Miyakogusa Predicted Gene

Lj4g3v0412700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0412700.1 tr|G7JTY4|G7JTY4_MEDTR LL-diaminopimelate
aminotransferase OS=Medicago truncatula GN=MTR_4g092620
PE,91.32,0,DAPAT_plant: LL-diaminopimelate
aminotransferase,Diaminopimelate aminotransferase, DapL,
plant/Chlam,CUFF.47096.1
         (461 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC | chr...   820   0.0  
Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC | chr...   563   e-160
Medtr4g011820.1 | aspartate aminotransferase | HC | chr4:2998684...    71   2e-12
Medtr8g091280.1 | aspartate aminotransferase | HC | chr8:3810686...    69   1e-11
Medtr8g061360.1 | tyrosine/nicotianamine family aminotransferase...    68   2e-11
Medtr7g106830.1 | aspartate aminotransferase | HC | chr7:4351617...    64   2e-10
Medtr3g072680.1 | aspartate aminotransferase family protein | HC...    61   2e-09
Medtr3g072670.1 | aspartate aminotransferase family protein | HC...    60   6e-09
Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like prot...    52   2e-06

>Medtr4g092620.1 | LL-diaminopimelate aminotransferase | HC |
           chr4:36730817-36736760 | 20130731
          Length = 459

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/435 (90%), Positives = 413/435 (94%), Gaps = 2/435 (0%)

Query: 27  RSQVSLPVNVKSVNICKCVATPQEAETAYKTKVSRNANMGKLQAGYLFPEVARRRNVHLL 86
           RSQVSLPV  KSV+ICKCVATPQEAETAYKT+VSRN N+GKLQAGYLFPE+ARRR+ HLL
Sbjct: 27  RSQVSLPV--KSVSICKCVATPQEAETAYKTRVSRNENLGKLQAGYLFPEIARRRSAHLL 84

Query: 87  KYPDAKVISLGIGDTTEPIPEVITSAMAKRSQALSTLEGYSGYGAEQGEKPLRSAIASTF 146
           KYPDAK+ISLGIGDTTEPIPEVITSA+AK+S ALSTLEGYSGYGAEQGEKPLRSAIASTF
Sbjct: 85  KYPDAKIISLGIGDTTEPIPEVITSALAKKSHALSTLEGYSGYGAEQGEKPLRSAIASTF 144

Query: 147 YGDLGIEEDDIFVSDGAKCDISRLQIVFGSDVKMAVQDPSYPAYVDSSVIMGQTGSFQKD 206
           Y DLGIE+DDIFVSDGAKCDISRLQIVFGS+VKMAVQDPSYPAYVDSSVIMGQTG +QKD
Sbjct: 145 YPDLGIEDDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGLYQKD 204

Query: 207 VEKFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVQYAKDNG 266
           V+KFANIEYMRCNPENGFFPDLSS+SRPDIIFFCSPNNPTGAAATREQL QLVQ+AKDNG
Sbjct: 205 VQKFANIEYMRCNPENGFFPDLSSLSRPDIIFFCSPNNPTGAAATREQLVQLVQFAKDNG 264

Query: 267 SIIIYDSAYAMYISGDNPHSIFEIPGAKEVAIETSSYSKYAGFTGVRLGWTVVPKQLLFS 326
           SII+YDSAYAMYISGDNP SIFEIPGAKEVAIETSS+SKYAGFTGVRLGWTV+PKQLLFS
Sbjct: 265 SIIVYDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKQLLFS 324

Query: 327 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTSIIVDTFDS 386
           DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMR VIGFYKENT+IIVDTFDS
Sbjct: 325 DGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPEGLKAMRGVIGFYKENTNIIVDTFDS 384

Query: 387 LGFKVYGGKSAPYVWVHFPGQSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHR 446
           LGFKVYGGKSAPYVWVHFPGQ+SWDVFSEILEKTHVVTT            +RVSAFGHR
Sbjct: 385 LGFKVYGGKSAPYVWVHFPGQNSWDVFSEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHR 444

Query: 447 ENILEACRRFKQLYK 461
           EN+LEACRRFKQLYK
Sbjct: 445 ENVLEACRRFKQLYK 459


>Medtr2g008430.1 | LL-diaminopimelate aminotransferase | HC |
           chr2:1471885-1475400 | 20130731
          Length = 440

