Miyakogusa Predicted Gene

Lj4g3v0450200.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450200.1 Non Characterized Hit- tr|I3T4M7|I3T4M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,58.96,0,LISH,LisH
dimerisation motif; CTLH,CTLH, C-terminal LisH motif; RAN BINDING
PROTEIN 9-RELATED,NULL; ,CUFF.47197.1
         (243 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g012810.1 | LisH and RanBPM domain protein | HC | chr2:330...   255   2e-68
Medtr2g012810.2 | LisH and RanBPM domain protein | HC | chr2:330...   240   7e-64
Medtr1g019870.1 | LisH and RanBPM domain protein | HC | chr1:606...    87   2e-17
Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein ...    69   4e-12
Medtr1g116055.2 | macrophage erythroblast attacher-like protein ...    54   1e-07
Medtr1g116055.1 | macrophage erythroblast attacher-like protein ...    54   1e-07

>Medtr2g012810.1 | LisH and RanBPM domain protein | HC |
           chr2:3306938-3301342 | 20130731
          Length = 241

 Score =  255 bits (652), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 125/220 (56%), Positives = 166/220 (75%)

Query: 14  EIKRTFGVKDLKTYVKWLNTRRGIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTG 73
           +I+     K + T  +W      +KIRK+DMNK+VM+FL+TEG+ +AAEKF  E+G +  
Sbjct: 13  QIEAMAASKKVITREEWEKKLNNVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKESGTEPD 72

Query: 74  IDIGNVADRMAVKTALQNGDVQAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKT 133
           ID+  + DRMAVK A+Q+G+V+ AIEK+ND++PEILDT+P LFF LQQ ++IELIRNGK 
Sbjct: 73  IDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIELIRNGKI 132

Query: 134 EEALKYAREDLAPTVEKNQSFLEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNA 193
           EEAL++A+E+LAP  E+NQSFLE++E+TVALL F+D SNCP GELLDIS RLK A++VNA
Sbjct: 133 EEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPVGELLDISQRLKTASEVNA 192

Query: 194 VILTNQRFEQDSQLLYLLKMLRWVNIQLAEVTDYPLMRDF 233
            ILT+Q  E+D +L  LLKML W   QL E   +P + D 
Sbjct: 193 AILTSQSHEKDPKLPSLLKMLIWAQNQLDEKAAFPRINDL 232


>Medtr2g012810.2 | LisH and RanBPM domain protein | HC |
           chr2:3305823-3301342 | 20130731
          Length = 199

 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 116/190 (61%), Positives = 151/190 (79%)

Query: 44  MNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAVKTALQNGDVQAAIEKLND 103
           MNK+VM+FL+TEG+ +AAEKF  E+G +  ID+  + DRMAVK A+Q+G+V+ AIEK+ND
Sbjct: 1   MNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVND 60

Query: 104 MDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVA 163
           ++PEILDT+P LFF LQQ ++IELIRNGK EEAL++A+E+LAP  E+NQSFLE++E+TVA
Sbjct: 61  LNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVA 120

Query: 164 LLGFKDPSNCPYGELLDISLRLKFANKVNAVILTNQRFEQDSQLLYLLKMLRWVNIQLAE 223
           LL F+D SNCP GELLDIS RLK A++VNA ILT+Q  E+D +L  LLKML W   QL E
Sbjct: 121 LLAFEDVSNCPVGELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLDE 180

Query: 224 VTDYPLMRDF 233
              +P + D 
Sbjct: 181 KAAFPRINDL 190


>Medtr1g019870.1 | LisH and RanBPM domain protein | HC |
           chr1:6062059-6066368 | 20130731
          Length = 216

 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 88/162 (54%), Gaps = 2/162 (1%)

Query: 36  GIKIRKQDMNKIVMDFLLTEGYDEAAEKFHLETGIQTGID-IGNVADRMAVKTALQNGDV 94
            I I ++D++ IV+ +L+   Y+E+AE F   TG +   D + N+  R  +  ++  G+ 
Sbjct: 10  NIAISEKDVSNIVLSYLIHNCYEESAESFMAGTGAKRPTDYLDNMEKRKKIFHSVLEGNA 69

