Miyakogusa Predicted Gene

Lj4g3v0450190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0450190.1 Non Characterized Hit- tr|I3T4M7|I3T4M7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,60.71,0,LISH,LisH
dimerisation motif; CTLH,CTLH, C-terminal LisH motif; Lissencephaly
type-1-like homology m,CUFF.47195.1
         (232 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g012810.1 | LisH and RanBPM domain protein | HC | chr2:330...   227   6e-60
Medtr2g012810.2 | LisH and RanBPM domain protein | HC | chr2:330...   208   4e-54
Medtr1g019870.1 | LisH and RanBPM domain protein | HC | chr1:606...    84   1e-16
Medtr1g116055.2 | macrophage erythroblast attacher-like protein ...    53   2e-07
Medtr1g116055.1 | macrophage erythroblast attacher-like protein ...    53   3e-07
Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein ...    48   8e-06

>Medtr2g012810.1 | LisH and RanBPM domain protein | HC |
           chr2:3306938-3301342 | 20130731
          Length = 241

 Score =  227 bits (579), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 120/216 (55%), Positives = 155/216 (71%), Gaps = 1/216 (0%)

Query: 11  LIALFTELVAQPVPGWLINRDNWKKRLDGVEIGEEDMKVIVMNFLVVEGYVEVAETFRLA 70
           +I    ++ A      +I R+ W+K+L+ V+I +EDM  +VMNFLV EG+V+ AE FR  
Sbjct: 7   VIRQLAQIEAMAASKKVITREEWEKKLNNVKIRKEDMNKLVMNFLVTEGFVDAAEKFRKE 66

Query: 71  TGTNPDIDIGRVADRMAVKTALQNGDVQAAIEKLNDMDPEILGTNRQLFFRVQLQRLIEL 130
           +GT PDID+  + DRMAVK A+Q+G+V+ AIEK+ND++PEIL TN QLFF +Q QRLIEL
Sbjct: 67  SGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVNDLNPEILDTNPQLFFHLQQQRLIEL 126

Query: 131 IRNRNTEEALACAKEVLAPIAEEHRNFLPVLEKTVALLAFEDPSNCPFEGEVLDISLRSS 190
           IRN   EEAL  A+E LAP  EE+++FL  LE+TVALLAFED SNCP  GE+LDIS R  
Sbjct: 127 IRNGKIEEALEFAQEELAPRGEENQSFLEELERTVALLAFEDVSNCPV-GELLDISQRLK 185

Query: 191 IATIVNAAILKSQNLDKVSALQYLVKMWIWAQTNCE 226
            A+ VNAAIL SQ+ +K   L  L+KM IWAQ   +
Sbjct: 186 TASEVNAAILTSQSHEKDPKLPSLLKMLIWAQNQLD 221


>Medtr2g012810.2 | LisH and RanBPM domain protein | HC |
           chr2:3305823-3301342 | 20130731
          Length = 199

 Score =  208 bits (529), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 109/176 (61%), Positives = 133/176 (75%), Gaps = 1/176 (0%)

Query: 47  MKVIVMNFLVVEGYVEVAETFRLATGTNPDIDIGRVADRMAVKTALQNGDVQAAIEKLND 106
           M  +VMNFLV EG+V+ AE FR  +GT PDID+  + DRMAVK A+Q+G+V+ AIEK+ND
Sbjct: 1   MNKLVMNFLVTEGFVDAAEKFRKESGTEPDIDLATITDRMAVKKAVQSGNVEDAIEKVND 60

Query: 107 MDPEILGTNRQLFFRVQLQRLIELIRNRNTEEALACAKEVLAPIAEEHRNFLPVLEKTVA 166
           ++PEIL TN QLFF +Q QRLIELIRN   EEAL  A+E LAP  EE+++FL  LE+TVA
Sbjct: 61  LNPEILDTNPQLFFHLQQQRLIELIRNGKIEEALEFAQEELAPRGEENQSFLEELERTVA 120

Query: 167 LLAFEDPSNCPFEGEVLDISLRSSIATIVNAAILKSQNLDKVSALQYLVKMWIWAQ 222
           LLAFED SNCP  GE+LDIS R   A+ VNAAIL SQ+ +K   L  L+KM IWAQ
Sbjct: 121 LLAFEDVSNCPV-GELLDISQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLIWAQ 175


>Medtr1g019870.1 | LisH and RanBPM domain protein | HC |
           chr1:6062059-6066368 | 20130731
          Length = 216

 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 3/183 (1%)

