNKYFKQMQD-YNIEPTHTHYACMVDLLGRAGQIEEAANLIRGLSFEP 706
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
DA IW +LLGACR + NVE+ A +HL +L+P + +++LSN+Y + GRW + ++
Sbjct: 707 DANIWGALLGACRIYGNVELGHWAAEHLFKLKPDHCGYYILLSNMYAEAGRWDEANMVRE 766
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEF 499
M+ G +K PGCS ++ D V F
Sbjct: 767 LMKSRGAKKNPGCSWVQIGDQVHGF 791
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 144/517 (27%), Positives = 250/517 (48%), Gaps = 54/517 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL---NHFTLPIVVR 60
A VFD+M E + +WN + S H + + F EM AAP+ + T+ V+
Sbjct: 188 AMNVFDEMFERDKVSWNTVIGLCSDRGFHEESLCFFKEM--VVAAPVVRPDLVTVVSVLP 245
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C+ + V VH K G + + AL+++Y GS KVF EM ERN V
Sbjct: 246 VCADSENVVMARIVHGYVFKVGLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVS 305
Query: 121 WTAMISAY----ISCGDVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVSAREL 171
W A+I+ + +S + + R +++ + V S ++ G + G V L
Sbjct: 306 WNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVTISSMLPVLGELGLFKLGMEVHGYSL 365
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ + D+ N+L++ YA SG +F +M +RN+ SWN ++ +A+N A+
Sbjct: 366 RMGIES-DIFIGNSLIDMYAKSGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAV 424
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
E +QM G+ PN+ T VL AC+RLG L++GK +H G ++F+ NAL DM
Sbjct: 425 ELLRQMQAHGE-NPNNVTFTNVLPACARLGFLNVGKEIHARIIQTGCATDLFLSNALTDM 483
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG + A +VFN + +D +S+N +I G + N++++L+LF +M+ S PD V+F
Sbjct: 484 YSKCGHLSLARNVFN-VSIKDKVSYNILIIGYSQTTNSSESLNLFSEMRLSGMTPDIVSF 542
Query: 352 VGILSACTHMGLVRDG---------------FLYFQSMVDHYS----------IIPQIEH 386
+GI+SAC H+ ++ G S++D Y+ + +I+H
Sbjct: 543 IGIISACAHLSSIKQGKEIHGHLVRKLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQH 602
Query: 387 -----YGCMADLLGRAGLLDQAVSFVRKMP----MEPDAVIWTSLLGACRTHKNVEIAEL 437
+ M G G + A++ M +E D+V + ++L AC +E
Sbjct: 603 KDVASWNTMILGYGMRGEFETAINLFEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNK 662
Query: 438 AFQHLIE--LEPKNPANFVMLSNIYKDLGRWQDVARL 472
F+ + + +EP + ++ + ++ G+ ++ A L
Sbjct: 663 YFKQMQDYNIEPTH-THYACMVDLLGRAGQIEEAANL 698
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 132/407 (32%), Positives = 195/407 (47%), Gaps = 30/407 (7%)
Query: 9 DKMPEPNTA-TWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGA 67
+ +P TA WN + YS+ D ++ M R+ P +H T P V+++CS
Sbjct: 92 NTLPFSKTAFLWNTLIRAYSIA-GFFDGFGVYNTMVRSGVKPDDH-TYPFVLKACSDYLK 149
Query: 68 VREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA 127
+G +VH V K GF + F+ L+ Y G DA VF EM ER+ V W +I
Sbjct: 150 FDKGREVHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGL 209
Query: 128 YISCGDVGSGRRLLDLAPER---------DVVMWSIVISGYIESGDMVSAR----ELFDK 174
C D G L E D+V V+ +S ++V AR +F
Sbjct: 210 ---CSDRGFHEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKV 266
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ V N L++ Y G + +KVF+EM ERN SWN +I G++ G DAL+AF
Sbjct: 267 GLSGHVKVGNALVDVYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAF 326
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+ M+ G + PN T+ ++L LG +G VH Y+ +G + ++F+GN+LIDMYAK
Sbjct: 327 RSMINTG-MRPNPVTISSMLPVLGELGLFKLGMEVHGYSLRMGIESDIFIGNSLIDMYAK 385
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G A +FN + R+I+SWN+M+ A + + A+ L QM+ E P+ VTF +
Sbjct: 386 SGSSRVASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENPNNVTFTNV 445
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
L AC +G + G I +I GC DL L D
Sbjct: 446 LPACARLGFLNVG----------KEIHARIIQTGCATDLFLSNALTD 482
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 193/419 (46%), Gaps = 23/419 (5%)
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVF-GEMP-ERNV 118
C+ + + + Q+H + F +S + +LI Y++ + +F +P +
Sbjct: 41 CTHSQTLSQTNQLHAFSILNAFLPHSVSISASLILKYASFRHPETSLILFQNTLPFSKTA 100
Query: 119 VVWTAMISAYISCG---DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL---- 171
+W +I AY G G ++ + D + V+ + RE+
Sbjct: 101 FLWNTLIRAYSIAGFFDGFGVYNTMVRSGVKPDDHTYPFVLKACSDYLKFDKGREVHGVV 160
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F ++DV NTLL Y N G VF+EM ER+ SWN +IG + G ++L
Sbjct: 161 FKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGFHEESL 220
Query: 232 EAFKQMLVEGDVV-PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
FK+M+V VV P+ T+V+VL C+ + M + VH Y +G G++ VGNAL+D
Sbjct: 221 CFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKVGNALVD 280
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
+Y KCG E+ VF+ +D R+ +SWN +I G + G + DAL F M N+ +P+ VT
Sbjct: 281 VYGKCGSEEACKKVFDEMDERNEVSWNAVITGFSFRGLSMDALDAFRSMINTGMRPNPVT 340
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH----YGCMADLLGRAGLLDQAVSF 406
+L +GL + G V YS+ IE + D+ ++G A +
Sbjct: 341 ISSMLPVLGELGLFKLGM-----EVHGYSLRMGIESDIFIGNSLIDMYAKSGSSRVASTI 395
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
KM + + V W S++ +++ A + ++ +NP N V +N+ R
Sbjct: 396 FNKMG-DRNIVSWNSMVANFAQNRH-HFAAVELLRQMQAHGENPNN-VTFTNVLPACAR 451
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 15/336 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F+KM + N +WN+M ++ H V L +M P N+ T V+ +C+
Sbjct: 392 ASTIFNKMGDRNIVSWNSMVANFAQNRHHFAAVELLRQMQAHGENP-NNVTFTNVLPACA 450
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G + G+++H + G + FL AL +MYS G + A VF + ++ V +
Sbjct: 451 RLGFLNVGKEIHARIIQTGCATDLFLSNALTDMYSKCGHLSLARNVF-NVSIKDKVSYNI 509
Query: 124 MISAYISCGDVG------SGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE----LFD 173
+I Y + S RL + P D+V + +IS + +E L
Sbjct: 510 LIIGYSQTTNSSESLNLFSEMRLSGMTP--DIVSFIGIISACAHLSSIKQGKEIHGHLVR 567
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
K+ + + + N+LL+ Y G + KVF+ + ++V SWN +I GY G F A+
Sbjct: 568 KLFHTHLFAANSLLDLYTKCGRIDLATKVFDRIQHKDVASWNTMILGYGMRGEFETAINL 627
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F+ M +G V + + +AVL ACS G ++ G + + ++D+
Sbjct: 628 FEAMKEDGGVEYDSVSYIAVLSACSHGGLIEKGNKYFKQMQDYNIEPTHTHYACMVDLLG 687
Query: 294 KCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
+ G IE A ++ L D W ++ ++GN
Sbjct: 688 RAGQIEEAANLIRGLSFEPDANIWGALLGACRIYGN 723
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 26/303 (8%)
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+ + WN LI Y+ G F D + M+ G V P+D T VL ACS D G+
Sbjct: 98 KTAFLWNTLIRAYSIAGFF-DGFGVYNTMVRSG-VKPDDHTYPFVLKACSDYLKFDKGRE 155
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
VH +G+ ++FVGN L+ Y CG A++VF+ + RD +SWNT+I + G
Sbjct: 156 VHGVVFKVGFDKDVFVGNTLLMFYGNCGFFVDAMNVFDEMFERDKVSWNTVIGLCSDRGF 215
Query: 329 TADALSLFDQMKNSRE--QPDGVTFVGILSACTH-----MGLVRDGFLYFQSMVDHYSII 381
++L F +M + +PD VT V +L C M + G+++ + H +
Sbjct: 216 HEESLCFFKEMVVAAPVVRPDLVTVVSVLPVCADSENVVMARIVHGYVFKVGLSGHVKV- 274
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
+ D+ G+ G + +M E + V W +++ A AF+
Sbjct: 275 -----GNALVDVYGKCGSEEACKKVFDEMD-ERNEVSWNAVITGFSFRGLSMDALDAFRS 328
Query: 442 LIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGC-SVIECNDSVVE 498
+I + P NP V +S++ LG ++ K+ M G+ G S I +S+++
Sbjct: 329 MINTGMRP-NP---VTISSMLPVLG---ELGLFKLGMEVHGYSLRMGIESDIFIGNSLID 381
Query: 499 FYS 501
Y+
Sbjct: 382 MYA 384
>Medtr5g098860.1 | PPR containing plant-like protein | HC |
chr5:43289378-43292142 | 20130731
Length = 828
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 290/543 (53%), Gaps = 13/543 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +AR VFD+ NT WN M Y + + +F + + + TL V+
Sbjct: 274 MDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLT 333
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S+ ++ EQ H K + A++ MYS V + KVF +M ER+ V
Sbjct: 334 AVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVS 393
Query: 121 WTAMISAYISCG-DVGSGRRLLDLAPER---DVVMWSIVISGYIESGDMVSARELFDKMP 176
W +ISA++ G D + + ++ ++ D V + ++S ++ ++ +
Sbjct: 394 WNTIISAFVQNGFDEEALMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLI 453
Query: 177 NRDVM---SWNTLLNGYANSGDVGSFEKVFEE--MPERNVYSWNVLIGGYARNGRFSDAL 231
R + + L++ YA SG + + E +FE+ +R+ +WN +I GY +NG A+
Sbjct: 454 RRGIQFEGMESYLIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAI 513
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
KQMLV+ +V+PN TL ++L ACS +G++ + + +H ++ + N++VG +L D
Sbjct: 514 LLLKQMLVQ-NVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDT 572
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG I A +VF ++ +++ TM+ HG AL+L+D M S +PD VTF
Sbjct: 573 YSKCGAISYAENVFLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTF 632
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
V ILSAC + GLV +G F+SM + I P IEHY C+AD+LGR G + +A FV+ +
Sbjct: 633 VAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLG 692
Query: 412 MEPDAV-IWTSLLGACRTHKNVEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGRWQD 468
+ + + IW SLLG+CR H + E+ + + L+ ++ + V+LSNIY + G W+
Sbjct: 693 EDANTMEIWGSLLGSCRNHGHFELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEK 752
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
V R++ M++ G K GCS +E V F S DE+HP++ IY L LT+ ++ GY
Sbjct: 753 VDRVRKQMKEKGLHKETGCSWVEIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKYAGY 812
Query: 529 VPN 531
P
Sbjct: 813 KPQ 815
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 222/515 (43%), Gaps = 59/515 (11%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A VFD M N WN + + + V FA M + P + T + +
Sbjct: 173 YALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMP-SPVTFVNLFPAL 231
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNS--FLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SK G R + + K G ++ S F+ ++ I M+S G + A VF +N +
Sbjct: 232 SKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEI 291
Query: 121 WTAMISAYI--SCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELF-- 172
W MI AY+ +C + L E DV + S++ + + + E F
Sbjct: 292 WNTMIVAYVQNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTA--VSQLQQIKLAEQFHA 349
Query: 173 ---DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+P ++ N ++ Y+ V + KVF++M ER+ SWN +I + +NG +
Sbjct: 350 FVIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEE 409
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG--NA 287
AL +M + ++ + T A+L A S L L +GK H Y + +G F G +
Sbjct: 410 ALMLVCEMQKQKFLI-DSVTATALLSAASNLRNLYVGKQTHAY---LIRRGIQFEGMESY 465
Query: 288 LIDMYAKCGVIESAVDVF--NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
LIDMYAK G I +A +F NC RD +WN +I G +G A+ L QM
Sbjct: 466 LIDMYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVI 525
Query: 346 PDGVTFVGILSACT---HMGLVRD--GF---------LYF-QSMVDHYSIIPQIEH---- 386
P+ VT IL AC+ MGL R GF +Y S+ D YS I +
Sbjct: 526 PNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENV 585
Query: 387 -----------YGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGACRTHKNV 432
Y M G+ G+ +A++ M + PDAV + ++L AC V
Sbjct: 586 FLRTPEKNSVTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLV 645
Query: 433 EIAELAFQHLIELEPKNPA--NFVMLSNIYKDLGR 465
+ F+ + ++ P+ ++ ++++ +GR
Sbjct: 646 DEGLQIFESMEKVHKIKPSIEHYCCVADMLGRVGR 680
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 218/482 (45%), Gaps = 52/482 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM-NRAAAAPLNHFTLPIVVRSC 62
A + D +P P+T WN++ G+ ++L+A+M + ++ + + +T +++C
Sbjct: 68 ALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSNSSCSTFDPYTFSSTLKAC 127
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNS----FLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ + G+ +H + N+ + +L+ MY A A VF M RNV
Sbjct: 128 ALTKDILTGKAIHSHFLRSHSNTNTGPSRIVYNSLLNMY-ASCQHEYALNVFDVMRRRNV 186
Query: 119 VVWTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
V W +I +++ V + +++ + V + + + GD + + +
Sbjct: 187 VAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGF 246
Query: 175 MPN------RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
M DV ++ + +++ G + VF+ +N WN +I Y +N
Sbjct: 247 MRKFGDQYVSDVFVVSSAILMFSDVGCMDYARMVFDRCLNKNTEIWNTMIVAYVQNNCPV 306
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
+A++ F Q L + V +D TL++VL A S+L + + + H + + + NA+
Sbjct: 307 EAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLIIILNAV 366
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+ MY++C +++++ VF+ + RD +SWNT+I+ +G +AL L +M+ + D
Sbjct: 367 MVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEALMLVCEMQKQKFLIDS 426
Query: 349 VTFVGILSAC-----------THMGLVRDGFLYFQSM----VDHYSIIPQIE------HY 387
VT +LSA TH L+R G + F+ M +D Y+ I
Sbjct: 427 VTATALLSAASNLRNLYVGKQTHAYLIRRG-IQFEGMESYLIDMYAKSGSIRTAELLFEQ 485
Query: 388 GCMADL-----------LGRAGLLDQAVSFVRKMPME---PDAVIWTSLLGACRTHKNVE 433
C +D + GL ++A+ +++M ++ P+AV S+L AC + ++
Sbjct: 486 NCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPACSSMGSMG 545
Query: 434 IA 435
+A
Sbjct: 546 LA 547
>Medtr5g024360.1 | PPR containing plant-like protein | HC |
chr5:9808546-9804666 | 20130731
Length = 611
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 276/510 (54%), Gaps = 25/510 (4%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A +F ++ PN +N+M GY+ + + + L+ +M + +P +HFT P V+++
Sbjct: 58 NYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLHLYKQMLQNGYSP-DHFTFPFVLKA 116
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CS G+ VH K GF+ N ++ T L+ MY ++ KVF ++P+ NVV W
Sbjct: 117 CSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYVECKNMESGLKVFDKIPKWNVVAW 176
Query: 122 TAMISAYISCGDVGSGRRLLDLAPE--------RDVVMWSIVISGY----IESGDMVSAR 169
T +I+ Y+ D R L++ E +V M + +I+ +++G V R
Sbjct: 177 TCLINGYV-IND--QPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHER 233
Query: 170 ------ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
+ F N +V+ ++ YA G + ++F +MPERN+ +WN +I Y +
Sbjct: 234 VCKAGYDPFVFASNSNVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQ 293
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
R+++AL F ML G P+ T ++VL C+R L +G+ VH Y ++
Sbjct: 294 YERYNEALGLFFYMLANG-FCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIA 352
Query: 284 VGNALIDMYAKCGVIESAVDVFN-CLDRRDIISWNTMINGLAMHGNTADALSLFDQMK-N 341
+ AL+DMYAK G + SA +FN L+++D++ W +MIN LA+HG+ +ALSLF M+ +
Sbjct: 353 LATALLDMYAKNGELGSAQKIFNNSLEKKDVVMWTSMINALAIHGHGNEALSLFQIMQED 412
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
S PD +T++G+L AC+H+GLV + F M Y I+P+ EHY CM DLL RAG
Sbjct: 413 SSLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFR 472
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYK 461
+A + M + P+ IW +LL C+ H+N+ +A L ELEP + +LSNIY
Sbjct: 473 EAEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYA 532
Query: 462 DLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+ G+W++V R + M+ K G S +E
Sbjct: 533 NSGKWEEVNRTRKMMKHKRIAKTIGHSSVE 562
>Medtr0493s0010.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0493:2001-4149 | 20130731
Length = 611
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 178/538 (33%), Positives = 274/538 (50%), Gaps = 74/538 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ ++F P P+T +N + S + + + F ++ R + F+ ++
Sbjct: 61 LNYSLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLK 120
Query: 61 SCSKAG-AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ G + R+G Q+H A + GF + F+ T LI MY+ G A KVF EM + NVV
Sbjct: 121 GIANDGCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEMSQPNVV 180
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARE-LFDKMPNR 178
W A+++A CG MW ++ G RE +F +M R
Sbjct: 181 AWNAVVTACFRCG------------------MWRVL-------GVSFGWREVVFCEMKMR 215
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D SW+T++ G+A SG F DA FK++L
Sbjct: 216 DDASWSTMIVGFAKSGS-------------------------------FHDAFGFFKELL 244
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
+ + P++ +L VL AC++ GA + GK +H + E G+ + V NALID Y+KCG +
Sbjct: 245 RDRN-RPSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNV 303
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ A VFN LAMHG +A+ +F +M+ S +PDGVTF+ +L AC
Sbjct: 304 DMAKLVFNI--------------SLAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYAC 349
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV G F M + Y I P IEHYGCM DL GRA L +A F+R+MP+ P+ +I
Sbjct: 350 SHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVII 409
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W +LLGAC H N+E+AEL L E++P N + V+LSN+Y G+W+DVA ++ M +
Sbjct: 410 WRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSNVYAVAGKWKDVAGIRRTMIE 469
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR-LHGYVPNLVDV 535
+K+PG S+IE + F + ++ + T+ + LR + + LR GY P + V
Sbjct: 470 QSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLREIMLRLREEEGYAPQVRSV 527
>Medtr4g082470.1 | PPR containing plant-like protein | HC |
chr4:32162319-32165367 | 20130731
Length = 700
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/508 (32%), Positives = 270/508 (53%), Gaps = 28/508 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD++P+ + +W +M Y E + ++LF M R N FT+ +V +C+
Sbjct: 188 ARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRM-REGFLDGNVFTVGSLVTACT 246
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER------N 117
K G + +G+ VH K G + NS+L T+L+ MY G +GDA VF E +
Sbjct: 247 KLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDD 306
Query: 118 VVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSA--------- 168
+V WTAMI Y G + L+L ++ W ++ + ++SA
Sbjct: 307 LVFWTAMIVGYT---QRGYPQAALELFTDKK---WYRILPNSVTLASLLSACAQLENIVM 360
Query: 169 ----RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
L K D N+L++ YA G + VF +++V SWN +I GYA++
Sbjct: 361 GKLLHVLVVKYGLDDTSLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQS 420
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMF 283
G +AL+ F +M +E +P+ T+V VL AC+ +GA +G +H +A G +++
Sbjct: 421 GSAYEALDLFNRMRME-SFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIY 479
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
VG AL++ YAKCG SA VF+ + ++ ++W MI G M G+ +L+LF M
Sbjct: 480 VGTALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEE 539
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
P+ V F +L+AC+H G+V +G + F M + +P ++HY CM DLL RAG L +A
Sbjct: 540 LVPNEVVFTTLLAACSHSGMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEA 599
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+ F+ KMP++P ++ + L C H N + E+A + ++EL P +V++SN+Y
Sbjct: 600 LDFIDKMPVQPGVGVFGAFLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASD 659
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIE 491
GRW V ++ ++ G K+PG S++E
Sbjct: 660 GRWGMVKEVREMIKQRGLNKVPGVSLVE 687
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 132/441 (29%), Positives = 215/441 (48%), Gaps = 24/441 (5%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTL-PIVVRS 61
HAR +F ++P P ++ + + L + H VV F + R N + I++++
Sbjct: 86 HARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVVS-FYNLARTTLGSFNDLVVFSILLKT 144
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
S+ + ++HC K +SF+ T+L++ YS G + DA KVF E+P+R+VV W
Sbjct: 145 ASQLRDIVLTTKLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSW 203
Query: 122 TAMISAYISCGDVGSGRRLLDLAPE-----RDVVMWSIVIS----GYIESGDMVSARELF 172
T+MI AY+ G L + E + S+V + G + G V +
Sbjct: 204 TSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIK 263
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER------NVYSWNVLIGGYARNGR 226
+ + ++ +LLN Y GD+G VF+E ++ W +I GY + G
Sbjct: 264 NGIEINSYLA-TSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGY 322
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
ALE F ++PN TL ++L AC++L + MGK +HV G + + N
Sbjct: 323 PQAALELFTDKKWY-RILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRN 380
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+L+DMYAKCG+I A VF +D++SWN++I+G A G+ +AL LF++M+ P
Sbjct: 381 SLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLP 440
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG-CMADLLGRAGLLDQAVS 405
D VT VG+LSAC +G + G L Y ++ + G + + + G A
Sbjct: 441 DAVTVVGVLSACASVGAHQIG-LSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARM 499
Query: 406 FVRKMPMEPDAVIWTSLLGAC 426
M E +AV W +++G C
Sbjct: 500 VFDGMG-EKNAVTWAAMIGGC 519
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
TL++ YA+ G + +F +P +S+ ++I + N S + +F +
Sbjct: 72 TTLISLYASFGFLRHARTLFHRLPSPTHHSFKLIIRWHFLNDVHSHVV-SFYNLARTTLG 130
Query: 244 VPNDFTLVAVLL-ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
ND + ++LL S+L + + +H + FV +L+D Y+KCG + A
Sbjct: 131 SFNDLVVFSILLKTASQLRDIVLTTKLHCNILK-SNAADSFVLTSLVDAYSKCGKLRDAR 189
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ + R ++SW +MI + + L LF++M+ + T +++ACT +G
Sbjct: 190 KVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLG 249
Query: 363 LVRDG 367
+ G
Sbjct: 250 CLHQG 254
>Medtr1g083890.1 | PPR containing plant-like protein | HC |
chr1:37365601-37367754 | 20130731
Length = 490
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 136/334 (40%), Positives = 215/334 (64%), Gaps = 2/334 (0%)
Query: 159 YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
Y G M A ++FD+M +R+V+ WN ++NG+ GD+ K+F+ M +R+V SWN++I
Sbjct: 153 YSNCGKMEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMI 212
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
A+ + +A F++ML +G P+D TLV VL C+RLG +D G+W+H YA+ G
Sbjct: 213 SCLAQRKKDGEAFGIFREMLEQG-FEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGL 271
Query: 279 -KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFD 337
+ + VGN+L+D Y KCG +E+A VFN + +++++SWN MI+GL ++G + LF+
Sbjct: 272 LRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFE 331
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
+M P TFVG+L+ C H G V G F SM + + P++EHYGC+ DLLGR
Sbjct: 332 KMARKGVTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRC 391
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
G + +A +R MP+ P+A +W +LL ACRTH + E+AE+A + L+ LEP N N+V+LS
Sbjct: 392 GHVKEAYDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLS 451
Query: 458 NIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
N+Y + +W +V ++++ M+ G +K PG S ++
Sbjct: 452 NVYAEERKWNEVEKVRVLMQGVGIKKNPGQSALQ 485
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 167/369 (45%), Gaps = 45/369 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +F+ PN +N++ +S F M ++FT P ++++
Sbjct: 59 YATTIFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKAT 118
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S G+ +H GF +S + L+E+YS G + DA KVF EM R VVVW
Sbjct: 119 SYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWN 178
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY----------------IESG--- 163
MI+ + GD+ G +L +R VV W+++IS +E G
Sbjct: 179 IMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEP 238
Query: 164 ---DMVSARELFDKMPNRDVMSW------------------NTLLNGYANSGDVGSFEKV 202
+V+ + ++ + D W N+L++ Y G++ + KV
Sbjct: 239 DDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKV 298
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F EM ++NV SWN +I G NG+ +E F++M +G V P+D T V VL C+ G
Sbjct: 299 FNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKG-VTPSDSTFVGVLACCAHAGF 357
Query: 263 LDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTM 319
+D G+ + + ++ +K + + + ++D+ +CG ++ A D+ N + W +
Sbjct: 358 VDKGREI-FDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLIRNMPLMPNAALWGAL 416
Query: 320 INGLAMHGN 328
++ HG+
Sbjct: 417 LSACRTHGD 425
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 34/254 (13%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F N+ +N +I ++ F + F M + +++P++FT +L A S L
Sbjct: 63 IFNHTHHPNILLFNSIIKAHSSFPPFHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLR 122
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
D+G+ +H + ++G+ + V L+++Y+ CG +E A VF+ + R+++ WN MIN
Sbjct: 123 DYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDANKVFDEMLHREVVVWNIMIN 182
Query: 322 GLAMHGNTADALSLFDQMKNS-------------------------RE------QPDGVT 350
G G+ L LF +M RE +PD T
Sbjct: 183 GFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDAT 242
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG-CMADLLGRAGLLDQAVSFVRK 409
V +L C +G V D + S D ++ ++ G + D + G L+ A +
Sbjct: 243 LVTVLPVCARLGDV-DAGEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNE 301
Query: 410 MPMEPDAVIWTSLL 423
M + + V W +++
Sbjct: 302 M-TKKNVVSWNAMI 314
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 124/328 (37%), Gaps = 55/328 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGY-----------------------------SLTES 31
M A KVFD+M WN M NG+ L +
Sbjct: 159 MEDANKVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQR 218
Query: 32 HRD--VVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSF- 88
+D +F EM P + TL V+ C++ G V GE +H A +G
Sbjct: 219 KKDGEAFGIFREMLEQGFEP-DDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVIS 277
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERD 148
+ +L++ Y G++ A+KVF EM ++NVV W AMIS G G L + +
Sbjct: 278 VGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKG 337
Query: 149 VVMWSIVISGYI----ESGDMVSARELFDKMPNRDVMS-----WNTLLNGYANSGDVGSF 199
V G + +G + RE+FD M + +S + +++ G V
Sbjct: 338 VTPSDSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEA 397
Query: 200 EKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
+ MP N W L+ +G A A K+++ ++ L++ + A
Sbjct: 398 YDLIRNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEE 457
Query: 259 RLGALDMGKW-----VHVYAESIGYKGN 281
R KW V V + +G K N
Sbjct: 458 R-------KWNEVEKVRVLMQGVGIKKN 478
>Medtr3g098280.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:44861451-44859606 | 20130731
Length = 554
Score = 293 bits (750), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 144/362 (39%), Positives = 227/362 (62%), Gaps = 3/362 (0%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+ ++ N L+N Y + G + K+F+EM R++ SW+ LI +N ++AL F+Q
Sbjct: 109 DTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQ 168
Query: 237 MLVEGDVVPN---DFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
M + + N +++V+ A S LG +++G WVH + +G + +G ALI+MY+
Sbjct: 169 MQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYS 228
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
+CG+I+ +V VF+ + R++++W +INGLA+HG + +AL +F +MK S +PDG F+G
Sbjct: 229 RCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIG 288
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H GLV DG+ F+SM D + I P +EHYGCM DLLGRAGL+ +A FV +MP++
Sbjct: 289 VLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLK 348
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
P++VIW +LLGAC H ++ +AE A + +IEL+P + ++V+LSN Y +G W A L+
Sbjct: 349 PNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLR 408
Query: 474 IAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLV 533
+M+ K PG S + + V EF S D HP+ E I + L + ++L GY PN
Sbjct: 409 NSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVKLGGYTPNTS 468
Query: 534 DV 535
V
Sbjct: 469 SV 470
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 158/343 (46%), Gaps = 32/343 (9%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A V ++P P + ++N + S T + + LF+ M+R + P +HFT P++++
Sbjct: 39 YAATVLLRLPTPPDPFSYNTIIKHVSPTGA----ISLFSHMHRNSV-PFDHFTFPLILKH 93
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
K GF N F+ ALI Y ++GS+ A K+F EM R++V W
Sbjct: 94 HHHHLLHSL-------IFKLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSW 146
Query: 122 TAMISAYISCGDVGSGRRLLDLAP--ERDVVMW---SIVIS--------GYIESGDMVSA 168
+ +IS + + RD+ W +I++S G IE G V +
Sbjct: 147 STLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHS 206
Query: 169 RELFDKMPNRDVMSWNT-LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+M + T L+N Y+ G + KVF+EMPERNV +W LI G A +GR
Sbjct: 207 --FIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGLAVHGRS 264
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+AL+ F +M E + P+ + VL+ACS G ++ G + + G K +
Sbjct: 265 REALKVFYEM-KESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYG 323
Query: 287 ALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGN 328
++D+ + G+I A D + + + + W T++ H +
Sbjct: 324 CMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNH 366
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 9/210 (4%)
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+G+ N+FV NALI+ Y G ++ AV +F+ + RRDI+SW+T+I+ L + A+ALS
Sbjct: 105 KLGFDTNIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALS 164
Query: 335 LFDQM----KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+F QM ++ R D + ++SA + +G++ G ++ S + I+ + +
Sbjct: 165 VFQQMQMGHRDIRNWLDRAIMLSVISAVSSLGVIELG-IWVHSFIVRMGIVMTVPLGTAL 223
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE--LEPK 448
++ R GL+D++V +MP E + V WT+L+ H A F + E L+P
Sbjct: 224 INMYSRCGLIDRSVKVFDEMP-ERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKP- 281
Query: 449 NPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
+ A F+ + G +D R+ +MRD
Sbjct: 282 DGALFIGVLVACSHGGLVEDGWRVFESMRD 311
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 114/264 (43%), Gaps = 17/264 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM---NRAAAAPLNHFTLPIVVR 60
A K+FD+M + +W+ + + + + +F +M +R L+ + V+
Sbjct: 131 AVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQMGHRDIRNWLDRAIMLSVIS 190
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S G + G VH + G L TALI MYS G + + KVF EMPERNVV
Sbjct: 191 AVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVT 250
Query: 121 WTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVI---SGYIESGDMV--SAR 169
WTA+I+ G ++ L P+ + + +V G +E G V S R
Sbjct: 251 WTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIGVLVACSHGGLVEDGWRVFESMR 310
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-NVYSWNVLIGGYARNGRFS 228
+ F P + + +++ +G + EEMP + N W L+G +
Sbjct: 311 DEFGIKPMLE--HYGCMVDLLGRAGLILEAFDFVEEMPLKPNSVIWRTLLGACVNHNHLG 368
Query: 229 DALEAFKQMLVEGDVVPNDFTLVA 252
A +A ++++ D+ L++
Sbjct: 369 LAEKARERIIELDPYHDGDYVLLS 392
>Medtr4g118700.1 | PPR containing plant-like protein | HC |
chr4:49164700-49162766 | 20130731
Length = 625
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/594 (30%), Positives = 284/594 (47%), Gaps = 73/594 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HARK+FD+MPE +T WNAM YS ++ LF M R + + ++F+ + SC
Sbjct: 23 HARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDSKPDNFSYSAAINSC 82
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM--------- 113
+ A +R G ++H + G++ + + ALI+MY + DA KVF EM
Sbjct: 83 AGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKVFDEMNYSNEVTWC 142
Query: 114 ----------------------PERNVVVWTAMISAYISCGDVGSGRRLLDLAPER---- 147
PE+ + W +I+A+ CG+V + L E
Sbjct: 143 SLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACLHLFKEMCENLYQP 202
Query: 148 DVVMWSIVISGYIESGDMV-----------------------------------SARELF 172
D +S ++S ES + + A ++F
Sbjct: 203 DQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKVF 262
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ + +SWN +++ + GD F++ PE+N+ SW +I GY RNG AL
Sbjct: 263 NSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLALS 322
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F M +D AVL AC+ L L GK VH +G +FVGN+LI+MY
Sbjct: 323 LFLDM-KRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMY 381
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG IE + ++ +D++SWN+M+ ++G +A+ +F +M S +PD VTF
Sbjct: 382 AKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVTFT 441
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
G+L C+H+GL+ +GF +FQSM Y ++ ++H CM D+LGR G + +A S RK
Sbjct: 442 GLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARKYSK 501
Query: 413 EPDAVIWTS--LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
+ LLGAC H ++ +++ LEPK +V+LSN+Y G+W++
Sbjct: 502 TSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLLSNMYCASGKWKEAE 561
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
++ M D G +K+PGCS IE + V F S + +P I + L L + +R
Sbjct: 562 MVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKILYFLELEMR 615
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 190/462 (41%), Gaps = 110/462 (23%)
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG------DV-GSGRRLLDL 143
T+ I + G + A K+F EMPER+ V W AM++AY G D+ S RR+ D
Sbjct: 9 TSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRRISDS 68
Query: 144 APER--------------DVVMWS-----IVISGYIESGDMVSA--------------RE 170
P+ D+ + +V+SGY S + +A R+
Sbjct: 69 KPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARK 128
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
+FD+M + ++W +LL YAN+ ++F MPE+ +WN++I +AR G
Sbjct: 129 VFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEAC 188
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
L FK+M E P+ +T A++ AC+ G +H + G+ M V N+++
Sbjct: 189 LHLFKEM-CENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVS 247
Query: 291 MYAKCGVIESAVDVFNC-------------------------------LDRRDIISWNTM 319
YAK AV VFN ++I+SW +M
Sbjct: 248 FYAKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSM 307
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT----------------HMGL 363
I G +GN ALSLF MK + Q D + +L AC H+GL
Sbjct: 308 IVGYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGL 367
Query: 364 VRDGFLYF-QSMVDHYSIIPQIE---------------HYGCMADLLGRAGLLDQAVSFV 407
D +L+ S+++ Y+ IE + M G G ++A+
Sbjct: 368 --DKYLFVGNSLINMYAKCGDIEGSKLALRGINDKDLVSWNSMLFAFGLNGRGNEAICMF 425
Query: 408 RKM---PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
R+M + PD V +T LL C +H + AF + LE
Sbjct: 426 REMVASGVRPDEVTFTGLLMTC-SHLGLIDEGFAFFQSMSLE 466
>Medtr4g074470.1 | PPR containing plant-like protein | HC |
chr4:28370337-28367680 | 20130731
Length = 542
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 163/462 (35%), Positives = 243/462 (52%), Gaps = 51/462 (11%)
Query: 53 FTLPIVVRSCSKAGAV----------------REGEQVHCVAAKRGFKWNSFLCTALIEM 96
+T V+++CS+A + +G ++HC K GF+ + + +L+
Sbjct: 109 YTCNFVLKACSRAYKLIQESGSCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYF 168
Query: 97 YSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVI 156
YS CG V R L D + +V W+I+I
Sbjct: 169 YS-------------------------------QCGLVSVARHLFDQIKDTSLVSWNIMI 197
Query: 157 SGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
S Y D SA L + MP + V+SWNTL+ Y GDV + +VF MPERN SWN
Sbjct: 198 SAYDLVNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNS 257
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
+I G ++ ALE F +M G V P + TL+++L AC+ GAL++G ++ +
Sbjct: 258 MIAGCVSVRDYAGALELFSEMQNAG-VKPTEVTLISILGACAETGALEIGHKIYESLKVC 316
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
+K ++GNAL++MY KCG + A ++FN + + + WN M+ GLA+HG + LF
Sbjct: 317 EHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLF 376
Query: 337 DQMKNS---REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADL 393
+M+ S +PD VTF+G+L AC+H GLV YF MV Y I+P +HYGCM DL
Sbjct: 377 TEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDL 436
Query: 394 LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANF 453
L R GLL++A + P + V+W +LLGACRT N E+AE++F+ L +L+ ++
Sbjct: 437 LSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDY 496
Query: 454 VMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
V+LSNIY + GRW +V RL+ M + G S I +S
Sbjct: 497 VLLSNIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINMKES 538
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 147/360 (40%), Gaps = 58/360 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD++ + + +WN M + Y L + L M
Sbjct: 178 ARHLFDQIKDTSLVSWNIMISAYDLVNDYESADYLLELM--------------------- 216
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K WN+ LI Y G V A +VFG MPERN V W +
Sbjct: 217 --------------PCKTVVSWNT-----LIARYIRLGDVQAARRVFGCMPERNAVSWNS 257
Query: 124 MISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFD--KM 175
MI+ +S D L + P +V + SI + E+G + ++++ K+
Sbjct: 258 MIAGCVSVRDYAGALELFSEMQNAGVKPT-EVTLISI-LGACAETGALEIGHKIYESLKV 315
Query: 176 PNRDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ S+ N L+N Y G++ ++F M + V WN ++ G A +G + +
Sbjct: 316 CEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQL 375
Query: 234 FKQM--LVEGDVVPNDFTLVAVLLACSRLGALDMGKWV--HVYAESIGYKGNMFVGNALI 289
F +M + G + P+ T + VL+ACS G +D +W H+ + G ++
Sbjct: 376 FTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYG-CMV 434
Query: 290 DMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
D+ ++ G++E A + + ++ W T++ NT A F Q+ ++ DG
Sbjct: 435 DLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDG 494
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 21/278 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VF MPE N +WN+M G + + LF+EM A P TL ++ +C+
Sbjct: 240 ARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKP-TEVTLISILGACA 298
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ GA+ G +++ K S+L AL+ MY G++ A+++F M + V W A
Sbjct: 299 ETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNA 358
Query: 124 MISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFDKMP 176
M+ G +L E D V + V+ G + AR FD M
Sbjct: 359 MVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMV 418
Query: 177 NR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERN-VYSWNVLIGGYARNGRFSDA 230
R D + +++ + G + ++ P +N V W L+G A
Sbjct: 419 KRYKIVPDSKHYGCMVDLLSRWGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELA 478
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+FKQ+ ++ D+ L++ + A + G+W
Sbjct: 479 EISFKQLAKLKQLIDGDYVLLSNIYA-------EAGRW 509
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 113/256 (44%), Gaps = 23/256 (8%)
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL----- 263
N + N +I ++ + AL + QML+ +VV + +T VL ACSR L
Sbjct: 71 HNPFISNTMIRAFSHSCFPLQALLIYNQMLI-NNVVSDSYTCNFVLKACSRAYKLIQESG 129
Query: 264 -----------DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
+ G +H IG++ + V N+L+ Y++CG++ A +F+ +
Sbjct: 130 SCDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTS 189
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
++SWN MI+ + + A L + M V++ +++ +G V+ F
Sbjct: 190 LVSWNIMISAYDLVNDYESADYLLELMPC----KTVVSWNTLIARYIRLGDVQAARRVFG 245
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
M + ++ GC++ + AG L+ S ++ ++P V S+LGAC +
Sbjct: 246 CMPERNAVSWNSMIAGCVS-VRDYAGALE-LFSEMQNAGVKPTEVTLISILGACAETGAL 303
Query: 433 EIAELAFQHLIELEPK 448
EI ++ L E K
Sbjct: 304 EIGHKIYESLKVCEHK 319
>Medtr5g049780.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:21773208-21775311 | 20130731
Length = 662
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 284/545 (52%), Gaps = 16/545 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP + TWN+M + + ++ + L++ M P + +T + ++ S
Sbjct: 54 ARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLP-DAYTFSAIFKAFS 112
Query: 64 KAGAVREGEQVHCVAAKRGFK-WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G REG++ H +A GF+ + F+ T +++MY+ G + DA VF + +++VV++T
Sbjct: 113 EMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFT 172
Query: 123 AMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
A+I Y G G + + + P + +V G + GD+V+ + + +
Sbjct: 173 ALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNL--GDLVNGKLIHGLVV 230
Query: 177 NRD----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
V S +LL Y+ V KVF + + +W I G +NGR AL
Sbjct: 231 KYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALS 290
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M+ + PN FTL ++L ACS L L+ G+ +H +G GN FV ALI +Y
Sbjct: 291 MFREMM-RCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLY 349
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KCG +E A VF+ L DI+S NTMI A +G +AL LF+++K +P+ VTF+
Sbjct: 350 GKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFI 409
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
IL AC + GLV +G F + +++SI +HY CM DLLGRA ++A + +
Sbjct: 410 SILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEE-GK 468
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
PD + W +LL AC+ H VE+AE + +++ P++ ++L+NIY G+W +V +
Sbjct: 469 NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEM 528
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
K A RD +K P S ++ + V F + D HP I L L + GY P+
Sbjct: 529 KSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDT 588
Query: 533 VDVAQ 537
V Q
Sbjct: 589 KFVLQ 593
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 141/278 (50%), Gaps = 5/278 (1%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+ L++GY + K+F+EMP R++ +WN +I + G+ +A+E + ML EG V
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEG-V 97
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALIDMYAKCGVIESAV 302
+P+ +T A+ A S +G G+ H A +G++ + FV ++DMYAK G ++ A
Sbjct: 98 LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDAR 157
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ + +D++ + +I G HG +AL +F+ M SR +P+ T +L +C ++G
Sbjct: 158 FVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ +G L +V Y + + + + + +++ ++ + V WTS
Sbjct: 218 DLVNGKL-IHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAY-ASHVTWTSF 275
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
+ + E+A F+ ++ +P +F + S ++
Sbjct: 276 IVGLVQNGREEVALSMFREMMRCSI-SPNHFTLSSILH 312
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 166/366 (45%), Gaps = 27/366 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR VFD++ + + + A+ GY+ + + +F +M + P N +TL V+
Sbjct: 153 MKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKP-NEYTLASVLV 211
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC G + G+ +H + K G + T+L+ MYS V D+ KVF + + V
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY--------------IESGDMV 166
WT+ I G V +GR + L+ R+++ SI + + +E+G+ +
Sbjct: 272 WTSFI-----VGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQI 326
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
A + + + L++ Y G+V VF+ + E ++ S N +I YA+NG
Sbjct: 327 HAVTVKLGVDGNKFVD-AALIHLYGKCGNVEKARSVFDSLTELDIVSINTMIYAYAQNGF 385
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA---ESIGYKGNMF 283
+ALE F+++ G + PN T +++LLAC+ G ++ G + SI + +
Sbjct: 386 GHEALELFERLKKLG-LEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY 444
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+ID+ + E A + D+I W T++N +HG A +M +
Sbjct: 445 --TCMIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502
Query: 344 EQPDGV 349
+ G
Sbjct: 503 PRDGGT 508
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 251 VAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR 310
+++ C+ +L K +H + G + F G+ LID Y KC VI A +F+ +
Sbjct: 5 TSLIAQCTNKKSLTTLKSLHTHILKSGSLFSFF-GHKLIDGYIKCSVITEARKLFDEMPN 63
Query: 311 RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG-FL 369
R I++WN+MI+ G T +A+ L+ M PD TF I A + MG+ R+G
Sbjct: 64 RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKA 123
Query: 370 YFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTH 429
+ ++V + + G + D+ + G + A FV ++ D V++T+L+ H
Sbjct: 124 HGLAVVLGFEVSDGFVATG-IVDMYAKFGKMKDA-RFVFDRVLDKDVVLFTALIVGYNQH 181
>Medtr1g040000.1 | PPR containing plant-like protein | HC |
chr1:14632880-14635263 | 20130731
Length = 526
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/497 (36%), Positives = 257/497 (51%), Gaps = 68/497 (13%)
Query: 26 YSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKW 85
Y+L S+ + V R + ++LP V++S G+Q+HCV G
Sbjct: 86 YALYSSNAKLAVSIFRSVRRLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGL-- 143
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAP 145
++NV V +++I Y SC DV
Sbjct: 144 -----------------------------DKNVSVCSSLIQMY-SCYDV----------- 162
Query: 146 ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
SAR+LFD+ + N ++ Y GDV + K+F+
Sbjct: 163 --------------------CSARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLFDS 201
Query: 206 MPERN--VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
M ER+ V+SW +I GY + ++A++ F++M +E +V P++ ++AVL AC+ LGAL
Sbjct: 202 MLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLE-NVKPDEIAILAVLSACADLGAL 260
Query: 264 DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGL 323
+G+W+H Y E + + N+LIDMYAK G I A+++F + + II+W TMI GL
Sbjct: 261 HLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTIITWTTMIAGL 320
Query: 324 AMHGNTADALSLFDQM-KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
A+HG +AL +F M K R +P+ VTF+ ILSAC+H+GLV G YF SM Y I P
Sbjct: 321 ALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEP 380
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+IEHYGCM DLLGRAG L +A V +MP E +A IW SLL A + E+AE A +HL
Sbjct: 381 KIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHL 440
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSL 502
LEP + N+ +LSN Y LGRW + ++ M+D G K+PG S IE N+ V EF +
Sbjct: 441 TVLEPGHCGNYSLLSNTYASLGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAG 500
Query: 503 DERHPETESIYRALRGL 519
D+ IY L L
Sbjct: 501 DKLSIYFVDIYDVLHSL 517
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 109/252 (43%), Gaps = 14/252 (5%)
Query: 1 MGHARKVFDKMPE--PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
+ +ARK+FD M E + +W AM +GY+ + + + LF M P + + V
Sbjct: 192 VSNARKLFDSMLERDKDVFSWTAMISGYTQAHNPNEAIKLFRRMQLENVKP-DEIAILAV 250
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ +C+ GA+ GE +H K L +LI+MY+ G++ A ++F M + +
Sbjct: 251 LSACADLGALHLGEWIHNYIEKHKLSKIVPLYNSLIDMYAKSGNIRKALELFENMKHKTI 310
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERD-----VVMWSIVISGYIESGDMVSARELFD 173
+ WT MI+ G R+ + D V + ++S G + R+ F
Sbjct: 311 ITWTTMIAGLALHGLGKEALRVFSCMEKEDRVKPNEVTFIAILSACSHVGLVELGRDYFT 370
Query: 174 KMPNR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRF 227
M +R + + +++ +G + +++ MP E N W L+ R G
Sbjct: 371 SMRSRYGIEPKIEHYGCMIDLLGRAGHLQEAKEMVLRMPFEANAAIWGSLLAASTRCGDA 430
Query: 228 SDALEAFKQMLV 239
A EA + + V
Sbjct: 431 ELAEEALRHLTV 442
>Medtr8g066670.1 | chlororespiratory reduction protein, putative |
LC | chr8:27704772-27714873 | 20130731
Length = 1504
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/595 (30%), Positives = 285/595 (47%), Gaps = 82/595 (13%)
Query: 4 ARKVFDKMP--EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A KVFD+MP + N WN+M GY + + V LF +M + +L +
Sbjct: 263 AEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSA 322
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVV 120
C+ AV EG+Q H + GF+ N L ++++ YS G + + VF M ++ V
Sbjct: 323 CANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVELVFRSMAVLKDEVT 382
Query: 121 WTAMISAYISCG------------------------------------DVGSGRRLLDLA 144
W MIS+Y+ G DV G++L
Sbjct: 383 WNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAADTRDVKLGKKLHGFC 442
Query: 145 PER----DVVMWSIVISGYIESGDMVSARELFD-KMPNRDVMSWNTLLNGYANSGDVGSF 199
D+ + S V+ Y + G M AR +F +D++ WNT+L A G G
Sbjct: 443 IRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVLWNTMLAACAEKGLSGEA 502
Query: 200 EKVFEEMPER----NVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-------------- 241
K+F +M NV SWN LI G+ RNG+ +A + F +M + G
Sbjct: 503 LKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISG 562
Query: 242 --------------------DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
+ PN ++ + L AC+ + L+ G+ +H Y +
Sbjct: 563 LAQNGLGYEASRVFQQMQGAGMRPNSISITSALSACTNMALLNYGRSIHGYVMRNFMSFS 622
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
+ + ++IDMYAKCG ++ A VF +++ +N MI+ A HG +A+AL+LF ++
Sbjct: 623 LQITTSIIDMYAKCGNLDDAKFVFIICSTKELPVYNAMISAYASHGKSAEALALFQELVK 682
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
PD +TF +LSAC+H L+++G F+ MV + P +HYGC+ LL G LD
Sbjct: 683 QGIMPDHITFTSVLSACSHGRLLKEGLELFKYMVCELQMKPSEKHYGCLVKLLTNDGQLD 742
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYK 461
+A+ + MP PDA I SLL AC + E+A + L+++EP NP N+V LSN+Y
Sbjct: 743 EALRIILTMPSPPDAHILGSLLAACGQNHETELANYIAKWLLKVEPNNPGNYVALSNVYA 802
Query: 462 DLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
LG+W +V+ ++ M++ G +K+PGCS IE + F + D+ HPE E IY+ L
Sbjct: 803 ALGKWDEVSNIRGFMKEKGLKKIPGCSWIEVGQELNVFIASDKSHPEKEEIYKIL 857
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 22/414 (5%)
Query: 32 HRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNS--FL 89
+++ ++ + EM P N F +P +++C + G +H K G +++ ++
Sbjct: 188 YKEALLSYVEMMEKGFCPDN-FVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYV 246
Query: 90 CTALIEMYSAKGSVGDAYKVFGEMP--ERNVVVWTAMISAYISCG-DVGSGRRLLDLAPE 146
T+L++MY G + DA KVF EMP +RN VVW +MI Y+ G +V + + E
Sbjct: 247 ATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFE 306
Query: 147 RDVVMWSIVISGY---------IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVG 197
V + +SG+ +E G A + V+ ++++N Y+ G +
Sbjct: 307 GGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLG-SSIMNFYSKVGLIE 365
Query: 198 SFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
E VF M ++ +WN++I Y + G F ALE M E ++ + TL ++L
Sbjct: 366 EVELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLAL 425
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDIIS 315
+ + +GK +H + + +M V + ++DMYAKCG+++ A VF+ ++DI+
Sbjct: 426 AADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVFHFAGKKKDIVL 485
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
WNTM+ A G + +AL LF QM+ P+ V++ ++ G V + F M
Sbjct: 486 WNTMLAACAEKGLSGEALKLFFQMQMESVPPNVVSWNSLIFGFFRNGQVVEAQDMFSEM- 544
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGAC 426
+ P + + M L + GL +A ++M M P+++ TS L AC
Sbjct: 545 QLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITSALSAC 598