 Score =  563 bits (1450), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 263/421 (62%), Positives = 316/421 (75%)

Query: 39  VNICKCVATPQEAETAYKTKVSRNANMGKLQAGYLFPEVARRRNVHLLKYPDAKVISLGI 98
           VN   C  + Q     + TKV RN NM KLQ GYLFPE+ R   +HL KYP A VI LGI
Sbjct: 18  VNRFSCTLSNQRVRIGHSTKVPRNVNMEKLQHGYLFPEIERHELLHLKKYPHANVIDLGI 77

Query: 99  GDTTEPIPEVITSAMAKRSQALSTLEGYSGYGAEQGEKPLRSAIASTFYGDLGIEEDDIF 158
           GDTT+P+P ++TS+M      LST EGY GYG EQGEK LR AIA   Y DLGI+  ++F
Sbjct: 78  GDTTKPLPAIVTSSMVDFVHGLSTAEGYKGYGPEQGEKALRKAIAHKVYKDLGIKPSEVF 137

Query: 159 VSDGAKCDISRLQIVFGSDVKMAVQDPSYPAYVDSSVIMGQTGSFQKDVEKFANIEYMRC 218
           VSDGA+CDISRLQ++ G ++K+AVQDPS+PAY+DSSVI+G  G F   + K+ NIEYM C
Sbjct: 138 VSDGAQCDISRLQLLMGPNLKIAVQDPSFPAYIDSSVIIGHAGKFVDRIGKYENIEYMTC 197

Query: 219 NPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQLTQLVQYAKDNGSIIIYDSAYAMY 278
            P+  FFPDL + SR  +IFFCSPNNPTG AATR+QL QLV +AK NGSIIIYDSAY+ Y
Sbjct: 198 GPQTDFFPDLHTTSRAQLIFFCSPNNPTGHAATRKQLQQLVDFAKVNGSIIIYDSAYSAY 257

Query: 279 ISGDNPHSIFEIPGAKEVAIETSSYSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRI 338
           I+  +P SI+EIPGA+EVAIE SS+SK+AGFTGVRLGWTVVP++LL+S+GFPV  DFNRI
Sbjct: 258 ITDGSPKSIYEIPGAREVAIEVSSFSKFAGFTGVRLGWTVVPEELLYSNGFPVLHDFNRI 317

Query: 339 VCTCFNGASNISQAGGLACLSPEGLKAMRDVIGFYKENTSIIVDTFDSLGFKVYGGKSAP 398
           VCTCFNGASNISQAGGLACLSPEGL A++ ++ +Y EN  I+V    SLG  VYGGK+AP
Sbjct: 318 VCTCFNGASNISQAGGLACLSPEGLNAVQSLVDYYMENARILVTALTSLGLTVYGGKNAP 377

Query: 399 YVWVHFPGQSSWDVFSEILEKTHVVTTXXXXXXXXXXXXIRVSAFGHRENILEACRRFKQ 458
           YVWV FPG  SWDVF+EILE TH++T             IR+SAFG R++I+EA  R K 
Sbjct: 378 YVWVRFPGSKSWDVFAEILENTHIITIPGSGFGPGGEGYIRISAFGQRDSIIEASERLKY 437

Query: 459 L 459
           L
Sbjct: 438 L 438


>Medtr4g011820.1 | aspartate aminotransferase | HC |
           chr4:2998684-2993522 | 20130731
          Length = 396

 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 121/300 (40%), Gaps = 38/300 (12%)

Query: 127 SGYGAEQGEKPLRSAIASTFYGDLGIEEDDIFVSDGAKCDISRLQIVF---GSDVKMAVQ 183
           S YG ++G   LR+A+      +  + +  + V+ GA      L +     G  V M   
Sbjct: 62  SRYGNDEGIPELRAALVKKLRNENNLHKSSVMVTAGANQAFVNLVLTLCDAGDSVVMYA- 120

Query: 184 DPSYPAYVDSSVIMGQTGSFQKDVEKFANIEYMRCNPENGFFPDLSSISR--------PD 235
               P Y +S +    TG          NI     NPE   +PD   + +        P 
Sbjct: 121 ----PYYFNSYMSFQMTG--------ITNILVGPGNPET-LYPDADWLEKVLSESKPVPK 167

