Miyakogusa Predicted Gene
- Lj4g3v0412640.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0412640.2 Non Characterized Hit- tr|I1KQU4|I1KQU4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.3186
PE=,85.59,0,FAD/NAD(P)-binding domain,NULL; SE,Squalene epoxidase;
SQUALENE MONOOXYGENASE,NULL; no description,N,CUFF.48671.2
(202 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-477933... 323 5e-89
Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-477933... 323 7e-89
Medtr4g092640.1 | squalene monooxygenase | HC | chr4:36749132-36... 322 2e-88
Medtr1g017270.1 | squalene monooxygenase | HC | chr1:4770122-476... 319 9e-88
Medtr1g017270.2 | squalene monooxygenase | HC | chr1:4770017-476... 315 2e-86
Medtr6g034955.1 | squalene monooxygenase | HC | chr6:12253385-12... 279 1e-75
Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-124116... 276 9e-75
Medtr5g030880.1 | squalene epoxidase | LC | chr5:13206513-132083... 112 2e-25
Medtr7g064210.1 | GDP-fucose protein O-fucosyltransferase | LC |... 111 5e-25
Medtr2g022940.1 | squalene epoxidase | HC | chr2:7986164-7984237... 96 2e-20
>Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-47793388
| 20130731
Length = 365
Score = 323 bits (829), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 160/202 (79%), Positives = 181/202 (89%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
MA YLKTVVA QVPPELH +FIAA+DKG++RTMP+R MPA P+PTPGALL+GDAFNMRHP
Sbjct: 135 MAKYLKTVVAPQVPPELHAAFIAAVDKGHIRTMPNRSMPADPYPTPGALLMGDAFNMRHP 194
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIVVLRNLL+PL DL++AS++CKYLESFYTLRKP+ASTINTLA AL KV
Sbjct: 195 LTGGGMTVALSDIVVLRNLLKPLRDLNDASSLCKYLESFYTLRKPVASTINTLAGALYKV 254
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
F SPDPA KE++QA DYLSLG +FSEG SLLSGLNP PLS+VLHFFAVAIYGVGRLL
Sbjct: 255 FCASPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPCPLSLVLHFFAVAIYGVGRLL 314
Query: 181 KPFPSPKRIWIGARLISGAACI 202
PFPSPKR+WIG RLI+ A+ I
Sbjct: 315 LPFPSPKRLWIGIRLIASASGI 336
>Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-47793388
| 20130731
Length = 519
Score = 323 bits (828), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 160/202 (79%), Positives = 181/202 (89%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
MA YLKTVVA QVPPELH +FIAA+DKG++RTMP+R MPA P+PTPGALL+GDAFNMRHP
Sbjct: 289 MAKYLKTVVAPQVPPELHAAFIAAVDKGHIRTMPNRSMPADPYPTPGALLMGDAFNMRHP 348
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIVVLRNLL+PL DL++AS++CKYLESFYTLRKP+ASTINTLA AL KV
Sbjct: 349 LTGGGMTVALSDIVVLRNLLKPLRDLNDASSLCKYLESFYTLRKPVASTINTLAGALYKV 408
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
F SPDPA KE++QA DYLSLG +FSEG SLLSGLNP PLS+VLHFFAVAIYGVGRLL
Sbjct: 409 FCASPDPARKEMRQACFDYLSLGGLFSEGPVSLLSGLNPCPLSLVLHFFAVAIYGVGRLL 468
Query: 181 KPFPSPKRIWIGARLISGAACI 202
PFPSPKR+WIG RLI+ A+ I
Sbjct: 469 LPFPSPKRLWIGIRLIASASGI 490
>Medtr4g092640.1 | squalene monooxygenase | HC |