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 132/275 (48%), Gaps = 16/275 (5%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+L++ Y G + EKVF+EMP +RN WN +I GY +NG +A+ F++M EG
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGG 308
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V P++ +L AC+ L A++ GK H +G++ N +G+++++ Y+K G+IE
Sbjct: 309 VEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEVE 368
Query: 303 DVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSAC-- 358
VF + +D ++WN MI+ G AL + M+ + D VT +L+
Sbjct: 369 LVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDCVTLSSLLALAAD 428
Query: 359 ---THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+G GF +++ + D+ + G++D A + D
Sbjct: 429 TRDVKLGKKLHGFCIRNEFYSDMAVLSGV------LDMYAKCGIMDCARGVFHFAGKKKD 482
Query: 416 AVIWTSLLGACRTHK-NVEIAELAFQHLIELEPKN 449
V+W ++L AC + E +L FQ +E P N
Sbjct: 483 IVLWNTMLAACAEKGLSGEALKLFFQMQMESVPPN 517
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 119/227 (52%), Gaps = 17/227 (7%)
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+N++S+ ++G ARNG + +AL ++ +M+ +G P++F + L AC L + G+
Sbjct: 170 QNLFSYAAIVGLQARNGLYKEALLSYVEMMEKG-FCPDNFVVPNGLKACGGLRWIGFGRG 228
Query: 269 VHVYAESIG--YKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMINGLA 324
+H + +G + G ++V +L+DMY KCGV+E A VF+ + +R+ + WN+MI G
Sbjct: 229 IHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYV 288
Query: 325 MHGNTADALSLFDQMK-NSREQPDGVTFVGILSACTHMGLVRDG-----FLYFQSMVDHY 378
+G +A+ LF++M+ +P V+ G SAC ++ V +G + +Y
Sbjct: 289 QNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNY 348
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+ I ++ + GL+++ R M + D V W ++ +
Sbjct: 349 VLGSSIMNF------YSKVGLIEEVELVFRSMAVLKDEVTWNLMISS 389
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
Query: 218 IGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIG 277
I +N + +A+ Q+ + P+ + +L C L +G +H + G
Sbjct: 76 ISFLCKNLKLQEAISTLSQLPQHTPIGPDIYG--ELLQGCVYARDLSLGLQIHAHLIKKG 133
Query: 278 --YKGNMFVGNALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTADALS 334
Y N FV + L+ +YAKC + AV F N + +++ S+ ++ A +G +AL
Sbjct: 134 SSYSTNEFVESKLVILYAKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALL 193
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC----- 389
+ +M PD L AC G +R ++ F + + + E GC
Sbjct: 194 SYVEMMEKGFCPDNFVVPNGLKAC---GGLR--WIGFGRGIHGFVVKMGNEFDGCVYVAT 248
Query: 390 -MADLLGRAGLLDQAVSFVRKMP-MEPDAVIWTSLL-GACRTHKNVE 433
+ D+ G+ G+L+ A +MP + + V+W S++ G + NVE
Sbjct: 249 SLVDMYGKCGVLEDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVE 295
>Medtr4g108030.1 | PPR containing plant-like protein | HC |
chr4:44776233-44777913 | 20130731
Length = 544
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 219/379 (57%), Gaps = 4/379 (1%)
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
V +++ Y CG V R L D + +V W+I+IS Y D A L + MP +
Sbjct: 163 VQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELMPCKT 222
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
V+SWNTL+ Y GDV + +VF MPERN SWN +I G ++ ALE F +M
Sbjct: 223 VISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQN 282
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
G V P + TL+++L AC+ GAL++G ++ + +K ++GNAL++MY KCG +
Sbjct: 283 AG-VKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLS 341
Query: 300 SAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS---REQPDGVTFVGILS 356
A ++FN + + + WN M+ GLA+HG + LF +M+ S +PD VTF+G+L
Sbjct: 342 LAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLV 401
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC+H GLV YF MV Y I+P +HYGCM DLL R GLL++A + P +
Sbjct: 402 ACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSV 461
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
V+W +LLGACRT N E+AE++F+ L +L+ ++V+LSNIY + GRW +V RL+ M
Sbjct: 462 VLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLSNIYAEAGRWDEVERLRSEM 521
Query: 477 RDTGFRKLPGCSVIECNDS 495
+ G S I +S
Sbjct: 522 DYLHVPRQAGYSQINMKES 540
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 146/360 (40%), Gaps = 58/360 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD++ + + +WN M + Y + + L M
Sbjct: 180 ARYLFDQIKDTSLVSWNIMISAYDRVDDYELADHLLELM--------------------- 218
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K WN+ LI Y G V A +VFG MPERN V W +
Sbjct: 219 --------------PCKTVISWNT-----LIARYIRLGDVQAARRVFGCMPERNAVSWNS 259
Query: 124 MISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFD--KM 175
MI+ +S D L + P +V + SI + E+G + ++++ K+
Sbjct: 260 MIAGCVSVRDYAGALELFSEMQNAGVKPT-EVTLISI-LGACAETGALEIGHKIYESLKV 317
Query: 176 PNRDVMSW--NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ S+ N L+N Y G++ ++F M + V WN ++ G A +G + +
Sbjct: 318 CEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNAMVIGLAVHGYCEEVFQL 377
Query: 234 FKQM--LVEGDVVPNDFTLVAVLLACSRLGALDMGKWV--HVYAESIGYKGNMFVGNALI 289
F +M + G + P+ T + VL+ACS G +D +W H+ + G ++
Sbjct: 378 FTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYG-CMV 436
Query: 290 DMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
D+ + G++E A + + ++ W T++ NT A F Q+ ++ DG
Sbjct: 437 DLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDG 496
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 21/278 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VF MPE N +WN+M G + + LF+EM A P TL ++ +C+
Sbjct: 242 ARRVFGCMPERNAVSWNSMIAGCVSVRDYAGALELFSEMQNAGVKP-TEVTLISILGACA 300
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ GA+ G +++ K S+L AL+ MY G++ A+++F M + V W A
Sbjct: 301 ETGALEIGHKIYESLKVCEHKIESYLGNALVNMYCKCGNLSLAWEIFNGMKMKTVSCWNA 360
Query: 124 MISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELFDKMP 176
M+ G +L E D V + V+ G + AR FD M
Sbjct: 361 MVIGLAVHGYCEEVFQLFTEMEESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMV 420
Query: 177 NR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERN-VYSWNVLIGGYARNGRFSDA 230
R D + +++ G + ++ P +N V W L+G A
Sbjct: 421 KRYKIVPDSKHYGCMVDLLTRRGLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELA 480
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKW 268
+FKQ+ ++ D+ L++ + A + G+W
Sbjct: 481 EISFKQLAKLKQLIDGDYVLLSNIYA-------EAGRW 511
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 112/257 (43%), Gaps = 25/257 (9%)
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL------ 263
N + N +I ++ + AL + QML+ +VV + +T VL ACSR L
Sbjct: 72 NPFISNTMIRAFSHSCFPLQALLIYNQMLI-NNVVSDSYTCNFVLKACSRAYKLIQESGS 130
Query: 264 ------------DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
+ G +H IG++ + V N+L+ Y++CG++ A +F+ +
Sbjct: 131 CDDDDDNLVVVYNKGTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDT 190
Query: 312 DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYF 371
++SWN MI+ + D L D + +++ +++ +G V+ F
Sbjct: 191 SLVSWNIMISAY----DRVDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVF 246
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
M + ++ GC++ + AG L+ S ++ ++P V S+LGAC
Sbjct: 247 GCMPERNAVSWNSMIAGCVS-VRDYAGALE-LFSEMQNAGVKPTEVTLISILGACAETGA 304
Query: 432 VEIAELAFQHLIELEPK 448
+EI ++ L E K
Sbjct: 305 LEIGHKIYESLKVCEHK 321
>Medtr1g084570.1 | PPR containing plant-like protein | HC |
chr1:37638715-37636265 | 20130731
Length = 606
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 280/543 (51%), Gaps = 21/543 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +FD+MP + W +M GY+ H +F M R P N FT+ V+++C
Sbjct: 60 AHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKP-NAFTVSAVLKACK 118
Query: 64 KAGAVREGEQVHCVAAKRGFKWNS-FLCTALIEMY-SAKGSVGDAYKVFGEMPERNVVVW 121
A+ G+ VH +A K G + +S ++ AL++MY + S+ +A VF ++ +N V W
Sbjct: 119 SLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFEDIGTKNAVSW 178
Query: 122 TAMISAYISCGDVGSGRRLL--------DLAPERDVVMWSIVISGYIESGDMVSARELFD 173
T +I+ Y D G R+ +L+P +SI +S G +++
Sbjct: 179 TTLITGYTHRRDAFGGLRVFRQMFMEEGELSP----FSFSIAVSACASIGSSNLGKQVHA 234
Query: 174 KMPNRDVMS----WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ N S N +L+ Y +++F EM +++ +WN LI G+ + +
Sbjct: 235 AVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSY-E 293
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
+L F QM+ EG PN FT +V+ AC+ L L G+ +H G N+ + NALI
Sbjct: 294 SLCIFSQMVSEG-FSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALI 352
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG + + +F+ + +++SW +M+ G HG+ +A+ LF++M S +PD +
Sbjct: 353 DMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKI 412
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
F+ +LSAC+H GLV +G YF+ M +Y++ P + Y C+ DLL RAG + +A +
Sbjct: 413 VFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIEN 472
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP +PD IW +LLGAC+ +K I +LA ++E++P +V+LSN G W D
Sbjct: 473 MPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADF 532
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV 529
A L+ MR T +K G S IE + V F D + + L L ++ GYV
Sbjct: 533 ASLRKLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRHMKDAGYV 592
Query: 530 PNL 532
+L
Sbjct: 593 LDL 595
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 168/346 (48%), Gaps = 16/346 (4%)
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERD 148
L T LI+ Y KGS +A+ +F EMP R+V+ WT+MI+ Y SC +
Sbjct: 43 LTTDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDG 102
Query: 149 VVMWSIVISGYIES---------GDMVSARELFDKMPNRDVMSWNTLLNGYANSGD-VGS 198
V + +S +++ G +V + + N L++ YA D + +
Sbjct: 103 VKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDN 162
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV-EGDVVPNDFTLVAVLLAC 257
VFE++ +N SW LI GY L F+QM + EG++ P F++ + AC
Sbjct: 163 ARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSI--AVSAC 220
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
+ +G+ ++GK VH + G++ N+ V NA++DMY +C A +F + ++D I+WN
Sbjct: 221 ASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWN 280
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
T+I G ++ ++L +F QM + P+ TF +++AC ++ ++ G ++ H
Sbjct: 281 TLIAGFETL-DSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGII-H 338
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ +E + D+ + G + + M + V WTS++
Sbjct: 339 RGLDNNLELSNALIDMYAKCGNVADSHKIFSGM-RHTNLVSWTSMM 383
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 146/312 (46%), Gaps = 10/312 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +AR VF+ + N +W + GY+ + +F +M L+ F+ I V
Sbjct: 160 MDNARLVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQM-FMEEGELSPFSFSIAVS 218
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G+ G+QVH GF+ N + A+++MY +A ++FGEM +++ +
Sbjct: 219 ACASIGSSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTIT 278
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPE---RDVVMWSIVISGYIESGDMVSARELFDKMPN 177
W +I+ + + S + E + ++ VI+ + ++L + +
Sbjct: 279 WNTLIAGFETLDSYESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIH 338
Query: 178 R----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
R ++ N L++ YA G+V K+F M N+ SW ++ GY +G +A++
Sbjct: 339 RGLDNNLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDL 398
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMY 292
F +M+ G + P+ +AVL ACS G +D G ++ + + + ++D+
Sbjct: 399 FNEMVGSG-IKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLL 457
Query: 293 AKCGVIESAVDV 304
++ G ++ A ++
Sbjct: 458 SRAGRVKEAYEL 469
>Medtr5g008690.1 | PPR containing plant-like protein | HC |
chr5:1878296-1873339 | 20130731
Length = 764
Score = 290 bits (742), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/559 (29%), Positives = 280/559 (50%), Gaps = 50/559 (8%)
Query: 19 WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVA 78
WN + + Y D + ++ M P + +T P V+++C + G VH
Sbjct: 161 WNMVISLYVKNCLFEDAISVYRRMLSKGVIP-DDYTYPSVLKACGELLDYDSGVAVHKAI 219
Query: 79 AKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGR 138
+ KW+ F+ AL+ MY G + A ++F MP R+ V W MIS Y S G
Sbjct: 220 QESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAF 279
Query: 139 RLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW----------- 183
RL + ER++++W+ + G + +G+ A +LF +M R V+
Sbjct: 280 RLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQM--RAVIQLDSVAMVVGLNA 337
Query: 184 -----------------------------NTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
NTL+ Y+ D+ +F ++ E+ + +W
Sbjct: 338 CSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITW 397
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY-- 272
N ++ G+A R + ++ML EG V PN T+ ++L C+R+ L GK H Y
Sbjct: 398 NAMLSGFAHMDRSEEVSFLLREMLREG-VEPNYVTIASILPLCARIANLQHGKEFHCYMV 456
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
+KG + + N+L++MY++ G + A VF+ L R+D +++ +MI G + G+ A
Sbjct: 457 KREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETA 516
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMAD 392
L LF +M+ +PD VT V +L AC+H GLV G + F+ M++ Y I P++EHY CM D
Sbjct: 517 LKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVD 576
Query: 393 LLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPAN 452
L GRAGLLD+A + M +P + IW +L+GAC+ H N I E A L+E++P +
Sbjct: 577 LFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGY 636
Query: 453 FVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
+++++N+Y R A + MRD+G ++ PGC+ ++ + F + D +P + I
Sbjct: 637 YLLIANMYAAANRLDKEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEI 696
Query: 513 YRALRGLTMLLRLHGYVPN 531
++ L +L++ GY P+
Sbjct: 697 SPMMKRLNILMKDAGYAPS 715
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/483 (25%), Positives = 205/483 (42%), Gaps = 91/483 (18%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
P+ H L C+ ++ +G+Q+H G N L + LI Y++ + DA
Sbjct: 94 PIKHLLL-----GCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQI 148
Query: 109 VFGEMPERNVVVWTAMISAYI--------------------------------SCG---D 133
V + + W +IS Y+ +CG D
Sbjct: 149 VAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLD 208
Query: 134 VGSGRRLLDLAPERDVVMWSIVISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLN 188
SG + A + + WS+ + Y G + ARELFD MP RD +SWNT+++
Sbjct: 209 YDSGVAVHK-AIQESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMIS 267
Query: 189 GYANSGDVGSFEKVF----EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQM--LVEGD 242
YA+ G ++F E ERN+ WN + GG G F AL+ F QM +++ D
Sbjct: 268 CYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLD 327
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V +V L ACS +GA+ +GK +H +A + V N LI MY++C + A
Sbjct: 328 SV----AMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAY 383
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+F +D + +I+WN M++G A + + L +M +P+ VT IL C +
Sbjct: 384 LLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIA 443
Query: 363 LVRDG-----------------FLYFQSMVDHYSIIPQIEHYGCMADLLGR--------- 396
++ G L + S+V+ YS ++ + D L R
Sbjct: 444 NLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSM 503
Query: 397 ------AGLLDQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEP 447
+G + A+ +R++ ++PD V ++L AC V ++ F+ +IE+
Sbjct: 504 IMGYGVSGDGETALKLFAEMRRLNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYG 563
Query: 448 KNP 450
+P
Sbjct: 564 IDP 566
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 157/333 (47%), Gaps = 23/333 (6%)
Query: 13 EPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
E N WN + G T + + + LF++M A L+ + + + +CS GAV+ G+
Sbjct: 291 ERNIIIWNTIAGGCLHTGNFKGALKLFSQMR--AVIQLDSVAMVVGLNACSHIGAVKLGK 348
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
++H A + F + LI MYS + AY +F ++ E+ ++ W AM+S +
Sbjct: 349 EIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMD 408
Query: 133 DVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD------VMS 182
R +L E + V + ++ ++ +E M R+ ++
Sbjct: 409 RSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLL 468
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
WN+L+ Y+ SG V KVF+ + ++ ++ +I GY +G AL+ F +M +
Sbjct: 469 WNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMR-RLN 527
Query: 243 VVPNDFTLVAVLLACSRLGALDMG-----KWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
+ P+ T+VAVL+ACS G + G K + VY G + + ++D++ + G+
Sbjct: 528 IKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVY----GIDPRVEHYSCMVDLFGRAGL 583
Query: 298 IESAVDVFNCLDRRDIIS-WNTMINGLAMHGNT 329
++ A +V + + + W T+I +HGNT
Sbjct: 584 LDKAKEVITGMSCKPTSAIWATLIGACKIHGNT 616
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 175/376 (46%), Gaps = 57/376 (15%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+ L+N YA+ + + V E + WN++I Y +N F DA+ +++ML +G V
Sbjct: 131 SKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRMLSKG-V 189
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+P+D+T +VL AC L D G VH + K ++FV NAL+ MY + G +E A +
Sbjct: 190 IPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKLEVARE 249
Query: 304 VFNCLDRRDIISWNTMIN----------------------------------GLAMH-GN 328
+F+ + RD +SWNTMI+ G +H GN
Sbjct: 250 LFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGGCLHTGN 309
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSMVDHYSIIPQIEHY 387
AL LF QM+ + Q D V V L+AC+H+G V+ G ++ ++ + + +++
Sbjct: 310 FKGALKLFSQMR-AVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVFDNVKN- 367
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIE-L 445
+ + R L+ A RK+ E + W ++L G ++ E++ L + L E +
Sbjct: 368 -TLITMYSRCRDLNHAYLLFRKID-EKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGV 425
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLK-----IAMRDTGFRKLPGCSVIECNDSVVEFY 500
EP N+V +++I R ++ K + R+ F+ + +S+VE Y
Sbjct: 426 EP----NYVTIASILPLCARIANLQHGKEFHCYMVKREEQFK-----GYLLLWNSLVEMY 476
Query: 501 SLDERHPETESIYRAL 516
S + E ++ +L
Sbjct: 477 SRSGKVLEARKVFDSL 492
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 17/239 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HA +F K+ E TWNAM +G++ + +V L EM R P N+ T+ ++
Sbjct: 379 LNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEVSFLLREMLREGVEP-NYVTIASILP 437
Query: 61 SCSKAGAVREGEQVHCVAAKR--GFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
C++ ++ G++ HC KR FK L +L+EMYS G V +A KVF + ++
Sbjct: 438 LCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLVEMYSRSGKVLEARKVFDSLSRKDE 497
Query: 119 VVWTAMISAYISCGDVGSGRRL------LDLAPERDVVMWSIVISGYIESGDMVSARELF 172
V +T+MI Y GD + +L L++ P+ V M +++I+ SG + + LF
Sbjct: 498 VTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPDH-VTMVAVLIACS-HSGLVAQGQVLF 555
Query: 173 DKM-----PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS-WNVLIGGYARNG 225
KM + V ++ +++ + +G + ++V M + + W LIG +G
Sbjct: 556 RKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVITGMSCKPTSAIWATLIGACKIHG 614
>Medtr2g035620.1 | PPR containing plant protein | HC |
chr2:15068017-15065354 | 20130731
Length = 887
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 284/563 (50%), Gaps = 38/563 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+ +FD + + +WN + + S + + ++ M ++ P N TL V+ +CS
Sbjct: 240 AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRP-NGVTLASVLPACS 298
Query: 64 KAGAVREGEQVHC-VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G+++H V NSF+ AL++MY VF M R + VW
Sbjct: 299 HLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWN 358
Query: 123 AMISAYISCG-DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP----- 176
AMI+ Y+ D + +++ E + S+ +S + + V DK
Sbjct: 359 AMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPA--CVRCESFLDKEGIHSCV 416
Query: 177 -----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+D N L++ Y+ G + +F M +++ SWN +I GY GR DAL
Sbjct: 417 VKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDAL 476
Query: 232 EAFKQML-----------------VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
M + PN TL+ VL C+ L AL GK +H YA
Sbjct: 477 NLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAV 536
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
++ VG+AL+DMYAKCG + + VF + R++I+WN +I MHG +AL
Sbjct: 537 KQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALK 596
Query: 335 LFDQM----KNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
LF +M N+RE +P+ VT++ I ++ +H G+V +G F +M + I P +HY C
Sbjct: 597 LFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYAC 656
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAV-IWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
+ DLLGR+G +++A + ++ MP V W+SLLGAC+ H+N+EI E+A ++L L+P
Sbjct: 657 LVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPN 716
Query: 449 NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPE 508
+ +V+LSNIY G W ++ M++ G RK PGCS IE D V +F + D HP+
Sbjct: 717 VASYYVLLSNIYSSAGLWDQAIDVRKKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQ 776
Query: 509 TESIYRALRGLTMLLRLHGYVPN 531
++ ++ L L++ ++ GYVP+
Sbjct: 777 SKEVHEYLETLSLRMKKEGYVPD 799
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 206/469 (43%), Gaps = 32/469 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD++ + +WN+M N E V LF M P + FTL V +CS
Sbjct: 139 ARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTS-FTLVSVAHACS 197
Query: 64 K-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G+QVH + G W +F AL+ MY+ G V +A +F ++++V W
Sbjct: 198 NLINGLLLGKQVHAFVLRNG-DWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWN 256
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES---------GDMVSARELFD 173
+IS+ L + + V + ++ + + G + A L +
Sbjct: 257 TIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMN 316
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ L++ Y N VF+ M R + WN +I GY RN +A+E
Sbjct: 317 NDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIEL 376
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F +M+ E + PN TL +VL AC R + + +H G++ + +V NAL+DMY+
Sbjct: 377 FVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYS 436
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-------------- 339
+ G IE A +F ++R+DI+SWNTMI G + G DAL+L M
Sbjct: 437 RMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEHRINTFDD 496
Query: 340 ----KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
KN +P+ VT + +L C + + G V + + + D+
Sbjct: 497 YEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQM-LSKDVAVGSALVDMYA 555
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ G L+ + + +M + + + W L+ A H E A F+ ++E
Sbjct: 556 KCGCLNLSRTVFEQMSVR-NVITWNVLIMAYGMHGKGEEALKLFRRMVE 603
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 164/366 (44%), Gaps = 26/366 (7%)
Query: 45 AAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG 104
A P ++F P V+++ + + G+Q+H K G + + + + MY G +
Sbjct: 78 TAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSFVNMYGKCGDID 137
Query: 105 DAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD 164
A +VF E+ R+ V W +MI+A + L L +V S + +
Sbjct: 138 AARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGPTSFTLVSVAHACS 197
Query: 165 MVSARELFDKMPNRDVM---SWNTLLNG-----YANSGDVGSFEKVFEEMPERNVYSWNV 216
+ L K + V+ W T N YA G V + +F+ ++++ SWN
Sbjct: 198 NLINGLLLGKQVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNT 257
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ES 275
+I ++N RF +AL ML G V PN TL +VL ACS L L GK +H + +
Sbjct: 258 IISSLSQNDRFEEALLYLHVMLQSG-VRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMN 316
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
N FVG AL+DMY C E VF+ + RR I WN MI G + +A+ L
Sbjct: 317 NDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIEL 376
Query: 336 FDQMKNSRE-QPDGVTFVGILSACT-----------HMGLVRDGF---LYFQ-SMVDHYS 379
F +M P+ VT +L AC H +V+ GF Y Q +++D YS
Sbjct: 377 FVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYS 436
Query: 380 IIPQIE 385
+ +IE
Sbjct: 437 RMGRIE 442
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
F A+ + M+ G V P++F AVL A + + L++GK +H + G V N
Sbjct: 66 FHQAISTYTNMVTAG-VPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPN 124
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+ ++MY KCG I++A VF+ + RD +SWN+MIN A+ LF M P
Sbjct: 125 SFVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVGP 184
Query: 347 DGVTFVGILSACTHM 361
T V + AC+++
Sbjct: 185 TSFTLVSVAHACSNL 199
>Medtr5g012660.1 | PPR containing plant-like protein | HC |
chr5:3861054-3862731 | 20130731
Length = 519
Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 258/493 (52%), Gaps = 35/493 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA +F ++P+PN +WN + +GY + + LF ++ R+ + F+ + +C
Sbjct: 59 HAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICA-DAFSFTSAMVAC 117
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ ++ G +H K G N+ + LI+MY
Sbjct: 118 AQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYG------------------------ 153
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
CG V R+ ++DV+ W+ VI+ +G++ + MPN DV+S
Sbjct: 154 -------KCGSVERAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVS 206
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+N L+NG A +G + ++ MP N SWN +I G+ R +ALE F +M ++ +
Sbjct: 207 YNGLINGIAQAGKIEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLK-N 265
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ ++FT +L + L AL G +H G ++ VG++LIDMY+KCG + A
Sbjct: 266 LQIDEFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAE 325
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHM 361
+FN L R+++SWN MI G A +G++A A+SLF+ +K R+ +PDG+TF+ ++SAC+H
Sbjct: 326 SIFNVLSNRNLVSWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITFLNVISACSHS 385
Query: 362 GLVRD-GFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
+ + G YF +M++ Y I P I+H M L+G+ G L +A + ++ E V+W
Sbjct: 386 QIPFEMGIQYFDAMINEYGIAPSIKHCCSMIRLMGQKGELSRAQKMIHELGFESCGVVWR 445
Query: 421 SLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTG 480
SLL AC T +++ +AE+A +I LE +VMLSN+Y GRW+DV ++ M
Sbjct: 446 SLLAACGTQEDLHVAEIAAAKVIGLERDEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKR 505
Query: 481 FRKLPGCSVIECN 493
RK G S IE N
Sbjct: 506 VRKEAGSSWIEVN 518
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
TL+ Y +F E+P+ NV SWN LI GY G+F AL F + L +
Sbjct: 46 TLIKFYVKMHLFTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTK-LERSQIC 104
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
+ F+ + ++AC++L L +G +H +G N V N LIDMY KCG +E AV +
Sbjct: 105 ADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRI 164
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
F+ + +D+ISWN++I A +GN M N PD V++ G+++ G +
Sbjct: 165 FSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPN----PDVVSYNGLINGIAQAGKI 220
Query: 365 RDGFLYFQSM 374
D +M
Sbjct: 221 EDAVRILSTM 230
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 112/239 (46%), Gaps = 14/239 (5%)
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIESA 301
+ N LV ++ + L G+ +H YA GY N++V LI Y K + A
Sbjct: 1 MTKNALALVDLIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHA 60
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
++F + + +++SWNT+I+G G ALSLF +++ S+ D +F + AC +
Sbjct: 61 HNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVACAQL 120
Query: 362 GLVRDGFLYFQSMV----DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
L++ G V D+ +++ C+ D+ G+ G +++AV + + D +
Sbjct: 121 SLLKLGSSIHSKTVKLGMDNNTVVAN-----CLIDMYGKCGSVERAVRIFSDIA-DKDVI 174
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
W S++ AC + N+ L F+ L + + ++ L N G+ +D R+ M
Sbjct: 175 SWNSVIAACANNGNI---GLGFKFLQLMPNPDVVSYNGLINGIAQAGKIEDAVRILSTM 230
>Medtr5g031490.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:13515619-13513589 | 20130731
Length = 676
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 281/545 (51%), Gaps = 16/545 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP + TWN+M + + ++ + L+ M P + +T + ++ S
Sbjct: 54 ARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLP-DAYTFSAIFKAFS 112
Query: 64 KAGAVREGEQVHCVAAKRGFK-WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G REG++ H +A GF+ + F+ T +++MY+ G + DA VF + +++VV++T
Sbjct: 113 EMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFT 172
Query: 123 AMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
A+I Y G G + + + P + +V G + GD+V+ + + +
Sbjct: 173 ALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNL--GDLVNGKLIHGLVV 230
Query: 177 NRD----VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
V S +LL Y+ V KVF + + +W I G +NGR AL
Sbjct: 231 KSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALS 290
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F++M + + PN FT ++L ACS L L+ G+ +H +G GN +V ALI +Y
Sbjct: 291 MFREM-IRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLY 349
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KCG +E A VF L D++S NTMI A +G +AL LF++MK +P+ VTF+
Sbjct: 350 GKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFI 409
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
IL AC + GLV +G F + +++SI +HY CM DLLGRA ++A + +
Sbjct: 410 SILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEE-GK 468
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
PD + W +LL AC+ H VE+AE + +++ P++ ++L+NIY G+W +V +
Sbjct: 469 NPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEM 528
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
K A RD +K P S ++ + V F + D HP I L L + GY P+
Sbjct: 529 KSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDT 588
Query: 533 VDVAQ 537
V Q
Sbjct: 589 KFVLQ 593
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 87 SFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD---- 142
SF LI+ Y + +A K+F EMP R++V W +MIS+++S G L D
Sbjct: 35 SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLF 94
Query: 143 --LAPERDVVMWSIVISGYIE-----SGDMVSARELFDKMPNRDVMSWNTLLNGYANSGD 195
+ P D +S + + E G + D +++ YA G
Sbjct: 95 EGVLP--DAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGK 152
Query: 196 VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
+ VF+ + +++V + LI GY + G +ALE F+ M V + PN++TL +VL+
Sbjct: 153 MKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDM-VGSRIKPNEYTLASVLV 211
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
+C LG L GK +H G + + +L+ MY+KC ++E ++ VFN L ++
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
W + I GL +G ALS+F +M P+ TF IL AC+ + ++ G
Sbjct: 272 WTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAG 323
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 27/366 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR VFD++ + + + A+ GY+ + + +F +M + P N +TL V+
Sbjct: 153 MKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKP-NEYTLASVLV 211
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC G + G+ +H + K G + T+L+ MYS V D+ KVF + + V
Sbjct: 212 SCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVT 271
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY--------------IESGDMV 166
WT+ I G V +GR + L+ R+++ SI + + +E+G+ +
Sbjct: 272 WTSFI-----VGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQI 326
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
A + + + L++ Y G+V VFE + E +V S N +I YA+NG
Sbjct: 327 HAVTVKLGVDGNKYVD-AALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGF 385
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA---ESIGYKGNMF 283
+ALE F++M G PN T +++LLAC+ G ++ G + SI + +
Sbjct: 386 GHEALELFERMKKLGH-KPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHY 444
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+ID+ + E A + D+I W T++N +HG A +M +
Sbjct: 445 --TCMIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQA 502
Query: 344 EQPDGV 349
+ G
Sbjct: 503 PRDGGT 508
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 138/278 (49%), Gaps = 5/278 (1%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
+ L++GY + K+F+EMP R++ +WN +I + G+ +A+E + ML EG V
Sbjct: 39 HKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEG-V 97
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALIDMYAKCGVIESAV 302
+P+ +T A+ A S +G G+ H A +G++ + FV ++DMYAK G ++ A
Sbjct: 98 LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFGKMKDAR 157
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
VF+ + +D++ + +I G G +AL +F+ M SR +P+ T +L +C ++G
Sbjct: 158 FVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ +G L +V + + + + + +++ ++ + V WTS
Sbjct: 218 DLVNGKL-IHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAY-ASHVTWTSF 275
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
+ + EIA F+ +I +P +F S ++
Sbjct: 276 IVGLVQNGREEIALSMFREMIRCSI-SPNHFTFSSILH 312
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
F G+ LID Y KC VI A +F+ + R I++WN+MI+ G T +A+ L+D M
Sbjct: 36 FFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFE 95
Query: 343 REQPDGVTFVGILSACTHMGLVRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
PD TF I A + MG+ R+G + ++V + + G + D+ + G +
Sbjct: 96 GVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATG-IVDMYAKFGKMK 154
Query: 402 QAVSFVRKMPMEPDAVIWTSLL 423
A FV ++ D V++T+L+
Sbjct: 155 DA-RFVFDRVLDKDVVLFTALI 175
>Medtr1g111670.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50487581-50485585 | 20130731
Length = 630
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/494 (34%), Positives = 246/494 (49%), Gaps = 16/494 (3%)
Query: 34 DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTAL 93
DV V+ AE R + L +++ C+K+ + G H GF+ + L
Sbjct: 45 DVNVVDAESTRVS-------NLQNILQLCAKSRSSIAGRACHAQFILVGFETDILTSNML 97
Query: 94 IEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWS 153
I MYS V DA VF EMP ++VV W MI A L +
Sbjct: 98 INMYSKCSLVHDARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTLFNE 157
Query: 154 IVISGYI-ESGDMVSARELFDKMP-------NRDVMSWNTLLNGYANSGDVGSFEKVFEE 205
IS + E + E + + LL+ YA + K+FE
Sbjct: 158 FTISSVLCECAFKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFES 217
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
MPE N +W+ ++ GY +NG AL F+ + G + F + + + AC+ L L
Sbjct: 218 MPETNAVTWSSILAGYVQNGLHEAALLLFRDYQLMG-FEQDAFLISSAVCACAGLATLIE 276
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
GK VH + G+ N++V ++LIDMYAKCG I A VF + R I+ WN MI+G
Sbjct: 277 GKQVHAISCKSGFGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGR 336
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIE 385
H +A+ LF++M+ PD VT+V +L+AC+HMGL G YF MV +++ P +
Sbjct: 337 HACALEAMILFEKMQQRGLFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVL 396
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIEL 445
HY CM D+LGRAGL+ +A + +MP + IW SLL +CR H N+E AE+A +HL E+
Sbjct: 397 HYSCMVDILGRAGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGNIEFAEIAAKHLFEM 456
Query: 446 EPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDER 505
EP N N V+L+NIY +W++VA+ + +RD+ +K G S IE + + F +
Sbjct: 457 EPDNAGNHVLLANIYAANKKWEEVAKTRKLLRDSELKKDRGTSWIEIKNKIHSFTVGERN 516
Query: 506 HPETESIYRALRGL 519
HP IY L L
Sbjct: 517 HPLINEIYAKLDSL 530
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 161/335 (48%), Gaps = 12/335 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD+MP + +WN M + ++ ++LF +M R N FT+ V+ C+
Sbjct: 110 ARIVFDEMPVKSVVSWNTMIGALTRIAKEQEALMLFIQMLREGTL-FNEFTISSVLCECA 168
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ E Q+H + K N F+ TAL+ +Y+ S+ DA K+F MPE N V W++
Sbjct: 169 FKCAILECMQLHAFSIKVSVDSNCFVGTALLHVYAKCSSIKDASKMFESMPETNAVTWSS 228
Query: 124 MISAYISCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSARELF----DKM 175
+++ Y+ G + L + E+D + S + ++ +++
Sbjct: 229 ILAGYVQNGLHEAALLLFRDYQLMGFEQDAFLISSAVCACAGLATLIEGKQVHAISCKSG 288
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
++ ++L++ YA G + VF+ R++ WN +I G+ R+ +A+ F+
Sbjct: 289 FGSNIYVTSSLIDMYAKCGCIREAYIVFQGEELRSIVLWNAMISGFGRHACALEAMILFE 348
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M G + P+D T V+VL ACS +G + G K+ + + ++ + ++D+ +
Sbjct: 349 KMQQRG-LFPDDVTYVSVLNACSHMGLHEQGHKYFDLMVREHNLRPSVLHYSCMVDILGR 407
Query: 295 CGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGN 328
G++ A D+ + S W +++ +HGN
Sbjct: 408 AGLVHKAYDLIERMPFSATSSIWGSLLASCRIHGN 442
>Medtr4g014050.1 | PPR containing plant-like protein | HC |
chr4:3891221-3897546 | 20130731
Length = 935
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 265/513 (51%), Gaps = 18/513 (3%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF+ M N +W A+ G D + F+EM R+ +H T + +++ +++G
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSH-TFAVALKASAESG 266
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
+ G+ +H K+GF +++ L MYS ++FG+M +VV WT +I
Sbjct: 267 LLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIM 326
Query: 127 AYISCGDVGSG------RRLLDLAPERDVVMWSIVISG-----YIESGDMVSARELFDKM 175
Y+ GD R D++P ++ VIS + G+ + L ++
Sbjct: 327 TYVQMGDEERALDAFKRMRKSDVSPNE--YTFASVISACANLAITKWGEQIHGHAL--RL 382
Query: 176 PNRDVMS-WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
D +S N+++ Y+ G + VF+ M +++ SW+ +I Y + +A
Sbjct: 383 GLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYL 442
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
M EG PN+F L +VL C + L+ GK VH YA IG V +ALI MY++
Sbjct: 443 SWMSREGPK-PNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSR 501
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G ++ A +F+ + DI+SW MING A HG + +A+SLF+ + + PD VTF+GI
Sbjct: 502 SGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGI 561
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+AC H GLV GF Y++ M + Y I P EHYGC+ DLL RAG L +A VR MP
Sbjct: 562 LTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPC 621
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D V+W++LL ACR H +++ A A + ++ L P + + L+NIY GR ++ A ++
Sbjct: 622 DDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRREEAAHVRK 681
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHP 507
M+ G K PG S I ND + F + + HP
Sbjct: 682 LMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHP 714
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 207/452 (45%), Gaps = 21/452 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +F+KM + +W + GY + + ++LF+ M + + F + + +++C+
Sbjct: 103 ARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACA 162
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V GE +H + K G + F+ +AL++MY G VF M RNVV WTA
Sbjct: 163 LGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTA 222
Query: 124 MISAYISCGDVGSGRRLLDL---------APERDVVMWSIVISGYIESGDMVSARELFDK 174
+I + G G + V + + SG + G + A+ +
Sbjct: 223 VIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQG 282
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
N NTL Y+ ++F +M +V SW LI Y + G AL+AF
Sbjct: 283 F-NETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAF 341
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K+M + DV PN++T +V+ AC+ L G+ +H +A +G + V N++I +Y+K
Sbjct: 342 KRMR-KSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSK 400
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG+++ A VF+ + R+DIISW+T+I+ + +A + M +P+ +
Sbjct: 401 CGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASV 460
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEH----YGCMADLLGRAGLLDQAVSFVRKM 410
LS C M L+ G V Y++ ++H + + + R+G L +A +
Sbjct: 461 LSVCGSMALLEPG-----KQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSI 515
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
D V WT+++ H + A F+++
Sbjct: 516 K-NNDIVSWTAMINGYAEHGYSQEAISLFENI 546
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 158/375 (42%), Gaps = 31/375 (8%)
Query: 101 GSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRL-----LDLAPERDVVMWSIV 155
G + +A +F +M R+ + WT +I+ Y++ + L +D ++D + S+
Sbjct: 98 GKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVA 157
Query: 156 ISG-----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERN 210
+ + G+++ + + N +S + L++ Y G VFE M RN
Sbjct: 158 LKACALGMNVYFGELLHGFSVKSGLINSVFVS-SALVDMYMKVGKTEQGCSVFENMTTRN 216
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
V SW +I G G D L F +M V + T L A + G L GK +H
Sbjct: 217 VVSWTAVIVGLVHAGCSLDGLSYFSEMW-RSKVGYDSHTFAVALKASAESGLLHYGKAIH 275
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
G+ +V N L MY+KC + + +F + D++SW +I G+
Sbjct: 276 AQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEE 335
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR-----DGFLYFQSMVDHYSIIPQIE 385
AL F +M+ S P+ TF ++SAC ++ + + G +VD S+ I
Sbjct: 336 RALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSI- 394
Query: 386 HYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA-CRTHKNVEIAELAFQHL-- 442
L + GLL +A S V D + W++++ C+ A+ AF +L
Sbjct: 395 -----ITLYSKCGLLQEA-SLVFDGMTRKDIISWSTIISVYCQGSH----AKEAFNYLSW 444
Query: 443 IELEPKNPANFVMLS 457
+ E P F + S
Sbjct: 445 MSREGPKPNEFALAS 459
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
N+ L G + +F +M R+ SW LI GY ++AL F M V+ +
Sbjct: 88 NSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGL 147
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
+ F + L AC+ + G+ +H ++ G ++FV +AL+DMY K G E
Sbjct: 148 QKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCS 207
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
VF + R+++SW +I GL G + D LS F +M S+ D TF L A GL
Sbjct: 208 VFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGL 267
Query: 364 VRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+ G ++ Q++ ++ + + + + D + KM PD V WT+L
Sbjct: 268 LHYGKAIHAQTIKQGFNETAYV--VNTLGTMYSKCRKPDYVMRLFGKMST-PDVVSWTNL 324
Query: 423 L 423
+
Sbjct: 325 I 325
>Medtr4g088840.1 | pentatricopeptide (PPR) repeat protein | HC |
chr4:35446469-35444694 | 20130731
Length = 591
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 216/343 (62%), Gaps = 3/343 (0%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
YA S + KVF++MP+R+V +WN +I GY NG ++A+ F++M E V P+ T
Sbjct: 161 YAKSSALCVARKVFDKMPQRSVVAWNTMISGYEHNGLANEAMTLFRKM-NEMGVCPDSAT 219
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
V+V ACS++G+L++G WV+ S G + N+ +G +LI+M+++CG + A VF+ +
Sbjct: 220 FVSVSSACSQIGSLELGCWVYDSIVSNGIRVNVILGTSLINMFSRCGDVRRARAVFDSIS 279
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGVTFVGILSACTHMGLVRDGF 368
++I+W MI+G MHG +A+ LF +MK R P+ VTFV +LSAC H GL+ +G
Sbjct: 280 EGNVIAWTAMISGYGMHGYGVEAMELFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGR 339
Query: 369 LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM-PMEPDAVIWTSLLGACR 427
F SM + Y ++P +EH+ CM D+LG+AGLL +A F++++ P+E +WT++LGAC+
Sbjct: 340 QVFASMREEYGLVPGLEHHVCMVDMLGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACK 399
Query: 428 THKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGC 487
HKN ++ A QHLI LEP+NP+N+V+LSN+Y GR V ++ M G +K G
Sbjct: 400 MHKNYDLGVEAAQHLISLEPENPSNYVLLSNMYALAGRMDRVESVRNVMIQRGIKKQAGY 459
Query: 488 SVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVP 530
S I+ N+ F D+ HPET IY+ L GL + GY P
Sbjct: 460 SSIDVNNKTYLFRMGDKAHPETNEIYQYLDGLIWRCKEAGYAP 502
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 12/339 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ + R++F + +P++ +N++ S D + + M + P + +T V +
Sbjct: 66 IAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHKP-SSYTFTSVFK 124
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ A++ G +H GF NSF+ A++ Y+ ++ A KVF +MP+R+VV
Sbjct: 125 ACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRSVVA 184
Query: 121 WTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W MIS Y G R++ ++ D + V S + G + ++D +
Sbjct: 185 WNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYDSIV 244
Query: 177 NR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ +V+ +L+N ++ GDV VF+ + E NV +W +I GY +G +A+E
Sbjct: 245 SNGIRVNVILGTSLINMFSRCGDVRRARAVFDSISEGNVIAWTAMISGYGMHGYGVEAME 304
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV-YAESIGYKGNMFVGNALIDM 291
F +M E +VPN T VAVL AC+ G + G+ V E G + ++DM
Sbjct: 305 LFYEMKKERGLVPNTVTFVAVLSACAHAGLIHEGRQVFASMREEYGLVPGLEHHVCMVDM 364
Query: 292 YAKCGVIESAVDVFN--CLDRRDIISWNTMINGLAMHGN 328
K G++ A C W M+ MH N
Sbjct: 365 LGKAGLLTEAYQFIKELCPVEHVPAVWTAMLGACKMHKN 403
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 147/297 (49%), Gaps = 8/297 (2%)
Query: 193 SGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVA 252
+G + ++F + + + + +N LI +++G D + +++ML P+ +T +
Sbjct: 63 AGSIAYTRRLFLSVTDPDSFLFNSLIKASSQHGFSLDTIFFYRRMLSSPHK-PSSYTFTS 121
Query: 253 VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRD 312
V AC+ L AL +G +H + G+ N FV A++ YAK + A VF+ + +R
Sbjct: 122 VFKACAHLSALKIGTILHSHVFVSGFGSNSFVQAAIVAFYAKSSALCVARKVFDKMPQRS 181
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+++WNTMI+G +G +A++LF +M PD TFV + SAC+ +G + G +
Sbjct: 182 VVAWNTMISGYEHNGLANEAMTLFRKMNEMGVCPDSATFVSVSSACSQIGSLELGCWVYD 241
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHK-N 431
S+V + I + + ++ R G + +A + + E + + WT+++ H
Sbjct: 242 SIVSN-GIRVNVILGTSLINMFSRCGDVRRARAVFDSIS-EGNVIAWTAMISGYGMHGYG 299
Query: 432 VEIAELAFQHLIE--LEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPG 486
VE EL ++ E L P N FV + + G + ++ +MR+ + +PG
Sbjct: 300 VEAMELFYEMKKERGLVP-NTVTFVAVLSACAHAGLIHEGRQVFASMREE-YGLVPG 354
>Medtr7g053240.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:18723182-18719939 | 20130731
Length = 881
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 163/499 (32%), Positives = 271/499 (54%), Gaps = 14/499 (2%)
Query: 1 MGHARKVFDKMPE-PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+G + F +M + W +M + ++ + + LF M R P + +
Sbjct: 388 VGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELFTVMLREGVKPDEY----CIG 443
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
S ++ G QVH K G N+ + +L MYS G + ++Y+VF + ++ V
Sbjct: 444 SLLSIMSSLSLGSQVHSYILKAGLVTNATVGCSLFTMYSKCGCLEESYEVFQQAIVKDNV 503
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSI-VISGYIESGDMV---SAREL---- 171
W +MIS ++ G RL ++VV I +IS D+ + RE+
Sbjct: 504 SWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISILTACADLRLLRTGREIHGST 563
Query: 172 FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
F + + L+N Y+ G + KVF+ +P ++ ++ + L+ GYA+NG ++
Sbjct: 564 FRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDAFACSSLVSGYAQNGLIEESF 623
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F ML + V + FT+ ++L A S L D+G +H Y E +G + ++ VG++L+ M
Sbjct: 624 LLFHDMLRNDETV-DAFTITSILGAASLLCQSDIGTQLHAYIEKLGLQADVSVGSSLLTM 682
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y+KCG IE F+ +++ D+I W ++I A HG ADAL+ ++ MK+ +PD VTF
Sbjct: 683 YSKCGSIEDCRKAFDDVEKPDLIGWTSLILSYAQHGKGADALAAYELMKSEGVEPDAVTF 742
Query: 352 VGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
VGILSAC+H GLV + F Y SM++ Y I P HY C+ D+LGR+G L +A SF+ MP
Sbjct: 743 VGILSACSHSGLVEEAFFYLNSMIEDYKITPSHRHYACIVDILGRSGRLREAESFINNMP 802
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVAR 471
+EP+A+IW +LL AC+ H + E+ +LA + ++ LEP + +V SNI D +W++V +
Sbjct: 803 VEPNALIWGTLLAACKVHGDFELGKLAAEKVMGLEPSDVGAYVSFSNICADGEQWEEVTK 862
Query: 472 LKIAMRDTGFRKLPGCSVI 490
++ ++ TG +K P SV+
Sbjct: 863 IRSSLNKTGMKKEPAWSVV 881
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 134/464 (28%), Positives = 222/464 (47%), Gaps = 48/464 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + F+ N A+WNA+ + ++ + LF+EM RA+ P N +T P ++ +C
Sbjct: 190 ALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEMCRASLMP-NSYTFPSILTACC 248
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ G+ VH +A K G + F+ TA++++Y+ G + +AY+ F +M +NVV WTA
Sbjct: 249 ALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVSWTA 307
Query: 124 MISAYISCGDVGSGRRLL----DLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
+IS ++ D +L + E + + V+S + + A+++ +
Sbjct: 308 IISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEAKQIHSLVLKLG 367
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAF 234
+V L+N YA G VG E F EM ++ W ++ +A+N ALE F
Sbjct: 368 LILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFAQNRNSGRALELF 427
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
ML EG V P+++ + ++L S + +L +G VH Y G N VG +L MY+K
Sbjct: 428 TVMLREG-VKPDEYCIGSLL---SIMSSLSLGSQVHSYILKAGLVTNATVGCSLFTMYSK 483
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG +E + +VF +D +SW +MI+G HG AL LF +M PD +T + I
Sbjct: 484 CGCLEESYEVFQQAIVKDNVSWASMISGFVEHGYPDQALRLFKEMLYQEVVPDHITLISI 543
Query: 355 LSACTHMGLVRDGFLYFQS---------------MVDHYS-------------IIPQIEH 386
L+AC + L+R G S +V+ YS I+P +
Sbjct: 544 LTACADLRLLRTGREIHGSTFRLGLGTNTVVGGALVNMYSKCGSLSLARKVFDILPHKDA 603
Query: 387 YGCMADLLGRA--GLLDQAVSFVRKMPMEP---DAVIWTSLLGA 425
+ C + + G A GL++++ M DA TS+LGA
Sbjct: 604 FACSSLVSGYAQNGLIEESFLLFHDMLRNDETVDAFTITSILGA 647
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 161/359 (44%), Gaps = 48/359 (13%)
Query: 115 ERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+ + ++I Y D+ +L D + +V W+++ISGY+ + + + E+F +
Sbjct: 67 QSGIFFMDSLIGLYCKSSDMVLAHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCR 126
Query: 175 MP----NRDVMSWNTLL---------------------NGYANSGDVGS----------- 198
M D S+ ++L NG+ +SG V +
Sbjct: 127 MHLFGFEPDEFSYGSVLSACVALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCN 186
Query: 199 FE---KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLL 255
F + F + NV SWN +I +NG AL F +M ++PN +T ++L
Sbjct: 187 FSEALRFFNDASCDNVASWNAIISLAVKNGENQVALNLFSEM-CRASLMPNSYTFPSILT 245
Query: 256 ACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS 315
AC L + +GK VH A G ++FV A++D+YAK G + A F+ + ++++S
Sbjct: 246 ACCALKEMQIGKGVHGLAIKCG-ATDVFVETAIVDLYAKFGCMSEAYRQFSQMQVQNVVS 304
Query: 316 WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMV 375
W +I+G +T AL LF M+ + + T +LSAC L+ + S+V