Query: 236 IIFFCSPNNPTGAAATREQLTQLVQYAKDNGSIIIYDSAYAMYISGDNPHSIFEIPGAKE 295
           ++   +P NPTG       L ++    +  GS ++ D+ Y  ++  D  H+  E      
Sbjct: 168 LVTVVNPGNPTGTYIPESLLKRIANLCEKAGSWLVVDNTYEYFMFDDLKHTCVE----GN 223

Query: 296 VAIETSSYSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 355
             +   S+SK  G  G R+G+   P ++       +    N  +C     AS ISQ   L
Sbjct: 224 HVVNIFSFSKAYGMMGWRIGYIAYPSEVEGLGSQLLKVQDNIPIC-----ASIISQH--L 276

Query: 356 ACLSPE-GLKAMRDVIGFYKENTSIIVDTFDSLG-FKVYGGKSAPYVWVHFPGQSSWDVF 413
           A  S E G + + + +    +N  I+++   SLG   + GG+ A Y+WV  P    +D F
Sbjct: 277 ALYSLELGPEWVTERVKTLAKNRQIVMEALSSLGEGSIKGGEGAIYLWVKIPSGHGYDDF 336


>Medtr8g091280.1 | aspartate aminotransferase | HC |
           chr8:38106868-38102584 | 20130731
          Length = 475

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 140/325 (43%), Gaps = 38/325 (11%)

Query: 93  VISLGIGDTTEPIPEVITSAMAKRSQALSTLEGYSGYGAEQGEKPLRSAIASTFYGDLGI 152
           VI L  G+     P+  T A+   +   +  EG++ Y    G   +R AI      + G+
Sbjct: 101 VIRLAAGE-----PDFDTPAVIAEAGVNAICEGHTRYTPNAGTLEIRQAICHKLKEENGL 155

Query: 153 E--EDDIFVSDGAKCDISRLQIVFGSD-VKMAVQDPSYPAYVDSSVIMGQTGSFQKDVEK 209
           +   D I V++GAK  I++  I   S   ++ +  P + +Y + + +   T         
Sbjct: 156 DYTPDQIVVTNGAKQSITQAVIAVCSPGDEVIIPAPFWVSYPEMARLADATPVI------ 209

Query: 210 FANIEYMRCNPENGFFPD---LSS--ISRPDIIFFCSPNNPTGAAATREQLTQLVQ-YAK 263
                 +  +  N F  D   L S    +  ++  CSP+NPTG+   +  L ++ +  AK
Sbjct: 210 ------LPTSISNNFLLDPKLLESKITEKSRLLILCSPSNPTGSVYPKYLLEEIAKIVAK 263

Query: 264 DNGSIIIYDSAYAMYISGDNPHSIF-EIPGAKEVAIETSSYSKYAGFTGVRLGWTVVPKQ 322
               ++I D  Y   I     H+ F  +P      +  + +SK    TG RLG+   PK 
Sbjct: 264 HPRLLVISDEIYEHIIYAPATHTSFASLPRMWNRTLTVNGFSKAFAMTGWRLGYIAGPKH 323

Query: 323 LLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSP--EGLKAMRDVIGFYKENTSII 380
            + + G        +I     +G S+ISQ  G+A L     G +A+  ++  ++E    +
Sbjct: 324 FIAAVG--------KIQSQFTSGPSSISQKAGVAALGLGYAGGEAVSTMVKAFRERRDYL 375

Query: 381 VDTFDSL-GFKVYGGKSAPYVWVHF 404
           V +F  + G K+   + A Y+++ F
Sbjct: 376 VKSFSEIDGVKISEPQGAFYLFIDF 400


>Medtr8g061360.1 | tyrosine/nicotianamine family aminotransferase |
           HC | chr8:21128686-21132763 | 20130731
          Length = 417

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 101/240 (42%), Gaps = 30/240 (12%)

Query: 92  KVISLGIGDTTE----PIPEVITSAMAKRSQALSTLEGYSGYGAEQGEKPLRSAIASTFY 147
           +VISLG+GD T     P  +V   A+A    AL +   + GY    G    R+AIA    
Sbjct: 41  RVISLGMGDPTLSTCFPNAKVAEEAVA---DALCS-GNFHGYAPTAGLLQARNAIAKYLS 96