chr4:36749132-36744844 | 20130731
Length = 525
Score = 322 bits (824), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/202 (78%), Positives = 182/202 (90%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
MA YLKTVVA QVPPELH SFIAA+DKGN+R+MP+R MPASP+PTPGALL+GDAFNMRHP
Sbjct: 295 MANYLKTVVAPQVPPELHASFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHP 354
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIV+LRNLL+PL +LH+ASA+C YLESFYTLRKP+ASTINTLA AL KV
Sbjct: 355 LTGGGMTVALSDIVLLRNLLKPLRNLHDASALCIYLESFYTLRKPVASTINTLAGALYKV 414
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
F SPDPA E+++A DYLSLG V S+G +LLSGLNPRPLS+VLHFFAVA++GVGRLL
Sbjct: 415 FCASPDPASIEMRRACFDYLSLGGVCSDGPIALLSGLNPRPLSLVLHFFAVAVFGVGRLL 474
Query: 181 KPFPSPKRIWIGARLISGAACI 202
PFPSPKR+WIGARLISGA+ I
Sbjct: 475 IPFPSPKRMWIGARLISGASGI 496
>Medtr1g017270.1 | squalene monooxygenase | HC |
chr1:4770122-4765355 | 20130731
Length = 526
Score = 319 bits (818), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 178/202 (88%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
M YLKT VA QVPPEL+ +FIAA+DKGN+RTMP+R MPA P PTPGA+L+GDAFNMRHP
Sbjct: 294 MTKYLKTTVAPQVPPELYDAFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHP 353
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIVVLRNLL+P+ DL++A +CKYLESFYTLRKP+ASTINTLA AL KV
Sbjct: 354 LTGGGMTVALSDIVVLRNLLKPMRDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKV 413
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
F SPD A KE++QA DYLSLG +FSEG SLLSGLNPRPLS+VLHFFAVA++GVGRLL
Sbjct: 414 FSASPDEARKEMRQACFDYLSLGGLFSEGPISLLSGLNPRPLSLVLHFFAVAVFGVGRLL 473
Query: 181 KPFPSPKRIWIGARLISGAACI 202
PFPSPKR+WIGARL+SGA+ I
Sbjct: 474 LPFPSPKRVWIGARLLSGASGI 495
>Medtr1g017270.2 | squalene monooxygenase | HC |
chr1:4770017-4765479 | 20130731
Length = 513
Score = 315 bits (807), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/197 (77%), Positives = 174/197 (88%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
M YLKT VA QVPPEL+ +FIAA+DKGN+RTMP+R MPA P PTPGA+L+GDAFNMRHP
Sbjct: 294 MTKYLKTTVAPQVPPELYDAFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHP 353
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIVVLRNLL+P+ DL++A +CKYLESFYTLRKP+ASTINTLA AL KV
Sbjct: 354 LTGGGMTVALSDIVVLRNLLKPMRDLNDAPTLCKYLESFYTLRKPVASTINTLAGALYKV 413
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
F SPD A KE++QA DYLSLG +FSEG SLLSGLNPRPLS+VLHFFAVA++GVGRLL
Sbjct: 414 FSASPDEARKEMRQACFDYLSLGGLFSEGPISLLSGLNPRPLSLVLHFFAVAVFGVGRLL 473
Query: 181 KPFPSPKRIWIGARLIS 197
PFPSPKR+WIGARL+S
Sbjct: 474 LPFPSPKRVWIGARLLS 490
>Medtr6g034955.1 | squalene monooxygenase | HC |
chr6:12253385-12243348 | 20130731
Length = 527
Score = 279 bits (713), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 133/196 (67%), Positives = 163/196 (83%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
M YLKT+VA Q+PPEL+ SFIAA+DK N+R MP+R MPA+P+ TPGAL++GDAFNMRHP