Sbjct: 305 WTAIISGFVQQDDTTFALKLFKDMRQIGHEINAYTVTSVLSACAKPELIEEA-KQIHSLV 363
Query: 376 DHYSIIPQIEHYGCMADL---LGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKN 431
+I ++ + ++ +G GL + A S ++ M D IW S+L + ++N
Sbjct: 364 LKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNM---KDPGIWASMLSSFAQNRN 419
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 195/500 (39%), Gaps = 118/500 (23%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD + +P+ +WN M +GY + +F M+ P + F+ V+ +C
Sbjct: 89 AHKLFDTITQPSIVSWNVMISGYVRNSMFLKSLEMFCRMHLFGFEP-DEFSYGSVLSACV 147
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A G QV + K GF + ++ T +++M+ + +A + F +
Sbjct: 148 ALQASMFGLQVFSLVVKNGFLSSGYVQTQMVDMFCKNCNFSEALRFFNDA---------- 197
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK------MPN 177
SC +V S W+ +IS +++G+ A LF + MPN
Sbjct: 198 ------SCDNVAS---------------WNAIISLAVKNGENQVALNLFSEMCRASLMPN 236
Query: 178 R--------------------------------DVMSWNTLLNGYANSGDVGSFEKVFEE 205
DV +++ YA G + + F +
Sbjct: 237 SYTFPSILTACCALKEMQIGKGVHGLAIKCGATDVFVETAIVDLYAKFGCMSEAYRQFSQ 296
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
M +NV SW +I G+ + + AL+ FK M G + N +T+ +VL AC++ ++
Sbjct: 297 MQVQNVVSWTAIISGFVQQDDTTFALKLFKDMRQIGHEI-NAYTVTSVLSACAKPELIEE 355
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DRRDIISWNTMINGLA 324
K +H +G N+ VG AL++MYAK G + + F+ + + +D W +M++ A
Sbjct: 356 AKQIHSLVLKLGLILNVKVGAALVNMYAKIGGVGLSELAFSEMKNMKDPGIWASMLSSFA 415
Query: 325 MHGNTADALSLFDQMKNSREQPD-----------------------------------GV 349
+ N+ AL LF M +PD G
Sbjct: 416 QNRNSGRALELFTVMLREGVKPDEYCIGSLLSIMSSLSLGSQVHSYILKAGLVTNATVGC 475
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
+ + S C G + + + FQ +I+ + M G DQA+ ++
Sbjct: 476 SLFTMYSKC---GCLEESYEVFQQ-----AIVKDNVSWASMISGFVEHGYPDQALRLFKE 527
Query: 410 MPME---PDAVIWTSLLGAC 426
M + PD + S+L AC
Sbjct: 528 MLYQEVVPDHITLISILTAC 547
>Medtr2g048855.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:21642144-21644166 | 20130731
Length = 625
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/507 (32%), Positives = 275/507 (54%), Gaps = 22/507 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ HAR +FD + + +W ++ +GY+ ++ + LF EM P N FTL V++
Sbjct: 104 LSHARHLFDSLHVKDVISWTSLISGYTRSDLPHQSISLFYEMLAFPVQP-NAFTLSSVIK 162
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM-PERNVV 119
+CS V G H + RGF WN+ + +LI+MY +V DA +VF E+ + +V
Sbjct: 163 ACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVF 222
Query: 120 VWTAMISAYI-------SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
WT++IS + S R+ + P D + +++ G + +E+
Sbjct: 223 CWTSIISCFTRNDMFKESLKFFYVMNRVRGVVP--DGYTFGTILTACANLGLLRQGKEVH 280
Query: 173 DKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRF 227
K+ +V+ ++LL+ Y G V VFE + E+N SW ++G Y +N +
Sbjct: 281 GKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEY 340
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+ L+ ++ GD+ N + VL ACS L A++ GK VH G ++ + +A
Sbjct: 341 QNVLDLVRE---RGDL--NFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESA 395
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+D+YAKCG+++ A +F ++ R++I+WN+M++G A +G +AL+LF+ M +PD
Sbjct: 396 LVDLYAKCGMVDFACTMFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKPD 455
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
+TFV +L AC+H GLV +G F +++ Y I P +EHY CM DLLGRAG +D+A +
Sbjct: 456 SITFVAVLFACSHAGLVDEGRKVF-TLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLL 514
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
D +W +LLGAC + AE + +IELEP ++V+L+NIY+++GRW
Sbjct: 515 ENADCRYDKSLWAALLGACTKCSDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWD 574
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECND 494
D ++ M D G +K+ G S I+ +
Sbjct: 575 DALEIRKLMEDRGVKKMAGKSWIDSQN 601
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 12/247 (4%)
Query: 200 EKVFEEMPERNVYSW---NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+K+ +P + +S+ + I + + G S A+ + P + A LL
Sbjct: 2 KKLHHHLPVKQTHSFISTDSEILHHLKTGSLSHAIHLLNTSQPTLSLKP---VIYASLLQ 58
Query: 257 CS-RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV---IESAVDVFNCLDRRD 312
S + + G VH + G + FVGN+L+ +Y K + A +F+ L +D
Sbjct: 59 TSVKTNSFHHGASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKD 118
Query: 313 IISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQ 372
+ISW ++I+G ++SLF +M QP+ T ++ AC+ + V G F
Sbjct: 119 VISWTSLISGYTRSDLPHQSISLFYEMLAFPVQPNAFTLSSVIKACSALNDVNLGRC-FH 177
Query: 373 SMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNV 432
SMV + D+ G +D A ++ ++ D WTS++ +C T ++
Sbjct: 178 SMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCWTSII-SCFTRNDM 236
Query: 433 EIAELAF 439
L F
Sbjct: 237 FKESLKF 243
>Medtr5g043780.1 | PPR containing plant-like protein | HC |
chr5:19239453-19241320 | 20130731
Length = 525
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/509 (30%), Positives = 277/509 (54%), Gaps = 50/509 (9%)
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG----SVGDAYKVFGEMPERNVV 119
K +++ +Q H G + N+F + ++ S+ S+ A +VF ++ V
Sbjct: 14 KCKSMKHLKQAHAQVFTTGLENNTFALSRVLAFCSSHKHHHESLTYACRVFEQIQNPTVC 73
Query: 120 VWTAMISAYISCGDVGSGRRLL------DLAPER-------------------------- 147
++ +I A++ S ++ +L P+
Sbjct: 74 IYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYS 133
Query: 148 -------DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
D+ + + +++ Y GD+V+AR +FD++P+ +V+SW+ +++GYA GDV S
Sbjct: 134 SKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSAR 193
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
F+E PE++ W +I GY +N F ++L F+ M + D+VP++ V++L AC+ L
Sbjct: 194 LFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLT-DIVPDESIFVSILSACAHL 252
Query: 261 GALDMGKWVHVYAESIGYKG-NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
GAL++G W+H + + ++ + +L+DMYAKCG +E A +F+ ++ RD++ WN M
Sbjct: 253 GALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMNMRDVVCWNAM 312
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I+G+AMHG+ AL LF M+ +PD +TF+ + +AC++ G+ +G + M Y+
Sbjct: 313 ISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYN 372
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM----EPDAVIWTSLLGACRTHKNVEIA 435
I+P+ EHYGC+ DLL RAGL ++A+ +RK+ + + W + L AC H ++A
Sbjct: 373 IVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLA 432
Query: 436 ELAFQHLIELEPK-NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECND 494
ELA + +++L+ + +V+LSN+Y G+ D R++ M+ G K PGCS +E +
Sbjct: 433 ELAAEKVLQLDNHIHSGVYVLLSNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDG 492
Query: 495 SVVEFYSLDERHPETESIYRALRGLTMLL 523
+ EF + ++ HP+ E I+ L+ + M L
Sbjct: 493 VISEFIAGEKTHPQMEEIHSVLKKMHMQL 521
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 172/379 (45%), Gaps = 56/379 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +VF+++ P +N + + + + + +F +M ++ P N +T+P V++
Sbjct: 57 LTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDN-YTIPYVLK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C G+ +H ++K G ++ ++ +L+ MY G V A VF E+P NVV
Sbjct: 116 ACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVS 175
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W+ MIS Y GDV S R D APE+D +W +ISGY+++ + LF M D+
Sbjct: 176 WSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDI 235
Query: 181 MS----------------------W------------------NTLLNGYANSGDVGSFE 200
+ W +LL+ YA G++ +
Sbjct: 236 VPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAK 295
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
++F+ M R+V WN +I G A +G AL+ F M G V P+D T +AV ACS
Sbjct: 296 RLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVG-VKPDDITFIAVFTACSYS 354
Query: 261 GA-----LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDR----- 310
G + + K VY +I K + L+D+ ++ G+ E A+ + +
Sbjct: 355 GMAYEGLMLLDKMCSVY--NIVPKSEHY--GCLVDLLSRAGLFEEAMVMIRKITNSWNGS 410
Query: 311 RDIISWNTMINGLAMHGNT 329
+ ++W ++ HG T
Sbjct: 411 EETLAWRAFLSACCNHGET 429
>Medtr5g013950.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:4606693-4603955 | 20130731
Length = 735
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 169/516 (32%), Positives = 267/516 (51%), Gaps = 37/516 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++F MPE N +W AM G++ +R+ ++LF +M + A N T +V +C+
Sbjct: 246 AFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACA 305
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCT---ALIEMYSAKGSVGDAYKVF-GEMPERNVV 119
G G+Q+H +K + + C +L+ MYS G + A VF G+M +
Sbjct: 306 GMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMDSARSVFEGDMKNCDDQ 365
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
+ +MI+ Y+ G + + L D P R+ + W+ +ISGY+ +G ++ A LFD MP+ D
Sbjct: 366 SFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSD 425
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
++ +W ++I GY +N ++A+ F +M+
Sbjct: 426 -----------------------------KDSIAWTLMIYGYVQNELIAEAINLFAEMMA 456
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI--GYKGNMFVGNALIDMYAKCGV 297
+G P + T + A + LD+G +H Y+ ++++ N+LI MYAKCG
Sbjct: 457 QG-ASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKCGE 515
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
IE A +F+ ++ RD ISWN+MI GL+ HG +AL++++ M PD VTF+G+L+A
Sbjct: 516 IEDAYRIFSNMNCRDKISWNSMIMGLSDHGRANEALNMYETMLEFGVYPDAVTFLGVLTA 575
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C H G V G F M++ Y++ P +EHY + ++LGRAG + A FV ++P+EP+
Sbjct: 576 CAHAGFVDKGCELFSVMLNDYALQPGLEHYVSIINILGRAGRVKDAEEFVLRLPVEPNHT 635
Query: 418 IWTSLLGACRTHK-NVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
IW +L+G C K + +IA A L+EL+P N V L NIY R + L+ M
Sbjct: 636 IWGALIGVCGLSKTDADIARRAATRLLELDPLNAPGHVTLCNIYAANDRHLEETSLRREM 695
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESI 512
R G RK PGCS I V F S D P E +
Sbjct: 696 RMKGVRKAPGCSWILVKGKVHAFSSGDRLDPLAEEM 731
Score = 199 bits (505), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 185/363 (50%), Gaps = 52/363 (14%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
AR +FD MP N T+NAM + Y + R F +M
Sbjct: 90 QARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDM-------------------- 129
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ W TA++ Y+ G + DA KVF EMPERNVV W
Sbjct: 130 ---------------PERNVVSW-----TAMLSGYAGLGWIDDARKVFDEMPERNVVSWN 169
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
+M+ I GD+ R++ D P+++VV W+ +I GY+E+G M A++LFD++ R+V++
Sbjct: 170 SMVVGLIRNGDLEEARKVFDDTPDKNVVSWNAMIEGYVENGRMDDAKDLFDQIECRNVIT 229
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
W ++++GY GDV ++F+ MPE+NV SW +IGG+A NG + +AL F M+ D
Sbjct: 230 WTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSD 289
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF---VGNALIDMYAKCGVIE 299
PN+ T V+++ AC+ +G +GK +H +K + + +G +L+ MY+ CG+++
Sbjct: 290 AKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRWKLDDYDCRLGRSLVRMYSVCGLMD 349
Query: 300 SAVDVF-----NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
SA VF NC D+ S+N+MING G A LFD + + G
Sbjct: 350 SARSVFEGDMKNCDDQ----SFNSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGY 405
Query: 355 LSA 357
LSA
Sbjct: 406 LSA 408
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 163/325 (50%), Gaps = 57/325 (17%)
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
T+++ Y+ G V A +F MP RN+V + AM+SAY+ G +R D PER+VV
Sbjct: 76 TSMLTNYAKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVV 135
Query: 151 MWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERN 210
W+ ++SGY G + AR++FD+MP R+V+SWN+++ G +GD+ KVF++ P++N
Sbjct: 136 SWTAMLSGYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDTPDKN 195
Query: 211 VYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH 270
V SWN +I GY NGR DA + F Q + C
Sbjct: 196 VVSWNAMIEGYVENGRMDDAKDLFDQ------------------IECR------------ 225
Query: 271 VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTA 330
N+ ++I Y + G + A +F + ++++SW MI G A +G
Sbjct: 226 ----------NVITWTSMISGYCRVGDVNEAFRLFQIMPEKNVVSWTAMIGGFAWNGFYR 275
Query: 331 DALSLF-DQMKNSREQPDGVTFVGILSACTHMGLVRDGF-LYFQSMVDHYSIIPQIEHYG 388
+AL LF D M S +P+ TFV ++ AC MG G L+ Q +++ + +++ Y
Sbjct: 276 EALLLFLDMMTLSDAKPNEETFVSLVYACAGMGFPCLGKQLHAQMILNRW----KLDDYD 331
Query: 389 CMADLLGRA--------GLLDQAVS 405
C LGR+ GL+D A S
Sbjct: 332 CR---LGRSLVRMYSVCGLMDSARS 353
>Medtr3g011920.1 | PPR containing plant-like protein | HC |
chr3:3106602-3104668 | 20130731
Length = 627
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 150/424 (35%), Positives = 245/424 (57%), Gaps = 9/424 (2%)
Query: 89 LCTALIEMYSAKGSVGDAYKVFGEM----PERNVVVWTAMISAYISCGDVGSGRRLLDLA 144
L T +I +S + DA +F M N + +++ G VG G+++ A
Sbjct: 127 LVTEIITSFSKQSRHEDAIYLFSRMLASTIRPNEFTFGTVLNTSTRLGKVGVGKQIHGCA 186
Query: 145 PE----RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
+ +V + S ++ Y++ + A++ F+ +V+S+ TL+ GY SG
Sbjct: 187 IKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYTTLIGGYLKSGRFEDAL 246
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
+VF EMPERNV SWN ++GG ++ G +A++ F ML EG +PN+ T + A S +
Sbjct: 247 RVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREG-FIPNESTFPCAISAASNI 305
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
+L G+ H A K N FVGN+LI YAKCG ++ ++ +F+ + +R+++SWN +I
Sbjct: 306 ASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIFDKICKRNVVSWNAVI 365
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
G A +G A+A+SLF++M + +P+ V+ +G+L AC H GLV +GFLYF
Sbjct: 366 CGYAHNGRGAEAISLFERMCSEGIKPNKVSLLGLLLACNHAGLVDEGFLYFNKARIESPN 425
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
+ + EHY CM DLL R+G +A +F+R+MP P W ++LG C+ H N+E+ ELA +
Sbjct: 426 LLKPEHYACMVDLLARSGRFTEAQNFIRRMPFNPGIGFWKAILGGCQIHHNIELGELAAK 485
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFY 500
+++ L+P + +++VM+SN + GRW DVARL+ +++ G +++PG S IE V F
Sbjct: 486 NILALDPDDVSSYVMMSNAHSAAGRWSDVARLRTEIQEKGMKRIPGSSWIEVKGKVHAFL 545
Query: 501 SLDE 504
DE
Sbjct: 546 KADE 549
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 142/303 (46%), Gaps = 42/303 (13%)
Query: 4 ARKVFDKMPEPNTATW-NAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
A +FD+MPE T + +S H D + LF+ M + P N FT V+ +
Sbjct: 112 ACNMFDEMPELLTVGLVTEIITSFSKQSRHEDAIYLFSRMLASTIRP-NEFTFGTVLNTS 170
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ G V G+Q+H A K N F+ +AL+++Y S+ +A K F + NVV +T
Sbjct: 171 TRLGKVGVGKQIHGCAIKTSLCSNVFVGSALVDLYVKLSSIEEAQKAFEDTEYPNVVSYT 230
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
+I Y+ G R+ + PER+V+ W+ ++ G + G A + F M P
Sbjct: 231 TLIGGYLKSGRFEDALRVFNEMPERNVISWNAMVGGCSKIGHNEEAVKFFIDMLREGFIP 290
Query: 177 NRDVMSW---------------------------------NTLLNGYANSGDVGSFEKVF 203
N N+L++ YA G + +F
Sbjct: 291 NESTFPCAISAASNIASLGFGRSFHACAIKFLGKLNDFVGNSLISFYAKCGSMKDSLLIF 350
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+++ +RNV SWN +I GYA NGR ++A+ F++M EG + PN +L+ +LLAC+ G +
Sbjct: 351 DKICKRNVVSWNAVICGYAHNGRGAEAISLFERMCSEG-IKPNKVSLLGLLLACNHAGLV 409
Query: 264 DMG 266
D G
Sbjct: 410 DEG 412
>Medtr4g007160.1 | PPR containing plant-like protein | HC |
chr4:976511-978646 | 20130731
Length = 595
Score = 285 bits (729), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 165/517 (31%), Positives = 264/517 (51%), Gaps = 69/517 (13%)
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
+T+P V++SC++ + E +Q+H +A K + F+ + + +YS
Sbjct: 110 YTVPAVLKSCARFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYSI------------- 156
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
CGD ++ D P RDVV W+ +ISGY+++G A LF
Sbjct: 157 ------------------CGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALF 198
Query: 173 DKM---PN---------------------------------RDVMSWNTLLNGYANSGDV 196
+M PN ++++ NTL++ Y V
Sbjct: 199 LRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESV 258
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+++F+E+PE+++ SW +I G + ++L+ F +ML G P+ L +VL A
Sbjct: 259 TDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSG-FEPDGVILTSVLSA 317
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+ LG LD G+WVH Y + K ++ +G +LIDMYAKCG IE A +FN L ++I +W
Sbjct: 318 CASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTW 377
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N I GLA++G+ +AL F + S +P+ +TF+ + SAC H GLV +G YF+ M
Sbjct: 378 NAYIGGLAINGHGQEALKQFGYLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTS 437
Query: 377 -HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIA 435
Y++ P +EHYGCM DLL RA L+++A+ + KMPM PD I +LL A T+ NVE+
Sbjct: 438 PPYNLSPWLEHYGCMVDLLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELT 497
Query: 436 ELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDS 495
+ + E + +V+LSN Y + +W +V ++ M++ G K PG S+I +
Sbjct: 498 PEMLKTVRNFECQESGVYVLLSNWYANNKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGK 557
Query: 496 VVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
+F D HP++E I+ L L L G++ L
Sbjct: 558 SHKFVVGDNNHPQSEDIHVLLNILANQTYLEGHIDTL 594
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A KVFD MP + +W + +GY D V LF M+ A A T ++ +C
Sbjct: 163 ASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVALFLRMDVAPNAA----TFVSILGACG 218
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K G + G+ +H + +K + L++MY SV DA ++F E+PE+++V WT+
Sbjct: 219 KLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDMYVKCESVTDAKRLFDEIPEKDIVSWTS 278
Query: 124 MISAYISCGDVGSGRRLLDL-------APERDVVMWSIVISGYIESGDMVSARELFDKMP 176
MIS + + LDL E D V+ + V+S G + R + + +
Sbjct: 279 MISGLV---QYQCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYID 335
Query: 177 NR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ DV +L++ YA G + +++F +P +N+ +WN IGG A NG +AL+
Sbjct: 336 HSRIKWDVHIGTSLIDMYAKCGCIEMAQQMFNLLPSKNIRTWNAYIGGLAINGHGQEALK 395
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN--ALID 290
F LVE PN+ T +AV AC G +D G+ S Y + ++ + ++D
Sbjct: 396 QFG-YLVESGTRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVD 454
Query: 291 MYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
+ + ++E A+++ N + D+ +++ + +GN + ++N Q GV
Sbjct: 455 LLCRAELVEEAMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGV 514
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 20/262 (7%)
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
N++I GY G F A + +V VP+ +T+ AVL +C+R + K +H A
Sbjct: 78 NLIISGYGA-GNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAV 136
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALS 334
+MFV N+ + +Y+ CG A VF+ + RD++SW +I+G G DA++
Sbjct: 137 KTDLWCDMFVQNSFVHVYSICGDTVGASKVFDFMPVRDVVSWTGLISGYMKAGLFNDAVA 196
Query: 335 LFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
LF +M + P+ TFV IL AC +G + G +V Y ++ + D+
Sbjct: 197 LFLRMDVA---PNAATFVSILGACGKLGCLNLG-KGIHGLVSKYPHGKELVVSNTLMDMY 252
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAELAFQHLIE-LEPKNPAN 452
+ + A ++P E D V WTS++ G + E +L ++ L EP
Sbjct: 253 VKCESVTDAKRLFDEIP-EKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSGFEPDG--- 308
Query: 453 FVMLSNIYK--------DLGRW 466
V+L+++ D GRW
Sbjct: 309 -VILTSVLSACASLGLLDYGRW 329
>Medtr1g112500.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:50925869-50923259 | 20130731
Length = 710
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/520 (31%), Positives = 272/520 (52%), Gaps = 25/520 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VF+ M E +WN + NG D + +++ M ++ T+ V+++C
Sbjct: 168 ARLVFELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVG-VDCATVVSVLQACG 226
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
V G +V + ++G+ N + AL++MY G + +A + M E++VV WT
Sbjct: 227 VLKNVELGREVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTT 286
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARE-------LFDKM 175
+I+ Y+ GD S L V + ++ + + GD+VS + +
Sbjct: 287 LINGYVVNGDARSALMLCRSMQLEGVKPNLVSVASLLSACGDLVSLKHGKCLHAWAIRQN 346
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+V+ L++ YA + KVF + ++ WN ++ G+ N +A++ FK
Sbjct: 347 IESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSGFVHNRLARNAVQLFK 406
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+ML+E +V P+ T ++L A + L L +H Y +G+ + V + L+D+Y+KC
Sbjct: 407 EMLLE-NVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFLCKLEVASMLVDIYSKC 465
Query: 296 GVIESAVDVFNC--LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
G + A +F+ L +DII W +I+ HG A+SLF+QM S E+P+ VTF
Sbjct: 466 GTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMAVSLFNQMVQSGEKPNEVTFTS 525
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+L AC+H GLV G F M+ Y +IP ++HY C+ DLLGRAG L+ A + +R MP+
Sbjct: 526 VLHACSHAGLVDQGLSLFNLMLKKYQVIPSVDHYTCIVDLLGRAGRLNDAYNLIRTMPIT 585
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
+ +W +LLGAC H+NVE+ E+A + ELEP+N N+V+L+ +Y +GRW+D R++
Sbjct: 586 HNHAVWGALLGACVIHENVELGEIAARWTFELEPENTGNYVLLAKLYAAVGRWRDAERVR 645
Query: 474 IAMRDTGFRKLPGCSVIE-------------CNDSVVEFY 500
+ + G RK P S++E C+ S+ FY
Sbjct: 646 NMVNEVGLRKTPANSLVELVYGITEQDMMIVCSLSLTSFY 685
Score = 176 bits (445), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 142/504 (28%), Positives = 218/504 (43%), Gaps = 96/504 (19%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A ++FDK+P+ N +WN M Y D + +F EM + A +HFT PIV+++
Sbjct: 64 SYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKA 123
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
CS+ V G VH AK GF NSF+ +L+ MY G A VF M ER VV W
Sbjct: 124 CSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVFELMQERTVVSW 183
Query: 122 TAMI--------------------------------SAYISCG---DVGSGRRLLDLAPE 146
+I S +CG +V GR + L E
Sbjct: 184 NTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVELGREVRALTLE 243
Query: 147 R----DVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ +VV+ + ++ Y++ G+M AR L + M +DV++W TL+NGY +GD S
Sbjct: 244 KGYWGNVVVRNALLDMYVKCGEMEEARLLLNGMEEKDVVTWTTLINGYVVNGDARS---- 299
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
AL + M +EG V PN ++ ++L AC L +
Sbjct: 300 ---------------------------ALMLCRSMQLEG-VKPNLVSVASLLSACGDLVS 331
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
L GK +H +A + + + ALIDMYAKC + VF ++ WN +++G
Sbjct: 332 LKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAPWNAVLSG 391
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACT-----------HMGLVRDGFLYF 371
+ +A+ LF +M QPD TF +L A H LV+ GFL
Sbjct: 392 FVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLVKLGFL-- 449
Query: 372 QSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM-EPDAVIWTSLLGACRTHK 430
++E + D+ + G L A +P+ + D +IWT+++ A H
Sbjct: 450 ----------CKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHG 499
Query: 431 NVEIAELAFQHLIEL-EPKNPANF 453
E+A F +++ E N F
Sbjct: 500 YGEMAVSLFNQMVQSGEKPNEVTF 523
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 141/288 (48%), Gaps = 7/288 (2%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L YA ++F+++P+RN++SWN ++ Y + GR DAL F +ML G +P
Sbjct: 53 LATTYAQCHHASYASQLFDKLPKRNLFSWNTMMRMYVQMGRPHDALNMFVEMLHSGRAMP 112
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
+ FT V+ ACS L +DMG VH G+ N FV N+L+ MY G E+A VF
Sbjct: 113 DHFTYPIVIKACSELLFVDMGVGVHGQTAKCGFDLNSFVQNSLLAMYMNVGEKEAARLVF 172
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+ R ++SWNT+INGL + DAL ++ +M + D T V +L AC + V
Sbjct: 173 ELMQERTVVSWNTLINGLFRNNCAEDALRVYSRMVDEGVGVDCATVVSVLQACGVLKNVE 232
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G +++ + + D+ + G +++A + M E D V WT+L+
Sbjct: 233 LG-REVRALTLEKGYWGNVVVRNALLDMYVKCGEMEEARLLLNGME-EKDVVTWTTLING 290
Query: 426 CRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
+ + A L ++LE P N V ++++ G D+ LK
Sbjct: 291 YVVNGDARSA-LMLCRSMQLEGVKP-NLVSVASLLSACG---DLVSLK 333
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 129/276 (46%), Gaps = 12/276 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR + + M E + TW + NGY + R ++L M P N ++ ++
Sbjct: 266 MEEARLLLNGMEEKDVVTWTTLINGYVVNGDARSALMLCRSMQLEGVKP-NLVSVASLLS 324
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C +++ G+ +H A ++ + + TALI+MY+ +YKVF + ++
Sbjct: 325 ACGDLVSLKHGKCLHAWAIRQNIESEVVMETALIDMYAKCNEGNLSYKVFMKTSKKRTAP 384
Query: 121 WTAMISAYI----SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W A++S ++ + V + +L + D ++ ++ Y D+ A + +
Sbjct: 385 WNAVLSGFVHNRLARNAVQLFKEMLLENVQPDSPTFNSLLPAYAILADLKQAMNMHCYLV 444
Query: 177 NRDVMS----WNTLLNGYANSGDVGSFEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDA 230
+ + L++ Y+ G +G ++F+ +P ++++ W +I Y ++G A
Sbjct: 445 KLGFLCKLEVASMLVDIYSKCGTLGYAHQIFDMIPLKDKDIIIWTAIIDAYGKHGYGEMA 504
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+ F QM+ G+ PN+ T +VL ACS G +D G
Sbjct: 505 VSLFNQMVQSGE-KPNEVTFTSVLHACSHAGLVDQG 539
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 1/107 (0%)
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+L K +H + G + + + L YA+C A +F+ L +R++ SWNTM+
Sbjct: 27 SLSETKKLHALIITYGLFSSSQLSSKLATTYAQCHHASYASQLFDKLPKRNLFSWNTMMR 86
Query: 322 GLAMHGNTADALSLFDQMKNS-REQPDGVTFVGILSACTHMGLVRDG 367
G DAL++F +M +S R PD T+ ++ AC+ + V G
Sbjct: 87 MYVQMGRPHDALNMFVEMLHSGRAMPDHFTYPIVIKACSELLFVDMG 133
>Medtr8g075460.1 | PPR containing plant-like protein | HC |
chr8:31911388-31913406 | 20130731
Length = 672
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 278/566 (49%), Gaps = 75/566 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNH--FTLPIV 58
+ A+ +F+ MP N WN+M +GYS R+ ++LF EMN ++ F L V
Sbjct: 108 LQQAQALFNAMPMKNPLVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTV 167
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKW--------------------------------- 85
+C+ A+ G+QVH GF++
Sbjct: 168 FGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVVGFVKEV 227
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLD--- 142
+ F +AL+ Y+ G + DA KVF + V+W ++IS Y+S G+ L +
Sbjct: 228 DDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEMEALALFNKMR 287
Query: 143 ------------------------------------LAPERDVVMWSIVISGYIESGDMV 166
+ D+V+ S ++ Y +
Sbjct: 288 RNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQHPH 347
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
+ +LF ++ D + NT++ Y N G V ++VF MP + + SWN ++ G +N
Sbjct: 348 DSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQNAC 407
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
S+AL+ F M+ + DV + F+ +V+ AC+ +L++G+ + A ++G + + +
Sbjct: 408 PSEALDTF-SMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIICT 466
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+L+D Y KCG++E VF+ + + D +SWNTM+ G A +G +AL+LF++M S +P
Sbjct: 467 SLVDFYCKCGLVEMGRKVFDGMIKTDEVSWNTMLMGYATNGYGIEALTLFNEMGYSGVRP 526
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
+TF GILSAC H GLV +G F++M Y I P IEHY CM DL R G +A+
Sbjct: 527 SAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEAMYL 586
Query: 407 VRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRW 466
+ +MP + DA +W S+L C +H N I ++A + +I+L+P N ++ LSNI W
Sbjct: 587 IEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATSEDW 646
Query: 467 QDVARLKIAMRDTGFRKLPGCSVIEC 492
+ A ++ MR+ +K+PGCS ++C
Sbjct: 647 EGSAEVRELMRNKNVQKIPGCSWMDC 672
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/469 (25%), Positives = 213/469 (45%), Gaps = 66/469 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV-LFAEMNRAAAAPLNHFTLPIVVRSC 62
A K+FD+MP+PN +WN + + + HR+ + LF M H++ ++V +
Sbjct: 49 ASKLFDEMPQPNPFSWNTLIEAH-INLGHRNKSLELFHAMPHKT-----HYSWNLIVSTL 102
Query: 63 SKAGAVREGEQV-HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP------- 114
SK+G +++ + + + + K WNS +I YS G ++ +F EM
Sbjct: 103 SKSGDLQQAQALFNAMPMKNPLVWNS-----MIHGYSRHGYPRNSLLLFKEMNLDPLETV 157
Query: 115 ERNVVVWTAMISA-----YISCGDVGSGRRLLD-LAPERDVVMWSIVISGYIESGDMVSA 168
R+ V + + A + CG R +D E+D V+ S +++ Y + GD+ SA
Sbjct: 158 HRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSA 217
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ + D S + L++GYAN+G + KVF+ + WN +I GY NG
Sbjct: 218 ARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEEM 277
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
+AL F +M G V DF+ VA +L+ S L +++ K +H +A IG ++ V +
Sbjct: 278 EALALFNKMRRNG--VWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVAST 335
Query: 288 LIDMYAK-------------------------------CGVIESAVDVFNCLDRRDIISW 316
L+D Y+K CG +E A +VFN + + +ISW
Sbjct: 336 LLDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISW 395
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N+++ GL + ++AL F M + D +F ++SAC + G F +
Sbjct: 396 NSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAI- 454
Query: 377 HYSIIPQIEHYGC--MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ + + C + D + GL++ M ++ D V W ++L
Sbjct: 455 --TLGLESDQIICTSLVDFYCKCGLVEMGRKVFDGM-IKTDEVSWNTML 500
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 197/438 (44%), Gaps = 53/438 (12%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCT-ALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
+RE Q+H K G +S + T L+++YS +GS+ DA K+F EMP+ N W +I
Sbjct: 9 TIREARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFSWNTLI 68
Query: 126 SAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNT 185
A+I+ G L P + W++++S +SGD+ A+ LF+ MP ++ + WN+
Sbjct: 69 EAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNPLVWNS 128
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-DVV 244
+++GY+ GY RN +L FK+M ++ + V
Sbjct: 129 MIHGYSRH--------------------------GYPRN-----SLLLFKEMNLDPLETV 157
Query: 245 PND-FTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
D F L V AC+ L ALD GK VH V+ + ++ + + +++++ Y KCG ++SA
Sbjct: 158 HRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSA 217
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
V + D S + +++G A G +DA +FD ++ P V + I+S
Sbjct: 218 ARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFD----NKVDPCSVLWNSIISGYVSN 273
Query: 362 GLVRDGFLYFQSMVDH--YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIW 419
G + F M + + + + ++ L L+ Q K+ D V+
Sbjct: 274 GEEMEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVA 333
Query: 420 TSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
++LL A ++ + F EL+ + + +Y + GR +D +
Sbjct: 334 STLLDAYSKCQHPHDSCKLFH---ELKVYDAILLNTMITVYCNCGRVEDAKEV------- 383
Query: 480 GFRKLPGCSVIECNDSVV 497
F +P ++I N +V
Sbjct: 384 -FNSMPNKTLISWNSILV 400
>Medtr8g088300.1 | pentatricopeptide (PPR) repeat protein | HC |
chr8:36572831-36570446 | 20130731
Length = 700
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 281/573 (49%), Gaps = 54/573 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VF+K+P P+ + + + Y+ + + + LF ++ ++ ++ C+
Sbjct: 49 ARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICN 108
Query: 64 K-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVV 120
AV+ +++ + W T +I + + G V +A + F MP +++V
Sbjct: 109 DFVTAVKLFDEM---PQRNSISW-----TTIIHGFLSTGRVNEAERFFNAMPYVDKDVAT 160
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
W AM++ Y + G V RL P RDV+ W+ +I G +G A F M
Sbjct: 161 WNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSG 220
Query: 181 --MSWNTLLNG----------------------------------------YANSGDVGS 198
+S TL+ G YA+ +G
Sbjct: 221 VGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGD 280
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
KVF E +NV W L+ G N + +ALE F +M+ +VVPN+ + + L +C
Sbjct: 281 ACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMM-RFNVVPNESSFTSALNSCV 339
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNT 318
L L+ G+ +H +G + ++ GN+L+ MY+KCG I A+ VF + ++++SWN+
Sbjct: 340 GLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVSWNS 399
Query: 319 MINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHY 378
+I G A HG AL LF +M + D +T G+LSAC+ G+++ +F
Sbjct: 400 VIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKR 459
Query: 379 SIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
S+ +EHY CM D+LGR G +++A + MP+E ++++W LL ACR H ++++AE A
Sbjct: 460 SMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSLDVAERA 519
Query: 439 FQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
+ + E+EP A +V+LSN+Y RW +VAR+++ M+ G K PG S I E
Sbjct: 520 AKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHNGIVKQPGSSWITLKGMRHE 579
Query: 499 FYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
F S D HP TE IY L L + LR GY+P+
Sbjct: 580 FLSADRSHPLTEEIYEKLVWLGVKLRELGYIPD 612
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 159/346 (45%), Gaps = 47/346 (13%)
Query: 1 MGHARKVFDKMP--EPNTATWNAMFNGYSLTESHRDVVVLFAEM---------------- 42
+ A + F+ MP + + ATWNAM NGY D + LF +M
Sbjct: 141 VNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRDVISWTSIIVGLD 200
Query: 43 -NRAAAAPLNHF--------------TLPIVVRSCSKAGAVREGEQVHCVAAKRGF--KW 85
N + L F TL + + +K G Q+HC K GF
Sbjct: 201 RNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGL 260
Query: 86 NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISA------YISCGDVGSGRR 139
+ F+ +L+ Y++ +GDA KVFGE +NVVVWTA+++ ++ +V S
Sbjct: 261 DEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMM 320
Query: 140 LLDLAPERD---VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDV 196
++ P + S V +E G ++ A + + N V + N+L+ Y+ G +
Sbjct: 321 RFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENA-VYTGNSLVVMYSKCGFI 379
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
G VF+ + E+NV SWN +I G A++G + AL FK+ML EG V ++ TL +L A
Sbjct: 380 GDALCVFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFKEMLREG-VESDEITLTGLLSA 438
Query: 257 CSRLGALDMGK-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESA 301
CSR G L + + +A K + ++D+ +CG +E A
Sbjct: 439 CSRSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEA 484
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 24/297 (8%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
MG A KVF + N W A+ G L + H + + +F+EM R P N + +
Sbjct: 278 MGDACKVFGETVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVP-NESSFTSALN 336
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
SC + +G +H K G + + +L+ MYS G +GDA VF + E+NVV
Sbjct: 337 SCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDALCVFKGICEKNVVS 396
Query: 121 WTAMISAYISCGDVGSG-------RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
W ++I + C G G + +L E D + + ++S SG + AR F
Sbjct: 397 WNSVI---VGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFG 453
Query: 174 KMPNRDVMS-----WNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRF 227
+ M + +++ G+V E + MP E N W VL+ +
Sbjct: 454 YFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVWLVLLSACRVHSSL 513
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
A A K++ + L++ L A SR +W+ V + K N V
Sbjct: 514 DVAERAAKRIFEMEPDCSAAYVLLSNLYASSR-------RWLEVARIRMKMKHNGIV 563
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/423 (18%), Positives = 157/423 (37%), Gaps = 105/423 (24%)
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN--- 177
+T+ I+ ++ C + + P+ + ++++ + SAR +F+K+P+
Sbjct: 4 FTSQITTHLKCRTTPFTTLIQN--PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHV 61
Query: 178 ------------------------------RDVMSWN----------------------- 184
+D +SWN
Sbjct: 62 SLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKASIICNDFVTAVKLFDEMP 121
Query: 185 --------TLLNGYANSGDVGSFEKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEAF 234
T+++G+ ++G V E+ F MP +++V +WN ++ GY NGR +DAL F
Sbjct: 122 QRNSISWTTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLF 181
Query: 235 KQMLVEGDVVP--------------------------------NDFTLVAVLLACSRLGA 262
QM DV+ + TLV L A +++
Sbjct: 182 CQM-PSRDVISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILD 240
Query: 263 LDMGKWVHVYAESIGYKGNM--FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
G +H G+ + FV +L+ YA C + A VF ++++ W ++
Sbjct: 241 FYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCKNVVVWTALL 300
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
G ++ +AL +F +M P+ +F L++C + + G + + + +
Sbjct: 301 TGCGLNDKHVEALEVFSEMMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIK-MGL 359
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
+ + + + G + A+ V K E + V W S++ C H A + F+
Sbjct: 360 ENAVYTGNSLVVMYSKCGFIGDALC-VFKGICEKNVVSWNSVIVGCAQHGCGTWALVLFK 418
Query: 441 HLI 443
++
Sbjct: 419 EML 421
>Medtr6g066360.1 | PPR containing plant-like protein | HC |
chr6:24701161-24699312 | 20130731
Length = 563
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 161/501 (32%), Positives = 271/501 (54%), Gaps = 14/501 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD+MPE + +WN++ + Y + L EM P + + I+ S
Sbjct: 64 ARKVFDEMPERSVVSWNSLISAYCHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGYSS 123
Query: 64 KAGAVR---EGEQVHCVAAKRGFK-WNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ +G +HC K G + L +L+ MY+ G + +A KVF M E+ +V
Sbjct: 124 NLNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIV 183
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER----DVVMWSIVISGYIESGDMV---SARELF 172
WT ++ Y+ G +L + + D +++ ++SG I+ + + S L
Sbjct: 184 SWTTIMGGYVKVGSSVEAVKLFNEMQHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSLV 243
Query: 173 DKMPNRDVMSW-NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
K + S N LL YA G++ S +F+ + ++V SW +I GYA + R +AL
Sbjct: 244 LKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEAL 303
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
+ F++M V ++ PN TL VL AC+ LG+L +G+ + YA G++ ++ V +L+ M
Sbjct: 304 DLFRRM-VMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHM 362
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS-REQPDGVT 350
Y+KCG I A +VF ++ +D+ W++MIN +HG +A+SLF++M + R +PD +
Sbjct: 363 YSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIV 422
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
+ +L AC+H GL+ DG YF+SM + I P EHY C+ DLL R G LD A+ + M
Sbjct: 423 YTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLVDLLARVGQLDLALDTIEAM 482
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
P + A + LL ACR H N+E+ EL L+++ PK+ +++V ++N+Y +G+W++
Sbjct: 483 PTDVQAEALSPLLSACRIHGNIELGELVAAKLLDVSPKSSSSYVGVANLYNSVGKWKEAN 542
Query: 471 RLKIAMRDTGFRKLPGCSVIE 491
++ + G K G S ++
Sbjct: 543 TMRNMIDGKGMVKECGWSQVQ 563
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 211/428 (49%), Gaps = 58/428 (13%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N FT P++ +SC+ ++ G +H + GF+ ++F+ T+L++MYS + A KVF
Sbjct: 9 NTFTYPLLFKSCANLLSIPHGTMLHGHVFRLGFQADTFVQTSLVDMYSKCSVIESARKVF 68
Query: 111 GEMPERNVVVWTAMISAYISCGD------VGSGRRLLDLAPERDVVMWSIVISGYIESGD 164
EMPER+VV W ++ISAY C + + + +L L + + ++SGY S +
Sbjct: 69 DEMPERSVVSWNSLISAY--CHESMMEKALSLIKEMLVLGFKPSSSTFVSILSGY--SSN 124
Query: 165 MVSARELFDKMPNR-----------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYS 213
+ S L+ M +V N+L+ YA G + KVF+ M E+ + S
Sbjct: 125 LNSFEFLWQGMSMHCFVIKLGLVCFEVSLDNSLMGMYAQFGQMDEARKVFDFMDEKTIVS 184
Query: 214 WNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA-CSRLGALDMGKWVHVY 272
W ++GGY + G +A++ F +M + + DF + L++ C +L + VH
Sbjct: 185 WTTIMGGYVKVGSSVEAVKLFNEM--QHQNIGLDFIVFVNLVSGCIQLREQLLASSVHSL 242
Query: 273 AESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADA 332
G + N L+ MYA+CG + SA +F+ + R+ ++SW +MI G A +A
Sbjct: 243 VLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLSWTSMIAGYAHSRRPKEA 302
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHMGLV-----------RDGF---LYFQ-SMVDH 377
L LF +M + +P+ T +LSAC +G + +GF L Q S+V
Sbjct: 303 LDLFRRMVMTEIKPNRATLATVLSACADLGSLCIGEEIEQYAFENGFETDLQVQTSLVHM 362
Query: 378 YS----------IIPQIEH-----YGCMADLLGRAGLLDQAVSFVRKMP----MEPDAVI 418
YS + ++E+ + M + G G+ ++A+S KM ++PDA++
Sbjct: 363 YSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEAISLFEKMTTAERIKPDAIV 422
Query: 419 WTSLLGAC 426
+TSLL AC
Sbjct: 423 YTSLLFAC 430
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 15/340 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M ARKVFD M E +W + GY S + V LF EM L+ +V
Sbjct: 167 MDEARKVFDFMDEKTIVSWTTIMGGYVKVGSSVEAVKLFNEMQHQNIG-LDFIVFVNLVS 225
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C + VH + K G + L+ MY+ G++ A +F + ++V+
Sbjct: 226 GCIQLREQLLASSVHSLVLKCGCHEEDSIKNLLLTMYARCGNLTSARIIFDLIVRKSVLS 285
Query: 121 WTAMISAYISCGDVGSG----RRLL--DLAPERDVVMWSIVISGYIESGDMVSAREL--- 171
WT+MI+ Y RR++ ++ P R + + V+S + G + E+
Sbjct: 286 WTSMIAGYAHSRRPKEALDLFRRMVMTEIKPNRATL--ATVLSACADLGSLCIGEEIEQY 343
Query: 172 -FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
F+ D+ +L++ Y+ G++ +VFE + +++ W+ +I Y +G ++A
Sbjct: 344 AFENGFETDLQVQTSLVHMYSKCGNINKAREVFERVENKDLTLWSSMINSYGIHGMGNEA 403
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALI 289
+ F++M + P+ ++L ACS G ++ G K+ G L+
Sbjct: 404 ISLFEKMTTAERIKPDAIVYTSLLFACSHSGLIEDGLKYFKSMQTDFGITPTKEHYTCLV 463
Query: 290 DMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
D+ A+ G ++ A+D + + + +++ +HGN
Sbjct: 464 DLLARVGQLDLALDTIEAMPTDVQAEALSPLLSACRIHGN 503
>Medtr2g042550.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:18562024-18564318 | 20130731
Length = 740
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 271/527 (51%), Gaps = 72/527 (13%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
NH TL + + C+ ++ Q+H G + ++ + LI++ S+K ++ A+K+
Sbjct: 147 FNHPTLQTLQQKCNNFNTLK---QIHTQIITTGLSFQTYCLSHLIKI-SSKFNLPYAFKI 202
Query: 110 FGEMPERNVVVWTAMISAYI------------------------------------SC-- 131
F + + ++ +IS+ I +C
Sbjct: 203 FNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSFTFPSLFKACCS 262
Query: 132 -------GDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWN 184
G + L L P D + + +++ Y + G M +R +FD++ D+ +WN
Sbjct: 263 NQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFDRINEPDLATWN 322
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS-DALEAFKQMLVEGDV 243
+LN YA S S+ F++ FS ++L F+ M V G +
Sbjct: 323 VILNAYARSSSYHSYSNSFDD-------------------ADFSLESLYLFRDMQVIG-I 362
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN+ T+VA++ ACS LGA+ G WVH + K N FVG A +DMY+KCG + A
Sbjct: 363 RPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQ 422
Query: 304 VFNCL--DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
VF+ + + RD + MI G A+HG AL L+ +MK PD TFV + AC+H+
Sbjct: 423 VFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHV 482
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
GLV +G F+SM + + + P++EHYGC+ DLLGRAG L +A ++ MPM+P+AV+W S
Sbjct: 483 GLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRS 542
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
LLGA R H N+ + E+A LIELEP+ N+V+LSN+Y +GR DV R++ M+ G
Sbjct: 543 LLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGV 602
Query: 482 RKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGY 528
KLPG S++E ++ EF + D HP ++ IY + + L +G+
Sbjct: 603 NKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLEEYGH 649
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 178/432 (41%), Gaps = 70/432 (16%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHR-------------DVVVLFAEMNRAAAAPL 50
+R +FD++ EP+ ATWN + N Y+ + S+ + + LF +M P
Sbjct: 306 SRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGIRP- 364
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
N T+ ++ +CS GAV +G VHC + K N F+ TA ++MYS G + A +VF
Sbjct: 365 NEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVF 424
Query: 111 GEMPE--RNVVVWTAMISAYISCG------DVGSGRRLLDLAPERD---VVMWSIVISGY 159
+MPE R+ +TAMI + G ++ + L P+ V M++ G
Sbjct: 425 DKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGL 484
Query: 160 IE-------------------------------SGDMVSARELFDKMPNR-DVMSWNTLL 187
+E +G + A E MP + + + W +LL
Sbjct: 485 VEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRSLL 544
Query: 188 NGYANSGDVG----SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
G++G + K+ E PE + ++ +L YA GR +D K M G
Sbjct: 545 GAARIHGNLGVGEVALTKLIELEPETSG-NYVLLSNMYASVGRVNDVKRVRKLMKHHGVN 603
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
F+LV + A + G H +++ I K + N+ ++ Y A+
Sbjct: 604 KLPGFSLVEIKGA---MHEFLTGDRSHPFSKEIYLK--IAEINSRLEEYGHKARTSEALF 658
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
D+ ++S+++ +A + + +KN R D F ++S H +
Sbjct: 659 DLEEEDKEGVLSYHSERLAIAFALIASPSSLAIRIIKNLRVCGDCHAFTKLISVAYHREI 718
Query: 364 V---RDGFLYFQ 372
+ R+ F +F+
Sbjct: 719 IVRDRNRFHHFK 730
>Medtr0013s0120.1 | pentatricopeptide (PPR) repeat protein | HC |
scaffold0013:48776-47089 | 20130731
Length = 558
Score = 281 bits (720), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/347 (42%), Positives = 212/347 (61%), Gaps = 5/347 (1%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
YA +G + KVF+EM +R++ SWN +I G A+ R +A+ F +M EG PND T
Sbjct: 130 YAKTGFIDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEG-WRPNDVT 188
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
++ L ACS+LGAL G+ VH Y N+ V NA+IDM+AKCG ++ A VF +
Sbjct: 189 VLGALSACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMS 248
Query: 310 -RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF 368
R+ +I+WNTMI AM+G+ AL L D+M PD V+++G L AC H GLV +G
Sbjct: 249 CRKSLITWNTMIMAFAMNGDGYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGV 308
Query: 369 LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRT 428
F M + ++HYG M DLLGRAG L +A + MPM PD V+W SLLGAC+T
Sbjct: 309 RLFDLM-KVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKT 367
Query: 429 HKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS 488
+ NVE+AE+A + L+E+ + +FV+LSN+Y RW+DV R++ AM D+ RK+PG S
Sbjct: 368 YGNVEMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQRWKDVGRVREAMVDSDVRKVPGFS 427
Query: 489 VIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYV--PNLV 533
E + + +F + D+ HP ++ IY L + ++ +GY+ NLV
Sbjct: 428 YTEVDGRIHKFINYDQSHPNSKEIYAKLDEIKFRIKEYGYIAETNLV 474
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 159/336 (47%), Gaps = 14/336 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F ++ P T +NA+ G + + + + +M ++ T ++ C+
Sbjct: 38 AGNIFRQIQNPTTNDYNAILRGLAQSSEPTQSISWYRDM-LCCVQRVDALTCSFALKGCA 96
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+A A E Q+H + GF + L T L+++Y+ G + A KVF EM +R++ W A
Sbjct: 97 RALAFSEATQLHSQVLRFGFDADVLLLTTLLDVYAKTGFIDYARKVFDEMDKRDIASWNA 156
Query: 124 MISAYISCGDVGSGRRLLDLAPER-----DVVMWSIVIS----GYIESGDMVSARELFDK 174
MIS L + E DV + + + G ++ G++V R + D+
Sbjct: 157 MISGLAQGSRPDEAIALFNRMKEEGWRPNDVTVLGALSACSQLGALKEGEIVH-RYVLDE 215
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFSDALEA 233
+R+V+ N +++ +A G V VFE M +++ +WN +I +A NG AL+
Sbjct: 216 KLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLITWNTMIMAFAMNGDGYKALDL 275
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
+M ++G P+ + + L AC+ G +D G + + G K N+ +++D+
Sbjct: 276 LDRMSLDG-TCPDAVSYLGALCACNHAGLVDEGVRLFDLMKVSGVKLNVKHYGSMVDLLG 334
Query: 294 KCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGN 328
+ G ++ A ++ N + D++ W +++ +GN
Sbjct: 335 RAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGN 370
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 17/272 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +ARKVFD+M + + A+WNAM +G + + + LF M P N T+ +
Sbjct: 136 IDYARKVFDEMDKRDIASWNAMISGLAQGSRPDEAIALFNRMKEEGWRP-NDVTVLGALS 194
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVV 119
+CS+ GA++EGE VH N +C A+I+M++ G V AY VF M ++++
Sbjct: 195 ACSQLGALKEGEIVHRYVLDEKLDRNVIVCNAVIDMFAKCGFVDKAYSVFESMSCRKSLI 254
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSIVISGYIESGDMVSARELF 172
W MI A+ GD G + LDL D V + + +G + LF
Sbjct: 255 TWNTMIMAFAMNGD---GYKALDLLDRMSLDGTCPDAVSYLGALCACNHAGLVDEGVRLF 311
Query: 173 DKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRF 227
D M +V + ++++ +G + ++ MP +V W L+G G
Sbjct: 312 DLMKVSGVKLNVKHYGSMVDLLGRAGRLKEAYEIINSMPMFPDVVLWQSLLGACKTYGNV 371
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
A A K+++ G DF L++ + A +
Sbjct: 372 EMAEMASKKLVEMGSNSSGDFVLLSNVYAAQQ 403
>Medtr7g082690.1 | PPR containing plant-like protein | HC |
chr7:31706993-31708834 | 20130731
Length = 503
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 261/495 (52%), Gaps = 10/495 (2%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++FD+MPE N +W+++ G D + LF+ M+R N FT +++CS
Sbjct: 11 ALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACS 70
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ V + Q++ + + G + N FL A + G + +A ++F P R+ V W
Sbjct: 71 LSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNT 130
Query: 124 MISAYI--SCGDVGSGRRLLDLAPER-DVVMWSIVISGY-----IESGDMVSARELFDKM 175
M+ Y+ S + R ++ + D ++ ++G ++ G V A +L
Sbjct: 131 MMGGYLEFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQVHA-QLVRSG 189
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D+ N+L++ Y + + K F+E+P ++V SW + G + G AL
Sbjct: 190 YGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIA 249
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
+M G V PN FTL L AC+ L +++ GK H +G ++ V NAL+DMYAKC
Sbjct: 250 KMKKMG-VKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKC 308
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++SA VF + R ++SW TMI A +G +AL +FD+MK + +P+ +TF+ +L
Sbjct: 309 GCMDSAWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVEPNYITFICVL 368
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
AC+ G V +G+ Y SM Y IIP +HY CM +LGRAGL+ +A + +MP P
Sbjct: 369 YACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEAKELILRMPFHPG 428
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+W +LL AC+ H +VE +LA +H I+ + +P+++V+LSN+ + W V L+