Query: 148 GDLGIE--EDDIFVSDGAK--CDISRLQIVFGSDVKMAVQDPSYPAYVDSSVIMGQTGSF 203
            DL  E   DD+F++ G     D+S + ++      + +  P +P Y           +F
Sbjct: 97  DDLPYELSSDDVFITCGCTQAIDVS-VALLSRPGANILLPRPGFPIY-------ELCAAF 148

Query: 204 QKDVEKFANIEYMRCNPENGFFPDLSSIS-----RPDIIFFCSPNNPTGAAATREQLTQL 258
           ++       + +    PE G+  DL +I          +   +P NP G   T   L ++
Sbjct: 149 RQ-----VEVRHYDLLPEKGWEVDLDAIETLVDQNTVALVIINPGNPCGNVYTYHHLEKI 203

Query: 259 VQYAKDNGSIIIYDSAYAMYISGDNPHSIFEIPGAKEVAIETSSYSKYAGFTGVRLGWTV 318
            + AK  G+I+I D  Y     GDNP     + G+    I   S SK     G RLGW V
Sbjct: 204 AETAKRLGTIVIADEVYGHLAFGDNPFVPMGVFGSTVPVITLGSLSKRWIVPGWRLGWFV 263


>Medtr7g106830.1 | aspartate aminotransferase | HC |
           chr7:43516177-43513083 | 20130731
          Length = 473

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/292 (23%), Positives = 126/292 (43%), Gaps = 33/292 (11%)

Query: 124 EGYSGYGAEQGEKPLRSAIASTFY--GDLGIEEDDIFVSDGAKCDISRLQIVFGS-DVKM 180
           EG + Y    G   LR AI        ++    D + VS+GAK  I++  +   S   ++
Sbjct: 125 EGQTRYTPNAGTLELRQAICHKLKEENEIAYTPDQVIVSNGAKQSIAQAMLAVCSPGDEV 184

Query: 181 AVQDPSYPAYVDSSVIMGQTGSFQKDVEKFANIEYMRCNPENGFFPD---LSSI--SRPD 235
            +  P Y +Y + + +   T               +  +  + F  D   L SI   R  
Sbjct: 185 IIPAPFYVSYPEMARMADATPVI------------LPTSISDNFLLDPKLLESIITERSR 232

Query: 236 IIFFCSPNNPTGAAATREQLTQLVQ-YAKDNGSIIIYDSAYAMYISGDNPHSIF-EIPGA 293
           ++  CSP+NPTG+   ++ L ++    AK    ++I D  Y   I     H+ F  +PG 
Sbjct: 233 VLILCSPSNPTGSVYPKKLLEEIAHIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGM 292

Query: 294 KEVAIETSSYSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAG 353
               +  + +SK    TG RLG+   PK  + + G        +I     +GAS+ISQ  
Sbjct: 293 WGKTLTVNGFSKPFAMTGWRLGYIAGPKHFISACG--------KIQSQFTSGASSISQKA 344

Query: 354 GLACLSP--EGLKAMRDVIGFYKENTSIIVDTFDSL-GFKVYGGKSAPYVWV 402
            +A L     G + +  ++  ++E  + +V +F  + G ++   + A Y+++
Sbjct: 345 AVAALGLGYAGGEVVSTMVKAFRERRNYLVKSFREIDGVEISEPQGAFYLFI 396


>Medtr3g072680.1 | aspartate aminotransferase family protein | HC |
           chr3:32717250-32713023 | 20130731
          Length = 402

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 146/340 (42%), Gaps = 44/340 (12%)

Query: 94  ISLGIGDTTEPIPEVITSAMAKRSQALSTLEGYSGYGAEQGEKPLRSAIASTFYGDLGI- 152
           I+LG G      PE +  A     QA+   +G + Y    G   L  AIA  F  D G+ 
Sbjct: 46  INLGQGFPNFDGPEFVKEAAI---QAIR--DGNNQYARGFGVPDLNIAIAERFKKDTGLI 100