Query: 95  QAAIEKLNDMDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSF 154
             AIE    + PEIL  +  L F L     +EL+R+ K  EAL +A+  L+P   K+  +
Sbjct: 70  LKAIELTEQLTPEILVKNTDLLFDLLSLHFVELVRSRKCTEALDFAQTKLSP-FGKDGQY 128

Query: 155 LEDMEKTVALLGFKDPSNCPYGELLDISLRLKFANKVNAVIL 196
            E ++  +ALL +K+P + P   LL +  R + A+ +N  IL
Sbjct: 129 TEKLQDFMALLAYKEPEDSPMFHLLSLEYRQELADSLNRTIL 170


>Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein |
           HC | chr4:11335272-11345067 | 20130731
          Length = 468

 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 97/209 (46%), Gaps = 26/209 (12%)

Query: 13  EEIKRTFGVK----DLKTYVKWLNTRRGIKIRKQDMNK-----IVMDFLLTEGYDEAAEK 63
           EE+   FG K    DLK Y      ++ IKI +  ++      IV  +LL  GY++    
Sbjct: 209 EEVHVNFGQKPFTFDLKEYEAQERMKQQIKIEEVPVSPNASYGIVRSYLLHYGYEDTLNS 268

Query: 64  FH-------------LETGIQTGIDIGNVADRMAVKTALQNGDVQAAIEKLNDMDPEIL- 109
           F               E GI        +  R  ++  +++G++ AA  KL +  P+I  
Sbjct: 269 FDEASRSTIPPINIVQENGIDDQETTYALNHRKTLRQLIRDGEIDAAFGKLREWYPQIAE 328

Query: 110 DTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDM-EKTVALLGFK 168
           D +  + F L   + IEL+R G  EEA+KY R +L+       S  ED+ +  VALL ++
Sbjct: 329 DNTSAMCFLLHCQKFIELVRVGALEEAVKYGRIELSSFF--GLSLFEDIVQDCVALLAYE 386

Query: 169 DPSNCPYGELLDISLRLKFANKVNAVILT 197
            P     G LL  S R   A+ VNA+IL+
Sbjct: 387 RPLESAVGYLLKDSQREVVADAVNAMILS 415


>Medtr1g116055.2 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446970-52441637 | 20130731
          Length = 322

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 44  MNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAVKTALQNGDVQAAIEKLND 103
           + +I++D++L   Y + AEK    + +Q  +DI    +   V  ALQN D   A+    D
Sbjct: 145 LKRILVDYMLRMSYYDTAEKLAECSNLQDLVDIDVFQEAKTVIDALQNKDAAPALAWCAD 204

Query: 104 MDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVA 163
               +  +   L F+L+  + IEL+R      A+ YA++ LAP      + ++++++  A
Sbjct: 205 NKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWA---GNHMKELQEVTA 261

Query: 164 LLGFKDPSNC 173
           LL FK  + C
Sbjct: 262 LLAFKRDTPC 271


>Medtr1g116055.1 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446990-52441637 | 20130731
          Length = 415

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 44  MNKIVMDFLLTEGYDEAAEKFHLETGIQTGIDIGNVADRMAVKTALQNGDVQAAIEKLND 103
           + +I++D++L   Y + AEK    + +Q  +DI    +   V  ALQN D   A+    D
Sbjct: 145 LKRILVDYMLRMSYYDTAEKLAECSNLQDLVDIDVFQEAKTVIDALQNKDAAPALAWCAD 204

Query: 104 MDPEILDTSPHLFFRLQQHQMIELIRNGKTEEALKYAREDLAPTVEKNQSFLEDMEKTVA 163
               +  +   L F+L+  + IEL+R      A+ YA++ LAP      + ++++++  A
Sbjct: 205 NKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWA---GNHMKELQEVTA 261

Query: 164 LLGFKDPSNC 173
           LL FK  + C
Sbjct: 262 LLAFKRDTPC 271