Sbjct: 429 VRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAETSNWDCVVSLREL 488
Query: 476 MRDTGFRKLPGCSVI 490
M +K+PG S I
Sbjct: 489 METRNVKKVPGSSWI 503
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 44/339 (12%)
Query: 128 YISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM-------PNR-- 178
YI C D+ S +L D PER+VV WS V++G + +G A LF M PN
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 179 -------------------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
+V N L +G + ++FE P
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP 121
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
R+ +WN ++GGY S+ + F + + V P++FT + L + + +L MG
Sbjct: 122 IRDTVTWNTMMGGYLEFS--SEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGM 179
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
VH GY ++ VGN+L+DMY K +E F+ + +D+ SW M +G G
Sbjct: 180 QVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWG 239
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
AL++ +MK +P+ T L+AC + + +G + + S + +
Sbjct: 240 EPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDV-DVCVD 298
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ D+ + G +D A + R V WT+++ AC
Sbjct: 299 NALLDMYAKCGCMDSAWTVFRSTNSR-SVVSWTTMIMAC 336
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 127/279 (45%), Gaps = 38/279 (13%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
Y D+ S ++F+EMPERNV SW+ ++ G NG SDAL F M EG V PN+FT
Sbjct: 2 YIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFT 61
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
V+ L ACS + ++ G + N+F+ NA + + G + A+ +F
Sbjct: 62 FVSALQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSP 121
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE--QPDGVTFVGILSAC--------- 358
RD ++WNTM+ G +++ + +F + N RE +PD TF L+
Sbjct: 122 IRDTVTWNTMMGGYLEF--SSEQIPVFWRYMN-REGVKPDEFTFASALTGLATISSLKMG 178
Query: 359 --THMGLVRDG--------------FLYFQSMVDHYSIIPQIEH-----YGCMADLLGRA 397
H LVR G +L Q + + + +I H + MAD +
Sbjct: 179 MQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQW 238
Query: 398 GLLDQAVSFV---RKMPMEPDAVIWTSLLGACRTHKNVE 433
G A++ + +KM ++P+ + L AC ++E
Sbjct: 239 GEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASME 277
>Medtr2g024080.1 | PPR containing plant-like protein | HC |
chr2:8563899-8566215 | 20130731
Length = 767
Score = 280 bits (716), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 271/518 (52%), Gaps = 20/518 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAP-LNHF--TLPIVVR 60
RK+F+ M + +WN++ + Y+ +V++L M P L F L + V
Sbjct: 221 CRKLFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVS 280
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ G +R G VH + GF ++ + T+ I MY G++ A+K+F +++VV+
Sbjct: 281 T----GDMRLGRLVHGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVL 336
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVIS----GYIESGDMVSARE 170
WTAMIS + + + D + P + M S++ + G G +
Sbjct: 337 WTAMISGLVQNENADKALAVFDQMFKFGMKPSTET-MASVITACAQLGAFNLGKSIHGYI 395
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
L K+ + D + N+L+ YA G + VF+ M +R++ SWN ++ GYA+NG A
Sbjct: 396 LRQKL-SLDTAAHNSLVTMYAKCGHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKA 454
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
F +M P+ T+V+++ C+ G L GKW+H + G + + V +L+D
Sbjct: 455 FSLFNEMR-SCHQTPDSITIVSLVQGCASTGQLHPGKWIHGFVIRNGLRPCILVDTSLVD 513
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MY KCG ++SA FN + +D++SW+ +I G HG AL L+ + +R +P+ V
Sbjct: 514 MYCKCGDLDSAQRCFNLMPSQDLVSWSAIIAGYGYHGKGETALRLYSKFLETRIKPNHVI 573
Query: 351 FVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
F+ ILS+C+H GL+ G ++SM + +P +EH+ CM DLL RAG +++A + ++M
Sbjct: 574 FLSILSSCSHNGLIDQGLNIYESMTRDFGFVPNLEHHACMVDLLCRAGKVEEAYNLYKRM 633
Query: 411 PMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVA 470
+P + +L ACR + N E+ ++ +I+L P + N+V L++ Y + +W+ V
Sbjct: 634 FSDPVLDVLGIILDACRANGNKELGDIIANDIIKLRPMSAGNYVQLAHCYASINKWEGVG 693
Query: 471 RLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPE 508
+ MR G RK+PG S I+ + ++ F++ HP+
Sbjct: 694 EVWTHMRSLGLRKIPGWSFIDIHGTITTFFTDHNSHPQ 731
Score = 187 bits (476), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 218/462 (47%), Gaps = 16/462 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD MPE N W + YS R+ LF +M P + TL ++ S
Sbjct: 123 ARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEGIQP-SSVTLLSLLFGVS 181
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ V + +H A GF + L +++ +Y GS+ D K+F M R+VV W +
Sbjct: 182 EVPYV---QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNS 238
Query: 124 MISAYISCGDVGSGRRLLDLAP----ERDVVMWSIVISGYIESGDMVSARELFDKMPN-- 177
++SAY GD+ LL E + + V+S + +GDM R + ++
Sbjct: 239 LLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGDMRLGRLVHGQILRGG 298
Query: 178 --RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
D + + Y G++ K+FE +++V W +I G +N AL F
Sbjct: 299 FVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENADKALAVFD 358
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
QM G + P+ T+ +V+ AC++LGA ++GK +H Y + N+L+ MYAKC
Sbjct: 359 QMFKFG-MKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAHNSLVTMYAKC 417
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ + VF+ + +RD++SWN ++ G A +G A SLF++M++ + PD +T V ++
Sbjct: 418 GHLDQSYIVFDRMSKRDLVSWNAIVAGYAQNGCVYKAFSLFNEMRSCHQTPDSITIVSLV 477
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
C G + G + V + P I + D+ + G LD A MP + D
Sbjct: 478 QGCASTGQLHPG-KWIHGFVIRNGLRPCILVDTSLVDMYCKCGDLDSAQRCFNLMPSQ-D 535
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
V W++++ H E A + +E K P + + LS
Sbjct: 536 LVSWSAIIAGYGYHGKGETALRLYSKFLETRIK-PNHVIFLS 576
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 187/456 (41%), Gaps = 76/456 (16%)
Query: 11 MPEP-----NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
+P P T ++NA+ N +S +HR V++ + M A P + +T P ++++CS
Sbjct: 24 LPHPPSSSATTHSYNALINRHSTQGAHRQVLITYTSM-LNANIPSDAYTFPSLLKACSFL 82
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
G +H G +S++ ++LI Y G A KVF MPERNVV WT +I
Sbjct: 83 NLFHLGNSLHQRVIVNGLSTDSYIASSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVI 142
Query: 126 SAYISCGDVGSGRRLL------DLAPE------------------------------RDV 149
Y GDV L + P D+
Sbjct: 143 GCYSKMGDVREAFSLFRQMRYEGIQPSSVTLLSLLFGVSEVPYVQCLHGCAIFYGFMSDL 202
Query: 150 VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER 209
+ + +++ Y + G + R+LF+ M RDV+SWN+LL+ YA GD+
Sbjct: 203 NLLNSMVNLYGKCGSIEDCRKLFEFMDRRDVVSWNSLLSAYAQIGDL------------- 249
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
+ L K+M ++G + P +VL G + +G+ V
Sbjct: 250 ------------------CEVLLLLKRMKLQG-LEPGLQAFGSVLSVAVSTGDMRLGRLV 290
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
H G+ + + + I MY K G I A +F +D++ W MI+GL + N
Sbjct: 291 HGQILRGGFVLDAHIETSFIVMYLKGGNINVAFKMFERSLDKDVVLWTAMISGLVQNENA 350
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGC 389
AL++FDQM +P T +++AC +G G ++ + H
Sbjct: 351 DKALAVFDQMFKFGMKPSTETMASVITACAQLGAFNLGKSIHGYILRQKLSLDTAAH-NS 409
Query: 390 MADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
+ + + G LDQ+ +M + D V W +++
Sbjct: 410 LVTMYAKCGHLDQSYIVFDRMS-KRDLVSWNAIVAG 444
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 141/277 (50%), Gaps = 9/277 (3%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
++L+N Y G KVF+ MPERNV W +IG Y++ G +A F+QM EG +
Sbjct: 108 SSLINFYVKFGYNDVARKVFDFMPERNVVPWTTVIGCYSKMGDVREAFSLFRQMRYEG-I 166
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
P+ TL+++L S + + + +H A G+ ++ + N+++++Y KCG IE
Sbjct: 167 QPSSVTLLSLLFGVSEVPYV---QCLHGCAIFYGFMSDLNLLNSMVNLYGKCGSIEDCRK 223
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+F +DRRD++SWN++++ A G+ + L L +MK +P F +LS G
Sbjct: 224 LFEFMDRRDVVSWNSLLSAYAQIGDLCEVLLLLKRMKLQGLEPGLQAFGSVLSVAVSTGD 283
Query: 364 VRDG-FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
+R G ++ Q + + + IE + L G G ++ A + ++ D V+WT++
Sbjct: 284 MRLGRLVHGQILRGGFVLDAHIETSFIVMYLKG--GNINVAFKMFER-SLDKDVVLWTAM 340
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNI 459
+ ++N + A F + + K P+ M S I
Sbjct: 341 ISGLVQNENADKALAVFDQMFKFGMK-PSTETMASVI 376
>Medtr2g049310.1 | PPR containing plant-like protein | HC |
chr2:21732028-21729769 | 20130731
Length = 717
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 270/518 (52%), Gaps = 21/518 (4%)
Query: 19 WNAMFNGYSLTESHRDV--VVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHC 76
WN + Y ES + V LF M P N TL ++R+ ++ +++ G+ +H
Sbjct: 185 WNNLI--YEAYESGKIVESFELFCRMRNENVQP-NSVTLINLLRATVESNSLKIGKVLHS 241
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
+ + TAL+ MY+ S+ DA +F +MPE++VVVW MIS Y G
Sbjct: 242 LVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKE 301
Query: 137 GRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLL 187
L+ + + SI IE G + A ++ + V N+L+
Sbjct: 302 SLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHA-QVIRNGSDYQVSVHNSLV 360
Query: 188 NGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPND 247
+ Y+ D+ S K+F + +R V SW+ +I GYA + +AL F +M + G V D
Sbjct: 361 DMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKV--D 418
Query: 248 FTLVA-VLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFN 306
+V +L A +++GAL ++H Y+ + +L++ YAKCG IE A +FN
Sbjct: 419 LVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFN 478
Query: 307 --CLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
+DI++WN+MI + HG L++Q+K S +PD VTF+G+L+AC + GLV
Sbjct: 479 EEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLV 538
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
G F+ MVD Y P EH CM DLLGRAG +D+A + + DA ++ LL
Sbjct: 539 DKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLS 598
Query: 425 ACRTHK-NVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
AC+ H + AELA + LI++EP+NPAN+V+LSNI+ G+W A+++ +RD G +K
Sbjct: 599 ACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKK 658
Query: 484 LPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTM 521
PGCS + + EF D HP +E IY L+ L +
Sbjct: 659 TPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLKVLEL 696
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 164/343 (47%), Gaps = 20/343 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +F+KMPE + WN M + YS + ++ + L M R+ P + FT + S +
Sbjct: 271 ARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRP-DMFTAIPAISSIT 329
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
K ++ G+Q+H + G + + +L++MYS + A K+FG + +R VV W+A
Sbjct: 330 KLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSA 389
Query: 124 MISAYI---SCGDVGSGRRLLDLAPER-DVVMWSIVISGYIESGDM--VSARELFDKMPN 177
MI Y +C + S + L+ + D+V+ ++ + + G + V + N
Sbjct: 390 MIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTN 449
Query: 178 RDVMS--WNTLLNGYANSGDVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSDALEA 233
D + +LLN YA G + K+F E +++ +WN +I Y+ +G + E
Sbjct: 450 LDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFEL 509
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI---GYKGNMFVGNALID 290
+ Q+ + V P+ T + +L AC G +D GK ++ E + G++ + ++D
Sbjct: 510 YNQIKL-SIVKPDHVTFLGMLTACVNSGLVDKGK--EIFKEMVDIYGFQPSKEHNACMVD 566
Query: 291 MYAKCGVIESAVDVF--NCLDRRDIISWNTMINGLAMHGNTAD 331
+ + G I+ A + N L+ D + +++ MHG D
Sbjct: 567 LLGRAGKIDEARKIIETNQLN-SDARVYGPLLSACKMHGLETD 608
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 34/351 (9%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T ++ C+K + +Q+H G NS L + LI+ YS G + ++K+F
Sbjct: 23 TTSSILNLCTKPQYL---QQIHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFT 79
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYI--ESGDM 165
+ +++ A + G+ L + P+ D + Y+ E G +
Sbjct: 80 ENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLI 139
Query: 166 VSARELFDK--MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
+ A K M D++ NTL+ Y G E+ + + + N WN LI
Sbjct: 140 MMAHGHVVKLGMDAFDLVG-NTLIELYGFLNGNGLVER--KSVTKLNF--WNNLIYEAYE 194
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
+G+ ++ E F +M E +V PN TL+ +L A +L +GK +H + +
Sbjct: 195 SGKIVESFELFCRMRNE-NVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELT 253
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
V AL+ MYAK ++ A +F + +D++ WN MI+ + G ++L L M S
Sbjct: 254 VNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSG 313
Query: 344 EQPDGVTFVGILSACT-----------HMGLVRDGFLY----FQSMVDHYS 379
+PD T + +S+ T H ++R+G Y S+VD YS
Sbjct: 314 IRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYS 364
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ARK+F + + +W+AM GY++ ++ + + LF EM + + ++ + ++
Sbjct: 369 LNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEM-KLSGTKVDLVIVINILP 427
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE--RNV 118
+ +K GA+ +H + K L T+L+ Y+ G + A K+F E +++
Sbjct: 428 AFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDI 487
Query: 119 VVWTAMISAY------ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELF 172
V W +MI+AY C ++ + +L + P D V + +++ + SG + +E+F
Sbjct: 488 VAWNSMITAYSNHGEWFQCFELYNQIKLSIVKP--DHVTFLGMLTACVNSGLVDKGKEIF 545
Query: 173 DKM 175
+M
Sbjct: 546 KEM 548
>Medtr4g108660.1 | PPR containing plant-like protein | HC |
chr4:44998985-45001066 | 20130731
Length = 460
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/431 (34%), Positives = 235/431 (54%), Gaps = 34/431 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++ ++F P P+T +N + S + + + F ++ R + F+ ++
Sbjct: 61 LNYSLRLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLK 120
Query: 61 SCSKAG-AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+ G + R+G Q+H A + GF + ++
Sbjct: 121 GIANDGCSKRQGIQLHSHAFRHGF-------------------------------DDHIF 149
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
V T +IS Y CG R++ D + +VV W+ V++ GD+ A LF++MP R+
Sbjct: 150 VGTTLISMYAECGCYEYARKVFDEMSQPNVVAWNAVVTACFRCGDVEGAWGLFERMPVRN 209
Query: 180 VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLV 239
+ SWNT+L GY +G + +VF EM R+ SW+ +I G+A++G F DA FK++L
Sbjct: 210 LTSWNTMLAGYVKAGQLWLARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLR 269
Query: 240 EGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIE 299
+ + P++ +L VL AC++ GA + GK +H + E G+ + V NALID Y+KCG ++
Sbjct: 270 DRNR-PSEVSLTGVLSACAQAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVD 328
Query: 300 SAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
A VF + + I+SW +MI LAMHG +A+ +F +M+ S +PDGVTF+ +L AC
Sbjct: 329 MAKLVFQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYAC 388
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV G F M + Y I P IEHYGCM DL GRA L +A F+R+MP+ P+ +I
Sbjct: 389 SHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVII 448
Query: 419 WTSLLGACRTH 429
W +LLGAC H
Sbjct: 449 WRTLLGACSIH 459
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 135/332 (40%), Gaps = 21/332 (6%)
Query: 139 RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR-----DVMSWNTLLNGYANS 193
RL P D M++ +I S +S+ + F ++ D S+ L G AN
Sbjct: 66 RLFHHFPNPDTFMYNTLIRSLSHSSTPLSSLQPFIQLLRHPTLLPDSFSFAFTLKGIAND 125
Query: 194 G-----DVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
G + F + +++ LI YA G + A + F +M PN
Sbjct: 126 GCSKRQGIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEYARKVFDEM-----SQPNVV 180
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL 308
AV+ AC R G ++ G W E + + N+ N ++ Y K G + A VF +
Sbjct: 181 AWNAVVTACFRCGDVE-GAWG--LFERMPVR-NLTSWNTMLAGYVKAGQLWLARRVFCEM 236
Query: 309 DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGF 368
RD SW+TMI G A G+ DA F ++ R +P V+ G+LSAC G G
Sbjct: 237 KMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGK 296
Query: 369 LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRT 428
+ ++ + + + D + G +D A + M E V WTS++ A
Sbjct: 297 I-LHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWTSMIAALAM 355
Query: 429 HKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
H + A F H +E P +S +Y
Sbjct: 356 HGRADEAIRVF-HEMEESGVRPDGVTFISLLY 386
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 22/238 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VF +M + A+W+ M G++ + S D F E+ R P + +L V+ +C+
Sbjct: 229 ARRVFCEMKMRDDASWSTMIVGFAKSGSFHDAFGFFKELLRDRNRP-SEVSLTGVLSACA 287
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVWT 122
+AGA G+ +H K GF + ALI+ YS G+V A VF M E+ +V WT
Sbjct: 288 QAGAFEFGKILHGFMEKAGFLCIVSVNNALIDTYSKCGNVDMAKLVFQHMSAEKCIVSWT 347
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDV---------VMWSIVISGYIESGDMVSARELFD 173
+MI+A G R+ E V ++++ SG +E G LF
Sbjct: 348 SMIAALAMHGRADEAIRVFHEMEESGVRPDGVTFISLLYACSHSGLVEQGC-----ALFS 402
Query: 174 KMPN-----RDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNG 225
KM N + + +++ Y + + + +MP NV W L+G + +G
Sbjct: 403 KMRNFYGIEPAIEHYGCMVDLYGRAARLQKAYEFIRQMPILPNVIIWRTLLGACSIHG 460
>Medtr8g035960.1 | PPR containing plant-like protein | HC |
chr8:13156718-13159093 | 20130731
Length = 791
Score = 277 bits (709), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 179/537 (33%), Positives = 281/537 (52%), Gaps = 24/537 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTES--HRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
A +VF++M + +WNAM +GY+ + V+LF M R L+H +L + +
Sbjct: 241 AGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGML-LDHVSLTGAISA 299
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C + G+Q+H +A K G+ + +C LI YS + DA VF +M RNVV W
Sbjct: 300 CGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSW 359
Query: 122 TAMISAYISCGDVGS---GRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDK 174
T +IS I +V S R+ + P DV ++ +I I ++ G MV L
Sbjct: 360 TTLIS--IDEENVVSLFNAMRVDGVYP-NDVTFIGLLHAITIRNMVKEGLMVHGLCLKSC 416
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ + +S N+L+ YA + +K+FEE+ + SWN LI GYA+NG +A F
Sbjct: 417 LSSEQNVS-NSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFLTF 475
Query: 235 KQMLVEGDVVPNDFTLVAVL--LACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+ E + PN +T +VL +A + +L G+ H + +G + FV AL+DMY
Sbjct: 476 LSAIKE--IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMY 533
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
K G I + VFN + SW MI+ A HG+ +SL+ +++ D +TF+
Sbjct: 534 GKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIEREGSNLDSITFL 593
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+L+AC G+V G + F SMV +SI P EHY M D+LGR G LD+A + ++P
Sbjct: 594 SVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEELMHQIPG 653
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
P + SLLG+C+ H NVE+AE LI+++P + +V+++N+Y + G W+ VA +
Sbjct: 654 GPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGNWEKVAEV 713
Query: 473 KIAMRDTGFRKLPGCSVIECND----SVVEFYSLDERHPETESIYR--ALRGLTMLL 523
+ MR G +K G S ++ + + F S D+ HPE+E+I R GL M+
Sbjct: 714 RKGMRGRGVKKEVGFSWVDVANVDSLHLHGFSSGDKSHPESETIDRMAEFLGLQMIF 770
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 170/409 (41%), Gaps = 79/409 (19%)
Query: 3 HARKVFDKMPEPNTATWN-AMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
H +F+K+P+PN ++ N +M N + + V + ++ TL + ++
Sbjct: 36 HEHNLFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQTQFPFLQNIDEVTLALSFKA 95
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C G G Q+H GF + +L++MY G A VF + ++V W
Sbjct: 96 CR--GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSW 153
Query: 122 TAMISAY--------ISCG--------DVGSGRRLLDLAPERD----------------- 148
++S + +C D + L +RD
Sbjct: 154 NTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLV 213
Query: 149 --------VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFE 200
V + + +++ Y G + A +F++M RD++SWN +L+GYA G+ E
Sbjct: 214 VKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLE 273
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
V +L G R G D + +L + AC
Sbjct: 274 AV-------------LLFGNMVREGMLLDHV-----------------SLTGAISACGYT 303
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
L+ GK +H A+ +GY ++ V N LI Y+KC V+ A VF + R+++SW T+I
Sbjct: 304 KNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLI 363
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
+ + + +SLF+ M+ P+ VTF+G+L A T +V++G +
Sbjct: 364 S-----IDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLM 407
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 120/510 (23%), Positives = 194/510 (38%), Gaps = 115/510 (22%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVV--VLFAEMNRAAAAPLNHFTLPIVV--RSC 62
VF+ + P+ +WN + +G+ E D + F +N P+ + T R
Sbjct: 141 VFEGLSCPDIVSWNTILSGF---EKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDY 197
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G Q+H + K GF F+ AL+ MYS G + +A +VF EM R
Sbjct: 198 WDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIR------ 251
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD------------MVSARE 170
D+V W+ ++SGY + G+ MV
Sbjct: 252 -------------------------DLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGM 286
Query: 171 LFDKMPNRDVMS-----------------------------WNTLLNGYANSGDVGSFEK 201
L D + +S N L++ Y+ + +
Sbjct: 287 LLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKA 346
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
VF++M RNV SW LI N + F M V+G V PND T + +L A +
Sbjct: 347 VFQDMSARNVVSWTTLISIDEEN-----VVSLFNAMRVDG-VYPNDVTFIGLLHAITIRN 400
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+ G VH V N+LI MYAK I+ + +F L+ + ISWN +I+
Sbjct: 401 MVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALIS 460
Query: 322 GLAMHGNTADA-LSLFDQMKNSREQPDGVTFVGILSACT-------------HMGLVRDG 367
G A +G +A L+ +K + P+ TF +L+A H L++ G
Sbjct: 461 GYAQNGLCKEAFLTFLSAIKEIK--PNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLG 518
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
+ P + G + D+ G+ G ++++ + P E WT ++ A
Sbjct: 519 L----------NTDPFVA--GALLDMYGKRGNINESQRVFNETP-EKTQFSWTGMISAYA 565
Query: 428 THKNVEIAELAFQHLIELEPKNPANFVMLS 457
H + E + ++ IE E N + LS
Sbjct: 566 RHGDYE-SVMSLYKEIEREGSNLDSITFLS 594
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 13/228 (5%)
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPN--DFTLVAVLLACSR 259
+FE++P+ N S N + + AL FK + + N + TL AC
Sbjct: 40 LFEKIPQPNASSINRSMLNFLHKNLPFQALSVFKNQ-TQFPFLQNIDEVTLALSFKACR- 97
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
G +G +H + + G+ + V N+L+ MY K G E A+ VF L DI+SWNT+
Sbjct: 98 -GEFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTI 156
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRD-GFLY---FQSMV 375
++G + DAL+ M + D VT+ LS C D GFL+ S+V
Sbjct: 157 LSGFE---KSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLV 213
Query: 376 DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ + + R G LD+A +M + D V W ++L
Sbjct: 214 VKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIR-DLVSWNAML 260
>Medtr8g074780.1 | PPR containing plant-like protein | HC |
chr8:31617312-31615266 | 20130731
Length = 510
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 248/465 (53%), Gaps = 24/465 (5%)
Query: 72 EQVHCVAAKRGFKWNSFLCTALIEMYSAKG--SVGDAYKVFGEMPERNVVVWTAMISAYI 129
+Q H G K + F+ LI+ YS G +V A KVF ++ ER+V W +I Y
Sbjct: 37 KQTHAQIIIGGHKQDPFIAAKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYA 96
Query: 130 SCG------DVGSGRRLLDLAPERDVVMWSI--------VISGYIESGDMVSARELFDKM 175
+ G V + RL AP R + + + G I G++V FD
Sbjct: 97 NMGPFAEALHVYNAMRLSGAAPNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFD-- 154
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
+ N + YA ++ + KVF+EM ER++ SWN ++ GY NG +A+ F
Sbjct: 155 ----LFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFC 210
Query: 236 QMLVEGDV-VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
ML + + P++ TLV VL A + + G W+H Y G K + VG LI +Y+
Sbjct: 211 DMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSN 270
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG I A VF+ + R++I W+ +I MHG +ALS+F Q+ DG+ F+ +
Sbjct: 271 CGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSL 330
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
LSAC+H G+ +G+ FQ+M + Y ++ HY CM DLLGRAG L++A+ ++ MP++P
Sbjct: 331 LSACSHAGMHEEGWHLFQTM-ETYGVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQP 389
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
++ +LLGA R HKN+E+AELA + L L+P N +V+L+ +Y+D GRW+D ARL+
Sbjct: 390 GKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEGRWKDAARLRK 449
Query: 475 AMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
+R+ +K G S +E +F DE HP T I+ L L
Sbjct: 450 IIREKEIKKPIGYSSVELESGHKKFGVNDETHPLTTEIFETLVSL 494
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 12/316 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HARKVFD + E + WN + GY+ + + ++ M + AAP N +T P V+++C
Sbjct: 72 HARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGAAP-NRYTYPFVLKAC 130
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+G +H K G +++ F+ A + Y+ + + KVF EM ER++V W
Sbjct: 131 GAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRKVFDEMLERDIVSWN 190
Query: 123 AMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVSAR----ELF 172
+M+S YI+ G V L D D V+ + E D+ + +
Sbjct: 191 SMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIV 250
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D L+ Y+N G + + VF+++P+RNV W+ +I Y +G +AL
Sbjct: 251 KTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWSAIIRCYGMHGFAQEALS 310
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F+Q LVE + + +++L ACS G + G + E+ G ++D+
Sbjct: 311 MFRQ-LVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETYGVVKGEAHYACMVDLL 369
Query: 293 AKCGVIESAVDVFNCL 308
+ G +E A+++ +
Sbjct: 370 GRAGNLEKAMELIQSM 385
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPL-NHFTLPIVVRSC 62
+RKVFD+M E + +WN+M +GY + V+LF +M R ++ TL V+ +
Sbjct: 174 SRKVFDEMLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGFPDNATLVTVLPAF 233
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ + G +HC K G K + + LI +YS G + A VF ++P+RNV+VW+
Sbjct: 234 AEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIPDRNVIVWS 293
Query: 123 AMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
A+I Y G R+L++L D +++ ++S +G LF M
Sbjct: 294 AIIRCYGMHGFAQEALSMFRQLVELGLHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETY 353
Query: 179 DVMSWNTLLNGYAN-SGDVGSFEKVFEEM------PERNVY 212
V+ + G G+ EK E + P +NVY
Sbjct: 354 GVVKGEAHYACMVDLLGRAGNLEKAMELIQSMPIQPGKNVY 394
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
R S L F +E ++ F L C +D K H G+K + F+
Sbjct: 3 RVSRKLHQF----LEPNLQKTSFHYTDQLHHCK---TIDRIKQTHAQIIIGGHKQDPFIA 55
Query: 286 NALIDMYAKCG--VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
LID Y++ G +E A VF+ L RD+ WN +I G A G A+AL +++ M+ S
Sbjct: 56 AKLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSG 115
Query: 344 EQPDGVTFVGILSAC 358
P+ T+ +L AC
Sbjct: 116 AAPNRYTYPFVLKAC 130
>Medtr3g101700.1 | PPR containing plant-like protein | HC |
chr3:46826943-46824374 | 20130731
Length = 729
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/497 (30%), Positives = 266/497 (53%), Gaps = 18/497 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
++ +FD+M E + +WN M Y ++ F EM + P + + + +
Sbjct: 211 SQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSS-----VTIMNLV 265
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A A E VHC K GF ++ + T+L+ +Y+ +G A +++ P ++++ TA
Sbjct: 266 SANAFPE--NVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTA 323
Query: 124 MISAYISCGDVGSGRRL------LDLAPERDV---VMWSIVISGYIESGDMVSARELFDK 174
+IS+Y GD+ S LD+ P+ V+ I + G +
Sbjct: 324 IISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSG 383
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ N D + N L++ Y+ ++ + +F +M E+ + +WN +I G + G+ SDA+E F
Sbjct: 384 LSN-DCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELF 442
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M + G P+ T+ ++L C +LG L +G+ +H Y + F+G ALIDMY+K
Sbjct: 443 SEMSMCGKK-PDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSK 501
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
CG ++ A VF + + +WN +I+G +++G A + +++ +PD +TF+G+
Sbjct: 502 CGRLDYAEKVFYNIKDPCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGV 561
Query: 355 LSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEP 414
L+ACTH GLV G YF M Y ++P ++HY C+ LLG+ GL +A+ F+ KM ++P
Sbjct: 562 LAACTHGGLVYLGLEYFNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQP 621
Query: 415 DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKI 474
D+ +W +LL AC + V++ E + L L KN +V++SN+Y +GRW DVAR++
Sbjct: 622 DSAVWGALLNACCIQREVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVRE 681
Query: 475 AMRDTGFRKLPGCSVIE 491
M+D+G G SVI+
Sbjct: 682 MMKDSGGDGCSGVSVID 698
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 12/371 (3%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HAR +FD+M + +WN + GYS + LF +M R P N T+ ++ SC
Sbjct: 109 HARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFKP-NQTTIVSLLPSC 167
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ +G +H K GF +S L AL+ MY+ + + +F EM E++VV W
Sbjct: 168 GCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWN 227
Query: 123 AMISAYISCGDVGSG----RRLLD--LAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
MI Y G + +L P +M + + + E+ + F
Sbjct: 228 TMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFPENVHCYVVKCGF---- 283
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
D +L+ YA G + +++++ P +++ + +I Y+ G A+E F Q
Sbjct: 284 TNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQ 343
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
++ D+ P+ L+ VL + +G H Y G + V N LI +Y++
Sbjct: 344 T-IQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFD 402
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILS 356
IE+A+ +F + + +I+WN+MI+G G ++DA+ LF +M ++PD +T +LS
Sbjct: 403 EIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLS 462
Query: 357 ACTHMGLVRDG 367
C +G +R G
Sbjct: 463 GCCQLGNLRIG 473
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/523 (23%), Positives = 220/523 (42%), Gaps = 79/523 (15%)
Query: 14 PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS---------CSK 64
PN + ++++F + +V+F ++ +A P N FT +++++ C
Sbjct: 16 PNLSLFHSLFQ-----NATSPALVIFRQILQANVNP-NEFTFSLLIKAYLSSPSFTHCPS 69
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
A+ + Q+ KRG + T+LI++Y G A +F +M R+VV W +
Sbjct: 70 TAAL-QARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVL 128
Query: 125 ISAYISCGDVGSGRRLL------DLAPERDVVM--------WSIVISGYIESGDMVSARE 170
I Y G + +L + P + ++ + ++ G G + A
Sbjct: 129 ICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGF 188
Query: 171 LFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
D N N L++ YA D+ + + +F+EM E++V SWN +IG Y +NG F A
Sbjct: 189 GLDSHLN------NALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKA 242
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+ FK+ML EG P+ T++ + + A + VH Y G+ + V +L+
Sbjct: 243 ILYFKEMLKEG-FHPSSVTIMNL------VSANAFPENVHCYVVKCGFTNDASVVTSLVC 295
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
+YAK G +A ++ +D+I+ +I+ + G+ A+ F Q +PD V
Sbjct: 296 LYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVA 355
Query: 351 FVGILS----------ACTHMGL-VRDGF----LYFQSMVDHYSIIPQIE---------- 385
+G+L CT G V+ G L ++ YS +IE
Sbjct: 356 LIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMR 415
Query: 386 -----HYGCMADLLGRAGLLDQAVSFVRKMPM---EPDAVIWTSLLGACRTHKNVEIAEL 437
+ M +AG A+ +M M +PDA+ SLL C N+ I E
Sbjct: 416 EKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGET 475
Query: 438 AFQHLIELEPKNPANFV--MLSNIYKDLGRWQDVARLKIAMRD 478
+++ + +F+ L ++Y GR ++ ++D
Sbjct: 476 LHSYILRNNVR-VEDFIGTALIDMYSKCGRLDYAEKVFYNIKD 517
>Medtr1g059280.2 | pentatricopeptide (PPR) repeat protein | HC |
chr1:21517672-21518970 | 20130731
Length = 432
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/345 (41%), Positives = 204/345 (59%), Gaps = 3/345 (0%)
Query: 190 YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFT 249
YA G + VFE +PER+V S +I GYA+ G +ALE F+++ EG + N T
Sbjct: 2 YAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEG-MKSNYVT 60
Query: 250 LVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD 309
VL A S L ALD+GK VH + + + N+LIDMY+KCG + + +F+ +
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMY 120
Query: 310 RRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPDGVTFVGILSACTHMGLVRDGF 368
R +ISWN M+ G + HG + L LF M+ ++ +PD VT + +LS C+H GL G
Sbjct: 121 ERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKGL 180
Query: 369 LYFQSMVD-HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
F M + P++EHYGC+ DLLGR+G +++A F++KMP EP A IW SLLGACR
Sbjct: 181 NIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACR 240
Query: 428 THKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGC 487
H NV+I E A Q L+E+EP N N+V+LSN+Y GRW+DV+ L+ M K PG
Sbjct: 241 VHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPGR 300
Query: 488 SVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
S IE + + F++ D HP E I ++ L+ + GYVP+L
Sbjct: 301 SSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDL 345
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 13/245 (5%)
Query: 96 MYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG----DVGSGRRLLDLAPERDVVM 151
MY+ G + +A VF +PER+VV TA+IS Y G + RRL + + V
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 152 WSIVISGY-----IESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
++ V++ ++ G V L ++P+ V+ N+L++ Y+ G++ ++F+ M
Sbjct: 61 YTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQ-NSLIDMYSKCGNLTYSRRIFDTM 119
Query: 207 PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
ER V SWN ++ GY+++G + L+ F M E V P+ T++AVL CS G D G
Sbjct: 120 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 179
Query: 267 KWV--HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIIS-WNTMINGL 323
+ + + I + M ++D+ + G +E A + + + W +++
Sbjct: 180 LNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 239
Query: 324 AMHGN 328
+H N
Sbjct: 240 RVHSN 244
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 125/301 (41%), Gaps = 42/301 (13%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VF+ +PE + + A+ +GY+ + + LF + + N+ T V+ + S
Sbjct: 11 ARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRL-QGEGMKSNYVTYTGVLTALS 69
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
A+ G+QVH + L +LI+MYS G++ + ++F M ER V+ W A
Sbjct: 70 GLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTMYERTVISWNA 129
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSW 183
M+ Y G+ GR +L L RE P D ++
Sbjct: 130 MLVGYSKHGE---GREVLKL---------------------FTLMREETKVKP--DSVTI 163
Query: 184 NTLLNGYANSGDVGSFEKVFEEMP------ERNVYSWNVLIGGYARNGRFSDALEAFKQM 237
+L+G ++ G +F +M E + + ++ R+GR +A E K+M
Sbjct: 164 LAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKM 223
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI--GYKGNMFVGNALIDMYAKC 295
E P ++L AC +D+G++ I G GN + L ++YA
Sbjct: 224 PFE----PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVI---LSNLYASA 276
Query: 296 G 296
G
Sbjct: 277 G 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++R++FD M E +WNAM GYS R+V+ LF M + T+ V+
Sbjct: 109 LTYSRRIFDTMYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLS 168
Query: 61 SCSKAGAVREGEQVHCVAAKRGF----KWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-E 115
CS G +G + + K + C ++++ G V +A++ +MP E
Sbjct: 169 GCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGC--VVDLLGRSGRVEEAFEFIKKMPFE 226
Query: 116 RNVVVWTAMISA--YISCGDVG--SGRRLLDLAPERDVVMWSIVISGYIESG---DMVSA 168
+W +++ A S D+G +G++LL++ P + + I+ + Y +G D+ S
Sbjct: 227 PTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEP-GNAGNYVILSNLYASAGRWEDVSSL 285
Query: 169 RELF-----DKMPNRDVMSWNTLLNGYANS 193
R+L K P R + + +L+ + S
Sbjct: 286 RDLMLKKTVTKEPGRSSIELDQVLHTFHAS 315
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
MYAK G I A VF CL RD++S +I+G A G +AL LF +++ + + VT
Sbjct: 1 MYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYVT 60
Query: 351 FVGILSA 357
+ G+L+A
Sbjct: 61 YTGVLTA 67
>Medtr3g111500.1 | PPR containing plant-like protein | HC |
chr3:52097450-52094882 | 20130731
Length = 524
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 250/448 (55%), Gaps = 42/448 (9%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSA--KGSVGDAYKVFGEMPERNVVVWTAM 124
+++ +Q+H A S++ + ++ ++A +G A +F MP N+ + ++
Sbjct: 20 TMKQTKQIHAHAIANNLTRFSYISSRILAFFAASPRGDFRYAETLFTHMPNPNIFDYNSI 79
Query: 125 ISAYI--------------------------------SCGDVGSGRRLLDLAPER----D 148
I++Y SC + S ++ L + D
Sbjct: 80 ITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLVKSCVTLSSLEQVFTLTMKSGNSSD 139
Query: 149 VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE 208
V S VI+ + + G + AR++FD+ NR+V+ W +L++GY + G V VF++MP+
Sbjct: 140 VYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQ 199
Query: 209 RNVYSWNVLIGGYARNGRFSDALEAFKQMLVE----GDVVPNDFTLVAVLLACSRLGALD 264
RN S + ++ GY RN FS+ ++ F+++ + V N LV+VL AC+ +GA +
Sbjct: 200 RNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFE 259
Query: 265 MGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLA 324
GKW+H Y E G + ++ +G ALID YAKCG ++ A VF+ + +D+ +W+ MI GLA
Sbjct: 260 EGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVKDVATWSAMILGLA 319
Query: 325 MHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
++GN AL LF++M+ +P+ VTFVG+L+AC H L + F M + Y+I P I
Sbjct: 320 INGNNKMALELFEKMEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSI 379
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
EHYGC+ D+L R+G + +A+ F+ M +EPD IW SLL C H + E+ + ++LIE
Sbjct: 380 EHYGCIVDILARSGQVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIE 439
Query: 445 LEPKNPANFVMLSNIYKDLGRWQDVARL 472
+P++ +V+L+N+Y ++G+W+ V+ +
Sbjct: 440 FDPEHSGRYVLLANMYANMGKWEGVSEV 467
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 168/372 (45%), Gaps = 51/372 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +F MP PN +N++ Y+ + +F +M P +H T +V+SC
Sbjct: 60 YAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSH-TFTTLVKSC 118
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ EQV + K G + + +++I ++S G++ A +VF E RNVV WT
Sbjct: 119 VTLSSL---EQVFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNRNVVCWT 175
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD--- 179
+++S Y SCG V R + D P+R+ S ++SGY+ + +LF ++ +D
Sbjct: 176 SLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGR 235
Query: 180 ------------------VM------SW-----------------NTLLNGYANSGDVGS 198
VM W L++ YA G V
Sbjct: 236 ARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKD 295
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
EKVF++M ++V +W+ +I G A NG ALE F++M G PN+ T V VL AC+
Sbjct: 296 AEKVFDKMLVKDVATWSAMILGLAINGNNKMALELFEKMEKVGP-KPNEVTFVGVLTACN 354
Query: 259 RLGAL-DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISW 316
+ + + +E ++ ++D+ A+ G ++ A+ N + D W
Sbjct: 355 HKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQVKKALIFINSMHIEPDGAIW 414
Query: 317 NTMINGLAMHGN 328
+++NG MHG+
Sbjct: 415 GSLLNGCLMHGH 426
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 48/285 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA----AAAPLNHFTLP 56
+ R VFDKMP+ N A+ +AM +GY + V LF E+ + A N L
Sbjct: 187 VNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKKKDKGRARVKFNGALLV 246
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
V+ +C+ GA EG+ +H + G +++ L TALI+ Y+ G V DA KVF +M +
Sbjct: 247 SVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKCGWVKDAEKVFDKMLVK 306
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
+V W+AMI L LA +G+ A ELF+KM
Sbjct: 307 DVATWSAMI---------------LGLAI----------------NGNNKMALELFEKME 335
Query: 176 ---PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPER-----NVYSWNVLIGGYARNGRF 227
P + +++ +L + G ++F M E+ ++ + ++ AR+G+
Sbjct: 336 KVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSGQV 395
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY 272
AL M +E P+ ++L C G ++G+ V Y
Sbjct: 396 KKALIFINSMHIE----PDGAIWGSLLNGCLMHGHYELGQKVGKY 436
>Medtr5g043450.1 | PPR containing plant-like protein | HC |
chr5:19108134-19105482 | 20130731
Length = 828
Score = 275 bits (704), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 157/538 (29%), Positives = 274/538 (50%), Gaps = 22/538 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A+++F+ + + +T+ W +M + Y+ E + + +F +M + P N T+ V+ SC+
Sbjct: 257 AKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEP-NDVTMISVLNSCA 315
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G ++EG+ VHC + L ALI+ YSA + K+ + N+V W
Sbjct: 316 RLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWN 375
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVV---------MWSIVISGYIESGDMVSA----R 169
+IS Y G + ++ + + SG I+ G + R
Sbjct: 376 TLISFYAREGLNDEAMAFFACMVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKR 435
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
FD+ N+L++ Y+ G S +F ++ +++ +WN +I G+++NG +
Sbjct: 436 GFFDEFVQ------NSLMDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQNGISVE 489
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL F +M + + N T ++ + ACS LG LD GKW+H G + ++++ AL+
Sbjct: 490 ALSLFDEMF-KNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYIDTALV 548
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMYAKCG +++A VF+ + + ++SW+TMI +HG A SLF +M S +P+ V
Sbjct: 549 DMYAKCGDLQTAQKVFDSIVEKSVVSWSTMIAAHGIHGQINAATSLFHKMVLSNIKPNEV 608
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF+ ILSAC H G V++G YF +M D+Y I+P +EH+ + DLL RAG ++ A ++
Sbjct: 609 TFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGAYEIIKS 668
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
+ A IW +LL CR + +++ E + L + + + +LSNIY + G W +
Sbjct: 669 IRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEGGNWYES 728
Query: 470 ARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHG 527
+++ M G +K+PG S +E + + F S D + + I L L + G
Sbjct: 729 RKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEICMFLENFQSLAQEQG 786
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 218/468 (46%), Gaps = 48/468 (10%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNH--FTLPIVVRS 61
+R VF P P++ ++ + + R+V+ LF + + + F P V+R+
Sbjct: 52 SRLVFYTHPSPDSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRA 111
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
+ G + G ++H K GF + + T+L+ MY + DA KVF EM R++V+W
Sbjct: 112 VTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLW 171
Query: 122 TAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVIS-----GYIESGDMVSARELF 172
+++IS Y+ G G R ++ D VM V G + V +
Sbjct: 172 SSIISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMR 231
Query: 173 DKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ M +S N+L+ Y+ G + +++FE + +R+ W +I Y +N F +AL+
Sbjct: 232 EGMVGDGSLS-NSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALD 290
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA--ESIGYKGNMFVGNALID 290
F +M + +V PND T+++VL +C+RLG L GK VH + ++G G + +G ALID
Sbjct: 291 VFIKMQ-DSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTG-LDLGPALID 348
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVT 350
Y+ C + S + + + +I+SWNT+I+ A G +A++ F M PD +
Sbjct: 349 FYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPDSFS 408
Query: 351 FVGI-----------LSACTHMGLVRDGFL--YFQ-SMVDHYS----------IIPQIEH 386
H +++ GF + Q S++D YS I +I+H
Sbjct: 409 LASSISASASSGSIQFGQQIHGHVMKRGFFDEFVQNSLMDMYSKCGFASSAYTIFNKIKH 468
Query: 387 -----YGCMADLLGRAGLLDQAVSFVRKM---PMEPDAVIWTSLLGAC 426
+ CM + G+ +A+S +M +E + V + S + AC
Sbjct: 469 KSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQAC 516
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 157/325 (48%), Gaps = 23/325 (7%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+ R+CS +R Q+H N T L+E YS GS+ + VF P +
Sbjct: 7 LFRTCS---TLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSPD 63
Query: 118 VVVWTAMISAYI-----------SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMV 166
+++ +I ++ + G +L + ++ VI G+++
Sbjct: 64 SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKL----TQNCAFLYPSVIRAVTGVGELI 119
Query: 167 SARELFDKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
R+L ++ D + +L+ Y + +KVF+EM R++ W+ +I Y
Sbjct: 120 VGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYV 179
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
NG + + LE F+ M+ EG + P+ L++V AC ++G L + K VH Y G G+
Sbjct: 180 ENGVYREGLEMFRSMICEG-IRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDG 238
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS 342
+ N+LI MY++CG + A +F C+D R W +MI+ + +AL +F +M++S
Sbjct: 239 SLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDS 298
Query: 343 REQPDGVTFVGILSACTHMGLVRDG 367
+P+ VT + +L++C +G +++G
Sbjct: 299 EVEPNDVTMISVLNSCARLGRLKEG 323
>Medtr6g022140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7696262 | 20130731
Length = 857
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 280/532 (52%), Gaps = 21/532 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYS---LTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+R +FD + +WN++ + Y+ S+ +V L M+R A + +TL V+
Sbjct: 96 SRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYA-FSDYTLSSVLN 154
Query: 61 SCSKA--GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG--EMPER 116
+C G +H K G +N + TAL++MY+ G + DA +VF ++ +
Sbjct: 155 ACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSK 214
Query: 117 NVVVWTAMISAYI----SCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSA 168
N ++ AMI+ ++ C + R+ + + + +S V+ + +GD
Sbjct: 215 NDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVG 274
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
R++ ++ D ++L++ Y+ G++ + FE P+ +V SW I G +N
Sbjct: 275 RQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKN 334
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G+F + L F + L +G + ++F + +V+ AC+ + A G+ + YA G V
Sbjct: 335 GKFENGLSLFYRFLADGRKL-DEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVV 393
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N I MYAK G I+SA + F ++ D++SW+ MI A HG ++L LF+ M S
Sbjct: 394 KNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGI 453
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
P+ +T +G+L+AC+H GLV +G Y+++M Y + ++H C+ DLLGRAG L++A
Sbjct: 454 VPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQ 513
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
F+ E D V+W +LLGAC+ HK+ E+ + +IELEP A++V+L N+Y D+G
Sbjct: 514 RFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIELEPHEAASYVLLYNLYNDVG 573
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+ + ++ M+D G +K PG S IE ++V F D HP +E IY L
Sbjct: 574 KKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRSHPISELIYSRL 625
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 120/278 (43%), Gaps = 20/278 (7%)
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
G + A L + N+ N+L+N Y+ + + +F+ ++ SWN +I YA
Sbjct: 60 GQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119
Query: 223 RNGRFSDALEAFKQM--LVEGDVVPNDFTLVAVLLACSRLGALD----MGKWVHVYAESI 276
+ G + E F+ + + +D+TL +VL AC +D G+ +H + +
Sbjct: 120 KLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCF--CVDDNCFYGRLIHGFGIKL 177
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMINGLAMHG----NTA 330
G N+ V AL+DMYAK G + AV VF D ++ +N MI G G N
Sbjct: 178 GLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAR 237
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+A+ +F++M+ + TF ++ AC G G V S+ +
Sbjct: 238 EAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVG-RQIHGQVLKNSLEGDEFVASSL 296
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEP--DAVIWTSLLGAC 426
DL G +D +R M P D V WTS + C
Sbjct: 297 VDLYSFFGEIDDG---LRCFEMTPKLDVVSWTSAIAGC 331
>Medtr6g022140.2 | pentatricopeptide (PPR) repeat protein | HC |
chr6:7700828-7697127 | 20130731
Length = 774
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 280/532 (52%), Gaps = 21/532 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYS---LTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+R +FD + +WN++ + Y+ S+ +V L M+R A + +TL V+
Sbjct: 96 SRFLFDNSSIKDNVSWNSIISAYAKLGTKTSYGEVFQLVYRMHRFGYA-FSDYTLSSVLN 154
Query: 61 SCSKA--GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG--EMPER 116
+C G +H K G +N + TAL++MY+ G + DA +VF ++ +
Sbjct: 155 ACCFCVDDNCFYGRLIHGFGIKLGLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSK 214
Query: 117 NVVVWTAMISAYI----SCGDVGSGRRLLD----LAPERDVVMWSIVISGYIESGDMVSA 168
N ++ AMI+ ++ C + R+ + + + +S V+ + +GD
Sbjct: 215 NDFMYNAMIAGFLRGGLCCENAREAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVG 274
Query: 169 RELFDKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
R++ ++ D ++L++ Y+ G++ + FE P+ +V SW I G +N
Sbjct: 275 RQIHGQVLKNSLEGDEFVASSLVDLYSFFGEIDDGLRCFEMTPKLDVVSWTSAIAGCVKN 334
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G+F + L F + L +G + ++F + +V+ AC+ + A G+ + YA G V
Sbjct: 335 GKFENGLSLFYRFLADGRKL-DEFIVSSVMGACADMAAARTGEQIQGYALKFGVADFTVV 393
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N I MYAK G I+SA + F ++ D++SW+ MI A HG ++L LF+ M S
Sbjct: 394 KNTQICMYAKSGDIDSARNTFQETEKPDVVSWSVMICSYAQHGFAKESLRLFELMTVSGI 453
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
P+ +T +G+L+AC+H GLV +G Y+++M Y + ++H C+ DLLGRAG L++A