Query: 153 --EEDDIFVSDGAKCDISRLQI-VFGSDVKMAVQDPSYPAYVDSSVIMGQTGSFQKDVEK 209
              +++I V+ G    I+   + +     ++ +  P Y +Y  +  + G           
Sbjct: 101 VDPDNEITVTSGCTEAIAATVLGLINPGEEVILFAPFYDSYGATLSMAG----------- 149

Query: 210 FANIEYMRCNPENGFFP--DL-SSISR-PDIIFFCSPNNPTGAAATREQLTQLVQYAKDN 265
            ANI+ +   P +   P  DL S+IS+    I   +P+NPTG   TRE+L  +     +N
Sbjct: 150 -ANIKSITLRPPDFAVPIDDLKSTISKNTRAILINTPHNPTGKMFTREELDSVASLCIEN 208

Query: 266 GSIIIYDSAYAMYISGDNPH-SIFEIPGAKEVAIETSSYSKYAGFTGVRLGWTVVPKQLL 324
             ++  D  Y   ++ D  H SI  +PG  E  +  +S  K    TG ++GW + P  L+
Sbjct: 209 DVLVFTDEVYHK-LAFDMEHISIATLPGMFERTVTMNSLGKSFSLTGWKVGWAIAPPHLM 267

Query: 325 FSDGFPVAKDFNRIVCTCFNGASNISQAGGLACL-SPEG--LKAMRDVIGFYKENTSIIV 381
           +     V +    I  +     S+  Q G  A L +P+   ++  RD    Y    +I+V
Sbjct: 268 WG----VRQAHTYIAFSI----SHPLQCGAAAALRAPDSYYVELKRD----YIAKRAILV 315

Query: 382 DTFDSLGFKVYGGKSAPYVWV-HFPGQSSWDV-FSEILEK 419
           +   ++GFKV+      +V   H P     DV F E L K
Sbjct: 316 EGLKAVGFKVFPTNGTFFVLADHTPFGHENDVAFCEYLIK 355


>Medtr3g072670.1 | aspartate aminotransferase family protein | HC |
           chr3:32712273-32709423 | 20130731
          Length = 445

 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 17/188 (9%)

Query: 237 IFFCSPNNPTGAAATREQLTQLVQYAKDNGSIIIYDSAYAMYISGDNPH-SIFEIPGAKE 295
           I   +P+NPTG   T E+L  +     +N  ++  D  Y   ++ D  H SI  +PG  E
Sbjct: 223 ILLNTPHNPTGKMFTPEELNTIASLCIENDVLVFSDEVYDK-LAFDMEHISIASLPGMFE 281

Query: 296 VAIETSSYSKYAGFTGVRLGWTVVPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGL 355
             +  +S  K    TG ++GW + P  L +  G   A  F       F  ++ +  A  +
Sbjct: 282 RTVTMNSLGKTFSLTGWKIGWAIAPPHLTW--GVRQAHAF-----LTFATSNPMQWAAAV 334

Query: 356 ACLSPEG--LKAMRDVIGFYKENTSIIVDTFDSLGFKVYGGKSAPYVWV-HFP-GQSSWD 411
           A  +P+    +  RD    Y    SI+V+   ++GFKV+      +V V H P G  +  
Sbjct: 335 ALRAPDSYYTELKRD----YMAKRSILVEGLKAVGFKVFPSSGTYFVVVDHTPFGHENDI 390

Query: 412 VFSEILEK 419
            F E L K
Sbjct: 391 AFCEYLVK 398


>Medtr1g087760.1 | kynurenine-oxoglutarate transaminase-like protein
           | HC | chr1:39273274-39269554 | 20130731
          Length = 403

 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 228 LSSIS-RPDIIFFCSPNNPTGAAATREQLTQLVQYAKDNGSIIIYDSAYAMYISGDNPH- 285
           L+SI+ R   I   SP+NPTG   T+++L  +         + I D  Y      +  H 
Sbjct: 151 LTSITERTKAIILNSPHNPTGKVFTKDELETIAGACCSRNCLAITDEVYEHITYDNQKHI 210

Query: 286 SIFEIPGAKEVAIETSSYSKYAGFTGVRLGW 316
           S+   PG +E  I TSS SK    TG R+GW
Sbjct: 211 SLASFPGMQERTIITSSLSKTFSVTGWRIGW 241