Sbjct: 297 MTHYLKTMVAPQIPPELYNSFIAAVDKRNIRVMPNRSMPATPYVTPGALMMGDAFNMRHP 356
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DIV+LRNLL+PLH+L + S +CKYLE FYTLRKP++ST+NTLA L V
Sbjct: 357 LTGGGMTVALSDIVLLRNLLKPLHNLSDVSTLCKYLEPFYTLRKPLSSTVNTLAGLLHTV 416
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
VSPDPA KE+++A DYLSLG FS+G +LL+GLN RPLS++ HF VA YG+ RL+
Sbjct: 417 ICVSPDPARKEMREACFDYLSLGGDFSDGPIALLAGLNSRPLSLLYHFIGVATYGLVRLM 476
Query: 181 KPFPSPKRIWIGARLI 196
PFPSPKRIW+GAR I
Sbjct: 477 MPFPSPKRIWLGARFI 492
>Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-12411656
| 20130731
Length = 528
Score = 276 bits (706), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 133/199 (66%), Positives = 164/199 (82%)
Query: 1 MALYLKTVVASQVPPELHTSFIAAIDKGNMRTMPSRFMPASPHPTPGALLIGDAFNMRHP 60
M +LK V+A Q+PPEL+ SFIAA+DKGN+R+MP+R MPASP+ TPGAL++GDAFNMRHP
Sbjct: 297 MTHFLKIVIAPQIPPELYNSFIAAVDKGNIRSMPNRSMPASPYLTPGALMMGDAFNMRHP 356
Query: 61 LTGGGMTVALADIVVLRNLLRPLHDLHNASAICKYLESFYTLRKPMASTINTLATALPKV 120
LTGGGMTVAL+DI +LRNLL+PLH+LH+ASA+CKYLESFYT RK +STINTLA L +
Sbjct: 357 LTGGGMTVALSDIALLRNLLKPLHNLHDASALCKYLESFYTFRKSTSSTINTLAGLLYTI 416
Query: 121 FRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVVLHFFAVAIYGVGRLL 180
SPDPA KE+++A +YLSLG VFS+ +LL+GLN +++ HF AVA YGVGRL+
Sbjct: 417 CIASPDPARKEMREACFNYLSLGGVFSDEPIALLAGLNSSSSTLLYHFIAVAAYGVGRLM 476
Query: 181 KPFPSPKRIWIGARLISGA 199
PFPSPKRIWI ARL+S A
Sbjct: 477 MPFPSPKRIWIAARLLSVA 495
>Medtr5g030880.1 | squalene epoxidase | LC | chr5:13206513-13208398
| 20130731
Length = 286
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/85 (68%), Positives = 67/85 (78%)
Query: 106 MASTINTLATALPKVFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSVV 165
+ STINTLA AL KVF SPDPA E+ +A +YLSLG V S G +LLS LNPRPLS+V
Sbjct: 187 VTSTINTLAGALYKVFCASPDPASIEMHRACFNYLSLGGVCSYGPIALLSSLNPRPLSLV 246
Query: 166 LHFFAVAIYGVGRLLKPFPSPKRIW 190
LHFF VA+YGVGRLL PFPSPKR++
Sbjct: 247 LHFFVVAVYGVGRLLIPFPSPKRMY 271
>Medtr7g064210.1 | GDP-fucose protein O-fucosyltransferase | LC |
chr7:23482736-23477844 | 20130731
Length = 415
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 64/83 (77%)
Query: 105 PMASTINTLATALPKVFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSV 164
P+ASTINTL L KVF SPDPA E+ DYLSLG V S+G +LLSGLN RPLS+
Sbjct: 333 PVASTINTLVGTLHKVFGASPDPACIEMHPTCFDYLSLGGVCSDGPIALLSGLNSRPLSL 392
Query: 165 VLHFFAVAIYGVGRLLKPFPSPK 187
VLHFFA+A+YGVGRLL PFPSPK
Sbjct: 393 VLHFFALAVYGVGRLLIPFPSPK 415
>Medtr2g022940.1 | squalene epoxidase | HC | chr2:7986164-7984237 |
20130731
Length = 256
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 57/70 (81%)
Query: 105 PMASTINTLATALPKVFRVSPDPAMKELQQAFLDYLSLGRVFSEGLASLLSGLNPRPLSV 164
P+ASTINTLA AL KVF SPDPA E+ +A DYLSLG V S+G +LLSGLNPRPLS+
Sbjct: 168 PVASTINTLAGALYKVFCASPDPASIEMLRACFDYLSLGGVCSDGPIALLSGLNPRPLSL 227
Query: 165 VLHFFAVAIY 174
VLHFFAVA+Y
Sbjct: 228 VLHFFAVAVY 237