Sbjct: 454 VPNQITLLGVLTACSHGGLVDEGLGYYETMKKDYGMAANVKHSACIVDLLGRAGRLEEAQ 513
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
F+ E D V+W +LLGAC+ HK+ E+ + +IELEP A++V+L N+Y D+G
Sbjct: 514 RFIYDSGFEDDPVLWRALLGACKVHKDTEMGKRIADKVIELEPHEAASYVLLYNLYNDVG 573
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+ + ++ M+D G +K PG S IE ++V F D HP +E IY L
Sbjct: 574 KKKHALEVRKLMQDRGVKKEPGISWIEVGNTVHTFLVDDRSHPISELIYSRL 625
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 20/285 (7%)
Query: 163 GDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
G + A L + N+ N+L+N Y+ + + +F+ ++ SWN +I YA
Sbjct: 60 GQTIHASILINGFLNKTSSFLNSLINMYSKCNQIQTSRFLFDNSSIKDNVSWNSIISAYA 119
Query: 223 RNGRFSDALEAFKQM--LVEGDVVPNDFTLVAVLLACSRLGALD----MGKWVHVYAESI 276
+ G + E F+ + + +D+TL +VL AC +D G+ +H + +
Sbjct: 120 KLGTKTSYGEVFQLVYRMHRFGYAFSDYTLSSVLNACCF--CVDDNCFYGRLIHGFGIKL 177
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMINGLAMHG----NTA 330
G N+ V AL+DMYAK G + AV VF D ++ +N MI G G N
Sbjct: 178 GLDFNVVVATALLDMYAKSGCLRDAVRVFEGFDLKSKNDFMYNAMIAGFLRGGLCCENAR 237
Query: 331 DALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCM 390
+A+ +F++M+ + TF ++ AC G G V S+ +
Sbjct: 238 EAVRVFNEMRRMGVKCSKFTFSSVVKACVGNGDFEVG-RQIHGQVLKNSLEGDEFVASSL 296
Query: 391 ADLLGRAGLLDQAVSFVRKMPMEP--DAVIWTSLLGACRTHKNVE 433
DL G +D +R M P D V WTS + C + E
Sbjct: 297 VDLYSFFGEIDDG---LRCFEMTPKLDVVSWTSAIAGCVKNGKFE 338
>Medtr3g005330.1 | PPR containing plant-like protein | HC |
chr3:156847-154639 | 20130731
Length = 479
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/456 (33%), Positives = 255/456 (55%), Gaps = 25/456 (5%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
TL + CS ++ Q+H GF N L +I + ++ A VF ++
Sbjct: 14 TLMNLFNHCSTLNHLK---QIHARIFLTGFNHNLILSGKIIMFCAVSQNMNYALNVFDKI 70
Query: 114 PERNVVVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVIS-----GYIESGD 164
P+ + +W MI + + + + LA D +S ++ ++ G
Sbjct: 71 PKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDNFTFSFILKIIARLRFVNLGK 130
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ LF N+L++ Y D+ ++FEEM + N+ SWN +I +
Sbjct: 131 QLHC-SLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVSWNSIIDCHVYC 189
Query: 225 GRFSDALEAFKQMLVEG----DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE----SI 276
G++++A++ F +M+ + ++ P+ TLV L AC +G+LD G+ VH + S
Sbjct: 190 GKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSF 249
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G ++F NAL+DMYAKCG +E A + F+ + R++++SWN MI G A HGN +AL+LF
Sbjct: 250 GESISVF--NALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHGNGEEALALF 307
Query: 337 DQMKNSR-EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLG 395
+M + E+PD +TF+ +L AC+H GLV +G YF+ M Y+I P I+HYGCM DLLG
Sbjct: 308 TRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLG 367
Query: 396 RAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVM 455
RAGL +A ++ MP+E +A+IW +LL ACR + NVE+ E +HL+ELEP + +++V+
Sbjct: 368 RAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVL 427
Query: 456 LSNIYKDLGRWQDVARLKIAMRDTGFRK-LPGCSVI 490
L+N+Y G+W ++++ + +M++ RK PG S I
Sbjct: 428 LANMYASTGQWNEMSKERRSMQERRVRKPEPGNSFI 463
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 165/345 (47%), Gaps = 18/345 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A VFDK+P+P++ WN M G+ + +H + F + + A P N FT +++
Sbjct: 60 MNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLAHRPDN-FTFSFILK 118
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
++ V G+Q+HC K GF+ ++++ +LI MY + A+++F EM + N+V
Sbjct: 119 IIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEEMYQPNLVS 178
Query: 121 WTAMISAYISCGDVGSGRRL-----------LDLAPERDVVMWSIVISGYIESGDMVSAR 169
W ++I ++ CG L ++L P+ ++ ++ G I S D
Sbjct: 179 WNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKV 238
Query: 170 ELFDK----MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
F + + +N L++ YA G V + F M +NV SWNV+I G+A +G
Sbjct: 239 HSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVSWNVMILGFASHG 298
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFV 284
+AL F +ML E P++ T + VL ACS G +D G ++ + K +
Sbjct: 299 NGEEALALFTRMLHENVERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKH 358
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
++D+ + G+ A ++ + + I W T++ +GN
Sbjct: 359 YGCMVDLLGRAGLFVEAYELIKSMPVECNAIIWRTLLAACRNYGN 403
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 6/151 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + F M N +WN M G++ + + + LF M + T V+ +CS
Sbjct: 272 AYETFSNMKRKNVVSWNVMILGFASHGNGEEALALFTRMLHENVERPDEITFLCVLCACS 331
Query: 64 KAGAVREGEQVHCVAAK-RGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNVVVW 121
G V EG + + + K ++++ G +AY++ MP E N ++W
Sbjct: 332 HGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVEAYELIKSMPVECNAIIW 391
Query: 122 TAMISAYISCGDVGSG----RRLLDLAPERD 148
+++A + G+V G + L++L P+
Sbjct: 392 RTLLAACRNYGNVELGEKVRKHLMELEPDHS 422
>Medtr5g044260.1 | PPR containing plant-like protein | HC |
chr5:19452918-19451090 | 20130731
Length = 565
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/480 (34%), Positives = 263/480 (54%), Gaps = 36/480 (7%)
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+++ ++ +Q+H + NSF LI+ YS K ++ ++ ++++
Sbjct: 22 NQSNSISHVKQIHAQILRTIHTPNSFTWNILIQSYS-KSTLHK---------QKAILLYK 71
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES---GDMVSARELFDKMP-NR 178
A+I+ + +L P++ + + Y+ S G V A L K+
Sbjct: 72 AIIT-----------EQENELFPDKHTYPFVLKACAYLFSLFEGKQVHAHVL--KLGFEL 118
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQM 237
D N+L++ YA+ G + + KVF+ M E RNV SWNV+I YA+ G + L F +M
Sbjct: 119 DTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVSWNVMIDSYAKVGDYDIVLIMFCEM 178
Query: 238 LVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG---NMFVGNALIDMYAK 294
+ + P+ +T+ +V+ AC LG+L +G WVH + K ++ V L+DMY K
Sbjct: 179 MKVYE--PDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNTCLVDMYCK 236
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KNSREQPDGVTFVG 353
CG +E A VF + RD+ SWN++I G A+HG AL F +M K + P+ +TFVG
Sbjct: 237 CGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEKIVPNSITFVG 296
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+LSAC H G+V +G +YF+ M Y++ P + HYGC+ DL RAG + +A++ V +MP++
Sbjct: 297 VLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEALNVVSEMPIK 356
Query: 414 PDAVIWTSLLGAC-RTHKNVEIAELAFQHLIELEPKNPAN-FVMLSNIYKDLGRWQDVAR 471
PDAVIW SLL AC + H +VE++E + + E +V+LS +Y RW DV
Sbjct: 357 PDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYASASRWNDVGL 416
Query: 472 LKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
L+ M D G K PGCS+IE N + EF++ D HP+++ IY+ + + L GY+P+
Sbjct: 417 LRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQEKLESVGYLPD 476
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 18/334 (5%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEM----NRAAAAPLNHFTLPIVVRS 61
++ + PN+ TWN + YS + H+ +L + P H T P V+++
Sbjct: 36 QILRTIHTPNSFTWNILIQSYSKSTLHKQKAILLYKAIITEQENELFPDKH-TYPFVLKA 94
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVV 120
C+ ++ EG+QVH K GF+ ++++C +LI Y++ G + A KVF M E RNVV
Sbjct: 95 CAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETARKVFDRMCEWRNVVS 154
Query: 121 WTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVIS----GYIESGDMVSAREL- 171
W MI +Y GD ++ + M S++ + G + G V A L
Sbjct: 155 WNVMIDSYAKVGDYDIVLIMFCEMMKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLK 214
Query: 172 -FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
DK DV+ L++ Y G + ++VFE M R+V SWN +I G+A +G+ A
Sbjct: 215 KCDKNVVCDVLVNTCLVDMYCKCGSLEIAKQVFEGMSYRDVSSWNSIILGFAVHGKAKAA 274
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALI 289
L+ F +M+ +VPN T V VL AC+ G +D G + + + + ++ L+
Sbjct: 275 LDYFVRMVKVEKIVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLV 334
Query: 290 DMYAKCGVIESAVDVFNCLD-RRDIISWNTMING 322
D+YA+ G I+ A++V + + + D + W ++++
Sbjct: 335 DLYARAGHIQEALNVVSEMPIKPDAVIWRSLLDA 368
>Medtr5g008260.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:1721493-1719058 | 20130731
Length = 774
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 179/561 (31%), Positives = 271/561 (48%), Gaps = 37/561 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +AR +FD+MP N +W + +GY+ R+ LF+ M A P N F V+
Sbjct: 131 LDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFRP-NEFAFASVLC 188
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYS-AKGSVG--------DAYKVFG 111
+C + V+ G QVH A K ++ ++ ALI MYS G G DA+ VF
Sbjct: 189 ACEEQD-VKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFK 247
Query: 112 EMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD--MVSAR 169
M RN++ W +MIS + G L + S + G + S + M ++
Sbjct: 248 SMEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSD 307
Query: 170 ELFDKMPNRDVMSWN----------------TLLNGYANSGDVGS--FEKVFEEMPERNV 211
++ + ++ + L+ YA+ G S F+ + E ++
Sbjct: 308 DINNTHHLKNCFQLHCLTVKSGLISEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDI 367
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
SW +I +A A F Q+ E + V + T L AC+ VH
Sbjct: 368 VSWTAIISVFAERDP-EQAFLLFCQLHRE-NFVLDRHTFSIALKACAYFVTEKNATEVHS 425
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
G+ + V NALI Y + G + + VF + D++SWN+M+ A+HG D
Sbjct: 426 QVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVFTEMGCHDLVSWNSMLKSYAIHGRAKD 485
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL LF QM PD TFV +L+AC+H GLV +G F SM + + I P ++HY CM
Sbjct: 486 ALDLFKQMD---VHPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMV 542
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
DL GRAG + +A +RKMPM+PD+VIW+SLLG+CR H ++A+LA L+PKN
Sbjct: 543 DLYGRAGKIFEAEELIRKMPMKPDSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSL 602
Query: 452 NFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETES 511
++ +SNIY G + + ++ MRD+ RK PG S +E V EF S + HP+ ++
Sbjct: 603 AYIQMSNIYSSGGSFIEAGLIRKEMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQA 662
Query: 512 IYRALRGLTMLLRLHGYVPNL 532
I L L L+ GY P +
Sbjct: 663 ILSRLETLIGQLKEMGYAPEI 683
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 104/213 (48%), Gaps = 15/213 (7%)
Query: 159 YIESGDMVSARELFDKMP--NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNV 216
YI+ G M + +K P D+ N LLN Y G + +F++MP RN SW V
Sbjct: 93 YIKQG-MALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTV 151
Query: 217 LIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
L+ GYA+ G + F ML PN+F +VL AC + G VH A +
Sbjct: 152 LVSGYAQFGLIRECFALFSGML--ACFRPNEFAFASVLCACEEQD-VKYGLQVHAAALKM 208
Query: 277 GYKGNMFVGNALIDMYAKC-----GVIESAVD----VFNCLDRRDIISWNTMINGLAMHG 327
+++V NALI MY+KC G + D VF ++ R++ISWN+MI+G G
Sbjct: 209 SLDFSVYVANALITMYSKCSGGFGGSCDQTTDDAWMVFKSMEYRNLISWNSMISGFQFRG 268
Query: 328 NTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A+ LF M + + + T +G+LS+ H
Sbjct: 269 LGDKAIGLFAHMYCNGIRFNSTTLLGVLSSLNH 301
>Medtr3g027990.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:8840204-8842727 | 20130731
Length = 623
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 158/501 (31%), Positives = 267/501 (53%), Gaps = 23/501 (4%)
Query: 47 AAPLNHF-----TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG 101
A +HF TL + ++S S R +H K + F+ L+ Y G
Sbjct: 38 AISTHHFDPFLSTLILHLKSSSSVSICR---IIHAHVIKSLDYRDGFIGDQLVSCYLKMG 94
Query: 102 SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLL-----DLAPERDVVMWSIVI 156
DAY +F EMP+++ V W +++S G +G + D + + + VI
Sbjct: 95 PTKDAYLLFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVI 154
Query: 157 SGYI-----ESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE--R 209
S + + G V + + +V N L+N Y G V S ++F EMPE +
Sbjct: 155 SACVSEKACDEGYYVHCCAMKLGLV-YEVKVVNALVNMYGKFGFVESAFRLFSEMPESEK 213
Query: 210 NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
++ SWN ++ A+NG ++A F M V G P+D T+V++L AC M + +
Sbjct: 214 SIVSWNSIVAVCAQNGMPNEAFNCFDMMRVNG-FFPDDATMVSLLQACENFPLGRMVEVL 272
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
H + G N+ + L+++Y+K G + ++ VF + + D ++W M+ G AMHG
Sbjct: 273 HGVIFTCGLDENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCG 332
Query: 330 ADALSLFDQM-KNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYG 388
+A+ F+++ + +PD VTF +LSAC+H GLV++G +F+ M D Y + P+++HY
Sbjct: 333 KEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYS 392
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK 448
CM DLLGR GLLD A ++ MP EP++ +W +LLGACR H+N+++ + A ++LI L+P
Sbjct: 393 CMVDLLGRCGLLDDAHELIKNMPFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPS 452
Query: 449 NPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPE 508
+P N++MLSN+Y G W D ++++ M++ + GCS IE + + F D HP+
Sbjct: 453 DPRNYIMLSNMYSAAGLWNDASKVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPD 512
Query: 509 TESIYRALRGLTMLLRLHGYV 529
+ I++ L + ++ G+V
Sbjct: 513 SHRIHKKLEEVMKKIQDVGFV 533
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 150/306 (49%), Gaps = 11/306 (3%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+FD+MP+ + +WN++ +G + + + +F +M + LN FT V+ +C
Sbjct: 102 LFDEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEK 161
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP--ERNVVVWTAM 124
A EG VHC A K G + + AL+ MY G V A+++F EMP E+++V W ++
Sbjct: 162 ACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSI 221
Query: 125 ISAYISCGDVGSGRRLLDLA------PERDVVMWSIVISGYIESGDMVSARE--LFDKMP 176
++ G D+ P+ ++ + G MV +F
Sbjct: 222 VAVCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGL 281
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
+ ++ TLLN Y+ G + + KVFEE+ + + +W ++ GYA +G +A+E F++
Sbjct: 282 DENLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFER 341
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKW-VHVYAESIGYKGNMFVGNALIDMYAKC 295
++ E + P+ T +L ACS G + GK+ V ++ + + + ++D+ +C
Sbjct: 342 IVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRC 401
Query: 296 GVIESA 301
G+++ A
Sbjct: 402 GLLDDA 407
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ ++RKVF+++ +P+ W AM GY++ ++ + F + R +H T ++
Sbjct: 301 LNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVTFTHLLS 360
Query: 61 SCSKAGAVREGEQVHCVAA---KRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ER 116
+CS +G V+EG+ V + K + + + C ++++ G + DA+++ MP E
Sbjct: 361 ACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSC--MVDLLGRCGLLDDAHELIKNMPFEP 418
Query: 117 NVVVWTAMISAYISCGDVGSGRR------LLDLAPERDVVMWSIVISG 158
N VW A++ A ++ G+ LD + R+ +M S + S
Sbjct: 419 NSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSA 466
>Medtr4g073930.1 | PPR containing plant-like protein | HC |
chr4:28099513-28096632 | 20130731
Length = 597
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 170/539 (31%), Positives = 261/539 (48%), Gaps = 73/539 (13%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYK 108
L+ L ++R CS + +EG+ VH GFK + + LI MY G A K
Sbjct: 43 LSSHILATLLRRCSDTKSYKEGKLVHLHLKLTGFKRPTTLIANHLIHMYFCCGDYVRARK 102
Query: 109 VFGEM-------------------------------PERNVVVWTAMISAYISCGDVGSG 137
VF +M PE++ V W AM+ Y CG
Sbjct: 103 VFDKMDVRNLYSWNNMISGYVKLGMMKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEA 162
Query: 138 RR--------------------------LLDLAPERDVVMWSIVI-------------SG 158
R L + R + +V+
Sbjct: 163 LRFYGWMRRVCVGYNEFTFASVLIVCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDA 222
Query: 159 YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
Y + G M A LFD M RD+ +W TL++GYA GD+ S ++F +MP++N YSW LI
Sbjct: 223 YAKCGKMEDAMRLFDDMTVRDIPAWTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALI 282
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
GGYARNG AL F++M++ V P++FT + L AC+ + +L GK +H +
Sbjct: 283 GGYARNGMAHKALGVFRKMIMH-RVRPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNI 341
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGNTADALSLFD 337
+ N V +A++DMYAKCG +E+A +FN + +D++ WNTMI+ LA +G +A+ + +
Sbjct: 342 RPNPVVVSAVVDMYAKCGSMETARRIFNFTEHMQDVVLWNTMISALAHYGYGKEAVLMLN 401
Query: 338 QMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA 397
M S +P+ T V IL+AC+H GLV DG +F+SM + + +IP +EHY + DLLGRA
Sbjct: 402 DMLKSGVKPNRNTLVAILNACSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRA 461
Query: 398 GLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
G +++ + + +P + SLL CR + ++ + + LI+ +P + A + +LS
Sbjct: 462 GCFVESMKDLFMIDCKPGDHVLYSLLCVCRPNGSIGVGREVAEFLIKWQPHSSAAYGLLS 521
Query: 458 NIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
+IY L W V + M + R+ S IE + V F D HP E++Y AL
Sbjct: 522 SIYAALVTWGLVDEARHIMDERRLRQDRSTSWIEIENEVHAFTVSDGLHPLKETLYSAL 580
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 150/351 (42%), Gaps = 52/351 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M AR VF KMPE + +WNAM GY+ + + + M R N FT V+
Sbjct: 128 MKQARGVFYKMPEKDCVSWNAMVVGYAHCGRFSEALRFYGWMRRVCVG-YNEFTFASVLI 186
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C K Q+H GF N + +++++ Y+ G + DA ++F +M R++
Sbjct: 187 VCVKLKEFELCRQIHGQVVVVGFLSNVVVSSSIVDAYAKCGKMEDAMRLFDDMTVRDIPA 246
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
WT ++S Y CGD+ S + P+++ W+ +I GY +G A +F KM
Sbjct: 247 WTTLVSGYALCGDMDSAAEMFSQMPKKNTYSWTALIGGYARNGMAHKALGVFRKMIMHRV 306
Query: 176 ------------------------------------PNRDVMSWNTLLNGYANSGDVGSF 199
PN V+S +++ YA G + +
Sbjct: 307 RPDEFTFSSCLFACATIASLKHGKQIHAFLLRNNIRPNPVVVS--AVVDMYAKCGSMETA 364
Query: 200 EKVF---EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
++F E M ++V WN +I A G +A+ ML G V PN TLVA+L A
Sbjct: 365 RRIFNFTEHM--QDVVLWNTMISALAHYGYGKEAVLMLNDMLKSG-VKPNRNTLVAILNA 421
Query: 257 CSRLGAL-DMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV-IESAVDVF 305
CS G + D ++ G ++ LID+ + G +ES D+F
Sbjct: 422 CSHSGLVCDGLQFFKSMTNDHGVIPDLEHYAHLIDLLGRAGCFVESMKDLF 472
>Medtr5g024100.1 | PPR containing plant-like protein | HC |
chr5:9654442-9656866 | 20130731
Length = 754
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/496 (30%), Positives = 262/496 (52%), Gaps = 17/496 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
RK+FD M + + W++M +GY++ + V F +M R L+ L +++C
Sbjct: 262 CRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRV-KLDQHVLSSTLKACV 320
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ + G QVH + K G + + F+ + L+ +Y++ G +GD K+F + ++++V W +
Sbjct: 321 EIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNS 380
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSI-------VISGYIESGDMVSARELFDKMP 176
MI A G G GR + R I V+ + D+ + R++ +
Sbjct: 381 MILAQARPGQ-GCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIV 439
Query: 177 N----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
R + N L++ Y+ + K F ++ ++ SW+ +IG +N S ALE
Sbjct: 440 KSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALE 499
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
K+ML EG + ++L + ACS+L + GK +HV+A GY ++++G+++IDMY
Sbjct: 500 LCKEMLDEG-INFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMY 558
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
AKCG IE + VF+ + + +++N +I+G A HG A+ + +++ + P+ VTF+
Sbjct: 559 AKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFL 618
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
++SAC+H G V + F M+D Y I P+ EHY C+ D GRAG L++A V+K
Sbjct: 619 ALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIVQKDGS 678
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
E W +LL ACR H N +I E + +IEL P + A +++LSNIY + G W++
Sbjct: 679 ES---AWRTLLSACRNHSNRKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNC 735
Query: 473 KIAMRDTGFRKLPGCS 488
+ M +K PG S
Sbjct: 736 RKKMAKIRVKKDPGNS 751
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/442 (26%), Positives = 204/442 (46%), Gaps = 23/442 (5%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A K+FDKMP N TW + + + S +F M + P N T +++R+C
Sbjct: 60 YAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERP-NENTFAVLLRAC 118
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKG-SVGDAYKVFGEMPERNVVVW 121
+ G Q+H + + G + F ++L+ MY G + DA +VF + ER+VV W
Sbjct: 119 TNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAW 178
Query: 122 TAMISAYISCGDVGSGRRLLD-------LAPERDVVMWSIVISGYIESGDMVSARELFDK 174
MIS + GD +RL L P+R + S++ + + M ++
Sbjct: 179 NVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDR-ITFASLLKCCSVLNEVMQIHGIVYKF 237
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
DV+ + +++ YA DV S K+F+ M +++ + W+ +I GY N R +A+ F
Sbjct: 238 GAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFF 297
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
K M + V + L + L AC + L+ G VH G++ + FV + L+++YA
Sbjct: 298 KDMCRQ-RVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYAS 356
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN-TADALSLFDQMKNSR-EQPDGVTFV 352
G + +F+ +D +DI++WN+MI A G + LF +++ + Q G T V
Sbjct: 357 FGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLV 416
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA----VSFVR 408
+L +C + G S++ S+ + + +D A V VR
Sbjct: 417 AVLKSCEKDSDLPAG-RQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVR 475
Query: 409 KMPMEPDAVIWTSLLGACRTHK 430
K D W+S++G C+ ++
Sbjct: 476 K-----DDSSWSSIIGTCKQNR 492
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 120/519 (23%), Positives = 230/519 (44%), Gaps = 59/519 (11%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +VF + E + WN M +G++ R V LF+EM + T +++ CS
Sbjct: 163 ALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS 222
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ E Q+H + K G + + + +A++++Y+ V K+F M +++ VW++
Sbjct: 223 ---VLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSS 279
Query: 124 MISAYISCGDVGSGRRLL-DLAPER---DVVMWSIVISGYIESGDMVSARELFDKM---- 175
MIS Y D+ +R D + S + +E D+ + ++ M
Sbjct: 280 MISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNG 339
Query: 176 PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR-FSDALEAF 234
D + LLN YA+ G++G EK+F + ++++ +WN +I AR G+ ++ F
Sbjct: 340 HQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLF 399
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+++ + TLVAVL +C + L G+ +H + VGNAL+ MY++
Sbjct: 400 QELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSE 459
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG- 353
C I+ A F + R+D SW+++I + + AL L +M + +G+ F
Sbjct: 460 CKQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLD-----EGINFTSY 514
Query: 354 ----ILSACT-----------HMGLVRDGF---LYF-QSMVDHYSIIPQIEH-------- 386
+SAC+ H+ ++ G+ +Y S++D Y+ IE
Sbjct: 515 SLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQ 574
Query: 387 -------YGCMADLLGRAGLLDQAVSFVRKMP---MEPDAVIWTSLLGACRTHKNVEIAE 436
+ + G QA+ + K+ + P+ V + +L+ AC VE
Sbjct: 575 LKPNEVTFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETS 634
Query: 437 LAFQHLIE---LEPKNPANFVMLSNIYKDLGRWQDVARL 472
F +++ ++PK+ ++ L + Y GR ++ ++
Sbjct: 635 HLFTLMLDKYKIKPKSE-HYSCLVDAYGRAGRLEEAYQI 672
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 43/279 (15%)
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------P 176
++S Y + +L D P R+VV W+ +IS +++ G + A E+F+ M P
Sbjct: 47 TLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERP 106
Query: 177 N---------------------------------RDVMSWNTLLNGYANSGD-VGSFEKV 202
N R+ + ++L+ Y GD + +V
Sbjct: 107 NENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRV 166
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F + ER+V +WNV+I G+A+NG F F +M E + P+ T ++L CS L
Sbjct: 167 FYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCSVLNE 226
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
+ +H G + ++ V +A++D+YAKC + S +F+ ++++D W++MI+G
Sbjct: 227 V---MQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISG 283
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
M+ +A++ F M R + D L AC +
Sbjct: 284 YTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEI 322
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 156/343 (45%), Gaps = 23/343 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+G K+F ++ + + WN+M + + + LF E+ R + TL V+
Sbjct: 360 LGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCGRCMQLFQELRRTTFLQIQGATLVAVL 419
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+SC K + G Q+H + K ++ + AL+ MYS + DA+K F ++ ++
Sbjct: 420 KSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDS 479
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPER-----DVVMWS--IVISGYIESGDMVSAREL- 171
W+++I +C + L+L E + +S + IS + + ++L
Sbjct: 480 SWSSIIG---TCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLH 536
Query: 172 ---FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ DV +++++ YA G++ EKVF+E + N ++N +I GYA +G+
Sbjct: 537 VFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQ 596
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA---ESIGYKGNMFVG 285
A+E ++ G V PN T +A++ ACS G ++ + H++ + K
Sbjct: 597 QAIEVLSKLEKNG-VAPNHVTFLALMSACSHAGYVE--ETSHLFTLMLDKYKIKPKSEHY 653
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
+ L+D Y + G +E A + +W T+++ H N
Sbjct: 654 SCLVDAYGRAGRLEEAYQIVQKDGSES--AWRTLLSACRNHSN 694
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 269 VHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGN 328
+H Y + N L+ Y+K A +F+ + R++++W T+I+ +G+
Sbjct: 29 IHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGS 88
Query: 329 TADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
+ A +F+ M+ S E+P+ TF +L ACT+ L
Sbjct: 89 VSKAFEMFNHMRVSDERPNENTFAVLLRACTNREL 123
>Medtr2g072010.1 | PPR containing plant-like protein | HC |
chr2:30162883-30164901 | 20130731
Length = 515
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 165/494 (33%), Positives = 264/494 (53%), Gaps = 44/494 (8%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+ARK+FDKMPE TAT+NAM +GY L L E+ R F P+ C
Sbjct: 24 NARKLFDKMPERTTATYNAMISGYILKARKFH---LAEELYREVPC---EFRDPV----C 73
Query: 63 SKA---GAVREGEQVHCVAAKRGF---KWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
S A G ++ GE + K + +A++ G +G A K+F MPER
Sbjct: 74 SNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYARKLFDRMPER 133
Query: 117 NVVVWTAMISAYISCGDVGSG-------RRLLDLAPERDVVMWSIVISGYIESGDMV--- 166
NVV W+AMI Y+ G +G RR + E + +I+I G G +
Sbjct: 134 NVVSWSAMIDGYMEKGLFENGFGFFLEMRR--EGVVEVNSTTMTIMIKGCGNCGGVKDGM 191
Query: 167 ---------------SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNV 211
+A E+F++MP +D++SW ++ + G +G ++F+ + E++
Sbjct: 192 QIHGLVSRLGFEFVDAAYEVFERMPEKDLISWTAMIRRFVTDGRMGKPVELFDTLKEKDD 251
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHV 271
+ W VLI G+ N + +AL + +M EG PN T+ +VL A + L AL+ G +H
Sbjct: 252 FVWTVLISGFVSNEEYEEALCWYVRMNREG-CKPNPLTISSVLAASASLVALNEGLQIHS 310
Query: 272 YAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTAD 331
+ + + ++ + N+LI YAKCG + A +F + +++S N++ING +G +
Sbjct: 311 HVLKMNLEYDLSIQNSLISFYAKCGNVTDAYKIFVDVVELNVVSNNSVINGFTQNGFGEE 370
Query: 332 ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMA 391
AL+++ +M+N +P+ VTF+ +LSACTH GL+ +G F +M Y P +HY CM
Sbjct: 371 ALNMYKRMQNESLEPNRVTFLAVLSACTHAGLIEEGRNLFDTMKSRYRNEPDADHYACMV 430
Query: 392 DLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPA 451
DLLGRAGLLD+A +R + ++P + +W +LL A H +++A+LA QH+ +LEP N
Sbjct: 431 DLLGRAGLLDEANDLIRSITVKPHSGVWGALLAASSAHLRLDLAKLAAQHITKLEPANAT 490
Query: 452 NFVMLSNIYKDLGR 465
+V+LSN+Y G+
Sbjct: 491 PYVVLSNLYSAAGQ 504
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 170/349 (48%), Gaps = 60/349 (17%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+ARK+FD+MPE N +W+AM +GY + F EM R +N T+ I+++
Sbjct: 120 IGYARKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIK 179
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C G V++G Q+H + ++ GF++ V AY+VF MPE++++
Sbjct: 180 GCGNCGGVKDGMQIHGLVSRLGFEF-----------------VDAAYEVFERMPEKDLIS 222
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
WTAMI +++ G +G L D E+D +W+++ISG++ + + A + +M
Sbjct: 223 WTAMIRRFVTDGRMGKPVELFDTLKEKDDFVWTVLISGFVSNEEYEEALCWYVRMNREGC 282
Query: 176 -PN---------------------------------RDVMSWNTLLNGYANSGDVGSFEK 201
PN D+ N+L++ YA G+V K
Sbjct: 283 KPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYAKCGNVTDAYK 342
Query: 202 VFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+F ++ E NV S N +I G+ +NG +AL +K+M E + PN T +AVL AC+ G
Sbjct: 343 IFVDVVELNVVSNNSVINGFTQNGFGEEALNMYKRMQNE-SLEPNRVTFLAVLSACTHAG 401
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGN--ALIDMYAKCGVIESAVDVFNCL 308
++ G+ + +S Y+ + ++D+ + G+++ A D+ +
Sbjct: 402 LIEEGRNLFDTMKS-RYRNEPDADHYACMVDLLGRAGLLDEANDLIRSI 449
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 165/378 (43%), Gaps = 60/378 (15%)
Query: 91 TALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPE---- 146
TA++ +Y+ G + +A K+F +MPER + AMIS YI R LA E
Sbjct: 10 TAMLVVYAKNGQIINARKLFDKMPERTTATYNAMISGYILKA------RKFHLAEELYRE 63
Query: 147 -----RDVVMWSIVISGYIESGDMVSARELFDKM--PNRDVMSWNTLLNGYANSGDVGSF 199
RD V + +++GY++ G+ A +F+ + RDV+SW+ ++ G G +G
Sbjct: 64 VPCEFRDPVCSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGLCRDGRIGYA 123
Query: 200 EKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSR 259
K+F+ MPERNV SW+ +I GY G F + F +M EG V N T+ ++ C
Sbjct: 124 RKLFDRMPERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVNSTTMTIMIKGCGN 183
Query: 260 LGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
G + G +H +G++ +++A +VF + +D+ISW M
Sbjct: 184 CGGVKDGMQIHGLVSRLGFE-----------------FVDAAYEVFERMPEKDLISWTAM 226
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I G + LFD +K E+ D V V I GF+ + +
Sbjct: 227 IRRFVTDGRMGKPVELFDTLK---EKDDFVWTVLI-----------SGFVSNEEYEEALC 272
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVR------------KMPMEPDAVIWTSLLGACR 427
++ GC + L + +L + S V KM +E D I SL+
Sbjct: 273 WYVRMNREGCKPNPLTISSVLAASASLVALNEGLQIHSHVLKMNLEYDLSIQNSLISFYA 332
Query: 428 THKNVEIAELAFQHLIEL 445
NV A F ++EL
Sbjct: 333 KCGNVTDAYKIFVDVVEL 350
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 31/238 (13%)
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
M ++N+ +W ++ YA+NG+ +A + F +M N +++ L A
Sbjct: 1 MSQKNIVTWTAMLVVYAKNGQIINARKLFDKMPERTTATYN------AMISGYILKARKF 54
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--DRRDIISWNTMINGL 323
+Y E + NAL++ Y K G A+ VF + +RD++SW+ ++ GL
Sbjct: 55 HLAEELYREVPCEFRDPVCSNALMNGYLKIGETNEALRVFENVGESKRDVVSWSAVVVGL 114
Query: 324 AMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSM-----VDHY 378
G A LFD+M + + V++ ++ GL +GF +F M V+
Sbjct: 115 CRDGRIGYARKLFDRMP----ERNVVSWSAMIDGYMEKGLFENGFGFFLEMRREGVVEVN 170
Query: 379 SIIPQIEHYGC-----------MADLLGRAG--LLDQAVSFVRKMPMEPDAVIWTSLL 423
S I GC + L+ R G +D A +MP E D + WT+++
Sbjct: 171 STTMTIMIKGCGNCGGVKDGMQIHGLVSRLGFEFVDAAYEVFERMP-EKDLISWTAMI 227
>Medtr3g029530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:9292413-9288471 | 20130731
Length = 1125
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 261/547 (47%), Gaps = 18/547 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF MP + +WN+M + + ++L EM + A +N+ T + +C
Sbjct: 506 AELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKA-MNYVTFTTALSACY 564
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++ VH N + L+ MY G + +A KV MPER+VV W A
Sbjct: 565 NLEKLK---IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNA 621
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK-MP------ 176
+I + D + + +L ++ I I + G +S L MP
Sbjct: 622 LIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLL--GTCMSPDYLLKHGMPIHAHIV 679
Query: 177 ----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D ++L+ YA GD+ + +F+ + +N +WN + A G +AL+
Sbjct: 680 VAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALK 739
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
+M +G V + F+ L L LD G+ +H + +G++ + +V NA +DMY
Sbjct: 740 FIARMRNDG-VDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMY 798
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
KCG I+ + R SWN +I+ LA HG A F +M + +PD VTFV
Sbjct: 799 GKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFV 858
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
+LSAC+H GLV +G +YF SM + + IEH C+ DLLGR+G L +A F+ KMP+
Sbjct: 859 SLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPV 918
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
P+ +W SLL AC+ H N+E+ A L EL + + +V+ SN+ RW DV +
Sbjct: 919 PPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENV 978
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNL 532
+ M +K P CS I+ + V+ F D+ HP++ IY L L + R G++P+
Sbjct: 979 RKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDT 1038
Query: 533 VDVAQGT 539
Q T
Sbjct: 1039 SYALQDT 1045
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/441 (29%), Positives = 211/441 (47%), Gaps = 33/441 (7%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A+ VFDKM + N A+WN M +G+ + + F M P + + + +V +C
Sbjct: 200 YAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGVTP-SSYVIASMVTAC 258
Query: 63 SKAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
++G + EG Q+H K G N F+ T+L+ Y GSV +A K+F E+ E N+V W
Sbjct: 259 DRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSW 318
Query: 122 TAMISAYISCGDVGSGRRLLDLAPE-----------------RDVVMWSIVISGYIESGD 164
T+++ Y D G + +L++ R M+ GY GD
Sbjct: 319 TSLMVCY---ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGD 375
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
++ + + V N+L++ + N V +VF M ER+ SWN +I A N
Sbjct: 376 VIKS-----GLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHN 430
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
GRF ++L F M + T+ A+L AC L G+ +H G + N+ V
Sbjct: 431 GRFEESLGHFFWMR-RTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCV 489
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
N+L+ MYA+ G E A VF+ + RD+ISWN+M+ G + A+ L +M +R+
Sbjct: 490 CNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRK 549
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+ VTF LSAC ++ ++ + V H+++ + + + G+ GL+D+A
Sbjct: 550 AMNYVTFTTALSACYNLEKLK----IVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQ 605
Query: 405 SFVRKMPMEPDAVIWTSLLGA 425
+ MP E D V W +L+G
Sbjct: 606 KVCKIMP-ERDVVTWNALIGG 625
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 14/364 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+F+++ EPN +W ++ Y+ ++V+ ++ + R T+ V+R+C
Sbjct: 303 ANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHL-RHNGLICTGNTMATVIRTCG 361
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
G G Q+ K G +S + +LI M+ SV +A +VF M ER+ + W
Sbjct: 362 MFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWN 421
Query: 123 AMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN- 177
++I+A G +G + P+ D + S ++ + + R L +
Sbjct: 422 SIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKS 481
Query: 178 ---RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+V N+LL+ YA +G E VF MP R++ SWN ++ + +G++S A+
Sbjct: 482 GLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLL 541
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+ML + N T L AC L L K VH + N+ +GN L+ MY K
Sbjct: 542 VEMLKTRKAM-NYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHNLIIGNTLVTMYGK 597
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGI 354
G+++ A V + RD+++WN +I G A + + F+ M+ + +T V +
Sbjct: 598 FGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNL 657
Query: 355 LSAC 358
L C
Sbjct: 658 LGTC 661
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 160/365 (43%), Gaps = 13/365 (3%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G+ +H + K + N+F L+ MYS GS+ A VF +M +RN W MIS ++
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVS-ARELFDKMPNRDVMS--- 182
G + E V S VI+ + SG M AR++ + +MS
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 183 -WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
+LL+ Y G V K+FEE+ E N+ SW L+ YA NG + L ++ + G
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345
Query: 242 DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY-KGNMFVGNALIDMYAKCGVIES 300
+ + T+ V+ C G MG + G ++ V N+LI M+ +E
Sbjct: 346 LICTGN-TMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEE 404
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VFN + RD ISWN++I A +G ++L F M+ + + D +T +L AC
Sbjct: 405 ASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGS 464
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWT 420
++ G ++ + + + + +AG + A MP D + W
Sbjct: 465 AQHLKWG-RGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPAR-DLISWN 522
Query: 421 SLLGA 425
S++ +
Sbjct: 523 SMMAS 527
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 148/342 (43%), Gaps = 19/342 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+KV MPE + TWNA+ G++ + + F M R N+ T+ ++
Sbjct: 601 MDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLS-NYITIVNLLG 659
Query: 61 SC-SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+C S ++ G +H GF+ ++++ ++LI MY+ G + + +F + +N
Sbjct: 660 TCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDLNTSSYIFDVLANKNSS 719
Query: 120 VWTAMISAYISCGDVGSG----RRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
W A+ SA G R+ + + D +S+ ++ + ++L +
Sbjct: 720 TWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWI 779
Query: 176 PN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
D N ++ Y G++ ++ R+ SWN+LI AR+G F A
Sbjct: 780 IKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQAT 839
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALID 290
EAF +ML G + P+ T V++L ACS G +D G + G + +ID
Sbjct: 840 EAFHEMLDLG-LKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIID 898
Query: 291 MYAKCGVIESAVDVFNCLDRRDI----ISWNTMINGLAMHGN 328
+ + G + A +D+ + W +++ +HGN
Sbjct: 899 LLGRSGRLAEAEGF---IDKMPVPPNEFVWRSLLAACKVHGN 937
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 1/166 (0%)
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
S + ++GK +H + N F N L++MY+K G I+ A VF+ + R+ SWN
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWN 217
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
MI+G G A+ F M + P +++AC G + +G V
Sbjct: 218 NMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVK 277
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
++ + + G G + +A ++ EP+ V WTSL+
Sbjct: 278 CGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322
>Medtr3g012530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr3:3530268-3532784 | 20130731
Length = 696
Score = 266 bits (681), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/491 (30%), Positives = 251/491 (51%), Gaps = 23/491 (4%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T ++ +C + ++ ++V GF+ + ++ ++ M+ + DA F +M
Sbjct: 125 TYDALISACIRLRSIIGVKRVFNYMKNSGFELDLYMMNRVLFMHVQCNLMRDARTWFDDM 184
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIES-GDMVSARELF 172
PER+ W MI + + L + MW +G + MV A
Sbjct: 185 PERDSSSWMTMIGGLVDSRNYSEAFELF-------LCMWEEFNNGKSRTFAAMVRASARL 237
Query: 173 D--------------KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
D + N D L++ Y+ G++ VF++MP++ WN +I
Sbjct: 238 DCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQKTTVGWNTII 297
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
GYA G +AL + +M G + + FT+ V+ C+RL +L+ GK H G+
Sbjct: 298 AGYAFRGFSEEALGIYYKMRDSGTKI-DHFTISIVITICARLASLEHGKQGHAALVRRGF 356
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
++ +AL++ Y+K G +E+A VF+ + R++IISWN +I G HG +A+ +F++
Sbjct: 357 GTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEK 416
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M P+ VTF+ +LSAC++ GL G+ FQSM ++I P+ HY CM +LLGR G
Sbjct: 417 MLQENMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACMIELLGREG 476
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSN 458
LLD+AV+ +R P P +W +LL ACR HKN+E+ + A + L +EP+ N+VML N
Sbjct: 477 LLDEAVALIRNAPFPPTLNMWAALLIACRMHKNLELGKFAAEKLYGMEPEKLCNYVMLLN 536
Query: 459 IYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRG 518
IY G+ ++ A + ++ G R LP + IE N F D+ H +T+ IY+ +
Sbjct: 537 IYNSSGKLKEAADVLQTLKRKGLRMLPAYTWIEVNKQPHAFLCGDKSHKQTKKIYKKVDS 596
Query: 519 LTMLLRLHGYV 529
L + + HGYV
Sbjct: 597 LMVEISRHGYV 607
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 165/343 (48%), Gaps = 22/343 (6%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLF----AEMNRAAAAPLNHFTLP 56
M AR FD MPE ++++W M G + ++ + LF E N + T
Sbjct: 174 MRDARTWFDDMPERDSSSWMTMIGGLVDSRNYSEAFELFLCMWEEFNNGKSR-----TFA 228
Query: 57 IVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPER 116
+VR+ ++ + G Q+H KR + F+ ALI+MYS G++ DA VF +MP++
Sbjct: 229 AMVRASARLDCIEVGRQIHTCILKRAVNGDPFVDCALIDMYSKCGNIEDARCVFDQMPQK 288
Query: 117 NVVVWTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVS 167
V W +I+ Y G +G ++ D + D SIVI+ +E G
Sbjct: 289 TTVGWNTIIAGYAFRGFSEEALGIYYKMRDSGTKIDHFTISIVITICARLASLEHGKQGH 348
Query: 168 ARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
A L + D+++ + L+N Y+ G + + VF++M +N+ SWN LI GY +GR
Sbjct: 349 A-ALVRRGFGTDLVANSALVNFYSKWGRMENARHVFDKMHRKNIISWNALIAGYGHHGRG 407
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+A+E F++ML E ++ PN T +AVL ACS G + G + ++ K
Sbjct: 408 EEAIEMFEKMLQE-NMTPNHVTFLAVLSACSYSGLSERGWEIFQSMSQDHNIKPRAMHYA 466
Query: 287 ALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGN 328
+I++ + G+++ AV + N + W ++ MH N
Sbjct: 467 CMIELLGREGLLDEAVALIRNAPFPPTLNMWAALLIACRMHKN 509
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +AR VFDKM N +WNA+ GY + + +F +M + P NH T V+
Sbjct: 376 MENARHVFDKMHRKNIISWNALIAGYGHHGRGEEAIEMFEKMLQENMTP-NHVTFLAVLS 434
Query: 61 SCSKAGAVREG-EQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNV 118
+CS +G G E ++ K + +IE+ +G + +A + P +
Sbjct: 435 ACSYSGLSERGWEIFQSMSQDHNIKPRAMHYACMIELLGREGLLDEAVALIRNAPFPPTL 494
Query: 119 VVWTAMISAYISCGDVGSGR----RLLDLAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+W A++ A ++ G+ +L + PE+ + + ++++ Y SG + A ++
Sbjct: 495 NMWAALLIACRMHKNLELGKFAAEKLYGMEPEK-LCNYVMLLNIYNSSGKLKEAADVLQT 553
Query: 175 MPNR 178
+ +
Sbjct: 554 LKRK 557
>Medtr2g009760.1 | PPR containing plant-like protein | HC |
chr2:2078277-2080236 | 20130731
Length = 622
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 260/507 (51%), Gaps = 26/507 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR+VFD MP +T TWN+M N Y + + + + P L +V C
Sbjct: 120 ARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPEL-LASMVSMCG 178
Query: 64 KAGAV--REGEQVHCVAAKRG---FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ + R G Q+H + G + + FL TA ++ Y G A VF EM +N
Sbjct: 179 REMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNE 238
Query: 119 VVWTAMISAYISCGDVGSG------RRLLDLAPERDVVMWSIVIS----GYIESGDMVSA 168
V WTA+IS + D ++ ++P R V + +++ + G+++ G +
Sbjct: 239 VSWTAVISGCANNQDYDVALACYREMQVEGVSPNR-VTLIALLAACARPGFVKYGKEIHG 297
Query: 169 ---RELFDKMPNRDVMSWNTLLNGYANSGDVGSF-EKVFEEMPERNVYSWNVLIGGYARN 224
R FD + L+ Y G E++FE R+V W+ +IG YAR
Sbjct: 298 YAFRRGFDSCHSFS----PALIYLYCECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARR 353
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G AL+ F +M E + PN TL+AV+ AC+ L + G +H Y G ++FV
Sbjct: 354 GESDKALKLFNKMRTE-ETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFV 412
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE 344
NALI+MYAKCG ++ + +F + RD ++WN+MI+ +HG AL F +MK
Sbjct: 413 CNALINMYAKCGSLDDSRKIFLEMPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGV 472
Query: 345 QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAV 404
+ D VTF+ +LSAC H GLV +G F+ + I IEHY C+ DL GR+G L+ A+
Sbjct: 473 KLDAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDAL 532
Query: 405 SFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+R MPM+P A IW+SL+ +C+ H ++IAE LI EP N A++ +LS I+ + G
Sbjct: 533 EILRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKG 592
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIE 491
RW D+ +++ M+ RK G S IE
Sbjct: 593 RWLDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/441 (26%), Positives = 196/441 (44%), Gaps = 82/441 (18%)
Query: 53 FTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
F LP V+++CS G Q+HC+A G + + ++I MY+ + A +VF
Sbjct: 67 FVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDT 126
Query: 113 MPERNVVVWTAMISAYIS--------------------------------CG---DVG-- 135
MP R+ + W +MI+AY+ CG D+G
Sbjct: 127 MPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWR 186
Query: 136 SGRRLLDLAP-------ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLN 188
GR++ L + V + + + Y GD + AR +FD+M ++ +SW +++
Sbjct: 187 IGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVIS 246
Query: 189 GYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
G AN+ D + AL +++M VEG V PN
Sbjct: 247 GCANNQD-------------------------------YDVALACYREMQVEG-VSPNRV 274
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG-VIESAVDVFNC 307
TL+A+L AC+R G + GK +H YA G+ ALI +Y +CG + A +F
Sbjct: 275 TLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAERIFEG 334
Query: 308 LDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
RD++ W+++I A G + AL LF++M+ +P+ VT + ++SACT++ + G
Sbjct: 335 SSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHG 394
Query: 368 FLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACR 427
+ + + I I + ++ + G LD + +MP D+V W S++ A
Sbjct: 395 GV-IHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSR-DSVTWNSMISAYG 452
Query: 428 THKNVEIAELAFQHLIELEPK 448
H E A QH E++ +
Sbjct: 453 LHG---YGEQALQHFYEMKER 470
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 106/256 (41%), Gaps = 43/256 (16%)
Query: 225 GRFSDALEAFKQMLVEG---DVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN 281
G + L+ F Q+ + +P F L +V+ ACS G +H A G +
Sbjct: 43 GLYHQTLQFFTQLHFSAHHFNSIP--FVLPSVIKACSFTHFHAFGTQLHCLAFITGSYTD 100
Query: 282 MFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
V N++I MYAK IESA VF+ + RD I+WN+MIN +G +AL +
Sbjct: 101 PIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYF 160
Query: 342 SREQPDGVTFVGILSAC-------------THMGLVRDGFLYFQ-------SMVDHYSII 381
P ++S C H +V DG + Q + VD Y
Sbjct: 161 LGFLPKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFY--- 217
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
+ C L+ R+ + V + V WT+++ C +++ ++A LA
Sbjct: 218 -----FRCGDSLMARSVFDEMEVK---------NEVSWTAVISGCANNQDYDVA-LACYR 262
Query: 442 LIELEPKNPANFVMLS 457
+++E +P +++
Sbjct: 263 EMQVEGVSPNRVTLIA 278
>Medtr5g067140.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:28350546-28353833 | 20130731
Length = 770
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 284/552 (51%), Gaps = 28/552 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A++VFD M N W + GY + + LF EM + +++TL I +
Sbjct: 129 MECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALN 188
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYS-AKGSVGDAYKVFGEMPERNVV 119
+C+ +++ GEQ+H K +++ + AL +Y+ G + F + E++V+
Sbjct: 189 ACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRRIKEKDVI 248
Query: 120 VWTAMISAYISCGDVGSGRR--------LLD---LAPERDVVMWSIVISGYIESGDM-VS 167
WTA ISA CG+ G + LLD + P + ++ ++ ++ +
Sbjct: 249 SWTAAISA---CGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQ 305
Query: 168 ARELFDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
L K+ ++ N+LL Y G + +++F+ M + N+ +WN +I G+A+
Sbjct: 306 VHALCTKLGYESNLRVRNSLLYLYLKCGCIVEAQRLFKGMNDVNLVTWNAMIAGHAQMME 365
Query: 227 FS-DALEAFKQ---------MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI 276
S D L A+++ L + P+ FT +VL CS++ AL+ G+ +H
Sbjct: 366 LSKDNLSAYQKGIEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKT 425
Query: 277 GYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLF 336
G+ ++ VG+++I+MY KCG IE A VF + R +I W TMI G A HG + AL+LF
Sbjct: 426 GFLSDVVVGSSMINMYNKCGSIERASKVFLEMSIRTMILWTTMITGFAQHGWSKQALNLF 485
Query: 337 DQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGR 396
+ MK +P+ VTFVG+LSAC G+V + F YF+ M Y I P ++HY C+ D+L R
Sbjct: 486 EDMKLVGIRPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVR 545
Query: 397 AGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVML 456
G + +A ++KM + IW++L+ C + N+E+ A + L+ L+PK+ + +L
Sbjct: 546 LGQVQEAFDLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLL 605
Query: 457 SNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRAL 516
N Y GR+ DV+R++ MR+ +L S I D V F + D+ E+ SI ++L
Sbjct: 606 LNAYVSAGRYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIES-SIGKSL 664
Query: 517 RGLTMLLRLHGY 528
L + + GY
Sbjct: 665 EDLHIKAKNLGY 676
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 3/186 (1%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L+ YA G + ++VF+ M RN +W L+ GY +N A+ F++ML+ + P
Sbjct: 119 LVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYP 178
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC-GVIESAVDV 304
+++TL L AC+ L +L +G+ +H Y + +GNAL +Y KC G +E +
Sbjct: 179 SNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTA 238
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVGILSACTHMG 362
F + +D+ISW I+ G + +F +M + QP+ T LS C +
Sbjct: 239 FRRIKEKDVISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVK 298
Query: 363 LVRDGF 368
+ G
Sbjct: 299 CLELGI 304
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 8/206 (3%)
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
RN +F +A K+ E D L L CS + +H + G +
Sbjct: 58 RNLKFQEAFSLAKESNEEVDSSFYPPLLQQCLENCS----FSSTQIIHCHIVKTGSHEDP 113
Query: 283 FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM-KN 341