Query: 35  KRLDGVEIGEEDMKVIVMNFLVVEGYVEVAETFRLATGTNPDID-IGRVADRMAVKTALQ 93
           ++ D + I E+D+  IV+++L+   Y E AE+F   TG     D +  +  R  +  ++ 
Sbjct: 6   RQYDNIAISEKDVSNIVLSYLIHNCYEESAESFMAGTGAKRPTDYLDNMEKRKKIFHSVL 65

Query: 94  NGDVQAAIEKLNDMDPEILGTNRQLFFRVQLQRLIELIRNRNTEEALACAKEVLAPIAEE 153
            G+   AIE    + PEIL  N  L F +     +EL+R+R   EAL  A+  L+P  ++
Sbjct: 66  EGNALKAIELTEQLTPEILVKNTDLLFDLLSLHFVELVRSRKCTEALDFAQTKLSPFGKD 125

Query: 154 HRNFLPVLEKTVALLAFEDPSNCPFEGEVLDISLRSSIATIVNAAILKSQNLDKVSALQY 213
            + +   L+  +ALLA+++P + P    +L +  R  +A  +N  IL   NL   +A++ 
Sbjct: 126 GQ-YTEKLQDFMALLAYKEPEDSPM-FHLLSLEYRQELADSLNRTILAYFNLPNYTAMEK 183

Query: 214 LVK 216
           L++
Sbjct: 184 LIQ 186


>Medtr1g116055.2 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446970-52441637 | 20130731
          Length = 322

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 47  MKVIVMNFLVVEGYVEVAETFRLATGTNPDIDIGRVADRMAVKTALQNGDVQAAIEKLND 106
           +K I++++++   Y + AE     +     +DI    +   V  ALQN D   A+    D
Sbjct: 145 LKRILVDYMLRMSYYDTAEKLAECSNLQDLVDIDVFQEAKTVIDALQNKDAAPALAWCAD 204

Query: 107 MDPEILGTNRQLFFRVQLQRLIELIRNRNTEEALACAKEVLAPIAEEHRNFLPVLEKTVA 166
               +  +  +L F+++LQ  IEL+R  +   A+A AK+ LAP A  H   +  L++  A
Sbjct: 205 NKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWAGNH---MKELQEVTA 261

Query: 167 LLAFEDPSNC 176
           LLAF+  + C
Sbjct: 262 LLAFKRDTPC 271


>Medtr1g116055.1 | macrophage erythroblast attacher-like protein |
           HC | chr1:52446990-52441637 | 20130731
          Length = 415

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 47  MKVIVMNFLVVEGYVEVAETFRLATGTNPDIDIGRVADRMAVKTALQNGDVQAAIEKLND 106
           +K I++++++   Y + AE     +     +DI    +   V  ALQN D   A+    D
Sbjct: 145 LKRILVDYMLRMSYYDTAEKLAECSNLQDLVDIDVFQEAKTVIDALQNKDAAPALAWCAD 204

Query: 107 MDPEILGTNRQLFFRVQLQRLIELIRNRNTEEALACAKEVLAPIAEEHRNFLPVLEKTVA 166
               +  +  +L F+++LQ  IEL+R  +   A+A AK+ LAP A  H   +  L++  A
Sbjct: 205 NKSRLKKSKSKLEFQLRLQEFIELVRTESNLRAIAYAKKYLAPWAGNH---MKELQEVTA 261

Query: 167 LLAFEDPSNC 176
           LLAF+  + C
Sbjct: 262 LLAFKRDTPC 271


>Medtr4g032800.1 | SPla/RYanodine receptor (SPRY) domain protein |
           HC | chr4:11335272-11345067 | 20130731
          Length = 468

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 16/167 (9%)

Query: 50  IVMNFLVVEGYVEVAETFRLAT-GTNPDIDIGR------------VADRMAVKTALQNGD 96
           IV ++L+  GY +   +F  A+  T P I+I +            +  R  ++  +++G+
Sbjct: 252 IVRSYLLHYGYEDTLNSFDEASRSTIPPINIVQENGIDDQETTYALNHRKTLRQLIRDGE 311

Query: 97  VQAAIEKLNDMDPEILGTNRQ-LFFRVQLQRLIELIRNRNTEEALACAKEVLAPIAEEHR 155
           + AA  KL +  P+I   N   + F +  Q+ IEL+R    EEA+   +  L+       
Sbjct: 312 IDAAFGKLREWYPQIAEDNTSAMCFLLHCQKFIELVRVGALEEAVKYGRIELSSFFGLSL 371

Query: 156 NFLPVLEKTVALLAFEDPSNCPFEGEVLDISLRSSIATIVNAAILKS 202
            F  +++  VALLA+E P      G +L  S R  +A  VNA IL +
Sbjct: 372 -FEDIVQDCVALLAYERPLESAV-GYLLKDSQREVVADAVNAMILST 416