F+ + L+ +YAKCG +E A VF+ ++RR+ ++W ++ G + A+ LF++M +
Sbjct: 114 FLSSFLVTVYAKCGRMECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLH 173
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA-GLL 400
S P T L+ACT + ++ G + + Y + + L + G L
Sbjct: 174 SECYPSNYTLAIALNACTSLHSLKLG-EQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKL 232
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ ++ R++ E D + WT+ + AC
Sbjct: 233 EVGLTAFRRIK-EKDVISWTAAISAC 257
>Medtr4g068900.1 | PPR containing plant-like protein | HC |
chr4:25858642-25860684 | 20130731
Length = 680
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/623 (28%), Positives = 289/623 (46%), Gaps = 108/623 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGY----SLTESH--------RDVVV-------------- 37
A K+FD++P PN +WNA+ Y +LT++ RD+V
Sbjct: 46 AHKLFDEIPHPNAYSWNALIMAYIKAQNLTQARAVFDSAVDRDLVSYNSMLSAYVGADGY 105
Query: 38 ------LFAEMNRAA-AAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLC 90
LF +M A ++ F+L +V +K V G+Q+H K + F
Sbjct: 106 ETEAVDLFDKMQSARDMIGIDEFSLTTMVNFSAKLRLVCYGKQMHSYMVKTASDLSKFAS 165
Query: 91 TALIEMYSAKGSVGDAYKVF----------------------GEMPE-----------RN 117
++LI MYS G DA V GEM +
Sbjct: 166 SSLINMYSKCGLFRDACSVVSGFDGVVDLVSKNAMVAACCREGEMDMALNVFWKNHELND 225
Query: 118 VVVWTAMISAYISCG----------------------------DVGSGRRLLDLAP---- 145
V W +I+ Y G V SG + L L
Sbjct: 226 TVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLKHLKLGKCVHA 285
Query: 146 -------ERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGS 198
+ + S ++ Y + G++ A ++ + + + ++L+ GY++ G++
Sbjct: 286 WVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQFAVSSLIVGYSSQGEMMK 345
Query: 199 FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
+++F+ + ERN W L GYA++ + + + F++ + +++P+ ++ VL AC+
Sbjct: 346 AQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTREELIPDAMIIIRVLGACA 405
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL-DR-RDIISW 316
L +GK +H Y + K + + +A++DMY+KCG I A F + DR RD+I +
Sbjct: 406 TQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYAEKSFQLMTDRDRDVILY 465
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N MI G A HG A+ LF M +PD VTFV +LSAC H GLV G ++F SM D
Sbjct: 466 NVMIAGYAHHGFENKAIQLFHDMLKKNVKPDAVTFVALLSACRHRGLVEQGEIFFISMED 525
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
YS++P+I HY CM D+ GRA L++A+ F+RK+P++ DA IW + L AC+ + N +
Sbjct: 526 -YSVLPEINHYACMVDMYGRANQLEKALEFMRKIPIQIDATIWGAFLNACQINNNTSLVN 584
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
A + L+++ + V L+N+Y G W ++ R++ MR +KL GCS I + +
Sbjct: 585 KAEEELLKIGADTGSRCVQLANVYASEGNWNEMGRIRKKMRVKEAKKLTGCSWIYVENGI 644
Query: 497 VEFYSLDERHPETESIYRALRGL 519
F S D H + ++IY L L
Sbjct: 645 HAFTSGDTSHAKADAIYSTLLCL 667
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 162/374 (43%), Gaps = 46/374 (12%)
Query: 1 MGHARKVFDKMPEPN-TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
M A VF K E N T +WN + GY+ + LF +M H TL V+
Sbjct: 210 MDMALNVFWKNHELNDTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEH-TLASVL 268
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
CS ++ G+ VH K + N F+ + ++++Y G++ A V+ + ++
Sbjct: 269 SVCSGLKHLKLGKCVHAWVLKNDYNSNQFISSGIVDLYCKCGNIRYAELVYAGIGIKSQF 328
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR- 178
+++I Y S G++ +RL D ER+ V+W+ + SGY +S +LF K R
Sbjct: 329 AVSSLIVGYSSQGEMMKAQRLFDSLLERNSVVWTALCSGYAKSQQCEEVFKLFRKFVTRE 388
Query: 179 ---------------------------------------DVMSWNTLLNGYANSGDVGSF 199
D + +++ Y+ G++
Sbjct: 389 ELIPDAMIIIRVLGACATQATLSLGKQIHTYILRMRLKMDKKLLSAMVDMYSKCGNIMYA 448
Query: 200 EKVFEEMP--ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
EK F+ M +R+V +NV+I GYA +G + A++ F ML + +V P+ T VA+L AC
Sbjct: 449 EKSFQLMTDRDRDVILYNVMIAGYAHHGFENKAIQLFHDML-KKNVKPDAVTFVALLSAC 507
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISW 316
G ++ G+ + E + ++DMY + +E A++ + + D W
Sbjct: 508 RHRGLVEQGEIFFISMEDYSVLPEINHYACMVDMYGRANQLEKALEFMRKIPIQIDATIW 567
Query: 317 NTMINGLAMHGNTA 330
+N ++ NT+
Sbjct: 568 GAFLNACQINNNTS 581
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H A K GF + F C LI +YS G + DA+K+F E+P N W A+I AYI ++
Sbjct: 15 HVQAIKSGFTSSIFTCNQLIHLYSKHGLLKDAHKLFDEIPHPNAYSWNALIMAYIKAQNL 74
Query: 135 GSGRRLLDLAPERDVVMWSIVISGYI-ESGDMVSARELFDKMPN-RDVM-----SWNTLL 187
R + D A +RD+V ++ ++S Y+ G A +LFDKM + RD++ S T++
Sbjct: 75 TQARAVFDSAVDRDLVSYNSMLSAYVGADGYETEAVDLFDKMQSARDMIGIDEFSLTTMV 134
Query: 188 NGYANSGDVGSFEKVFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-D 242
N A V +++ M + + ++ + LI Y++ G F DA +V G D
Sbjct: 135 NFSAKLRLVCYGKQMHSYMVKTASDLSKFASSSLINMYSKCGLFRDACS-----VVSGFD 189
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V + + A++ AC R G +DM N+F N ++
Sbjct: 190 GVVDLVSKNAMVAACCREGEMDMAL-------------NVFWKNHELN------------ 224
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
D +SWNT+I G A +G AL+LF +M + D T +LS C+ +
Sbjct: 225 ---------DTVSWNTLIAGYAQNGYMDKALALFVKMTERGVRFDEHTLASVLSVCSGLK 275
Query: 363 LVRDG 367
++ G
Sbjct: 276 HLKLG 280
>Medtr5g027980.1 | pentatricopeptide (PPR) repeat protein | HC |
chr5:11695650-11697815 | 20130731
Length = 446
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 131/357 (36%), Positives = 208/357 (58%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
DV+ N+L+N Y G++ + VF M E++V SW+ +IG +A +++ L +M
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMS 65
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
EG + TLV VL AC+ LG+ D+GK +H + N+ V +LIDMY K G +
Sbjct: 66 SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCL 125
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E + VF + ++ S+ MI+GLA+HG +AL +F +M PD V +VG+ SAC
Sbjct: 126 EKGLRVFKNMSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFSAC 185
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVI 418
+H GLV +G F+SM + I P ++HYGCM DLLGR G+L +A ++ M ++P+ VI
Sbjct: 186 SHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPNDVI 245
Query: 419 WTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRD 478
W SLL AC+ H N+EI ++A ++L L N ++++L+N+Y +W DVA+++ + +
Sbjct: 246 WRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKLAE 305
Query: 479 TGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
+ PG S+IE V +F S D+ P+ IY + + L+ GY+P+ V
Sbjct: 306 RNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLKFEGYIPDTSQV 362
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 43/323 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A VF+ M E + A+W+A+ ++ E + ++L +M+ + TL V+
Sbjct: 23 IKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMSSEGRCRVEESTLVNVLS 82
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G+ G+ +H + + + N + T+LI+MY G + +VF M E+N
Sbjct: 83 ACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCLEKGLRVFKNMSEKNRYS 142
Query: 121 WTAMISAYISCGDVGSGRRLLD------LAPERDVVMWSIVISGYIESGDMVSARELFDK 174
+T MIS G ++ LAP D V++ V S +G + + F
Sbjct: 143 YTVMISGLAIHGRGKEALKVFSEMIEEGLAP--DDVVYVGVFSACSHAGLVEEGLQCFKS 200
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
M FE E V + ++ R G +A E
Sbjct: 201 MQ--------------------------FEHKIEPTVQHYGCMVDLLGRFGMLKEAYELI 234
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI--DMY 292
K M ++ PND ++L AC L++GK + AE++ G+ L+ +MY
Sbjct: 235 KSMSIK----PNDVIWRSLLSACKVHHNLEIGK---IAAENLFMLNQNNSGDYLVLANMY 287
Query: 293 AKCGVIESAVDVFNCLDRRDIIS 315
AK + + L R+++
Sbjct: 288 AKAQKWDDVAKIRTKLAERNLVQ 310
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 3/170 (1%)
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
+G +G++ V N+LI+MY KCG I++A DVFN +D + + SW+ +I A + L L
Sbjct: 1 MGLEGDVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLML 60
Query: 336 FDQMKNS-REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLL 394
+M + R + + T V +LSACTH+G G ++ + S + + + D+
Sbjct: 61 LGKMSSEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTS-LIDMY 119
Query: 395 GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
++G L++ + + M E + +T ++ H + A F +IE
Sbjct: 120 VKSGCLEKGLRVFKNMS-EKNRYSYTVMISGLAIHGRGKEALKVFSEMIE 168
>Medtr4g023510.1 | PPR containing plant-like protein | HC |
chr4:7953334-7955464 | 20130731
Length = 494
Score = 262 bits (670), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 156/494 (31%), Positives = 253/494 (51%), Gaps = 72/494 (14%)
Query: 7 VFDKMPEPNTAT----WNAMFNGYSLTESHRDVVVLFAEM--NRAAAAPLNHFTLPIVVR 60
+F P N T +N + YSL+ + + F N + L+ FTL +
Sbjct: 63 LFHHYPFHNNLTSLLLFNNLIRSYSLSLFPHESLKFFTHTLNNLTHSLSLDSFTLTFLAH 122
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C+ G +HC+ K GF E +V V
Sbjct: 123 ACANLDTTHFGFHLHCIVCKMGF-------------------------------ENHVFV 151
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV 180
T ++ Y + W G +V A ++F +MP+R+
Sbjct: 152 QTGLLHMYSN---------------------W----------GFLVDAAQVFGEMPDRNT 180
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
++WN ++G G + VF+ M R+V SW ++I GY R + AL F++M+
Sbjct: 181 VTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEV 240
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKG-NMFVGNALIDMYAKCGVIE 299
+ PN+ TL+ V A + LG + M + VH Y E G+ ++ + NALID+YAKCG IE
Sbjct: 241 DGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIE 300
Query: 300 SAVDVFNCLD--RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
SA +F+ + RR+ +SWN++++G A G +A+ F++M+ + +P+ V F+ ILSA
Sbjct: 301 SASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSA 360
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME-PDA 416
C+H GLV +G +F MV+ Y ++P I+HYGC+ D+LGRAG L +A ++P E +
Sbjct: 361 CSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAAND 420
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
VIW +LLGAC H NVEI + + ++E+E + ++V++SNI+ +GR++DV RL+ +
Sbjct: 421 VIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRFKDVERLREMI 480
Query: 477 RDTGFRKLPGCSVI 490
KLPG S++
Sbjct: 481 DKRNVFKLPGYSIV 494
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 14/231 (6%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR VFD+M + +W + +GY+ + LF +M N TL V + +
Sbjct: 199 ARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALALFRKMIEVDGIEPNEVTLLTVFPAIA 258
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPE--RNVVV 120
G V+ E VH KRGF + ALI++Y+ G + A +F EMP+ RN V
Sbjct: 259 HLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIESASGLFSEMPDWRRNSVS 318
Query: 121 WTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W +++S Y + G V + ++ + V + ++S SG + E F KM
Sbjct: 319 WNSVMSGYATFGMVREAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMV 378
Query: 177 NR-----DVMSWNTLLNGYANSGDVGSFEKVFEEMPER--NVYSWNVLIGG 220
N D+ + +++ +G +G EKV E+P N W L+G
Sbjct: 379 NDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGA 429
>Medtr2g016780.1 | editing factor, putative | HC |
chr2:5197710-5195940 | 20130731
Length = 551
Score = 262 bits (670), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 154/498 (30%), Positives = 250/498 (50%), Gaps = 45/498 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F + +PN +N M G + + D + + + R N FT IV+++C
Sbjct: 69 ATLLFHNIHKPNVFAFNWMILGM-VYNGYFDNALFYFRLMRDIGLIGNKFTFGIVIKTCV 127
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+++G+QVH + + G + + LI+MY
Sbjct: 128 GLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYG------------------------- 162
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------PN 177
CG V R+ D ERDV W+ +I G+ +G + A LF++M PN
Sbjct: 163 ------KCGSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPN 216
Query: 178 RDVMSWNTLLNGYANSGD----VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+WN ++ YA GD G E++ +E +V +WN LI G+A+N +F +
Sbjct: 217 D--FTWNAIIATYARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTV 274
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F++MLV G + PN T+ A+L AC +G++ G+ VH + G+ N+F+ +ALIDMY+
Sbjct: 275 FREMLVSG-ICPNQVTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYS 333
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG ++ A +VF+ + +++ SWN MI+ G AL LF +MK QP+ VTF
Sbjct: 334 KCGSLKDARNVFDKIQCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFAC 393
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
ILSAC+H G V G F M + Y + EHY C+ DLL R+G + +A F++ MP++
Sbjct: 394 ILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLCRSGKIVEAYEFIKAMPIQ 453
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
I + L C+ H ++A+ + ++ ++ +FV LSNIY G W++ ++
Sbjct: 454 VTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVTLSNIYAAEGDWEEAGNVR 513
Query: 474 IAMRDTGFRKLPGCSVIE 491
M++ K PG S +E
Sbjct: 514 KVMKERNVNKWPGSSWLE 531
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 132/261 (50%), Gaps = 6/261 (2%)
Query: 177 NRDVMSWNTLLNG-YANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFK 235
N +++S ++ L G Y++ D+ S +F + + NV+++N +I G NG F +AL F+
Sbjct: 46 NTNILSLSSKLVGMYSSCTDLKSATLLFHNIHKPNVFAFNWMILGMVYNGYFDNALFYFR 105
Query: 236 QMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M G ++ N FT V+ C L + GK VH +G ++ +GN LIDMY KC
Sbjct: 106 LMRDIG-LIGNKFTFGIVIKTCVGLMDMKKGKQVHGMICEMGLMNDVLIGNGLIDMYGKC 164
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G ++ A VF+ + RD+ SW +MI G G +AL LF++MK +P+ T+ I+
Sbjct: 165 GSVDYACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEPNDFTWNAII 224
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME-- 413
+ +G + F + + M IP + + + + + + R+M +
Sbjct: 225 ATYARLGDSKKAFGFMERM-QKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGI 283
Query: 414 -PDAVIWTSLLGACRTHKNVE 433
P+ V +LL AC + +V+
Sbjct: 284 CPNQVTIAALLPACGSVGSVK 304
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 12/187 (6%)
Query: 1 MGHARKVFDKMPE-------PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHF 53
+G ++K F M P+ WNA+ +G++ R+ +F EM + P N
Sbjct: 230 LGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICP-NQV 288
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEM 113
T+ ++ +C G+V+ G +VH ++GF N F+ +ALI+MYS GS+ DA VF ++
Sbjct: 289 TIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDKI 348
Query: 114 PERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSAR 169
+NV W AMI + CG V S L E + V ++ ++S SG +
Sbjct: 349 QCKNVASWNAMIDCFGKCGMVDSALELFTKMKEEGLQPNEVTFACILSACSHSGSVEKGL 408
Query: 170 ELFDKMP 176
E+F M
Sbjct: 409 EIFTLMK 415
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 153/367 (41%), Gaps = 45/367 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +VFD M E + A+W +M G+ T + +VLF M P N FT ++ +
Sbjct: 169 YACRVFDGMSERDVASWTSMICGFCNTGRIEEALVLFERMKMEGYEP-NDFTWNAIIATY 227
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
++ G ++ K GF + ALI ++ + + VF EM +
Sbjct: 228 ARLGDSKKAFGFMERMQKEGFIPDVVAWNALISGFAQNHQFRETFTVFREMLVSGICPNQ 287
Query: 123 AMISAYI-SCGDVGS---GRRLLDLAPER----DVVMWSIVISGYIESGDMVSARELFDK 174
I+A + +CG VGS GR + + +V + S +I Y + G + AR +FDK
Sbjct: 288 VTIAALLPACGSVGSVKWGREVHGFICRKGFDANVFIASALIDMYSKCGSLKDARNVFDK 347
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ ++V SWN +++ + G V S ALE F
Sbjct: 348 IQCKNVASWNAMIDCFGKCGMVDS-------------------------------ALELF 376
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVH-VYAESIGYKGNMFVGNALIDMYA 293
+M EG + PN+ T +L ACS G+++ G + + E G + ++D+
Sbjct: 377 TKMKEEG-LQPNEVTFACILSACSHSGSVEKGLEIFTLMKECYGVEICKEHYACIVDLLC 435
Query: 294 KCGVIESAVDVFNCLDRRDIISW-NTMINGLAMHGNTADALSLFDQMKNSREQPDG--VT 350
+ G I A + + + S +NG +HG A + +++ + G VT
Sbjct: 436 RSGKIVEAYEFIKAMPIQVTESIAGAFLNGCKIHGRKDLAKKMAEEIMRMQLNGSGSFVT 495
Query: 351 FVGILSA 357
I +A
Sbjct: 496 LSNIYAA 502
>Medtr7g092100.1 | RNAediting factor 1 | HC | chr7:36467361-36465331
| 20130731
Length = 596
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 158/475 (33%), Positives = 246/475 (51%), Gaps = 11/475 (2%)
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMIS 126
++ +G Q+H K G + L LI YS + ++F + P ++ W+++IS
Sbjct: 35 SLPKGLQLHAHIIKLGLQTIPLLSHHLINFYSKTHLPYSSLQIFHDSPHKSATTWSSVIS 94
Query: 127 AY----ISCGDVGSGRRLL--DLAPERDVVMWSIVISGYIESGDMVSARELF--DKMPNR 178
++ + + R +L + P+ + + G + S + F +
Sbjct: 95 SFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHL 154
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ +++++ YA GD+ VF+EMP RNV SW+ LI GY + G ++L FK+ L
Sbjct: 155 DIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFL 214
Query: 239 VEGDVVP-NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGV 297
VE + NDFTL +VL C L MG+ +H + + + FV ++LI +Y+KCGV
Sbjct: 215 VEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGV 274
Query: 298 IESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPDGVTFVGILS 356
+E A DVF + R++ WN M+ A H +T LFD+MK+ + + +TF+ +L
Sbjct: 275 VEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELFDKMKSVGGMKANFITFLCVLY 334
Query: 357 ACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDA 416
AC+H GLV G YF+ M D Y I P +HY M DLLGRAG L+ AV + +MPMEP
Sbjct: 335 ACSHAGLVEKGKYYFELMKD-YGIEPGTQHYSTMVDLLGRAGKLNDAVKLIEEMPMEPTE 393
Query: 417 VIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM 476
+W +LL CR H N ++A + EL + VMLSN Y GRW++ A+ + M
Sbjct: 394 SVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYAAAGRWEEAAKARKMM 453
Query: 477 RDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
RD G +K G S +E + + F + D H ++ IY L L + GYV +
Sbjct: 454 RDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGEEMDKAGYVAD 508
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 157/346 (45%), Gaps = 14/346 (4%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
++F P + TW+++ + ++ + + F M R P +H P +SC
Sbjct: 76 QIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHI-FPSATKSCGIL 134
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMI 125
++ + +HC A K + + F+ +++I+MY+ G + A+ VF EMP RNVV W+ +I
Sbjct: 135 SSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDEMPYRNVVSWSGLI 194
Query: 126 SAYISCGDVGSGRRLLD--LAPER-----DVVMWSIVI----SGYIESGDMVSARELFDK 174
Y+ G+ RL L E D + S++ S ++ G ++ F
Sbjct: 195 YGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLS-FKT 253
Query: 175 MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAF 234
+ ++L++ Y+ G V VFEE+ RN+ WN ++ A++ E F
Sbjct: 254 SFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMWNAMLIACAQHAHTDKTFELF 313
Query: 235 KQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAK 294
+M G + N T + VL ACS G ++ GK+ + G + + ++D+ +
Sbjct: 314 DKMKSVGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGR 373
Query: 295 CGVIESAVDVFNCLDRRDIIS-WNTMINGLAMHGNTADALSLFDQM 339
G + AV + + S W ++ G +HGNT A + D++
Sbjct: 374 AGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRV 419
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 155/372 (41%), Gaps = 59/372 (15%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGY-SLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A VFD+MP N +W+ + GY L E + + + +N FTL V+R
Sbjct: 174 YAHNVFDEMPYRNVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGVNDFTLSSVLRV 233
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
C + ++ G +H ++ K F + F+ ++LI +YS G V +AY VF E+ RN+ +W
Sbjct: 234 CGGSTLLQMGRLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVRNLGMW 293
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVM 181
AM+ I+C + ELFDKM + M
Sbjct: 294 NAML---IACAQHAHTDKTF----------------------------ELFDKMKSVGGM 322
Query: 182 SWN-----TLLNGYANSGDVGSFEKVFEEMP----ERNVYSWNVLIGGYARNGRFSDALE 232
N +L +++G V + FE M E ++ ++ R G+ +DA++
Sbjct: 323 KANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLNDAVK 382
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG--NALID 290
++M +E P + A+L C G + +V A+ + G++ G L +
Sbjct: 383 LIEEMPME----PTESVWGALLTGCRLHGNTKLASYV---ADRVSELGSVSSGLHVMLSN 435
Query: 291 MYAKCGVIESAVDVFNCLDRRDI-----ISW----NTMINGLAMHGNTADALSLFDQMKN 341
YA G E A + R I +SW N + A + A ++ ++D++
Sbjct: 436 AYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDE 495
Query: 342 SREQPDGVTFVG 353
E+ D +V
Sbjct: 496 LGEEMDKAGYVA 507
>Medtr1g041310.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:15372357-15367000 | 20130731
Length = 686
Score = 260 bits (664), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 249/499 (49%), Gaps = 14/499 (2%)
Query: 1 MGHARKVFDKMPE---PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPI 57
+G A VF KM +WNA+ GY + LF M P + TL
Sbjct: 187 VGLAASVFAKMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCRNVLP-DLLTLAN 245
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
+ C + +R G +H G + + TAL+++Y K + A K+F + ++
Sbjct: 246 AIFCCVELNYLRRGMSIHGYMITMGVELDLVASTALVDLY-CKIDITKARKLFERLGNKD 304
Query: 118 VVVWTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL-- 171
VV+ M++ Y+ G V R ++ +V ++ +IS + D+ R +
Sbjct: 305 AVVYNVMMTGYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHG 364
Query: 172 --FDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
M V N +++ YA G V +VF M R++ SW +I GY +G
Sbjct: 365 YVLRHMHITHVEIANQIIHAYAKFGYVVDAREVFNRMRTRDLVSWTSMIKGYVYHGHIDK 424
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+ F+ +L + + TL+ +L A S+LG L K VH ++ + ++ V N+LI
Sbjct: 425 AIILFR-LLQREHLSIDSVTLIGLLQALSQLGCLSFIKEVHCFSYRFFHGKDLSVNNSLI 483
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
YAKCG + +A +F + R + SWN MI AMHGN + L LFD MK + PD V
Sbjct: 484 TTYAKCGKLCTARYIFQQMTERCLTSWNAMIGAYAMHGNYTEVLELFDHMKAGKVTPDEV 543
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
TF IL+AC+H GLV +G F M+ Y+I+P HY C+ DLL RAG L +A + V+
Sbjct: 544 TFTSILTACSHSGLVEEGLQIFGIMMKEYAIVPNEVHYSCIVDLLSRAGRLREAYNLVKS 603
Query: 410 MPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDV 469
MP + ++LL ACR + + EI E + +++LEP + + ++SNI GRW +V
Sbjct: 604 MPSTHSSAAMSALLSACRLYGDTEIGEAIGKQILKLEPHSSGPYALVSNICAQGGRWDEV 663
Query: 470 ARLKIAMRDTGFRKLPGCS 488
A+++ ++T F+ PG S
Sbjct: 664 AQIRAMTKNTEFKSTPGYS 682
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 198/426 (46%), Gaps = 35/426 (8%)
Query: 42 MNRAAAAPLNHF-----TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEM 96
+ R A+ N F T+ +++C G + G VH + K F + F+ ++LI +
Sbjct: 17 LRRYLASKHNKFGLCASTITFCLKTCLSLGTLEFGIGVHVDSIKLNFNSDCFVGSSLIRL 76
Query: 97 YSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG--------DVGSGRRLLDLAPERD 148
YS G + DA+KVF E+ +++ +T+MI+AY G + + + P R
Sbjct: 77 YSQYGKIKDAHKVFDEITNKDIFAYTSMITAYGHSGGSCVYGAFNTAFIMQQQGMLPNR- 135
Query: 149 VVMWSIVISG----YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFE 204
V + S++ + + G V + ++ D + TLL+ Y G VG VF
Sbjct: 136 VTLVSLMHAAAKLRALREGQAVHGYAVRREIGLGDDVFETTLLDMYHKCGGVGLAASVFA 195
Query: 205 EMPER---NVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLG 261
+M R V SWN LI GY RNG+ +A E F++M+ +V+P+ TL + C L
Sbjct: 196 KMDARKMTKVGSWNALIAGYLRNGQALEAFELFRRMMCR-NVLPDLLTLANAIFCCVELN 254
Query: 262 ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
L G +H Y ++G + ++ AL+D+Y K I A +F L +D + +N M+
Sbjct: 255 YLRRGMSIHGYMITMGVELDLVASTALVDLYCKID-ITKARKLFERLGNKDAVVYNVMMT 313
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR-----DGFLYFQSMVD 376
G +G +A+++F +M + + F+ ++SA + + +R G++ +
Sbjct: 314 GYLENGLPVEAVNVFREMVKTNASTNVALFLNLISALSKLRDIRLVRSIHGYVLRHMHIT 373
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
H I QI H + G + A +M D V WTS++ H +++ A
Sbjct: 374 HVEIANQIIH------AYAKFGYVVDAREVFNRMRTR-DLVSWTSMIKGYVYHGHIDKAI 426
Query: 437 LAFQHL 442
+ F+ L
Sbjct: 427 ILFRLL 432
>Medtr3g117150.1 | organelle transcript processing protein, putative
| HC | chr3:54810037-54807667 | 20130731
Length = 571
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 244/457 (53%), Gaps = 23/457 (5%)
Query: 98 SAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDL----------APER 147
S G + A + P N + +I AY + + L L P+
Sbjct: 35 SPSGDLNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKP 94
Query: 148 DVVMWSIVISGYIESGDMVSAREL---FDKMP-NRDVMSWNTLLNGYANSGDVGSFEKVF 203
D +S + A++L +KM D+ N L++ Y+ G++ +VF
Sbjct: 95 DTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVF 154
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGAL 263
+ M R+V SW +I G+ + +A++ F++ML G V N+ T+++VL C+ GAL
Sbjct: 155 DRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVG-VDVNEATVISVLRGCADSGAL 213
Query: 264 DMGKWVH--VYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMIN 321
+G+ VH V + I +K N V ALI MY+KCG +ESA +VF+ + RD+ W MI
Sbjct: 214 SVGRKVHGIVKEKGIDFKAN--VCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIY 271
Query: 322 GLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSII 381
GLA HG +A+ LF +M+ +PD T + +LSA + GLVR+G+++F + YS+
Sbjct: 272 GLACHGMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMK 331
Query: 382 PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQH 441
P I+H+GCM DLL + G L++A F+ MPM+PDAVIW +L+ AC+ H + E AE +H
Sbjct: 332 PNIKHFGCMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKH 391
Query: 442 LIELE---PKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVE 498
L EL+ + ++++ SN+Y G+W D A ++ M G K PG S IE + V E
Sbjct: 392 L-ELQGMSAHDSGSYILASNVYASTGKWCDKAEVRELMNKKGLVKPPGSSRIEVDGVVHE 450
Query: 499 FYSLDERHPETESIYRALRGLTMLLRLHGYVPNLVDV 535
F D HP+TE I+ L + LR GY P + +V
Sbjct: 451 FVMGDYDHPDTEKIFIKLDQMVDKLRKEGYNPKVSEV 487
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 171/355 (48%), Gaps = 16/355 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTES---HRDVVVLFAEM--NRAAAAPLNHFTL 55
+ +AR + + P N+ +N + YS T + H + LF M + FT
Sbjct: 40 LNYARLLLNTNPSLNSYYYNTIIRAYSHTSNPTHHFQALSLFIFMLQPHTNVPKPDTFTY 99
Query: 56 PIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE 115
++SC + ++ +Q+H K GF ++ ++ ALI MYS G + A +VF M
Sbjct: 100 SFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSH 159
Query: 116 RNVVVWTAMISAYI----SCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL 171
R+VV WT+MI+ ++ + + +R+L++ + + V+ G +SG + R++
Sbjct: 160 RDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKV 219
Query: 172 FDKMPNRDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ + + L++ Y+ G + S +VF+++ +R+V+ W +I G A +G
Sbjct: 220 HGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWTAMIYGLACHGMC 279
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGN 286
+A+E F +M +V P++ T++ VL A G + G + + + K N+
Sbjct: 280 KEAIELFLEMET-CNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFG 338
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMK 340
++D+ AK G +E A D N + + D + W T+I +H +T A L ++
Sbjct: 339 CMVDLLAKGGCLEEAEDFINAMPMKPDAVIWRTLIWACKVHADTERAERLMKHLE 393
>Medtr5g071190.1 | PPR containing plant-like protein | HC |
chr5:30193271-30196237 | 20130731
Length = 887
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 169/582 (29%), Positives = 277/582 (47%), Gaps = 73/582 (12%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A+K+FD M E ++ WNAM +G+ F M + P + T I++
Sbjct: 234 MDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEP-SLVTWNILIS 292
Query: 61 SCSKAGAVREGEQVHC---VAAKRGFKW-----NSFLCTALIEMYSAKGSVGDAYKVFGE 112
++ G HC + R +W + + T++I ++ KG + A + E
Sbjct: 293 CYNQLG--------HCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKE 344
Query: 113 M---------------------------------------PERNVVVWTAMISAYISCGD 133
M NV+V ++I Y CGD
Sbjct: 345 MFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGD 404
Query: 134 VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRD----VMSWNTLLNG 189
+ + + + D+ ERDV W+ +I GY ++G A ELF KM D +++WN ++ G
Sbjct: 405 LKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITG 464
Query: 190 YANSGDVGSFEKVFEEM-----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
Y SG +F+ + +RN SWN LI G+ ++G+ AL+ F+ M ++
Sbjct: 465 YMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQF-CHIL 523
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
PN T++++L C+ L A K +H +A + V N LID YAK G + + ++
Sbjct: 524 PNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNI 583
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLV 364
FN L +D +SWN+M++ +HG + AL LF QM+ QP+ TF IL A H G+V
Sbjct: 584 FNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGMV 643
Query: 365 RDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLG 424
+G F + Y + +EHY M LLGR+G L +A+ F++ MP+EP++ +W +LL
Sbjct: 644 DEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALLT 703
Query: 425 ACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKL 484
ACR H+N +A LA + ++E EP N +LS Y G+++ + K
Sbjct: 704 ACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKFEPEG-------EKAVNKP 756
Query: 485 PGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLRLH 526
G S IE N+ V F D+ +P + ++ L+ + + ++ H
Sbjct: 757 IGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTH 798
Score = 192 bits (489), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 139/496 (28%), Positives = 235/496 (47%), Gaps = 65/496 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G ARKVF++M N TW+AM G S +S +VV LF M R P + F LP V++
Sbjct: 133 LGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLP-DEFLLPKVLQ 191
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C K + G +H + +RG +W+ L +++ +Y+ G + A K+F M ER+ V
Sbjct: 192 ACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVA 251
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERD-----VVMWSIVISGYIESG------DMVSAR 169
W AMIS + G++G ++ D A ++D +V W+I+IS Y + G D++
Sbjct: 252 WNAMISGFCQNGEIGQAQKYFD-AMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKM 310
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
E F P DV +W ++++G + + GR S
Sbjct: 311 EWFGIAP--DVYTWTSMISG-------------------------------FTQKGRISH 337
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
AL+ K+M + G V N+ T+ + AC+ L +L MG +H A + N+ VGN+LI
Sbjct: 338 ALDLLKEMFLAG-VEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLI 396
Query: 290 DMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGV 349
DMY KCG +++A +F+ + RD+ SWN++I G G A LF +M+ S P+ +
Sbjct: 397 DMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNII 456
Query: 350 TFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRK 409
T+ +++ G F+S+ + + ++G D+A+ R
Sbjct: 457 TWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRN 516
Query: 410 MP---MEPDAVIWTSLLGAC----------RTH----KNVEIAELAFQHLIELEPKNPAN 452
M + P++V S+L C H + + ++EL+ +L+ N
Sbjct: 517 MQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGN 576
Query: 453 FVMLSNIYKDLGRWQD 468
+ NI+ +L W+D
Sbjct: 577 LMYSKNIFNELS-WKD 591
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 122/225 (54%), Gaps = 2/225 (0%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
L++ YA G +G KVF EM RN+++W+ +IGG +RN + + + F M+ +G V+P
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDG-VLP 181
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVF 305
++F L VL AC + L+ G+ +H G + + + N+++ +YAKCG ++ A +F
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241
Query: 306 NCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
+C+D RD ++WN MI+G +G A FD M+ +P VT+ ++S +G
Sbjct: 242 DCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHC- 300
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM 410
D + ++ + I P + + M + G + A+ +++M
Sbjct: 301 DLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 96/216 (44%), Gaps = 12/216 (5%)
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM- 282
NG S+A+ + +G V T + +L +C + +GK +H IG N+
Sbjct: 61 NGSLSEAVTILDSLAEQGCRV-KPITYMNLLQSCIDKDCIFIGKELH---SRIGLVENVN 116
Query: 283 -FVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN 341
FV L+ MYAKCG++ A VFN + R++ +W+ MI G + + + + + LF M
Sbjct: 117 PFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMR 176
Query: 342 SREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
PD +L AC + G L SMV + + + + G +D
Sbjct: 177 DGVLPDEFLLPKVLQACGKCRDLETGRL-IHSMVIRRGMRWSKHLRNSIMAVYAKCGEMD 235
Query: 402 QAVSFVRKMPMEPDAVIWTSLL-GACRTHKNVEIAE 436
A M E D+V W +++ G C +N EI +
Sbjct: 236 CAKKIFDCMD-ERDSVAWNAMISGFC---QNGEIGQ 267
>Medtr3g080230.1 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 211/349 (60%), Gaps = 5/349 (1%)
Query: 147 RDVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKV 202
R + + + +I Y G +SAR++F+ + D++SW+ LL +A +G++ KV
Sbjct: 138 RHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKV 197
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+ MPER+V SW +++ Y++ R + L+ F++M + G V P++ T+++V+ AC+ LG
Sbjct: 198 FDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAG-VWPDEVTVLSVISACAELGD 256
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
+MG+ VH + E G+ + + N+LIDMY KCG +E A VF+ R+ +I+WN M+
Sbjct: 257 AEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMV 316
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
A HG DA LF+ M S PDGVT + +L A H G V +G F+SM Y + P
Sbjct: 317 CANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+IEHYG + D+LGR+G L +A + + MP+ + VIW +LLGACR H +V + E + L
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKL 436
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+EL+P +++L +IY GR + ++ AM +G RK PGCS +E
Sbjct: 437 LELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 51/375 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +FD+MP+P T +N + +S + + + F M R + AP + F+ +++
Sbjct: 57 LSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAP-DEFSFTFLLK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ER 116
S ++ + +H K GF + + ALI +Y+ G A KVF + +
Sbjct: 116 S--RSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDV 173
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
++V W+ ++ A+ G++ R++ D PERDVV W+I++S Y ++ +LF +M
Sbjct: 174 DIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMR 233
Query: 176 -----PNR-DVMS---------------------------W-----NTLLNGYANSGDVG 197
P+ V+S W N+L++ Y G +
Sbjct: 234 LAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+VF+ +++ +WN ++ A +G DA F+ M+ G VVP+ T++A+L+A
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSG-VVPDGVTILALLVAY 352
Query: 258 SRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--DRRDII 314
+ G +D G + G + + A++DM + G ++ A ++ + D+I
Sbjct: 353 AHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVI 412
Query: 315 SWNTMINGLAMHGNT 329
W ++ +HG+
Sbjct: 413 -WGALLGACRIHGDV 426
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 120/284 (42%), Gaps = 49/284 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD MPE + +W M + YS + + + LF EM A P + T+ V+ +C+
Sbjct: 194 ARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWP-DEVTVLSVISACA 252
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G G VH + GF W LC +LI+MY G + +A++VF ++++ W A
Sbjct: 253 ELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNA 312
Query: 124 M-----------------------------------ISAYISCGDVGSGRRLL-----DL 143
M + AY G V G RL D
Sbjct: 313 MMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDY 372
Query: 144 APERDVVMWSIVISGYIESGDMVSARELFDKM--PNRDVMSWNTLLNGYANSGDVGSFEK 201
E + + V+ SG + A L M P+ DV+ W LL GDVG E+
Sbjct: 373 GVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVI-WGALLGACRIHGDVGMGER 431
Query: 202 VFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
V +++ P+ Y + +L Y GR ++A E + ML G
Sbjct: 432 VIKKLLELKPDEGGY-YILLRDIYVAAGRTAEANEMRQAMLASG 474
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 40/285 (14%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
GD+ +F++MP+ + +N LI ++ + S + F +M + P++F+
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMR-RNSIAPDEFSF--T 111
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY--------------------- 292
L SR + + +H G+ ++ V NALI +Y
Sbjct: 112 FLLKSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGL 171
Query: 293 --------------AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
AK G ++ A VF+ + RD++SW M++ + + L LF +
Sbjct: 172 DVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQE 231
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ + PD VT + ++SAC +G G + V+ + + D+ G+ G
Sbjct: 232 MRLAGVWPDEVTVLSVISACAELGDAEMGRM-VHKFVEENGFGWMVALCNSLIDMYGKCG 290
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
L++A + + W +++ C H E A F+ +I
Sbjct: 291 CLEEAWQVFDRTK-RKSLITWNAMMMVCANHGYAEDAFRLFEGMI 334
>Medtr3g080230.2 | PPR containing plant-like protein | HC |
chr3:36292375-36290915 | 20130731
Length = 486
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 133/349 (38%), Positives = 211/349 (60%), Gaps = 5/349 (1%)
Query: 147 RDVVMWSIVISGYIESGDMVSARELFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKV 202
R + + + +I Y G +SAR++F+ + D++SW+ LL +A +G++ KV
Sbjct: 138 RHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKV 197
Query: 203 FEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGA 262
F+ MPER+V SW +++ Y++ R + L+ F++M + G V P++ T+++V+ AC+ LG
Sbjct: 198 FDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAG-VWPDEVTVLSVISACAELGD 256
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
+MG+ VH + E G+ + + N+LIDMY KCG +E A VF+ R+ +I+WN M+
Sbjct: 257 AEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNAMMMV 316
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIP 382
A HG DA LF+ M S PDGVT + +L A H G V +G F+SM Y + P
Sbjct: 317 CANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEP 376
Query: 383 QIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL 442
+IEHYG + D+LGR+G L +A + + MP+ + VIW +LLGACR H +V + E + L
Sbjct: 377 RIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKL 436
Query: 443 IELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+EL+P +++L +IY GR + ++ AM +G RK PGCS +E
Sbjct: 437 LELKPDEGGYYILLRDIYVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 51/375 (13%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ +A +FD+MP+P T +N + +S + + + F M R + AP + F+ +++
Sbjct: 57 LSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAP-DEFSFTFLLK 115
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP----ER 116
S ++ + +H K GF + + ALI +Y+ G A KVF + +
Sbjct: 116 S--RSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDV 173
Query: 117 NVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM- 175
++V W+ ++ A+ G++ R++ D PERDVV W+I++S Y ++ +LF +M
Sbjct: 174 DIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMR 233
Query: 176 -----PNR-DVMS---------------------------W-----NTLLNGYANSGDVG 197
P+ V+S W N+L++ Y G +
Sbjct: 234 LAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLE 293
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
+VF+ +++ +WN ++ A +G DA F+ M+ G VVP+ T++A+L+A
Sbjct: 294 EAWQVFDRTKRKSLITWNAMMMVCANHGYAEDAFRLFEGMIGSG-VVPDGVTILALLVAY 352
Query: 258 SRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCL--DRRDII 314
+ G +D G + G + + A++DM + G ++ A ++ + D+I
Sbjct: 353 AHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVI 412
Query: 315 SWNTMINGLAMHGNT 329
W ++ +HG+
Sbjct: 413 -WGALLGACRIHGDV 426
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 120/284 (42%), Gaps = 49/284 (17%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARKVFD MPE + +W M + YS + + + LF EM A P + T+ V+ +C+
Sbjct: 194 ARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQEMRLAGVWP-DEVTVLSVISACA 252
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ G G VH + GF W LC +LI+MY G + +A++VF ++++ W A
Sbjct: 253 ELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCLEEAWQVFDRTKRKSLITWNA 312
Query: 124 M-----------------------------------ISAYISCGDVGSGRRLL-----DL 143
M + AY G V G RL D
Sbjct: 313 MMMVCANHGYAEDAFRLFEGMIGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDY 372
Query: 144 APERDVVMWSIVISGYIESGDMVSARELFDKM--PNRDVMSWNTLLNGYANSGDVGSFEK 201
E + + V+ SG + A L M P+ DV+ W LL GDVG E+
Sbjct: 373 GVEPRIEHYGAVVDMLGRSGRLQEAYNLLTSMPIPSNDVI-WGALLGACRIHGDVGMGER 431
Query: 202 VFEEM----PERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG 241
V +++ P+ Y + +L Y GR ++A E + ML G
Sbjct: 432 VIKKLLELKPDEGGY-YILLRDIYVAAGRTAEANEMRQAMLASG 474
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 116/285 (40%), Gaps = 40/285 (14%)
Query: 194 GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
GD+ +F++MP+ + +N LI ++ + S + F +M + P++F+
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMR-RNSIAPDEFSF--T 111
Query: 254 LLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY--------------------- 292
L SR + + +H G+ ++ V NALI +Y
Sbjct: 112 FLLKSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGL 171
Query: 293 --------------AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
AK G ++ A VF+ + RD++SW M++ + + L LF +
Sbjct: 172 DVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSAYSKAKRPHETLDLFQE 231
Query: 339 MKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAG 398
M+ + PD VT + ++SAC +G G + V+ + + D+ G+ G
Sbjct: 232 MRLAGVWPDEVTVLSVISACAELGDAEMGRM-VHKFVEENGFGWMVALCNSLIDMYGKCG 290
Query: 399 LLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLI 443
L++A + + W +++ C H E A F+ +I
Sbjct: 291 CLEEAWQVFDRTK-RKSLITWNAMMMVCANHGYAEDAFRLFEGMI 334
>Medtr7g106930.1 | pentatricopeptide (PPR) repeat protein | HC |
chr7:43569310-43567382 | 20130731
Length = 526
Score = 259 bits (661), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/368 (36%), Positives = 211/368 (57%), Gaps = 31/368 (8%)
Query: 164 DMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR 223
D+++A+ +F M DV SW ++ GY GDV S K+F+ MP +N+ +W+ +I GY R
Sbjct: 33 DLMAAKCIFKMMGRFDVASWTCMIKGYFKCGDVDSARKLFDRMPVKNLVTWSTMINGYLR 92
Query: 224 NGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMF 283
N F A+E F+ ++ EG +V N+ V + AC+ LGAL G+ + +A I N+
Sbjct: 93 NNCFDKAVEIFEILIDEG-LVANE---VGAVSACAHLGALAAGEKAYEHAIRINLDLNVI 148
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+G A++DMYA+CG +E AV VF + +D+ISW ++I+G+AMHG +AL F M +
Sbjct: 149 LGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTSLISGVAMHGYAEEALEYFYVMVKNG 208
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
P +TF +L A +H GLV G F+SM Y + P++EHYGCM DLLGRAG L++A
Sbjct: 209 IVPRDITFTAVLKAYSHGGLVEKGQEIFESMKRDYRLEPRLEHYGCMVDLLGRAGKLEEA 268
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+F+ +MP++P+A ++P++ + +LSNIY
Sbjct: 269 ENFILEMPIKPNA---------------------------PMKPEHSGYYALLSNIYART 301
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
+W+D ++ M++ G RK PG S+IE + EF ++RHPE + I R + +
Sbjct: 302 NKWKDATVMRRLMKEKGVRKQPGYSLIEIDGKTHEFTIGNKRHPEIDKIERMWEKILQKI 361
Query: 524 RLHGYVPN 531
+L GY+ N
Sbjct: 362 KLAGYMGN 369
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 109/235 (46%), Gaps = 37/235 (15%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G QVH K GF + + +L+ MY + A +F M +V WT MI Y
Sbjct: 2 GMQVHGQVVKYGFGSDFHVQRSLVCMYGCLCDLMAAKCIFKMMGRFDVASWTCMIKGYFK 61
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR------------ 178
CGDV S R+L D P +++V WS +I+GY+ + A E+F+ + +
Sbjct: 62 CGDVDSARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIFEILIDEGLVANEVGAVSA 121
Query: 179 ------------------------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
+V+ +++ YA G+V +VFEEM E++V SW
Sbjct: 122 CAHLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISW 181
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
LI G A +G +ALE F M+ G +VP D T AVL A S G ++ G+ +
Sbjct: 182 TSLISGVAMHGYAEEALEYFYVMVKNG-IVPRDITFTAVLKAYSHGGLVEKGQEI 235
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 25/269 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
ARK+FD+MP N TW+ M NGY V +F E+ N V +C+
Sbjct: 68 ARKLFDRMPVKNLVTWSTMINGYLRNNCFDKAVEIF-EILIDEGLVANEVG---AVSACA 123
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
GA+ GE+ + A + N L TA+++MY+ G+V A +VF EM E++V+ WT+
Sbjct: 124 HLGALAAGEKAYEHAIRINLDLNVILGTAIVDMYARCGNVEKAVRVFEEMKEKDVISWTS 183
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVV----MWSIVISGYIESGDMVSARELFDKMPNRD 179
+IS G + + +V ++ V+ Y G + +E+F+ M RD
Sbjct: 184 LISGVAMHGYAEEALEYFYVMVKNGIVPRDITFTAVLKAYSHGGLVEKGQEIFESM-KRD 242
Query: 180 ------VMSWNTLLNGYANSGDVGSFEKVFEEM---------PERNVYSWNVLIGGYARN 224
+ + +++ +G + E EM PE + Y + +L YAR
Sbjct: 243 YRLEPRLEHYGCMVDLLGRAGKLEEAENFILEMPIKPNAPMKPEHSGY-YALLSNIYART 301
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAV 253
++ DA + M +G ++L+ +
Sbjct: 302 NKWKDATVMRRLMKEKGVRKQPGYSLIEI 330
>Medtr7g108530.1 | PPR containing plant-like protein | HC |
chr7:44212645-44210679 | 20130731
Length = 467
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/314 (41%), Positives = 194/314 (61%), Gaps = 2/314 (0%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ N+LL+ YA+ G + ++F+EMP+R+V SW V+I GY G+++DAL F+QM
Sbjct: 143 DIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQ 202
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G VVPN T+V L AC+ A++MG W+ G++ ++ +G ALIDMY KCG +
Sbjct: 203 Y-GGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRV 261
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
E + VF + +++ + N +I GLA+ + +AL F++M+ + D VT V +LSAC
Sbjct: 262 EEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSAC 321
Query: 359 THMGLVRDGFLYFQSMVD-HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
+H GLV G F +VD Y +P ++HY CM DLL RAG L +A ++ MP EP A
Sbjct: 322 SHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAA 381
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+W SLL ++ ++E +E A L+ELEP N A +V LSN+Y + GRW DV R++ M+
Sbjct: 382 MWGSLLLGSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAEAGRWSDVERIRGMMK 441
Query: 478 DTGFRKLPGCSVIE 491
+ G K GCS +E
Sbjct: 442 ERGLTKDLGCSSVE 455
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 155/308 (50%), Gaps = 12/308 (3%)
Query: 11 MPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVRE 70
+P+P+ +N++ +S + + L++ M++ + P N+FT P + +S S + +
Sbjct: 69 IPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMHKNSILP-NNFTFPFLFKSLSDSHDFVQ 127
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
+ V+ K G+ + ++ +L+++Y++ G + ++F EMP+R+VV WT MI Y +
Sbjct: 128 SQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRN 187
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL---FDKMPNR-----DVMS 182
G + + VV + + + + A E+ D M R DV+
Sbjct: 188 GGKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVIL 247
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
L++ Y G V KVF +M E+NV++ NV+I G A +AL F +M ++G
Sbjct: 248 GTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDG- 306
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVH--VYAESIGYKGNMFVGNALIDMYAKCGVIES 300
V ++ TLV VL ACS G ++ G+++ + G+ N+ ++D+ A+ G ++
Sbjct: 307 VRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQE 366
Query: 301 AVDVFNCL 308
A D+ C+
Sbjct: 367 AFDIIKCM 374
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 83/153 (54%), Gaps = 1/153 (0%)
Query: 206 MPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
+P+ +V+ +N LI ++ + + L + M + ++PN+FT + + S
Sbjct: 69 IPKPHVFIFNSLIRAFSHSHIPNTPLSLYSHMH-KNSILPNNFTFPFLFKSLSDSHDFVQ 127
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
+ V+ + +GY +++V N+L+D+YA G +E +F+ + +RD++SW MI G
Sbjct: 128 SQCVYTHVIKLGYVNDIYVNNSLLDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRN 187
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
G DAL +F+QM+ P+ VT V LSAC
Sbjct: 188 GGKYNDALLVFEQMQYGGVVPNRVTMVNALSAC 220
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 109/234 (46%), Gaps = 17/234 (7%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSK 64
R++FD+MP+ + +W M GY + D +++F +M P N T+ + +C+
Sbjct: 164 RQLFDEMPQRDVVSWTVMIMGYRNGGKYNDALLVFEQMQYGGVVP-NRVTMVNALSACAS 222
Query: 65 AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+ A+ G + + + G++ + L TALI+MY G V + KVF +M E+NV +
Sbjct: 223 SCAIEMGVWIDDMVRRNGWELDVILGTALIDMYVKCGRVEEGLKVFCDMKEKNVFTLNVV 282
Query: 125 ISAYISCGDVGSG-----RRLLDLAPERDVVMWSIVI----SGYIESGDMVSARELFDK- 174
I V R LD +V + +++ SG +E G + + + K
Sbjct: 283 IKGLALAKSVEEALLWFNRMELDGVRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKY 342
Query: 175 --MPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSW-NVLIGGYARN 224
+PN V + +++ A +G + + + MP E W ++L+G +R+
Sbjct: 343 GFLPN--VKHYACMVDLLARAGQLQEAFDIIKCMPFEPTAAMWGSLLLGSKSRD 394
>Medtr5g038580.1 | PPR containing plant-like protein | HC |
chr5:16954387-16952525 | 20130731
Length = 620
Score = 258 bits (659), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 272/535 (50%), Gaps = 51/535 (9%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A ++FD+MP+P +NA+ +G S V LF ++ P N T+ + + S
Sbjct: 89 YALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLFRQIGFWNIRP-NSVTI-VSLLSA 146
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+QVHC+A K G +++ ++ T+L+ YS G + + KVF + +NVV +
Sbjct: 147 RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLVSSNKVFENLRVKNVVTYN 206
Query: 123 AMISAYISCG------------------------------------DVGSGRRLLDLAPE 146
A +S + G ++ G+++ L+ +
Sbjct: 207 AFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSACATLSNIRLGKQVHGLSMK 266
Query: 147 RD----VVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKV 202
+ V++ + ++ Y + G SA ++F + R++++WN+++ G + + ++
Sbjct: 267 LEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVEL 326
Query: 203 FEEMPERNVY----SWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACS 258
FE M + + +WN LI G+A+ G +A + F +M G V P L ++L C
Sbjct: 327 FERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKMQCAG-VAPCLKILTSLLSVCG 385
Query: 259 RLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR--DIISW 316
L K +H YA I + F+ AL+D Y KCG + A VF+ D + D W
Sbjct: 386 DSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFDQFDVKPDDPAFW 445
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
N MI G +G+ A +F +M + QP+ TFV +LSAC+H G + G +F+ M+
Sbjct: 446 NAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQIERGLRFFR-MIR 504
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
Y + P+ EH+GC+ DLLGRAG L +A V+++ EP A ++ SLLGACR + + + E
Sbjct: 505 KYGLDPKPEHFGCVVDLLGRAGQLGEARDLVQELA-EPPASVFDSLLGACRCYLDSNLGE 563
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
LI++EPKNPA V+LSNIY LGRW +V R++ + D G K G S+IE
Sbjct: 564 EMAMKLIDIEPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIE 618
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/512 (25%), Positives = 238/512 (46%), Gaps = 62/512 (12%)
Query: 32 HRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCT 91
+++ + L++ ++ ++ P N FT PI++++CS + + + +H K GF + T
Sbjct: 16 YKEALNLYSHLHSSSPTP-NTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTST 74
Query: 92 ALIEMYSAKG-SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVV 150
ALI Y+A S A ++F EMP+ + + A++S G G L R +
Sbjct: 75 ALIASYAANTRSFHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAVWLF-----RQIG 129
Query: 151 MWSIVISGYIESGDMVSARELFDKMPNR-------------DVMSWNTLLNGYANSGDVG 197
W+I + + ++SAR++ ++ + DV +L+ Y+ G +
Sbjct: 130 FWNIRPNS-VTIVSLLSARDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAYSKCGVLV 188
Query: 198 SFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLAC 257
S KVFE + +NV ++N + G +NG + FK M + + PN TLV+V+ AC
Sbjct: 189 SSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSVVSAC 248
Query: 258 SRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWN 317
+ L + +GK VH + + ++ V +L+DMY+KCG SA DVF+ ++R++I+WN
Sbjct: 249 ATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRSEKRNLITWN 308
Query: 318 TMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDH 377
+MI G+ M+ + A+ LF++M + PD T+ ++S G+ + F YF M
Sbjct: 309 SMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYFSKM-QC 367
Query: 378 YSIIPQIEHYGCMADLLGRAGLLDQA-------------------------------VSF 406
+ P ++ + + G + +L A VSF
Sbjct: 368 AGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSF 427
Query: 407 VR----KMPMEP-DAVIWTSLLGACRTHKNVEIA-ELAFQHLIELEPKNPANFVMLSNIY 460
R + ++P D W +++G T+ + E A E+ ++ L E+ N A FV + +
Sbjct: 428 ARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSAC 487
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLP---GCSV 489
G+ + R +R G P GC V
Sbjct: 488 SHSGQIERGLRFFRMIRKYGLDPKPEHFGCVV 519
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 111/277 (40%), Gaps = 53/277 (19%)
Query: 2 GHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
G A VF + + N TWN+M G + V LF M P
Sbjct: 290 GSAFDVFSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILP------------ 337
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
WNS LI ++ KG +A+K F +M V
Sbjct: 338 -------------------DSATWNS-----LISGFAQKGVCVEAFKYFSKMQCAGVAPC 373
Query: 122 TAMISAYIS-CGD---VGSGRRL----LDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
++++ +S CGD + S + + L + ++D + + ++ Y++ G + AR +FD
Sbjct: 374 LKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATALVDTYMKCGCVSFARFVFD 433
Query: 174 KMPNR--DVMSWNTLLNGYANSGDVGS----FEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ + D WN ++ GY +GD S F ++ +EM + N ++ ++ + +G+
Sbjct: 434 QFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQPNSATFVSVLSACSHSGQI 493
Query: 228 SDALEAFKQMLVEG-DVVPNDFTLVAVLLACSRLGAL 263
L F+ + G D P F V LL R G L
Sbjct: 494 ERGLRFFRMIRKYGLDPKPEHFGCVVDLLG--RAGQL 528
>Medtr8g102760.1 | PPR containing plant-like protein | HC |
chr8:43261430-43259561 | 20130731
Length = 447
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 191/313 (61%), Gaps = 7/313 (2%)
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVP 245
+N Y +GD S KVF+E E + SWN LI G ++ G DA+ F M G P
Sbjct: 138 FINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVVFVDMKRHG-FEP 196
Query: 246 NDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGN----MFVGNALIDMYAKCGVIESA 301
+ T+V+V+ AC +G L + +H Y K N + + N+LIDMY KCG ++ A
Sbjct: 197 DGITMVSVMSACGSIGDLYLALQLHKYV--FQAKTNEWTVILMSNSLIDMYGKCGRMDLA 254
Query: 302 VDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM 361
+VF ++ R++ SW +MI G AMHG+ +AL F M+ S +P+ VTF+G+LSAC H
Sbjct: 255 YEVFATMEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMRESGVKPNYVTFIGVLSACVHG 314
Query: 362 GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTS 421
G V++G YF M + Y I PQ++HYGCM DLLGRAGL D A V +MPM+P++V+W
Sbjct: 315 GTVQEGRFYFDMMKNIYGITPQLQHYGCMVDLLGRAGLFDDARRMVEEMPMKPNSVVWGC 374
Query: 422 LLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGF 481
L+GAC H NV++AE ++L LEP N +V+LSNIY + G W++V R++ M++
Sbjct: 375 LMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNIYANKGLWKEVERIRSFMKEGRL 434
Query: 482 RKLPGCSVIECND 494
K+P S+ +D
Sbjct: 435 AKIPAYSITTNSD 447
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 169/365 (46%), Gaps = 18/365 (4%)
Query: 3 HARKVFDKMPEPNTAT--WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+A + + E N A+ WN + Y+ ES ++ + ++ M RA P + +TLPIV++
Sbjct: 47 YAHILLTRFLESNPASFNWNNIIRSYTRLESPQNALRIYVSMLRAGVLP-DRYTLPIVLK 105
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+ S++ A++ G+QVH K G + N + + I +Y G A+KVF E E +
Sbjct: 106 AVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGS 165
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER-----DVVMWSIVISGYIESGDMVSARELFDKM 175
W A+IS +S G + ++ + +R D + V+S GD+ A +L +
Sbjct: 166 WNALISG-LSQGGLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYV 224
Query: 176 PNRDVMSW------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
W N+L++ Y G + +VF M +RNV SW +I GYA +G +
Sbjct: 225 FQAKTNEWTVILMSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAMHGHAKE 284
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI-GYKGNMFVGNAL 288
AL F M E V PN T + VL AC G + G++ ++I G + +
Sbjct: 285 ALGCFHCMR-ESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMMKNIYGITPQLQHYGCM 343
Query: 289 IDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
+D+ + G+ + A + + + + + W ++ HGN A + + ++ +
Sbjct: 344 VDLLGRAGLFDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNE 403
Query: 348 GVTFV 352
GV V
Sbjct: 404 GVYVV 408
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 136/296 (45%), Gaps = 30/296 (10%)
Query: 169 RELFDKMPNRDVMSWN-------TLLNGYANSGDVGS------FEKVFEEMPERNVYSWN 215
R F +P + S N TLL+ D+ + E P ++WN
Sbjct: 9 RRCFCSVPQHSITSGNDPVTVIATLLSNTTRIRDLNQIYAHILLTRFLESNPAS--FNWN 66
Query: 216 VLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAES 275
+I Y R +AL + ML G V+P+ +TL VL A S+ A+ +G+ VH Y
Sbjct: 67 NIIRSYTRLESPQNALRIYVSMLRAG-VLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIK 125
Query: 276 IGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSL 335
+G + N + + I++Y K G +SA VF+ + SWN +I+GL+ G DA+ +
Sbjct: 126 LGLQSNEYCESGFINLYCKAGDFDSAHKVFDENHEPKLGSWNALISGLSQGGLAMDAIVV 185
Query: 336 FDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL-------YFQSMVDHYSIIPQIEHYG 388
F MK +PDG+T V ++SAC +G D +L FQ+ + +++I
Sbjct: 186 FVDMKRHGFEPDGITMVSVMSACGSIG---DLYLALQLHKYVFQAKTNEWTVILM---SN 239
Query: 389 CMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ D+ G+ G +D A M + + WTS++ H + + A F + E
Sbjct: 240 SLIDMYGKCGRMDLAYEVFATME-DRNVSSWTSMIVGYAMHGHAKEALGCFHCMRE 294
>Medtr7g113540.1 | PPR containing plant-like protein | HC |
chr7:46789868-46787166 | 20130731
Length = 650
Score = 256 bits (653), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 166/572 (29%), Positives = 270/572 (47%), Gaps = 73/572 (12%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA--AAAPLNHFTLPIVVR 60
+A VFD MP +T +WN M +G+ F +M + + TL ++
Sbjct: 95 NAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLS 154
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
C +R G + T++ +M VG ER + V
Sbjct: 155 GCD---GLRLG-----------------ISTSVTQMIHGLVFVGGF--------EREITV 186
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM----- 175
A+I++Y C GR++ D ER+VV W+ VISG ++ + LF +M
Sbjct: 187 GNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGS 246
Query: 176 --PN---------------------------------RDVMSWNTLLNGYANSGDVGSFE 200
PN D+ + L++ Y+ G + +
Sbjct: 247 VSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAW 306
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
++FE E + S V++ +A+NG +A++ F +M+ G V D +V+ +L +
Sbjct: 307 QIFESAEELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEV--DANMVSAVLGVFGV 364
Query: 261 GA-LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTM 319
G L +GK +H + N FVGN L++MY+KCG + ++ VF + +++ +SWN++
Sbjct: 365 GTYLALGKQIHSLIIKKNFCENPFVGNGLVNMYSKCGDLSDSLLVFYQMTQKNSVSWNSV 424
Query: 320 INGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYS 379
I A HG+ AL +++M+ P VTF+ +L AC+H GLV G +SM + +
Sbjct: 425 IAAFARHGDGFKALQFYEEMRVEGVAPTDVTFLSLLHACSHAGLVEKGMELLESMTNDHG 484
Query: 380 IIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAF 439
I P+ EHY C+ D+LGRAG L++A F+ +P ++W +LLGAC H + E+ + A
Sbjct: 485 ISPRSEHYACVVDMLGRAGHLNEAKKFIEGLPEHGGVLVWQALLGACSIHGDSEMGKYAA 544
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
L P +PA +V+++NIY G W++ A M++ G K G S IE V F
Sbjct: 545 DRLFSAAPASPAPYVLMANIYSSEGNWKERASSIKRMKEMGVAKEVGISWIEIEKKVNSF 604
Query: 500 YSLDERHPETESIYRALRGLTMLLRLHGYVPN 531
D+ HPE + I+ L GL L+ GYVP+
Sbjct: 605 VVGDKLHPEADVIFWVLSGLLKHLKDEGYVPD 636
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 194/436 (44%), Gaps = 31/436 (7%)
Query: 50 LNHFTLPIVVRSCSKAGAVREGEQVHCVAAKR-------GFKWNS-FLCTALIEMYSAKG 101
LNH L ++ C + + G +H K+ G + N+ F+ +L+ MYS G
Sbjct: 32 LNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCG 91
Query: 102 SVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPER-------DVVMWSI 154
+A VF MP R+ V W MIS ++ GD + + E D +
Sbjct: 92 EFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTT 151
Query: 155 VISGY--IESGDMVSARELFDKMP-----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMP 207
++SG + G S ++ + R++ N L+ Y KVF+EM
Sbjct: 152 MLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMI 211
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
ERNV +W +I G A+N + D+L F QM G V PN T ++ L+ACS L L G+
Sbjct: 212 ERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQ 271
Query: 268 WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHG 327
+H +G + ++ + +AL+D+Y+KCG +++A +F + D +S ++ A +G
Sbjct: 272 KIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNG 331
Query: 328 NTADALSLFDQMKNSREQPDG---VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+A+ +F +M + D +G+ T++ L + S++ +
Sbjct: 332 FEEEAIQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQ----IHSLIIKKNFCENP 387
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
+ ++ + G L ++ +M + ++V W S++ A H + L F +
Sbjct: 388 FVGNGLVNMYSKCGDLSDSLLVFYQMT-QKNSVSWNSVIAAFARHGD-GFKALQFYEEMR 445
Query: 445 LEPKNPANFVMLSNIY 460
+E P + LS ++
Sbjct: 446 VEGVAPTDVTFLSLLH 461
>Medtr1g052100.1 | PPR containing plant-like protein | HC |
chr1:20983048-20985397 | 20130731
Length = 733
Score = 254 bits (649), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/496 (31%), Positives = 258/496 (52%), Gaps = 16/496 (3%)
Query: 6 KVFDKMPE--PNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
KVF++M N T+NAM +G+ E D ++F +M+R + L+ T V+ SC
Sbjct: 243 KVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMHRGSVC-LSEVTFVSVLSSCC 301
Query: 64 KAGAVREGEQVHCVAAKRGFKWN-SFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVVW 121
++R G Q +A K GF + + A + MYS G V +A VF M E R++V W
Sbjct: 302 ---SLRVGCQAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEIMEESRDLVSW 358
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG-YIESGDMVSARELFDKMPNRD- 179
M+S + ++ L + R+ + G + + D + E+ + ++
Sbjct: 359 NVMVSMFFQ-ENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMVEMIHSVLCKNG 417
Query: 180 ---VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
V N L++ Y+ +G + ++F ++ +++ SWN +I G+ NG LE F
Sbjct: 418 LNKVEVLNALISSYSRNGQIKRAFQIFSDLAYKSLISWNSIISGFVLNGYPMQGLEKFSA 477
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
+L + PN ++L L CS +D GK VH Y G+ + +GNAL+ MY+KCG
Sbjct: 478 LL-NTHLKPNAYSLSLALSICSCTPDMDHGKQVHGYILRHGFDSEISLGNALVTMYSKCG 536
Query: 297 VIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSRE-QPDGVTFVGIL 355
++ ++ VFN + RD I+WN +I+ + HG +A+ F+ M+ S +PD TF +L
Sbjct: 537 FLDRSLSVFNEMVERDTITWNAIISAYSQHGQGKEAVHCFEAMQISPGIKPDHATFTAVL 596
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
SAC+H GLV D F MV+ Y +P ++H+ C+ DLLGR+G LD+A V
Sbjct: 597 SACSHSGLVDDATRIFDIMVNIYGFVPSVDHFSCIVDLLGRSGYLDEAERVVTDGYFGAH 656
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIA 475
+ SL AC H N+ + + L+E E NP+ +V+L+NI + G+W++ A+L+
Sbjct: 657 PNMCWSLFSACAVHGNLTLGRKVARLLLEREQNNPSVYVLLANICAEAGQWEEAAKLRDM 716
Query: 476 MRDTGFRKLPGCSVIE 491
++ G K PGCS I
Sbjct: 717 VKQFGTTKQPGCSWIS 732
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 154/359 (42%), Gaps = 48/359 (13%)
Query: 51 NHFTLPIVVRSCSKAGAVRE-GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
+H TL + + SK V G Q+H A K K S + +L+ +Y+ + V
Sbjct: 53 DHCTLSTTITATSKTRHVTVFGNQLHSFAIKTALKAYSHVANSLLSLYAKAHDLVSVELV 112
Query: 110 FGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAR 169
F ++ +V WT ++SA D+ + D P+ V +W+ +I+G ++G A
Sbjct: 113 FDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVWNAIITGCSDNGCEDVAF 172
Query: 170 ELFDKMPNRDV-----------------------------------MSW----NTLLNGY 190
L M +V + W N+L+ Y
Sbjct: 173 RLLKDMFRMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVVKSGFLDWTSVVNSLITMY 232
Query: 191 ANSGDVGSFEKVFEEMPE--RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDF 248
N G V KVFEEM RN ++N +I G+ RF DA F+ M G V ++
Sbjct: 233 FNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDAFLMFRDMH-RGSVCLSEV 291
Query: 249 TLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMFVGNALIDMYAKCGVIESAVDVFNC 307
T V+VL +C +L +G A +G+ G V NA + MY+ G + A VF
Sbjct: 292 TFVSVLSSCC---SLRVGCQAQGLAIKMGFDCGYTAVNNATMTMYSFFGKVNEARSVFEI 348
Query: 308 LDR-RDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR 365
++ RD++SWN M++ DA+ + +M+ +PD T+ +LSA + +V
Sbjct: 349 MEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYGSLLSASDSLQMVE 407
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 35/314 (11%)
Query: 155 VISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSW 214
++S Y ++ D+VS +FD + DV SW T+L+ + D+ VF++MP+ V W
Sbjct: 96 LLSLYAKAHDLVSVELVFDDIQCPDVYSWTTVLSAISRLSDIDYALHVFDKMPKCYVAVW 155
Query: 215 NVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAE 274
N +I G + NG A K M +V +++T +L C LD G+ VH
Sbjct: 156 NAIITGCSDNGCEDVAFRLLKDMF-RMNVRGDNYTFATMLSLCPLSEGLDYGRHVHSVVV 214
Query: 275 SIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLD--RRDIISWNTMINGLAMHGNTADA 332
G+ V N+LI MY CG + VF ++ R+ +++N MI+G DA
Sbjct: 215 KSGFLDWTSVVNSLITMYFNCGCVVDGYKVFEEMEGGVRNHVTYNAMIDGFVSVERFEDA 274
Query: 333 LSLFDQMKNSREQPDGVTFVGILSACTHM-------GL-VRDGF---------------L 369
+F M VTFV +LS+C + GL ++ GF
Sbjct: 275 FLMFRDMHRGSVCLSEVTFVSVLSSCCSLRVGCQAQGLAIKMGFDCGYTAVNNATMTMYS 334
Query: 370 YFQSMVDHYSIIPQIEH------YGCMADLLGRAGLLDQAV-SFV--RKMPMEPDAVIWT 420
+F + + S+ +E + M + + + + A+ +++ R+ +EPDA +
Sbjct: 335 FFGKVNEARSVFEIMEESRDLVSWNVMVSMFFQENINEDAILTYIKMRREGIEPDAFTYG 394
Query: 421 SLLGACRTHKNVEI 434
SLL A + + VE+
Sbjct: 395 SLLSASDSLQMVEM 408
>Medtr2g019350.1 | PPR containing plant-like protein | HC |
chr2:6301271-6304315 | 20130731
Length = 601
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/519 (29%), Positives = 258/519 (49%), Gaps = 74/519 (14%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M +A +F + PN +N M GYS++ S + +F ++ R + L+ F+ V++
Sbjct: 59 MNYASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKL-RNSGNGLDPFSFIAVMK 117
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C ++ V G VH + K G ++ L +++ Y
Sbjct: 118 ACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCV--------------------- 156
Query: 121 WTAMISAYISCGDVGSGRRLLDLAPER-DVVMWSIVISGYIESGDMVSARELFDKMPNRD 179
CG + R++ D PER D+V W+I++ G + D +LF K
Sbjct: 157 ----------CGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDLFLKRGCSG 206
Query: 180 V-MSWNTLLNGYANSGDVGSF--------------------------------------E 200
+ S T L+ + +GD+GSF
Sbjct: 207 IRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAKTGCIYLAR 266
Query: 201 KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRL 260
KVF+ + E++V WN LI YAR+ +A+ + M EG V PN TLV +L S
Sbjct: 267 KVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMRQEG-VKPNSSTLVGLLSVYSAS 325
Query: 261 GALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMI 320
G++ ++V E + ++ +G AL+D+YAKCG ++ A+++F ++ +D+ SW +I
Sbjct: 326 GSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENKDVKSWTAVI 385
Query: 321 NGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSI 380
+G +HG +A+SLF++M+N +P+ +TF+ IL+AC+H GLV +G +F+ MV +
Sbjct: 386 SGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTACSHGGLVTEGVEFFKRMVQEHGF 445
Query: 381 IPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQ 440
P +EHYGC+ DLLGRAG+L +A ++ +P++ DA W +LL ACR H +V++ E
Sbjct: 446 SPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDATSWRTLLSACRVHGDVKLGECVKD 505
Query: 441 HLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDT 479
L +P + +++S Y GR D+ R++ M+ T
Sbjct: 506 VLSNFYTPHPTDSLLISGTYAAAGRISDLTRMQ-EMKQT 543
>Medtr2g015530.1 | pentatricopeptide (PPR) repeat protein | HC |
chr2:4610013-4612058 | 20130731
Length = 520
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 242/465 (52%), Gaps = 47/465 (10%)
Query: 70 EGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI 129
G+++H K GF N+ + L+ +Y S+ A +VF ++ +R + + MI Y+
Sbjct: 55 HGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDDLHDRTLSAYNYMIGGYL 114
Query: 130 SCGDVGS---------------------------------------GR----RLLDLAPE 146
G V GR ++L E
Sbjct: 115 KNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVE 174
Query: 147 RDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEM 206
+D V+ + +I Y+++G + R +FD M ++V+S +L++GY N G E +F +
Sbjct: 175 KDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKT 234
Query: 207 PERNVYSWNVLIGGYARNGRFS-DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDM 265
+++V +N +I GY++ ++ +LE + M + PN T +++ ACS L A ++
Sbjct: 235 LDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDM-QRLNFRPNLSTFASIIGACSVLAAFEI 293
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
G+ V + + +G+ALIDMY+KCG + A VF+ + +++ SW +MI+G
Sbjct: 294 GEQVQAQLMKTPFFAVIKLGSALIDMYSKCGRVIDAQRVFDHMLEKNVFSWTSMIDGYGK 353
Query: 326 HGNTADALSLFDQMKNSRE-QPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
+G +AL LF +M+ P+ VTF+ L+AC H GLV G+ FQSM Y + P++
Sbjct: 354 NGFPDEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRM 413
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIE 444
EHY CM DLLGRAG L+QA FV +MP P++ +W +LL +CR H N+E+A+LA L +
Sbjct: 414 EHYACMVDLLGRAGWLNQAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFK 473
Query: 445 LEP-KNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCS 488
L P +V LSN D G+W +V+ L+ M++ G K CS
Sbjct: 474 LNAYGRPGAYVALSNTLADAGKWDNVSELREVMKEKGISKDTACS 518
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 172/374 (45%), Gaps = 51/374 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+AR+VFD + + + +N M GY + + LF +++ + P + FT +++++
Sbjct: 90 YARQVFDDLHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKP-DGFTFSMILKAS 148
Query: 63 SKA---GAVRE-GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+ G V + G VH K + + LCTALI+ Y G VG VF M E+NV
Sbjct: 149 TNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNV 208
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGY------------------- 159
+ T++IS Y++ G + ++DVV+++ +I GY
Sbjct: 209 ISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRSLEVYIDMQR 268
Query: 160 ----------------------IESGDMVSARELFDKMPNRDVMSWNT-LLNGYANSGDV 196
E G+ V A+ + K P V+ + L++ Y+ G V
Sbjct: 269 LNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLM--KTPFFAVIKLGSALIDMYSKCGRV 326
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
++VF+ M E+NV+SW +I GY +NG +ALE FK+M +E + PN T ++ L A
Sbjct: 327 IDAQRVFDHMLEKNVFSWTSMIDGYGKNGFPDEALELFKKMQIEYSITPNFVTFLSALTA 386
Query: 257 CSRLGALDMGKWVHVYAES-IGYKGNMFVGNALIDMYAKCGVIESAVD-VFNCLDRRDII 314
C+ G ++ G + ES K M ++D+ + G + A + V +R +
Sbjct: 387 CAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLNQAWEFVTRMPERPNSD 446
Query: 315 SWNTMINGLAMHGN 328
W +++ +HGN
Sbjct: 447 VWLALLSSCRIHGN 460
>Medtr7g082550.1 | PPR containing plant-like protein | HC |
chr7:31648795-31646693 | 20130731
Length = 487
Score = 252 bits (643), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 135/330 (40%), Positives = 198/330 (60%), Gaps = 20/330 (6%)
Query: 184 NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEG-D 242
++L++ Y+ G +G +VF+EM RNV SW +I G+A+ R LE F++M G +
Sbjct: 147 SSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRM--RGLE 204
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+ PN FT ++L AC GAL G+ VH +G+ + V NALI MY+KCGVI A+
Sbjct: 205 LKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDAL 264
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+F + +D+++WN+MI G+ + G PD VTF+GILS+C H G
Sbjct: 265 YIFENMVSKDVVTWNSMIVGMRIMG----------------VNPDAVTFLGILSSCRHGG 308
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
LV++G +YF SMVDH + P+++HY C+ DLLGRAGLL +A+ F++ MP+ P+AVIW SL
Sbjct: 309 LVKEGQVYFSSMVDH-GLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSL 367
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFR 482
L + R H NV I A + + LEP + + L+N+Y +G W VAR++ M+D G +
Sbjct: 368 LSSSRLHGNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLMKDKGLK 427
Query: 483 KLPGCSVIECNDSVVEFYSLDERHPETESI 512
PGCS IE + V F S D+ + I
Sbjct: 428 PNPGCSWIEVKNKVHRFESQDKSNSRMNGI 457
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 137/283 (48%), Gaps = 39/283 (13%)
Query: 63 SKAGAVRE---GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
S G+ R+ G Q HC+A + GF N ++ ++LI +YS G +GDAY+VF EM RNVV
Sbjct: 116 SLCGSKRDFYGGIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVV 175
Query: 120 VWTAMISAYIS------CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD 173
WTA+I+ + C ++ R L+L P + ++ ++S + SG + R +
Sbjct: 176 SWTAIIAGFAQEWRVDMCLELFRRMRGLELKP--NYFTYTSLLSACMGSGALGHGRGVHC 233
Query: 174 KMPNRDVMSW----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
++ + N L+ Y+ G + +FE M ++V +WN +I G
Sbjct: 234 QIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVG--------- 284
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESI---GYKGNMFVGN 286
M + G V P+ T + +L +C G + G+ VY S+ G + + +
Sbjct: 285 -------MRIMG-VNPDAVTFLGILSSCRHGGLVKEGQ---VYFSSMVDHGLQPELDHYS 333
Query: 287 ALIDMYAKCGVIESAVD-VFNCLDRRDIISWNTMINGLAMHGN 328
++D+ + G++ A+D + N + + W ++++ +HGN
Sbjct: 334 CIVDLLGRAGLLLEALDFIQNMPVCPNAVIWGSLLSSSRLHGN 376
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 98/204 (48%), Gaps = 23/204 (11%)
Query: 266 GKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAM 325
G H A IG+ N++VG++LI +Y++CG++ A VF+ + R+++SW +I G A
Sbjct: 127 GIQYHCLAIRIGFIANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQ 186
Query: 326 HGNTADALSLFDQMKNSREQPDGVTFVGILSAC-----------THMGLVRDGFLYFQSM 374
L LF +M+ +P+ T+ +LSAC H +++ GF + +
Sbjct: 187 EWRVDMCLELFRRMRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHV 246
Query: 375 VDHYSIIPQIEHYGCMADLL--------GRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ ++I G + D L + + +R M + PDAV + +L +C
Sbjct: 247 EN--ALIAMYSKCGVIVDALYIFENMVSKDVVTWNSMIVGMRIMGVNPDAVTFLGILSSC 304
Query: 427 RTHKNVEIAELAFQHLIE--LEPK 448
R V+ ++ F +++ L+P+
Sbjct: 305 RHGGLVKEGQVYFSSMVDHGLQPE 328
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G A +VFD+M N +W A+ G++ + LF M P N+FT ++
Sbjct: 159 LGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRRMRGLELKP-NYFTYTSLLS 217
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C +GA+ G VHC + GF + ALI MYS G + DA +F M ++VV
Sbjct: 218 ACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDALYIFENMVSKDVVT 277
Query: 121 WTAMI 125
W +MI
Sbjct: 278 WNSMI 282
>Medtr3g063220.1 | PPR containing plant-like protein | HC |
chr3:28610294-28607607 | 20130731
Length = 546
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 246/436 (56%), Gaps = 20/436 (4%)
Query: 58 VVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERN 117
++ +C + GA+ G +H + N + + L+ +Y++ G + DA+ +F +M +R+
Sbjct: 117 LLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKRD 176
Query: 118 VVV--WTAMISAYISCG----DVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMV 166
+ W ++IS Y G + ++++ E D+ + V+ G + G+ V
Sbjct: 177 MYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEEV 236
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
R + D N L++ Y+ GD+ K+F +M R+ SWN ++ GY R+G
Sbjct: 237 H-RHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDSVSWNSMLTGYVRHGL 295
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGN 286
+A+ F+QM+++G+ P+ F++ A+L + S +LD+G +H + G + N+ + N
Sbjct: 296 EVEAINIFRQMVLKGEK-PDYFSISAILTSVS---SLDVGVQIHGWVIRQGVEWNLSIAN 351
Query: 287 ALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQP 346
+LI Y+K G ++ A +FN + RD++SWN++I+ H +A+S F++M+ + E P
Sbjct: 352 SLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISS---HCKHPEAISYFEKMEEAGEVP 408
Query: 347 DGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSF 406
D +TFV +LSAC H+GLV DG F M + Y I P +EHYGCM +L GRAGL+++A S
Sbjct: 409 DKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKPIMEHYGCMVNLYGRAGLVEKAYSI 468
Query: 407 VRKMPMEP-DAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGR 465
+ +M E +W +LL AC H NV I E++ L ELEP N NFV+L IY+ GR
Sbjct: 469 IVRMDSEAVGPTLWGALLYACLLHGNVTIGEISANKLFELEPDNEHNFVLLMKIYEKAGR 528
Query: 466 WQDVARLKIAMRDTGF 481
+D+ R+++ M D G
Sbjct: 529 LEDMERIRMMMVDRGL 544
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 39/352 (11%)
Query: 1 MGHARKVFDKMPEPNTAT--WNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIV 58
M A +FD+M + + WN++ +GY+ + D + L+ +M P + FT P V
Sbjct: 162 MDDAHDLFDQMTKRDMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEP-DIFTFPRV 220
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
++ C G V GE+VH + GF + F+ AL++MYS G + A K+F +M R+
Sbjct: 221 LKVCGGIGLVGVGEEVHRHVVRCGFWDDGFVLNALVDMYSKCGDIVKARKIFNKMHFRDS 280
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
V W +M++ Y+ G L E + +V+ G E D S + + +
Sbjct: 281 VSWNSMLTGYVRHG----------LEVEAINIFRQMVLKG--EKPDYFSISAILTSVSSL 328
Query: 179 DV------------MSW-----NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGY 221
DV + W N+L+ Y+ G + +F MPER+V SWN +I +
Sbjct: 329 DVGVQIHGWVIRQGVEWNLSIANSLIIAYSKHGRLDKARSIFNLMPERDVVSWNSIISSH 388
Query: 222 ARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKG 280
++ +A+ F++M G+ VP+ T V++L AC+ LG ++ G + + E K
Sbjct: 389 CKH---PEAISYFEKMEEAGE-VPDKITFVSLLSACAHLGLVNDGERLFALMCEKYKIKP 444
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDI--ISWNTMINGLAMHGNTA 330
M ++++Y + G++E A + +D + W ++ +HGN
Sbjct: 445 IMEHYGCMVNLYGRAGLVEKAYSIIVRMDSEAVGPTLWGALLYACLLHGNVT 496
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 17/210 (8%)
Query: 252 AVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR 311
++L C R GA+ G W+H N+ + + L+ +YA G ++ A D+F+ + +R
Sbjct: 116 SLLETCYRFGAIHHGIWLHRLIPPALLHRNVGISSKLVRLYASFGYMDDAHDLFDQMTKR 175
Query: 312 DIIS--WNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFL 369
D+ + WN++I+G A G DA++L+ QM +PD TF +L C +GLV G
Sbjct: 176 DMYAFPWNSLISGYAEMGLYDDAIALYFQMVEEGVEPDIFTFPRVLKVCGGIGLVGVGEE 235
Query: 370 YFQSMV------DHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ +V D + + + D+ + G + +A KM D+V W S+L
Sbjct: 236 VHRHVVRCGFWDDGFVL-------NALVDMYSKCGDIVKARKIFNKMHFR-DSVSWNSML 287
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANF 453
H +E+ + + L+ + P F
Sbjct: 288 TGYVRH-GLEVEAINIFRQMVLKGEKPDYF 316
>Medtr4g078750.1 | PPR containing plant-like protein | HC |
chr4:30434764-30433246 | 20130731
Length = 470
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/451 (30%), Positives = 237/451 (52%), Gaps = 30/451 (6%)
Query: 69 REGEQVHCVAAKRGF---------------KW-NSFLCTALIEMYSAKGSVGDAYKVFGE 112
++ +Q+H + G+ KW + LC ALI Y+ + +F
Sbjct: 20 KQMKQIHSLVITNGYLNFQKSNNASFSNHIKWMPTLLCNALIRAYNVHNH-NKVFVIFTN 78
Query: 113 MPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISG----YIESGDMVSA 168
M NV T + L A +R ++ V++ Y + +V A
Sbjct: 79 MLANNVSPNTHTFPPLLKSSSAFVVTPLHCQALKRGILSDPFVLTTLLVVYARTNHIVCA 138
Query: 169 RELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+++F+++P +++ N ++N + +G++ VFE MP R+V SW ++ G+A +G F
Sbjct: 139 QKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALSGNFG 198
Query: 229 DALEAFKQMLVEGDVV-----PNDFTLVAVLLACSRL---GALDMGKWVHVYAESIGYKG 280
A+ F M+ DV+ PN+ T V+VL +C+ L GALD G+ VH Y G
Sbjct: 199 AAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVKGVDL 258
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMK 340
+FVG +LI++Y K G + + VF + R++ +WN MI+ LA +G +AL LF++MK
Sbjct: 259 GVFVGTSLINLYGKMGCLNYSASVFRVMVVREVCTWNAMISSLASNGREKEALDLFEKMK 318
Query: 341 NSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLL 400
+P+ +TFV +L+AC G V +G F+SM + ++P +EHYGC+ DLLGRAG +
Sbjct: 319 LQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLLGRAGHI 378
Query: 401 DQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIY 460
+A +R MP PD + + LGACR H +E+ E +++L+ ++ +++LS++Y
Sbjct: 379 QEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGE-EIAKMLKLQTQHCGQYLLLSSMY 437
Query: 461 KDLGRWQDVARLKIAMRDTGFRKLPGCSVIE 491
+ RW A L+ + + G K+P S++
Sbjct: 438 AEKERWNHAADLRNEIMEAGIHKIPAFSMVH 468
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 151/341 (44%), Gaps = 62/341 (18%)
Query: 16 TATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVH 75
T NA+ Y++ +H V V+F M +P H T P +++S S A V +H
Sbjct: 54 TLLCNALIRAYNV-HNHNKVFVIFTNMLANNVSPNTH-TFPPLLKS-SSAFVVTP---LH 107
Query: 76 CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVG 135
C A KRG + F+ T L+ +Y+ + A KVF E+P +V AMI+A+ G++
Sbjct: 108 CQALKRGILSDPFVLTTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNME 167
Query: 136 SGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKM------------PN------ 177
+ + P RDVV W+ +++G+ SG+ +A F M PN
Sbjct: 168 GALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVS 227
Query: 178 -----------------RDVMSW-------------NTLLNGYANSGDVGSFEKVFEEMP 207
R V + +L+N Y G + VF M
Sbjct: 228 VLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRVMV 287
Query: 208 ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGK 267
R V +WN +I A NGR +AL+ F++M ++G + PN T VAVL AC+R G + G
Sbjct: 288 VREVCTWNAMISSLASNGREKEALDLFEKMKLQG-LKPNSITFVAVLTACARGGFVSEGL 346
Query: 268 WVHVYAESIGYKGN----MFVGNALIDMYAKCGVIESAVDV 304
+ ES+ K M ++D+ + G I+ A ++
Sbjct: 347 ELF---ESMSSKFQVVPVMEHYGCVVDLLGRAGHIQEAAEI 384
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 46/283 (16%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRA-----AAAPLNHFTL 55
M A VF+ MP + +W M NG++L+ + + F M R N T
Sbjct: 166 MEGALLVFEWMPYRDVVSWTTMVNGFALSGNFGAAIRFFGTMMRHKDVLDCLVKPNEATY 225
Query: 56 PIVVRSCSK---AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGE 112
V+ SC++ GA+ G QVH +G F+ T+LI +Y G + + VF
Sbjct: 226 VSVLSSCTELEGKGALDFGRQVHGYIVVKGVDLGVFVGTSLINLYGKMGCLNYSASVFRV 285
Query: 113 MPERNVVVWTAMISAYISCG------DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMV 166
M R V W AMIS+ S G D+ +L L P + + + V++ G +
Sbjct: 286 MVVREVCTWNAMISSLASNGREKEALDLFEKMKLQGLKP--NSITFVAVLTACARGGFVS 343
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGR 226
ELF+ M ++ F+ +P Y V + G R G
Sbjct: 344 EGLELFESMSSK------------------------FQVVPVMEHYGCVVDLLG--RAGH 377
Query: 227 FSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
+A E + M P+ L A L AC GA+++G+ +
Sbjct: 378 IQEAAEIIRNM----PFPPDKTVLGAFLGACRIHGAIELGEEI 416
>Medtr5g018370.1 | PPR containing plant-like protein | HC |
chr5:6845861-6848150 | 20130731
Length = 714
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 259/532 (48%), Gaps = 19/532 (3%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ A VF M E + WN++ GY + V LF EM P +T +++
Sbjct: 165 LSSAESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTP-TVYTFCMILS 223
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+CS+ G +H + L AL++MY G AY +F M + ++V
Sbjct: 224 ACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVS 283
Query: 121 WTAMISAYISCGDVGSGRRLLDLA--------PERDVVMWSIVISGYIESGDMVSARELF 172
W +MIS Y D G + ++L P+ D ++ +IS + L
Sbjct: 284 WNSMISGYFENED---GEKAMNLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLH 340
Query: 173 DKMPN----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
++ R V +TL++ Y + + + +VF +P ++ W +I GY++
Sbjct: 341 GQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGM 400
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
A+ F +M E + +D+ L VL C+ L L G+ +H YA +GY M V +L
Sbjct: 401 GAIRCFSEMHHEVHEI-DDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSL 459
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
IDMYAK G +E+A VF+ + D+ WN+M+ G + HG DAL LF+++ PD
Sbjct: 460 IDMYAKNGNLEAAYLVFSQVSHPDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQ 519
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
VTF+ +LSAC+H LV G L + M ++P +HY CM LL RA LL++A +
Sbjct: 520 VTFLSLLSACSHSRLVEQGKLLWNYM-SSIGLVPGPKHYSCMVTLLSRAALLEEAEEIIN 578
Query: 409 KMPMEPDAV-IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQ 467
K P D V +W +LL AC +KN+++ A + ++ ++ ++LSN+Y GRW
Sbjct: 579 KSPYVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWD 638
Query: 468 DVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
+VA ++ M+ K PG S IE + + F S D+ HP+ + + L L
Sbjct: 639 EVAEIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQSHPKVDQVQAELHRL 690
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 124/484 (25%), Positives = 215/484 (44%), Gaps = 48/484 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVV--LFAEMNRAAAAPLNHFTLPIVVRS 61
A +VFDKMP+ ++NA+ YS V L+ +M P N T+ ++++
Sbjct: 65 AHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSN-MTITSLLQA 123
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
S G + G +H + K GF + + T+L+ MYS+ + A VF +M ER+ V W
Sbjct: 124 ASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAW 183
Query: 122 TAMISAYISCGDVGSGRRL------LDLAPERDVVMWSIVISGYIESGDMVSARELFDKM 175
++I Y+ + G L + P V + +++S D S R + ++
Sbjct: 184 NSLILGYLKNDKIEKGVYLFIEMMWVGFTPT--VYTFCMILSACSRLKDYFSGRLIHARV 241
Query: 176 ----PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
+ D+ N L++ Y N+GD + +F M + ++ SWN +I GY N A+
Sbjct: 242 IVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAM 301
Query: 232 EAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDM 291
F Q+ P+D+T ++ A GK +H G+ ++FVG+ L+ M
Sbjct: 302 NLFVQLKALCFPKPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSM 361
Query: 292 YAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTF 351
Y K E+A+ VF + +D I W MI G + + A+ F +M + + D
Sbjct: 362 YFKNQETEAALRVFCSIPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVL 421
Query: 352 VGILSACTHMGLVRDGFLYF---------------QSMVDHYS----------IIPQIEH 386
G+LS C ++ ++R G + S++D Y+ + Q+ H
Sbjct: 422 SGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVSH 481
Query: 387 --YGCMADLLG---RAGLLDQAVSF---VRKMPMEPDAVIWTSLLGACRTHKNVEIAELA 438
C +LG G++D A+ + K + PD V + SLL AC + VE +L
Sbjct: 482 PDLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVTFLSLLSACSHSRLVEQGKLL 541
Query: 439 FQHL 442
+ ++
Sbjct: 542 WNYM 545
Score = 139 bits (349), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/320 (29%), Positives = 168/320 (52%), Gaps = 19/320 (5%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCV----AAKRGFKWNSFLCTALIEMYSAKGSVGDAYKV 109
T ++++ C +++E Q+H + G K ++FL +I MYS GS+ DA++V
Sbjct: 10 TDTLLLKKCRITTSLQEARQLHALLLTTTNASGSK-SAFLYNNIISMYSRCGSLEDAHQV 68
Query: 110 FGEMPERNVVVWTAMISAY--------ISCGDVGSGRRLLDLAPERDVV---MWSIVISG 158
F +MP+R V + A+++AY + ++ + + L P + + + + G
Sbjct: 69 FDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITSLLQAASLHG 128
Query: 159 YIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLI 218
+ G ++ A+ L N D+ +LLN Y++ D+ S E VF +M ER+ +WN LI
Sbjct: 129 DLLIGLLLHAKSLKFGFLN-DICVQTSLLNMYSSCMDLSSAESVFCDMNERDNVAWNSLI 187
Query: 219 GGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGY 278
GY +N + + F +M+ G P +T +L ACSRL G+ +H
Sbjct: 188 LGYLKNDKIEKGVYLFIEMMWVG-FTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNV 246
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
++ + NAL+DMY G ++A +F+ +++ D++SWN+MI+G + + A++LF Q
Sbjct: 247 SPDLHLQNALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQ 306
Query: 339 MKN-SREQPDGVTFVGILSA 357
+K +PD T+ GI+SA
Sbjct: 307 LKALCFPKPDDYTYAGIISA 326
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYAR--NGRFSDALEAFKQMLVE 240
+N +++ Y+ G + +VF++MP+R S+N L+ Y+R A + QM
Sbjct: 49 YNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENM 108
Query: 241 GDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIES 300
G + P++ T+ ++L A S G L +G +H + G+ ++ V +L++MY+ C + S
Sbjct: 109 G-LRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCMDLSS 167
Query: 301 AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTH 360
A VF ++ RD ++WN++I G + + LF +M P TF ILSAC+
Sbjct: 168 AESVFCDMNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSR 227
Query: 361 MGLVRDGFLYFQSMVDHYSII-----PQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPD 415
+ +D YF + H +I P + + D+ AG A +M + D
Sbjct: 228 L---KD---YFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRME-KWD 280
Query: 416 AVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
V W S++ +++ E A F L L P ++
Sbjct: 281 LVSWNSMISGYFENEDGEKAMNLFVQLKALCFPKPDDYT 319
>Medtr8g063450.1 | PPR containing plant-like protein | HC |
chr8:26602939-26605163 | 20130731
Length = 699
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 257/531 (48%), Gaps = 38/531 (7%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
VF MPE N +WN + GYS D+ ++ T+ ++
Sbjct: 157 VFRYMPECNYVSWNTLIAGYSRV-GDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVR 215
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFG---EMPERNVVVWTA 123
Q+HC K G + + +C A+I YS S+ DA +VF + R++V W +
Sbjct: 216 FYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNS 275
Query: 124 MISAYIS------CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
M++AY+ DV + P D ++ VISG L +
Sbjct: 276 MLAAYLLHKKENLAFDVFIEMQSFGFEP--DDYSYTGVISGCSIKEHKSRGESLHGLVIK 333
Query: 178 R----DVMSWNTLLNGYANSGD--VGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDAL 231
R V N L+ Y + + ++F M ++ +WN ++ GY + GR DAL
Sbjct: 334 RGAEVSVPVSNALIAMYLGFDNRCMEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDAL 393
Query: 232 EAFKQ---MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
F Q + VE D D+T AV+ CS L L +G+ VHV + +G+ N +VG
Sbjct: 394 RLFVQVRSLFVEID----DYTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVG--- 446
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+ A F + I WN++I G A HG AL LF M+ + +PD
Sbjct: 447 ----------KDAKKCFETTSNDNAIIWNSIIFGYAQHGQGNIALELFYLMREKKVKPDH 496
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
+TFV +L+AC+H GLV +G QSM + I ++EHY C DL GRAG L++ + V
Sbjct: 497 ITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGYLEEGKALVE 556
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQD 468
MP EPDA++ +LLGACR+ N+E+A + L+ LEP++ + +V+LS++Y L W +
Sbjct: 557 TMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDLYGRLKMWDE 616
Query: 469 VARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGL 519
A + MR+ G +K+PG S IE + V F + D HP+++ IY L L
Sbjct: 617 KASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELLLQL 667
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/467 (24%), Positives = 209/467 (44%), Gaps = 43/467 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A ++FDKMP+ +T +WNA+ +GY T L M + A NH T ++ +
Sbjct: 53 ALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNH-TFGSTLKGVA 111
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+A + G+Q+H V K N F +AL++MY+ G V DA VF MPE N V W
Sbjct: 112 RAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNT 171
Query: 124 MISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDV--- 180
+I+ Y GD+ L+ V + +S + D V L ++ + V
Sbjct: 172 LIAGYSRVGDLDMAFWLMRCQELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHG 231
Query: 181 -----MSWNTLLNGYANSGDVGSFEKVF---EEMPERNVYSWNVLIGGYARNGRFSDALE 232
+ N ++ Y+ + E+VF + R++ +WN ++ Y + + + A +
Sbjct: 232 LEAFNIVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFD 291
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
F +M G P+D++ V+ CS G+ +H G + ++ V NALI MY
Sbjct: 292 VFIEMQSFG-FEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMY 350
Query: 293 A----KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
+C +E A+ +F +D +D +WN+++ G G + DAL LF Q+++ + D
Sbjct: 351 LGFDNRC--MEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVEIDD 408
Query: 349 VTFVGILSACTHMGLV----------------------RDGFLYFQSMVDHYSIIPQIEH 386
TF ++ C+ + + +D F++ + +II
Sbjct: 409 YTFSAVIRCCSDLATLQLGQQVHVLSLKVGFDTNKYVGKDAKKCFETTSNDNAIIWNSII 468
Query: 387 YGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVE 433
+G G+ + + +R+ ++PD + + ++L AC + VE
Sbjct: 469 FGYAQH--GQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVE 513
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 147/320 (45%), Gaps = 25/320 (7%)
Query: 51 NHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF 110
+H TLP + + HC+A K G + + LI YS + A ++F
Sbjct: 11 SHITLPYL-------------QATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLF 57
Query: 111 GEMPERNVVVWTAMISAYISCGDVGSGRRLLDL----APERDVVMWSIVISGYIESGDMV 166
+MP+R+ V W A+IS Y++ D+ S +LL+ D + + G + +
Sbjct: 58 DKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLE 117
Query: 167 SARELFDKMP----NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYA 222
++L M N +V S + LL+ YA G V VF MPE N SWN LI GY+
Sbjct: 118 LGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYS 177
Query: 223 RNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNM 282
R G A + +EG V +D T+ +L + + +H G +
Sbjct: 178 RVGDLDMAFWLMRCQELEG-VGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFN 236
Query: 283 FVGNALIDMYAKCGVIESAVDVF---NCLDRRDIISWNTMINGLAMHGNTADALSLFDQM 339
V NA+I Y++C ++ A VF + RD+++WN+M+ +H A +F +M
Sbjct: 237 IVCNAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEM 296
Query: 340 KNSREQPDGVTFVGILSACT 359
++ +PD ++ G++S C+
Sbjct: 297 QSFGFEPDDYSYTGVISGCS 316
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D+ + N L+ Y+ + ++F++MP+R+ SWN +I GY + M
Sbjct: 33 DLYTSNNLITAYSKCAQLPLALQLFDKMPQRDTVSWNAVISGYVNTADLDSTWQLLNAMR 92
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
V G N T + L +R L++G+ +H + N+F G+AL+DMYAKCG +
Sbjct: 93 VSGHAFDNH-TFGSTLKGVARAQRLELGQQLHSVMIKMRLNENVFSGSALLDMYAKCGRV 151
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSAC 358
+ A+ VF + + +SWNT+I G + G+ A L M+ + G+ +
Sbjct: 152 DDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWL---MRCQELEGVGIDDGTVSPLL 208
Query: 359 THMGLVRDGFLYFQSMVDHYSIIPQ-IEHYGCMADLLGRA-----GLLDQAVSFVRKMPM 412
T + VR Y M H I+ +E + + + + A L D FV + +
Sbjct: 209 TLLDGVR---FYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSLQDAERVFVGAVTV 265
Query: 413 E-PDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
D V W S+L A HK LAF IE++
Sbjct: 266 TCRDLVTWNSMLAAYLLHKK---ENLAFDVFIEMQ 297
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 109/266 (40%), Gaps = 31/266 (11%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A ++F M + TWN++ GY D + LF ++ R+ ++ +T V+R
Sbjct: 358 MEDALRIFFSMDVKDCCTWNSVLAGYVQVGRSEDALRLFVQV-RSLFVEIDDYTFSAVIR 416
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG-DAYKVFGEMPERNVV 119
CS ++ G+QVH ++ K GF N + VG DA K F N +
Sbjct: 417 CCSDLATLQLGQQVHVLSLKVGFDTNKY--------------VGKDAKKCFETTSNDNAI 462
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAPERDV----VMWSIVISGYIESGDMVSARELFDKM 175
+W ++I Y G L L E+ V + + V++ +G + R++ M
Sbjct: 463 IWNSIIFGYAQHGQGNIALELFYLMREKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSM 522
Query: 176 ------PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMP-ERNVYSWNVLIGGYARNGRFS 228
P R + + ++ Y +G + + + E MP E + L+G G
Sbjct: 523 ESDFGIPLR-MEHYACAVDLYGRAGYLEEGKALVETMPFEPDAMVLRTLLGACRSCGNIE 581
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVL 254
A K +LV + P D + +L
Sbjct: 582 LASHVAKMLLV---LEPEDHSTYVLL 604
>Medtr5g025580.1 | PPR containing plant-like protein | HC |
chr5:10385696-10382561 | 20130731
Length = 767
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 147/498 (29%), Positives = 245/498 (49%), Gaps = 16/498 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F + + +WNAM +GYS + + LF E+ + T+ ++ SC+
Sbjct: 272 AELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKEL-LCCGQNCSSSTVFAILSSCN 330
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE-RNVVVWT 122
A ++ G+ VH K GF ++ L +L++MY G + + + E ++ W
Sbjct: 331 SANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSIADIASWN 390
Query: 123 AMISAYISCGDVGSGRRLLDLAPE-----RDVVMWSIVISGYIESGDMVSARELFD---K 174
+I + L + D + V+S + + L K
Sbjct: 391 TIIVGCVRGDQFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALK 450
Query: 175 MP-NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
P D N+L+ Y D+ S KVF+ N+ +WN +I + N +ALE
Sbjct: 451 SPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALEL 510
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F+ + + PN+FT+V+VL AC+R+G L GK VH Y GY+ N F+ AL+D+Y+
Sbjct: 511 FRHLQFK----PNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYS 566
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
CG +++AV VF ++ +WN+MI HGN A+ LF +M + + TFV
Sbjct: 567 TCGRLDNAVKVFR-HSQKSESAWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVS 625
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+LSAC+H GLV G Y++ M++ Y I P+ EH + ++L R+G +D+A F + +
Sbjct: 626 LLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQSN 685
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
+ +W LL C H +E+ + + L E+EP+N ++ L+N+Y G W+D L+
Sbjct: 686 ASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATDLR 745
Query: 474 IAMRDTGFRKLPGCSVIE 491
+ D G RK G S+I+
Sbjct: 746 QYIHDQGLRKCAGYSLID 763
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 136/476 (28%), Positives = 205/476 (43%), Gaps = 41/476 (8%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VF +M + +WNAM GY+ E+ + L EM + TL ++ C+
Sbjct: 169 AETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCA 228
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSF-LCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ REG +H A +R + L LI+MYS V A +F + ++V W
Sbjct: 229 ELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWN 288
Query: 123 AMISAY----------------ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMV 166
AMIS Y + CG S + ++ S + + G V
Sbjct: 289 AMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVF-------AILSSCNSANSLNFGKSV 341
Query: 167 SARELFDKMPNRDVMSWNTLLNGYANSGDVGS-FEKVFEEMPERNVYSWNVLIGGYARNG 225
+L N ++ N+L+ Y NSGD+ S F + E ++ SWN +I G R
Sbjct: 342 HIWQLKSGFLNHTLLV-NSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGD 400
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVG 285
+F +ALE F M + TLV VL A + + L+ GK +H A + + V
Sbjct: 401 QFQEALETFMLMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQ 460
Query: 286 NALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
N+LI MY +C I SA VF ++ +WN MI+ L+ + + +AL LF ++ +
Sbjct: 461 NSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQ---FK 517
Query: 346 PDGVTFVGILSACTHMGLVRDGF----LYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLD 401
P+ T V +LSACT +G++ G F+ S I + DL G LD
Sbjct: 518 PNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFIS-----AALVDLYSTCGRLD 572
Query: 402 QAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPK-NPANFVML 456
AV R A W S++ A H N E A F + +L K + FV L
Sbjct: 573 NAVKVFRHSQKSESA--WNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTFVSL 626
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 184/399 (46%), Gaps = 40/399 (10%)
Query: 54 TLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSV--GDAYKVFG 111
TL +VV + S +G +HCV+ K G + LC ALI MY+ G V D+ +F
Sbjct: 12 TLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFE 71
Query: 112 EMPERNVVVWTAMISAYISCGDVGSGR---RLLDLAPER-DVVMWSIVIS-----GYIES 162
EM ++VV W +++ + GD+ R ++ + ER D V S IS G +
Sbjct: 72 EMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAF 131
Query: 163 GDMVSARELFDKMPNRD---VMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIG 219
G+ + + + K+ +D V N+L++ Y+ V E VF EM +++ SWN ++
Sbjct: 132 GECIHGQGI--KLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMME 189
Query: 220 GYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYA-ESIGY 278
GYA N +A + +M G P+ TL +L C+ L G+ +H YA
Sbjct: 190 GYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMV 249
Query: 279 KGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQ 338
++ + N LIDMY+KC V+E A +F+ + D++SWN MI+G + + A +LF +
Sbjct: 250 PDHLPLRNGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKE 309
Query: 339 MKNSREQPDGVTFVGILSACT-----------HMGLVRDGFLYFQSMVDHYSIIPQIEHY 387
+ + T ILS+C H+ ++ GFL +V+
Sbjct: 310 LLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNS---------- 359
Query: 388 GCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ + +G L S +++ D W +++ C
Sbjct: 360 --LMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGC 396
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/477 (25%), Positives = 198/477 (41%), Gaps = 72/477 (15%)
Query: 7 VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAG 66
+F++M + +WN++ G + F MN + +H +L + +CS G
Sbjct: 69 LFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERA-DHVSLSCAISACSSLG 127
Query: 67 AVREGEQVHCVAAKRGFKWNSFLCTA--LIEMYSAKGSVGDAYKVFGEMPERNVVVWTAM 124
+ GE +H K G+K NSF+ A LI +YS +V A VF EM +++V W AM
Sbjct: 128 ELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAM 187
Query: 125 ISAYIS------------------C--GDVGSGRRLLDLAPERDVVMWSIVISGYIESGD 164
+ Y S C D+ + +L L E + I GY
Sbjct: 188 MEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRH 247
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
MV D +P R N L++ Y+ V E +F + ++ SWN +I GY++N
Sbjct: 248 MVP-----DHLPLR-----NGLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQN 297
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
+ A FK++L G + T+ A+L +C+ +L+ GK VH++ G+ + +
Sbjct: 298 KYYEKAQNLFKELLCCGQNCSSS-TVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLL 356
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDR-RDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
N+L+ MY G + S + DI SWNT+I G +AL F M R
Sbjct: 357 VNSLMQMYINSGDLTSGFSILQENSSIADIASWNTIIVGCVRGDQFQEALETFMLM---R 413
Query: 344 EQP----DGVTFVGILSACTHMGLVRDG----FLYFQS--------------MVDH---- 377
+ P D +T V +LSA ++ L+ G L +S M D
Sbjct: 414 QGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDI 473
Query: 378 --------YSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGAC 426
+ I + + CM L +A+ R + +P+ S+L AC
Sbjct: 474 NSARKVFKFHSISNLCTWNCMISALSHNKESREALELFRHLQFKPNEFTIVSVLSAC 530
>Medtr3g098230.1 | PPR containing plant-like protein | HC |
chr3:44828973-44831769 | 20130731
Length = 873
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 151/563 (26%), Positives = 276/563 (49%), Gaps = 52/563 (9%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A +F M + +WN + GY+L + +F + L+ T+ ++ +C+
Sbjct: 306 AESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACA 365
Query: 64 KAGAVREGEQVHCVAAKRGFKW-NSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ ++ G+QVH + F + ++ AL+ Y+ G + +AY F + ++++ W
Sbjct: 366 QLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWN 425
Query: 123 AMISAYISCGDVGSGRRLL---------DLAPERDVVM--------------------WS 153
+++ A+ G+ R L D+ P+ ++ +S
Sbjct: 426 SILDAF---GEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYS 482
Query: 154 I----------------VISGYIESGDMVSARELFDKMP-NRDVMSWNTLLNGYANSGDV 196
I ++ Y + G++ A ++F + R++++ N+L++GY G
Sbjct: 483 IRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSH 542
Query: 197 GSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLA 256
+F M E ++ +WN+++ YA N ALE F ++ +G + P+ T+++++
Sbjct: 543 YDANMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQG-MKPDVVTIMSLIPV 601
Query: 257 CSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISW 316
C+++ ++ + + H Y ++ ++ + L+D YAKCG+I A +F +D++ +
Sbjct: 602 CTQMASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMF 660
Query: 317 NTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDGFLYFQSMVD 376
MI G AMHG + AL F M N +PD V F ILSAC+H G + +G F S+
Sbjct: 661 TAMIGGYAMHGMSEKALETFSHMLNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEK 720
Query: 377 HYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAE 436
+ + P IE + C+ DLL R G + +A SFV K+P+E +A IW +LLGAC+T+ VE+
Sbjct: 721 IHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGR 780
Query: 437 LAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSV 496
+ L ++E + N+++LSN+Y RW V ++ MR+ +K GCS IE +
Sbjct: 781 IVADKLFKIEANDIGNYIVLSNLYAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTN 840
Query: 497 VEFYSLDERHPETESIYRALRGL 519
F D HP+ IY L L
Sbjct: 841 NIFVVGDCSHPQRNLIYSTLCTL 863
Score = 167 bits (423), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 112/382 (29%), Positives = 184/382 (48%), Gaps = 27/382 (7%)
Query: 5 RKVFDKMPEPNTATWNAMFNGYSLT-ESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
K+FD+ + WN + +GYS + ++ DV+ +F M+ + + T+ V+ C+
Sbjct: 98 HKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCA 157
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG-DAYKVFGEMPERNVVVWT 122
++G + G+ VH K GF+ ++F AL+ MY+ G V DAY VF + ++VV W
Sbjct: 158 RSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWN 217
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFD--------K 174
AMI+ G + L L +M V Y +++ FD +
Sbjct: 218 AMIAGLAENGLLKEAFSLFSL------MMKGSVKPNYATVANILPVCASFDENIAHRCGR 271
Query: 175 MPNRDVMSW----------NTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
+ V+ W N LL+ Y G E +F M R++ SWN +I GYA N
Sbjct: 272 QIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALN 331
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYK-GNMF 283
G + +L F ++ ++ + T+V++L AC++L L GK VH Y + +
Sbjct: 332 GEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTS 391
Query: 284 VGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
GNAL+ YAKCG IE A F+ + R+D+ISWN++++ + + LSL M
Sbjct: 392 AGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLD 451
Query: 344 EQPDGVTFVGILSACTHMGLVR 365
+PD VT + I+ C + V+
Sbjct: 452 IRPDSVTILTIIHFCASLLRVK 473
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 190/432 (43%), Gaps = 19/432 (4%)
Query: 11 MPEPNTATWNAMFNGYSLTESHRDVVVLFAE-MNRAAAAPLNHFTLPIVVRSCSKAGAVR 69
M + N TW + + H + + F + +AA +H L +++SCS A
Sbjct: 1 MLQRNFMTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASN 60
Query: 70 EGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYI 129
G+ +H K+G AL+ MY+ G + D +K+F + + V+W ++S Y
Sbjct: 61 LGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYS 120
Query: 130 SCG--DVGSGRRLLDLAPERDVVMWSIVISGYI----ESGDMVSARELFDKMPNR----D 179
G D + + +V+ S+ I+ + SG++ + + + D
Sbjct: 121 RSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMD 180
Query: 180 VMSWNTLLNGYANSGDVGS-FEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
+ N L++ YA G V VF+ + ++V SWN +I G A NG +A F M+
Sbjct: 181 TFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMM 240
Query: 239 VEGDVVPNDFTLVAVLLACSRLG---ALDMGKWVHVYA-ESIGYKGNMFVGNALIDMYAK 294
+G V PN T+ +L C+ A G+ +H Y + ++ V NAL+ Y K
Sbjct: 241 -KGSVKPNYATVANILPVCASFDENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLK 299
Query: 295 CGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKN-SREQPDGVTFVG 353
G + A +F +D RD++SWNT+I G A++G +L +F + + D VT V
Sbjct: 300 VGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVS 359
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
IL AC + ++ G ++ H + + + G +++A M
Sbjct: 360 ILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYH-TFSMISR 418
Query: 414 PDAVIWTSLLGA 425
D + W S+L A
Sbjct: 419 KDLISWNSILDA 430
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 212/503 (42%), Gaps = 72/503 (14%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A VFD + + +WNAM G + ++ LF+ M + + P N+ T+ ++ C+
Sbjct: 201 AYAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKP-NYATVANILPVCA 259
Query: 64 KAG---AVREGEQVHCVAAKRGFKWNSF-----LCTALIEMYSAKGSVGDAYKVFGEMPE 115
A R G Q+H +W +C AL+ Y G +A +F M
Sbjct: 260 SFDENIAHRCGRQIHSYV----LQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDA 315
Query: 116 RNVVVWTAMISAYISCGD------VGSGRRLLDLAPERDVVMWSIVIS----GYIESGDM 165
R++V W +I+ Y G+ V L++ V M SI+ + +++G
Sbjct: 316 RDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQ 375
Query: 166 VSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNG 225
V A L D + N L++ YA G + F + +++ SWN ++ +
Sbjct: 376 VHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKR 435
Query: 226 RFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVY---AESIGYKGNM 282
S L ML + D+ P+ T++ ++ C+ L + K +H Y + S+
Sbjct: 436 HHSRFLSLLHVML-KLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAP 494
Query: 283 FVGNALIDMYAKCGVIESAVDVF-NCLDRRDIISWNTMINGLAMHGNTAD---------- 331
VGNA++D Y+KCG IE A +F N ++R++++ N++I+G G+ D
Sbjct: 495 TVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSE 554
Query: 332 ---------------------ALSLFDQMKNSREQPDGVTFVGILSACTHMGLVR----- 365
AL LF +++ +PD VT + ++ CT M V
Sbjct: 555 TDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQC 614
Query: 366 DGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLLGA 425
G++ S D + G + D + G++ A + ++ D V++T+++G
Sbjct: 615 HGYIIRSSFED-------LHLKGTLLDAYAKCGIIGYAYKIFQS-SVDKDLVMFTAMIGG 666
Query: 426 CRTHKNVEIAELAFQHLIELEPK 448
H E A F H++ + K
Sbjct: 667 YAMHGMSEKALETFSHMLNMGIK 689
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 123/280 (43%), Gaps = 22/280 (7%)
Query: 3 HARKVFDKMPEP-NTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRS 61
+A K+F + E N T N++ +GY SH D ++F+ M+ N ++VR
Sbjct: 512 YANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWN-----LMVRV 566
Query: 62 CSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPE---RNV 118
++ + ++ +G K + +LI + + SV + G + ++
Sbjct: 567 YAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFEDL 626
Query: 119 VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR 178
+ ++ AY CG +G ++ + ++D+VM++ +I GY G A E F M N
Sbjct: 627 HLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNM 686
Query: 179 ----DVMSWNTLLNGYANSGDVGSFEKVFEEMP-----ERNVYSWNVLIGGYARNGRFSD 229
D + + ++L+ +++G + K+F+ + + + + ++ AR G S+
Sbjct: 687 GIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSE 746
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWV 269
A ++ +E N +L AC +++G+ V
Sbjct: 747 AYSFVTKIPIEA----NANIWGTLLGACKTYHEVELGRIV 782
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 3/144 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+G+A K+F + + + AM GY++ + F+ M P +H ++
Sbjct: 642 IGYAYKIFQSSVDKDLVMFTAMIGGYAMHGMSEKALETFSHMLNMGIKP-DHVIFTSILS 700
Query: 61 SCSKAGAVREGEQVH-CVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMP-ERNV 118
+CS AG + EG ++ + G K ++++ + G V +AY ++P E N
Sbjct: 701 ACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGHVSEAYSFVTKIPIEANA 760
Query: 119 VVWTAMISAYISCGDVGSGRRLLD 142
+W ++ A + +V GR + D
Sbjct: 761 NIWGTLLGACKTYHEVELGRIVAD 784
>Medtr8g096030.1 | PPR containing plant-like protein | HC |
chr8:40057307-40055314 | 20130731
Length = 494
Score = 249 bits (635), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 140/493 (28%), Positives = 254/493 (51%), Gaps = 65/493 (13%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
+A +F+ +P P T T+N + ++L S + +F + R L+ T P+++++
Sbjct: 65 YALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLT-LDFHTFPLILKAS 123
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
S Q+H ++ + F L++ + V
Sbjct: 124 S---------QLHSLSLAQSLHSQVFKYGFLVDSF----------------------VMN 152
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNRDVMS 182
++I Y S D R+ D A ++F + RD++S
Sbjct: 153 SLIRVY-SVND-----RVND-------------------------AYKVFCESGYRDIVS 181
Query: 183 WNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
+N +++G+ + + ++F+EMP+RN +W +I GY++ +A+E F +M + +
Sbjct: 182 YNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEM-IGLE 240
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
+P++ LV+VL AC++LG L+ G++VH Y G + + ++ L+D+YAKCG +E A
Sbjct: 241 FIPDNIALVSVLSACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIAR 300
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMG 362
+ F +D+ +WN M+ G A+HG L F +M +PDGVTF+G+L C+H G
Sbjct: 301 ETFESCTNKDVFTWNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAG 360
Query: 363 LVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSL 422
LV + F M Y + + +HYGCMAD+L RAGL++++ ++ MP D W L
Sbjct: 361 LVCEARKVFDEMETVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGL 420
Query: 423 LGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAM-RDTGF 481
LG CR H NVEIA+ A Q ++E++P++ + +++NIY + +W D+ +++ ++ +
Sbjct: 421 LGGCRIHGNVEIAKQAAQQVMEIKPEDGGVYSVMANIYANTEQWDDLVKIRKSLGANRRA 480
Query: 482 RKLPGCSVIECND 494
+K+ G S+I N+
Sbjct: 481 KKITGTSLIRLNE 493
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 14/264 (5%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
+ AR++FD+MP+ N TW M GYS + R+ V LF EM P ++ L V+
Sbjct: 195 LDRARELFDEMPQRNEVTWGTMIAGYSQAKLCREAVELFNEMIGLEFIP-DNIALVSVLS 253
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVV 120
+C++ G + +G VH + G + +S+L T L+++Y+ G V A + F ++V
Sbjct: 254 ACAQLGELEQGRFVHDYITRNGIRVDSYLTTGLVDLYAKCGCVEIARETFESCTNKDVFT 313
Query: 121 WTAMISAYISCGD----VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMP 176
W AM+ + G + R++ + D V + V+ G +G + AR++FD+M
Sbjct: 314 WNAMLVGFAIHGQGLVLLEYFSRMVGEGIKPDGVTFLGVLVGCSHAGLVCEARKVFDEME 373
Query: 177 N-----RDVMSWNTLLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDA 230
R+ + + + A +G + ++ + MP +V++W L+GG +G A
Sbjct: 374 TVYGVAREGKHYGCMADMLARAGLIEESRELIKGMPNGGDVFAWGGLLGGCRIHGNVEIA 433
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVL 254
+A +Q++ ++ P D + +V+
Sbjct: 434 KQAAQQVM---EIKPEDGGVYSVM 454
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 156 ISGYIESGDMVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPE----RNV 211
I Y S A LF+ +PN ++NTL+ + S K+F + +
Sbjct: 54 IKTYSNSFLTTYALSLFNSIPNPTTFTFNTLIRIHTLLSSPLSALKIFLSLRRLFLTLDF 113
Query: 212 YSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALD--MGKWV 269
+++ +++ ++ S A Q+ G +V + F + +++ R+ +++ +
Sbjct: 114 HTFPLILKASSQLHSLSLAQSLHSQVFKYGFLV-DSFVMNSLI----RVYSVNDRVNDAY 168
Query: 270 HVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNT 329
V+ ES GY+ ++ N +ID + K ++ A ++F+ + +R+ ++W TMI G +
Sbjct: 169 KVFCES-GYR-DIVSYNVMIDGFVKNFKLDRARELFDEMPQRNEVTWGTMIAGYSQAKLC 226
Query: 330 ADALSLFDQMKNSREQPDGVTFVGILSACTHMGLVRDG 367
+A+ LF++M PD + V +LSAC +G + G
Sbjct: 227 REAVELFNEMIGLEFIPDNIALVSVLSACAQLGELEQG 264
>Medtr5g094220.1 | PPR containing plant-like protein | HC |
chr5:41149037-41146758 | 20130731
Length = 759
Score = 246 bits (628), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 249/485 (51%), Gaps = 17/485 (3%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A + F ++ + +W +M Y+ D V F EM P + + ++
Sbjct: 269 AYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCP-DGMVIGCILSGFG 327
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
+ V G+ H + +R + + + +L+ MY G + A ++F + + ++ W
Sbjct: 328 NSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLF-QRSQGSIEYWNF 386
Query: 124 MISAY------ISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSAREL----FD 173
MI Y + C + + L + E ++ +I G + G++ R +
Sbjct: 387 MIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQL--GEINLGRSIHCNVIK 444
Query: 174 KMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ + N+L+ Y + ++F ER+V WN LI + + +A+
Sbjct: 445 GFVDETISVTNSLIEMYGKCDKMNVSWRIFNR-SERDVILWNALISAHIHVKHYEEAISL 503
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
F M++E D PN TLV VL ACS L L+ G+ +H Y G+K N+ +G AL+DMYA
Sbjct: 504 FDIMIME-DQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYA 562
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
KCG +E + +VF+ + +D+I WN MI+G M+G A+ +F+ M+ S +P+ +TF+
Sbjct: 563 KCGQLEKSREVFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLS 622
Query: 354 ILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPME 413
+LSAC H GLV +G F M YS+ P ++HY CM DLLGR+ L++A V MP+
Sbjct: 623 LLSACAHAGLVEEGKNVFAKM-QSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLSMPIP 681
Query: 414 PDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLK 473
PD +W +LL AC+TH +E+ ++ I+ EP+N ++M++N+Y +GRW + ++
Sbjct: 682 PDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEAENVR 741
Query: 474 IAMRD 478
M+D
Sbjct: 742 RTMKD 746
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 210/469 (44%), Gaps = 20/469 (4%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAA--AAPLNHFTLPIV 58
M A KVFD++P + W A+ GY + +EM R + N TL
Sbjct: 162 MNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGG 221
Query: 59 VRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNV 118
+C G + G +H + K G + ++++ MY G +AY+ F E+ +++
Sbjct: 222 FLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDL 281
Query: 119 VVWTAMISAYISCGDVGSGRRLL------DLAPERDVVMWSIVISGYIESGDMVSARELF 172
+ WT+MI Y G + R + P+ V+ ++SG+ S D+ +
Sbjct: 282 LSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVI--GCILSGFGNSVDVYGGKAFH 339
Query: 173 DKMPNR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFS 228
+ R D M N+LL+ Y G + E++F+ + ++ WN +I GY R G+
Sbjct: 340 GLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNV 398
Query: 229 DALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNAL 288
++ F++M G + +V+ + +C +LG +++G+ +H + V N+L
Sbjct: 399 KCIQLFREMQYLG-IRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSL 457
Query: 289 IDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
I+MY KC + + +FN RD+I WN +I+ + +A+SLFD M + P+
Sbjct: 458 IEMYGKCDKMNVSWRIFN-RSERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNT 516
Query: 349 VTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVR 408
T V +LSAC+H+ + G ++ + + D+ + G L+++
Sbjct: 517 ATLVVVLSACSHLAFLEKG-ERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFD 575
Query: 409 KMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLS 457
M ME D + W +++ + E A F +L+E P LS
Sbjct: 576 SM-MEKDVICWNAMISGYGMNGYAESAIEIF-NLMEESNVKPNEITFLS 622
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 217/501 (43%), Gaps = 30/501 (5%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
+ +F +P +T WN+ + + ++ M P NHFT P+V S +
Sbjct: 63 SSTLFHSLPFKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLP-NHFTFPMVASSYA 121
Query: 64 KAGAVREGEQVHCVAAKRG-FKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+R G +H +A K G F NS + ++ + +YS + DA KVF E+P R+VV WT
Sbjct: 122 HFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWT 181
Query: 123 AMISAYISCGDVGSGRRLL---------DLAPERDVVMWSIVISGYIESGDMVSARELFD 173
A++ Y+ G+ G + P + + G + GD+VS R L
Sbjct: 182 ALVIGYVQNGESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNL--GDLVSGRCLHG 239
Query: 174 KMPNR------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRF 227
+ D+ S ++L+ Y G + F E+ +++ SW +I YAR G
Sbjct: 240 LVVKNGIGCLLDIQS--SVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMM 297
Query: 228 SDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNA 287
SD + F +ML E V P+ + +L + GK H Y + V N+
Sbjct: 298 SDCVRFFWEML-ENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNS 356
Query: 288 LIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPD 347
L+ MY K G++ A +F + I WN MI G G + LF +M+ + +
Sbjct: 357 LLSMYCKFGMLSFAERLFQ-RSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSE 415
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
V V +++C +G + G +++ + + I + ++ G+ ++ +
Sbjct: 416 SVGIVSAIASCGQLGEINLGRSIHCNVIKGF-VDETISVTNSLIEMYGKCDKMNVSWRIF 474
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNP--ANFVMLSNIYKDLGR 465
+ E D ++W +L+ A K+ E A F +I +E +NP A V++ + L
Sbjct: 475 NR--SERDVILWNALISAHIHVKHYEEAISLFDIMI-MEDQNPNTATLVVVLSACSHLAF 531
Query: 466 WQDVARLKIAMRDTGFR-KLP 485
+ RL + + GF+ LP
Sbjct: 532 LEKGERLHRYINEKGFKLNLP 552
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 127/294 (43%), Gaps = 11/294 (3%)
Query: 75 HCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDV 134
H V G N F+ LI +Y + +F +P ++ +W + + S
Sbjct: 32 HAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLPFKDTFLWNSFLKTLFSRSLY 91
Query: 135 GSGRRLLDLAPERDVV----MWSIVISGY-----IESGDMVSARELFDKMPNRDVMSWNT 185
L +V+ + +V S Y I SG + A + ++
Sbjct: 92 PQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSS 151
Query: 186 LLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD--V 243
++ Y+ ++ KVF+E+P R+V +W L+ GY +NG LE +M GD
Sbjct: 152 FVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNGESEMGLECISEMYRVGDDSQ 211
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN TL LAC LG L G+ +H G + + ++++ MY KCGV A
Sbjct: 212 KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQ 271
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSA 357
F+ + +D++SW +MI A G +D + F +M ++ PDG+ ILS
Sbjct: 272 SFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPDGMVIGCILSG 325
>Medtr7g033400.1 | PPR containing protein | HC |
chr7:12012362-12010888 | 20130731
Length = 486
Score = 245 bits (625), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 196/313 (62%), Gaps = 2/313 (0%)
Query: 179 DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML 238
D N L+ GY+ SGD+ VF+E+P +N+ W +I GYA+N +++AL+ F++M+
Sbjct: 173 DCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMV 232
Query: 239 VEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVI 298
V G PN TL +VL C+R G L++G+ +H + G + + +G AL+ MYAK G I
Sbjct: 233 VVG-FEPNGATLASVLSVCARSGCLELGERIHEFMRVKGVEVGVILGTALVYMYAKNGDI 291
Query: 299 ESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSR-EQPDGVTFVGILSA 357
+A +F+ + R++++WN MI GLA HG+ DAL LF+ MK P+ VTFVG+LSA
Sbjct: 292 LTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGLFECMKEEEIVVPNAVTFVGVLSA 351
Query: 358 CTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAV 417
C H GL+ G F SM + I P IEHYGCM DLLGR G L +A ++ MP +PD V
Sbjct: 352 CCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCMVDLLGRGGKLLEAEEVIKGMPWKPDVV 411
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
I +LL A + + N E+AE + ++ L+P N V LSN+Y + G+WQ+V+RL+ M+
Sbjct: 412 ILGALLAASKNNGNTEVAERVVKQILTLDPHNHGVHVSLSNMYAEAGQWQEVSRLRKMMK 471
Query: 478 DTGFRKLPGCSVI 490
+ +K PG S++
Sbjct: 472 EEKLKKAPGWSLV 484
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 172/364 (47%), Gaps = 25/364 (6%)
Query: 3 HARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC 62
HA ++F + +PN+ WN + + + H + L+ +M R P H T P ++++C
Sbjct: 91 HASRIFSSLHKPNSFMWNTLIRAHQQQQPHISLS-LYIQMRRHGVIPGKH-TFPFLLKAC 148
Query: 63 SK-AGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVW 121
S + + +QVH K G ++ + L+ YS G + DA VF E+P +N+ +W
Sbjct: 149 SSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVSGDLVDARYVFDEIPMKNLSLW 208
Query: 122 TAMISAYIS--CGD--VGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN 177
T MI Y C + + R++ + E + + V+S SG + + + M
Sbjct: 209 TTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVLSVCARSGCLELGERIHEFMRV 268
Query: 178 RDV----MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEA 233
+ V + L+ YA +GD+ + K+F+EMPERNV +WN +I G A +G DAL
Sbjct: 269 KGVEVGVILGTALVYMYAKNGDILTARKLFDEMPERNVVTWNAMICGLASHGHVEDALGL 328
Query: 234 FKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-------KWVHVYAESIGYKGNMFVGN 286
F+ M E VVPN T V VL AC G +D+G K VH +I + G M
Sbjct: 329 FECMKEEEIVVPNAVTFVGVLSACCHAGLIDVGREVFCSMKVVHGIEPTIEHYGCM---- 384
Query: 287 ALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ 345
+D+ + G + A +V + + D++ ++ +GNT A + Q+
Sbjct: 385 --VDLLGRGGKLLEAEEVIKGMPWKPDVVILGALLAASKNNGNTEVAERVVKQILTLDPH 442
Query: 346 PDGV 349
GV
Sbjct: 443 NHGV 446
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 126/279 (45%), Gaps = 23/279 (8%)
Query: 179 DVMSWNTLLNGYANS--GDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
D + + L + +A S G++ ++F + + N + WN LI + + + +L + Q
Sbjct: 70 DQFATSRLFSSFALSPFGNLEHASRIFSSLHKPNSFMWNTLIRAHQQQ-QPHISLSLYIQ 128
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLG-ALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKC 295
M G V+P T +L ACS L L K VH + G + VGN L+ Y+
Sbjct: 129 MRRHG-VIPGKHTFPFLLKACSSLSNVLPHCKQVHAHVVKFGLCFDCHVGNGLVRGYSVS 187
Query: 296 GVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGIL 355
G + A VF+ + +++ W TMI G A + +AL LF++M +P+G T +L
Sbjct: 188 GDLVDARYVFDEIPMKNLSLWTTMICGYAQNCCYNEALDLFERMVVVGFEPNGATLASVL 247
Query: 356 SACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRA--------GLLDQAVSFV 407
S C R G L + + + +E + +LG A G + A
Sbjct: 248 SVCA-----RSGCLELGERIHEFMRVKGVE----VGVILGTALVYMYAKNGDILTARKLF 298
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELE 446
+MP E + V W +++ +H +VE A F+ + E E
Sbjct: 299 DEMP-ERNVVTWNAMICGLASHGHVEDALGLFECMKEEE 336
>Medtr8g479320.2 | PPR containing plant-like protein | HC |
chr8:33809079-33805443 | 20130731
Length = 498
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 251/486 (51%), Gaps = 18/486 (3%)
Query: 17 ATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHC 76
A N +S + S + + MN P + L + SC+K G Q+H
Sbjct: 12 ACKNVYIRKHSKSASTCQALESLSRMNGLIEKP-TKYVLCNALSSCAKTLNWHLGIQIHA 70
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
+ G++ N FLC+AL++ Y+ ++ DA K+F M + + V WT++I+ + +
Sbjct: 71 YMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSA---NKQ 127
Query: 137 GRRLLDLAPE--------RDVVMWSIVISGYIESGDMVSARELFDKMPNR--DVMSW--N 184
GR L L E + S++ + ++G + L + + D S+ +
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVIS 187
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
+L++ YAN G + +F E E++ +N +I GY +N DAL+ F +M E ++
Sbjct: 188 SLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMR-EKNMS 246
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
P D TL ++L ACS L L G+ VH +G + N++V + LIDMY+K G I+ A V
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCV 306
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGVTFVGILSACTHMGL 363
+ +++ + W +MI G A G +AL LFD + +E PD V F +L+AC H G
Sbjct: 307 LDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGF 366
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ G YF M+ +Y + P I+ Y C+ DL R G L +A + +MP +P+ +IW+S L
Sbjct: 367 IDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFL 426
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
AC+ + +VE+ A LI++EP N A ++ L++IY G W + + ++ M+ RK
Sbjct: 427 SACKIYGDVELGREAAIQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRK 486
Query: 484 LPGCSV 489
PG S+
Sbjct: 487 PPGWSM 492
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 172/338 (50%), Gaps = 16/338 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC- 62
A K+F M + + +W ++ G+S + RD ++LF EM P N FTL V+ +C
Sbjct: 100 ANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRP-NCFTLTSVINACV 158
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G + +H K+GF +SF+ ++L++ Y+ G + DA +F E E++ V++
Sbjct: 159 GQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYN 218
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVM------WSIVISGYIESGDMVSARE---LFD 173
MIS Y C ++ S L R+ M S ++S ++ R+ L
Sbjct: 219 TMISGY--CQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVI 276
Query: 174 KM-PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
KM R+V +TL++ Y+ GD+ + V ++ ++N W +I GYA+ GR +ALE
Sbjct: 277 KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALE 336
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
F +L + +++P+ AVL AC+ G +D G ++ + + G ++ + LID+
Sbjct: 337 LFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDL 396
Query: 292 YAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
YA+ G + A D+ + + I W++ ++ ++G+
Sbjct: 397 YARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGD 434
>Medtr8g479320.1 | PPR containing plant-like protein | HC |
chr8:33809124-33805421 | 20130731
Length = 498
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/486 (31%), Positives = 251/486 (51%), Gaps = 18/486 (3%)
Query: 17 ATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGEQVHC 76
A N +S + S + + MN P + L + SC+K G Q+H
Sbjct: 12 ACKNVYIRKHSKSASTCQALESLSRMNGLIEKP-TKYVLCNALSSCAKTLNWHLGIQIHA 70
Query: 77 VAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCGDVGS 136
+ G++ N FLC+AL++ Y+ ++ DA K+F M + + V WT++I+ + +
Sbjct: 71 YMIRSGYEDNLFLCSALVDFYAKCFAIVDANKIFRAMKQHDQVSWTSLIAGFSA---NKQ 127
Query: 137 GRRLLDLAPE--------RDVVMWSIVISGYIESGDMVSARELFDKMPNR--DVMSW--N 184
GR L L E + S++ + ++G + L + + D S+ +
Sbjct: 128 GRDALLLFKEMLGTQIRPNCFTLTSVINACVGQNGVLEHCPTLHVHVIKQGFDTSSFVIS 187
Query: 185 TLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVV 244
+L++ YAN G + +F E E++ +N +I GY +N DAL+ F +M E ++
Sbjct: 188 SLVDCYANWGQIDDAVLLFNETSEKDTVIYNTMISGYCQNLYSEDALKLFVEMR-EKNMS 246
Query: 245 PNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDV 304
P D TL ++L ACS L L G+ VH +G + N++V + LIDMY+K G I+ A V
Sbjct: 247 PTDHTLSSILSACSSLAMLLQGRQVHSLVIKMGSERNVYVASTLIDMYSKGGDIDEAQCV 306
Query: 305 FNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ-PDGVTFVGILSACTHMGL 363
+ +++ + W +MI G A G +AL LFD + +E PD V F +L+AC H G
Sbjct: 307 LDQTSKKNTVLWTSMIMGYAQCGRGLEALELFDYLLTKKELIPDHVCFTAVLTACNHAGF 366
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPMEPDAVIWTSLL 423
+ G YF M+ +Y + P I+ Y C+ DL R G L +A + +MP +P+ +IW+S L
Sbjct: 367 IDKGEEYFNKMITNYGLSPDIDIYACLIDLYARNGNLRKARDLMEEMPYDPNCIIWSSFL 426
Query: 424 GACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRK 483
AC+ + +VE+ A LI++EP N A ++ L++IY G W + + ++ M+ RK
Sbjct: 427 SACKIYGDVELGREAAIQLIKMEPCNAAPYLTLAHIYTTKGLWNEASEVRSLMQQRVKRK 486
Query: 484 LPGCSV 489
PG S+
Sbjct: 487 PPGWSM 492
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 172/338 (50%), Gaps = 16/338 (4%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSC- 62
A K+F M + + +W ++ G+S + RD ++LF EM P N FTL V+ +C
Sbjct: 100 ANKIFRAMKQHDQVSWTSLIAGFSANKQGRDALLLFKEMLGTQIRP-NCFTLTSVINACV 158
Query: 63 SKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWT 122
+ G + +H K+GF +SF+ ++L++ Y+ G + DA +F E E++ V++
Sbjct: 159 GQNGVLEHCPTLHVHVIKQGFDTSSFVISSLVDCYANWGQIDDAVLLFNETSEKDTVIYN 218
Query: 123 AMISAYISCGDVGSGRRLLDLAPERDVVM------WSIVISGYIESGDMVSARE---LFD 173
MIS Y C ++ S L R+ M S ++S ++ R+ L
Sbjct: 219 TMISGY--CQNLYSEDALKLFVEMREKNMSPTDHTLSSILSACSSLAMLLQGRQVHSLVI 276
Query: 174 KM-PNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
KM R+V +TL++ Y+ GD+ + V ++ ++N W +I GYA+ GR +ALE
Sbjct: 277 KMGSERNVYVASTLIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLEALE 336
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG-KWVHVYAESIGYKGNMFVGNALIDM 291
F +L + +++P+ AVL AC+ G +D G ++ + + G ++ + LID+
Sbjct: 337 LFDYLLTKKELIPDHVCFTAVLTACNHAGFIDKGEEYFNKMITNYGLSPDIDIYACLIDL 396
Query: 292 YAKCGVIESAVDVFNCLDRR-DIISWNTMINGLAMHGN 328
YA+ G + A D+ + + I W++ ++ ++G+
Sbjct: 397 YARNGNLRKARDLMEEMPYDPNCIIWSSFLSACKIYGD 434
>Medtr1g099590.1 | pentatricopeptide (PPR) repeat protein | HC |
chr1:44985847-44989750 | 20130731
Length = 912
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 263/518 (50%), Gaps = 11/518 (2%)
Query: 1 MGHARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVR 60
M A KV + PE + W + +G++ R+ + +F +M + P N+FT ++
Sbjct: 269 MVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLP-NNFTYSSLLN 327
Query: 61 SCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG-DAYKVFGEMPERNVV 119
+ S ++ GEQ H G + + ++ AL++MY + +A KVF E+ NV+
Sbjct: 328 ASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALVDMYMKCSHITTNAVKVFREITSPNVM 387
Query: 120 VWTAMISAYISCGDVGSGRRLLDLAP---ERDVVMWSIVISGYIESGDMVSARELFDKMP 176
WT++I+ + S + ++ + S ++ ++ +V L +
Sbjct: 388 CWTSLIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHII 447
Query: 177 NR----DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALE 232
D+ N L++ YA G + V M R+ ++ L + G AL+
Sbjct: 448 KTKVDIDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALK 507
Query: 233 AFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMY 292
M +G + ++F+L + L A + LG ++ GK +H Y+ G++ V N+L+ +Y
Sbjct: 508 VLIHMCNDG-IKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLY 566
Query: 293 AKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+KCG I A F + D SWN +I+G + +G + ALS FD M+ + +PD +T +
Sbjct: 567 SKCGSIHDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLL 626
Query: 353 GILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMPM 412
++SAC+H GL+ G YF SM Y I P+++HY C+ DLLGR G L++A+ + KM
Sbjct: 627 SLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSF 686
Query: 413 EPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARL 472
+PD++I +LL AC H NV + E + +EL+P +PA +++L+N+Y + G +
Sbjct: 687 KPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKT 746
Query: 473 KIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETE 510
+ MR+ G R+ PG +E S V +S E+ E E
Sbjct: 747 RRLMRERGLRRSPGQCWMEIR-SRVHHFSAGEKINEDE 783
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 245/518 (47%), Gaps = 38/518 (7%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
AR +FD+MP + +W + + ++ T+ H D + LF M + P N FTL +RSC
Sbjct: 68 ARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYP-NEFTLSSALRSCF 126
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVG-DAYKVFGEMPE-RNVVVW 121
G G Q+HC A K G + N F+ T+L+E Y+ G +A+K+ + + +VV W
Sbjct: 127 ALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSW 186
Query: 122 TAMISAYISCGDVGSGRRLLDLAPERDVV---MWSIVISGYIESGDMVSARELFDKMPNR 178
T M+S+ + G G + E V + + G + S +S + K+ +
Sbjct: 187 TTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLS----YGKLLHA 242
Query: 179 DVMSWNTLLNGYANSGDVGSFE---------KVFEEMPERNVYSWNVLIGGYARNGRFSD 229
++ + LN + V + KV PE +VY W LI G+ +N + +
Sbjct: 243 HLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVRE 302
Query: 230 ALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALI 289
A+ F+ M + G ++PN+FT ++L A S + +LD+G+ H +G + ++++GNAL+
Sbjct: 303 AISVFRDMELSG-LLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALV 361
Query: 290 DMYAKCGVIES-AVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDG 348
DMY KC I + AV VF + +++ W ++I G A D+ LF +M+ + +P+
Sbjct: 362 DMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAAGVRPNS 420
Query: 349 VTFVGILSACTHM-GLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
T IL AC+ LV L+ + I I + D G++D+A S +
Sbjct: 421 FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDI--DIAVANALVDTYAGVGMIDEAWSVI 478
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHL----IELEPKNPANFVMLSNIYKDL 463
M + D++ +T L + +A H+ I+++ + A+F+ + L
Sbjct: 479 GTMNLR-DSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFL---SAAAGL 534
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYS 501
G + +L +GF++ S +S+V YS
Sbjct: 535 GTMETGKQLHCYSVKSGFQRCHSVS-----NSLVHLYS 567
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 137/283 (48%), Gaps = 12/283 (4%)
Query: 177 NRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQ 236
D+ N LL+ YA + V +F+EMP R+V SW ++ + + SDAL+ F
Sbjct: 46 QHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDM 105
Query: 237 MLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCG 296
M+ G+ PN+FTL + L +C LG + G +H A +G + N FVG +L++ Y KCG
Sbjct: 106 MIGSGEY-PNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCG 164
Query: 297 VIESAVDVFNCL----DRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFV 352
+V+ + L D D++SW TM++ L +G +A ++ +M S P+ TFV
Sbjct: 165 C--CSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFV 222
Query: 353 GILSACTH-MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKMP 411
+L A + +GL L+ ++ + + + D+ + + A+ P
Sbjct: 223 KLLGAVSSFLGLSYGKLLHAHLIM--FGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTP 280
Query: 412 MEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFV 454
E D +WT+L+ + V A F+ + EL P NF
Sbjct: 281 -EYDVYLWTTLISGFTQNLQVREAISVFRDM-ELSGLLPNNFT 321
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 185/424 (43%), Gaps = 26/424 (6%)
Query: 15 NTATWNAMFNGYSLTESHR--DVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKAGAVREGE 72
+ +W M + SL E+ + + ++ +M + P N FT ++ + S + G+
Sbjct: 182 DVVSWTTMLS--SLVENGKWGEAFEIYVKMIESGVYP-NEFTFVKLLGAVSSFLGLSYGK 238
Query: 73 QVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYISCG 132
+H G + N L TA+++MYS + DA KV PE +V +WT +IS +
Sbjct: 239 LLHAHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNL 298
Query: 133 DVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR--------DVMSWN 184
V + ++ + S + + + + +L ++ +R D+ N
Sbjct: 299 QVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGN 358
Query: 185 TLLNGYANSGDVGSFE-KVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDV 243
L++ Y + + KVF E+ NV W LI G+A R D+ + F +M G V
Sbjct: 359 ALVDMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAG-V 416
Query: 244 VPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVD 303
PN FT+ A+L ACS+ +L +H + ++ V NAL+D YA G+I+ A
Sbjct: 417 RPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWS 476
Query: 304 VFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHMGL 363
V ++ RD I++ + L G+ AL + M N + D + LSA +G
Sbjct: 477 VIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGT 536
Query: 364 VRDGFLYFQSMVDHYSIIPQIEHYGCMAD----LLGRAGLLDQAVSFVRKMPMEPDAVIW 419
+ G + YS+ + +++ L + G + A + + EPDA W
Sbjct: 537 METG-----KQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSIHDANRAFKDIS-EPDAFSW 590
Query: 420 TSLL 423
L+
Sbjct: 591 NGLI 594
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 3/134 (2%)
Query: 236 QMLVEGDVVPNDF--TLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYA 293
QML + F T + VL C+ +L G +H +G + ++++ N L+ +YA
Sbjct: 2 QMLCTKTFSLSRFQETCLRVLSFCNS-NSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYA 60
Query: 294 KCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQPDGVTFVG 353
K + A +F+ + RD++SW T+++ + +DAL LFD M S E P+ T
Sbjct: 61 KTFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSS 120
Query: 354 ILSACTHMGLVRDG 367
L +C +G G
Sbjct: 121 ALRSCFALGEFERG 134
>Medtr5g043920.1 | PPR containing plant-like protein | HC |
chr5:19295539-19293687 | 20130731
Length = 498
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/421 (32%), Positives = 219/421 (52%), Gaps = 46/421 (10%)
Query: 150 VMWSIVISGYIESGDMVSARELFDKM------PNR------------------------- 178
+ W+I+I GY S + + +F KM PN+
Sbjct: 77 ISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIFKSCAMALVLCEGKQVHAD 136
Query: 179 --------DVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDA 230
DV N ++N Y + KVF+EM R + SWN ++ N SD
Sbjct: 137 LVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLSDG 196
Query: 231 LEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALID 290
+ F +M + P++ ++V +L C+ LG L +G+WVH G ++ +G AL+D
Sbjct: 197 IGYFFKMR-DCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALVD 255
Query: 291 MYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNSREQ---PD 347
MY K G + A VF +++R++ +W+ MI GLA HG +AL LFD M + + P+
Sbjct: 256 MYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNISPN 315
Query: 348 GVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFV 407
VT++G+L AC+H G+V +GF YF+ M + I P + HYG M D+LGRAG L +A F+
Sbjct: 316 YVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAYRFI 375
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNVE---IAELAFQHLIELEPKNPANFVMLSNIYKDLG 464
+ MP PD ++W +LL AC H + I + + L+E+EPK N V+++N+Y ++G
Sbjct: 376 QSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYAEVG 435
Query: 465 RWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLLR 524
W+ A ++ MRD G +K+ G S ++ S+ F++ + P+ +Y L L + L+
Sbjct: 436 NWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDLLDALNLHLK 495
Query: 525 L 525
+
Sbjct: 496 M 496
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 103/362 (28%), Positives = 173/362 (47%), Gaps = 31/362 (8%)
Query: 1 MGHARK-VFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVV 59
+ HARK VF P+ +WN + GY+ ++S + + +F +M P N T P +
Sbjct: 60 LSHARKLVFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKP-NKLTYPFIF 118
Query: 60 RSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVV 119
+SC+ A + EG+QVH K G + ++C +I Y + A KVF EM R +V
Sbjct: 119 KSCAMALVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDEMCVRTIV 178
Query: 120 VWTAMISA-----YISCGDVGSGRRLLDLAPERDVVMWSIVIS-----GYIESGDMVSAR 169
W ++++A ++S G +G ++ D A E D +++S GY+ G V ++
Sbjct: 179 SWNSVMTACVENVWLSDG-IGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQ 237
Query: 170 ELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSD 229
+ M V L++ Y SG +G VFE M +RNV++W+ +I G A++G +
Sbjct: 238 LILKGMV-LSVHLGTALVDMYGKSGALGYARVVFERMEKRNVWTWSAMIMGLAQHGFAEE 296
Query: 230 ALEAFKQM--LVEGDVVPNDFTLVAVLLACSRLGALDMG-------KWVHVYAESIGYKG 280
AL F M ++ PN T + VL ACS G +D G ++VH G K
Sbjct: 297 ALVLFDMMNDKKSNNISPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVH------GIKP 350
Query: 281 NMFVGNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQM 339
M A++D+ + G + A + D I W T+++ +H + D + D++
Sbjct: 351 MMVHYGAMVDVLGRAGHLGEAYRFIQSMPFAPDPIVWRTLLSACTVH-DVCDRTGIGDKV 409
Query: 340 KN 341
+
Sbjct: 410 RK 411
>Medtr6g060470.1 | pentatricopeptide (PPR) repeat protein | HC |
chr6:20800229-20798334 | 20130731
Length = 403
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/372 (37%), Positives = 202/372 (54%), Gaps = 55/372 (14%)
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
M AR +FD +RD+ SWNT++ Y SG++ + +F+EM ER+V SW+ +I GY +
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
G F + LE F ML + +V PN++T+V+ L K N +
Sbjct: 61 GCFMEDLEFFHNML-QSEVKPNEYTMVSAL----------------------AIKMNDRL 97
Query: 285 GNALIDMYAKCGVIESAVDVFNCLD-RRDIISWNTMINGLAMHGNTADALSLFDQMKNSR 343
+LIDMYAKCG I+SA VF+ +R + WN MI G AMHG +A+SLF+QMK R
Sbjct: 98 LASLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVER 157
Query: 344 EQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQA 403
P+ VTF+ +L+AC+H ++++G YF+ M Y I P+IEHYGCM DLL R+ LL +A
Sbjct: 158 VSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEA 217
Query: 404 VSFVRKMPMEPDAVIWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDL 463
+ MPM PD IW +LL ACR +K++E + + E++P + V+L NIY
Sbjct: 218 EEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTS 277
Query: 464 GRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLDERHPETESIYRALRGLTMLL 523
GRW + AR+ L ER+ E IY L + L
Sbjct: 278 GRWNE-ARI-----------------------------LRERN-EIREIYSFLEEMIRKL 306
Query: 524 RLHGYVPNLVDV 535
++ GYVP L +V
Sbjct: 307 KIAGYVPELGEV 318
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 119/244 (48%), Gaps = 21/244 (8%)
Query: 105 DAYKVFGEMPERNVVVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD 164
DA VF +R++ W MI Y+ G++ + L D ERDVV WS +I+GY++ G
Sbjct: 3 DARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQVGC 62
Query: 165 MVSARELFDKM------PNRDVMS-----------WNTLLNGYANSGDVGSFEKVFEEMP 207
+ E F M PN M +L++ YA G++ S VF E
Sbjct: 63 FMEDLEFFHNMLQSEVKPNEYTMVSALAIKMNDRLLASLIDMYAKCGEIDSASSVFHEHK 122
Query: 208 -ERNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMG 266
+R V+ WN +IGG+A +G+ +A+ F+QM VE V PN T +A+L ACS + G
Sbjct: 123 VKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVE-RVSPNKVTFIALLNACSHGYMIKEG 181
Query: 267 K-WVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRR-DIISWNTMINGLA 324
K + + + G + ++D+ ++ +++ A ++ + D+ W ++N
Sbjct: 182 KSYFELMSSDYGINPEIEHYGCMVDLLSRSELLKEAEEMILSMPMAPDVAIWGALLNACR 241
Query: 325 MHGN 328
++ +
Sbjct: 242 IYKD 245
>Medtr5g022740.1 | PPR containing plant-like protein | HC |
chr5:8999294-8995144 | 20130731
Length = 665
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 238/480 (49%), Gaps = 61/480 (12%)
Query: 49 PLNHFTLPIVVRSCSKAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYK 108
PL+ F + V+ S + + + + K GF NS+ +LI S V +
Sbjct: 99 PLDTFCVNTVINSYCNSYVPHKAIVFYFSSLKIGFFANSYTFVSLISACSKMSCVDNGKM 158
Query: 109 VFGEMPERNV----VVWTAMISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGD 164
G+ + V V ++ Y SCG Y+E
Sbjct: 159 CHGQAVKNGVDFVLPVENSLAHMYGSCG--------------------------YVEV-- 190
Query: 165 MVSARELFDKMPNRDVMSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARN 224
AR +FD M +RD++SWN++++GY GD+ + K+F+ MPERN+ +WN LI GY++
Sbjct: 191 ---ARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKG 247
Query: 225 GRFSDALEAFKQMLVEGDVVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFV 284
AL+ F++M + N T+V + AC R G L GK VH + + ++ +
Sbjct: 248 RNPGYALKLFREM-GRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLIL 306
Query: 285 GNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQMKNS-- 342
ALIDMY KCG +E+A VF + R+++SWN MI G +HGN D LSLFD M
Sbjct: 307 DTALIDMYCKCGRVEAASKVFERMSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMER 366
Query: 343 ------------------REQPDGVTFVGILSACTHMGLVRDGFLYFQSMVDHYSIIPQI 384
R PD +TF+GIL AC L+ +G YF+ M+D + + P
Sbjct: 367 VKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQMIDVFGLKPNF 426
Query: 385 EHYGCMADLLGRAGLLDQAVSFVRKMP-----MEPDAVIWTSLLGACRTHKNVEIAELAF 439
H+ CMA+LL GL+D+A ++ M + ++++W SLLG CR ++V + E
Sbjct: 427 AHFWCMANLLANVGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRFKRDVYLGEQIA 486
Query: 440 QHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMRDTGFRKLPGCSVIECNDSVVEF 499
+ LI+ +P N A + L IY +W++V+R++ M++ +PG ++++ + V F
Sbjct: 487 KLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIPGSNLVDLKNIVHNF 546
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 4 ARKVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCS 63
A K+FD MPE N TWN + +GYS + + LF EM R N T+ V +C
Sbjct: 222 AHKLFDVMPERNLVTWNCLISGYSKGRNPGYALKLFREMGRLRIRE-NARTMVCAVTACG 280
Query: 64 KAGAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTA 123
++G ++EG+ VH + + + L TALI+MY G V A KVF M RN+V W A
Sbjct: 281 RSGRLKEGKSVHGSMIRLFMRSSLILDTALIDMYCKCGRVEAASKVFERMSSRNLVSWNA 340
Query: 124 MISAYISCGDVGSGRRLLDL 143
MI + G+ G L DL
Sbjct: 341 MILGHCIHGNPEDGLSLFDL 360
>Medtr2g028240.1 | PPR containing plant-like protein | HC |
chr2:10416867-10418417 | 20130731
Length = 516
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 225/433 (51%), Gaps = 19/433 (4%)
Query: 71 GEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVFGEMPERNVVVWTAMISAYIS 130
G+Q+H K G + TAL++MYS GS+ + KVF EM R+VV W ++S ++
Sbjct: 77 GKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSCFLR 136
Query: 131 CGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPN------RDVMSWN 184
CG R+L +V M + ++ + A E ++ RD++ +
Sbjct: 137 CGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDLVVLS 196
Query: 185 T-LLNGYANSGDVGSFEKVFEEMPE-RNVYSWNVLIGGYARNGRFSDALEAFKQMLVEGD 242
T L++ Y++ G V VF + ++ N L+ G +NGR+ EAFK M +
Sbjct: 197 TALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKNGRYR---EAFKVMSL--- 250
Query: 243 VVPNDFTLVAVLLACSRLGALDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAV 302
V PN L +VL+ CS L GK VH A G+ + N L+DMYAKCG I A
Sbjct: 251 VKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAW 310
Query: 303 DVFNCLDRRDIISWNTMINGLAMHGNTADALSLFDQM--KNSREQPDGVTFVGILSACTH 360
VF+ + ++D+ISW MI+G +G +A+ LF +M S P+ VTF+ +LSAC H
Sbjct: 311 SVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSEVLPNSVTFLSVLSACGH 370
Query: 361 MGLVRDGFLYFQSMVDHYSIIPQIEHYGCMADLLGRAGLLDQAVSFVRKM---PMEPDAV 417
GLV +G F M + Y I P+ EHY C D+LGRAG +++ S + M P A
Sbjct: 371 SGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKIEEVWSAYQNMIDQGTSPTAG 430
Query: 418 IWTSLLGACRTHKNVEIAELAFQHLIELEPKNPANFVMLSNIYKDLGRWQDVARLKIAMR 477
+W SLL AC ++ E E A + L++LEP +N V+ SN Y +GRW V L+ MR
Sbjct: 431 VWISLLNACSLGQDFERGEFAAKSLLQLEPNKASNIVLASNFYAAIGRWDCVGELRSMMR 490
Query: 478 DTGFRKLPGCSVI 490
+ G K G S I
Sbjct: 491 EKGLVKEAGNSWI 503
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 158/331 (47%), Gaps = 14/331 (4%)
Query: 6 KVFDKMPEPNTATWNAMFNGYSLTESHRDVVVLFAEMNRAAAAPLNHFTLPIVVRSCSKA 65
KVFD+M + WN + + + + + + EM R ++ FTL V++ C+
Sbjct: 114 KVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENV-EMSEFTLCSVLKCCASL 172
Query: 66 GAVREGEQVHCVAAKRGFKWNSFLCTALIEMYSAKGSVGDAYKVF-GEMPERNVVVWTAM 124
A+ G QVH + G L TALI+ YS+ G V A VF G ++ ++ ++
Sbjct: 173 KALEFGRQVHGLVVAMGRDL-VVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSL 231
Query: 125 ISAYISCGDVGSGRRLLDLAPERDVVMWSIVISGYIESGDMVSARELFDKMPNR----DV 180
+S I G +++ L V + S+++ ES D+++ +++ + +
Sbjct: 232 VSGCIKNGRYREAFKVMSLVKPNAVALTSVLVCCSEES-DLLTGKQVHCVAVRQGFTFET 290
Query: 181 MSWNTLLNGYANSGDVGSFEKVFEEMPERNVYSWNVLIGGYARNGRFSDALEAFKQMLVE 240
N LL+ YA G + VF+ + +++V SW +I GY RNG +A+E F +M+ +
Sbjct: 291 QLCNVLLDMYAKCGKILQAWSVFDGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMED 350
Query: 241 G-DVVPNDFTLVAVLLACSRLGALDMGKWV-HVYAESIGYKGNMFVGNALIDMYAKCGVI 298
G +V+PN T ++VL AC G ++ GK ++ E G ID+ + G I
Sbjct: 351 GSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAGKI 410
Query: 299 ESAVDVF-NCLDRRDIIS---WNTMINGLAM 325
E + N +D+ + W +++N ++
Sbjct: 411 EEVWSAYQNMIDQGTSPTAGVWISLLNACSL 441
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 105/265 (39%), Gaps = 49/265 (18%)
Query: 204 EEMPERNVYSWNVLIGGYARNGRFSDALEAFKQML-VEGDVVPNDFTLVAVLLACSRLGA 262
++ R + N LI Y R G A F + + D+ + FT + R
Sbjct: 20 HQLLHRPISELNSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLL------RPSP 73
Query: 263 LDMGKWVHVYAESIGYKGNMFVGNALIDMYAKCGVIESAVDVFNCLDRRDIISWNTMING 322
+GK +H G AL+DMY++ G + S++ VF+ + RD+++WNT+++
Sbjct: 74 TSLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHRDVVAWNTLLSC 133
Query: 323 LAMHGNTADALSLFDQMKNSREQPDGVTFVGILSACTHM----------GLV----RDGF 368
G +A+ + +M + T +L C + GLV RD
Sbjct: 134 FLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQVHGLVVAMGRDLV 193
Query: 369 LYFQSMVDHYSIIPQIEH---------------------YGCMADLLGRAGLLDQAVSFV 407
+ +++D YS + + H GC+ + GR + +S V
Sbjct: 194 VLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLVSGCIKN--GRYREAFKVMSLV 251
Query: 408 RKMPMEPDAVIWTSLLGACRTHKNV 432
+ P+AV TS+L C ++
Sbjct: 252 K-----PNAVALTSVLVCCSEESDL 271