Miyakogusa Predicted Gene

Lj4g3v0412640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0412640.1 Non Characterized Hit- tr|I1KL88|I1KL88_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.56390
PE,74.19,0,seg,NULL; DAO,FAD dependent oxidoreductase; no
description,NULL; SQUALENE MONOOXYGENASE,NULL; FAD/NA,CUFF.48671.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g092640.1 | squalene monooxygenase | HC | chr4:36749132-36...   491   e-139
Medtr6g034955.1 | squalene monooxygenase | HC | chr6:12253385-12...   439   e-123
Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-124116...   434   e-122
Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-477933...   405   e-113
Medtr1g017270.1 | squalene monooxygenase | HC | chr1:4770122-476...   398   e-111
Medtr1g017270.2 | squalene monooxygenase | HC | chr1:4770017-476...   398   e-111
Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-477933...   229   2e-60

>Medtr4g092640.1 | squalene monooxygenase | HC |
           chr4:36749132-36744844 | 20130731
          Length = 525

 Score =  491 bits (1264), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/320 (76%), Positives = 269/320 (84%), Gaps = 3/320 (0%)

Query: 1   MDYEFIPGGILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTSENGICPQNGEG 60
           MDY++I GGILACSLA VF +Y F EK+K T  SSM VKS NG AKT+SENGIC Q   G
Sbjct: 1   MDYQYILGGILACSLAFVFVVYGFGEKKK-TGSSSMDVKS-NGYAKTSSENGICSQEIVG 58

Query: 61  STDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLED 120
            TD            LAYTLG+DGRRVHVIERDL EPDRIVGE+L PGGYLKL+ELGLED
Sbjct: 59  ETDIIIVGAGVAGAALAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLLELGLED 118

Query: 121 CLDEIDAQQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALSLPNVK 180
           C+DEIDAQ++FGYA YKDGK  KLSYPLEKFDS VSG+SFHNGRFIQRMR+KA ++P VK
Sbjct: 119 CVDEIDAQRVFGYALYKDGKNTKLSYPLEKFDSDVSGRSFHNGRFIQRMREKASTIPTVK 178

Query: 181 LEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEVPSH 240
           LEQGTVTSL+EE GTIKGV+YK KSGQE  AKAPLTIVCDGCFSNLRRSLC PKVEVPSH
Sbjct: 179 LEQGTVTSLLEENGTIKGVNYKNKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVEVPSH 238

Query: 241 FVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVEL-HGQKLPSIGNGEMALY 299
           FV L+LENCNLP+ANHGH+I GDPS IL YPISSTE+RC V++  GQKLPS+GNGEMA Y
Sbjct: 239 FVGLILENCNLPHANHGHVILGDPSPILFYPISSTEIRCLVDVPTGQKLPSLGNGEMANY 298

Query: 300 LKTVVASQVPPELHTSFIAA 319
           LKTVVA QVPPELH SFIAA
Sbjct: 299 LKTVVAPQVPPELHASFIAA 318


>Medtr6g034955.1 | squalene monooxygenase | HC |
           chr6:12253385-12243348 | 20130731
          Length = 527

 Score =  439 bits (1130), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/325 (68%), Positives = 255/325 (78%), Gaps = 11/325 (3%)

Query: 1   MDYEFIPGG-ILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTS-ENGICP--- 55
           MDY++I GG ILACSLA VF LY   EK+KA       + SS+   KT   +NG C    
Sbjct: 1   MDYQYILGGEILACSLAFVFALYIVVEKKKAK-----EIDSSSTYLKTNGPKNGTCSSLF 55

Query: 56  QNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIE 115
           Q   G TD            LAYTLG+DGRRVHVIERDLNEPDRIVGE+L PGGYLKL+E
Sbjct: 56  QQAAGGTDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLNEPDRIVGELLQPGGYLKLLE 115

Query: 116 LGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALS 175
           LGLEDC+DEIDAQ++FGYA YKDGK  KLSYPLE F++ VSG+SFHNGRFIQ+MR+KA  
Sbjct: 116 LGLEDCVDEIDAQRVFGYALYKDGKNIKLSYPLENFNADVSGRSFHNGRFIQKMREKASL 175

Query: 176 LPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKV 235
           LPNVKLEQGTVTSLVE  G+I GV+YK KSGQE   KAPLTIVCDGCFSNLR SLC PKV
Sbjct: 176 LPNVKLEQGTVTSLVEINGSIIGVNYKNKSGQEFNEKAPLTIVCDGCFSNLRSSLCKPKV 235

Query: 236 EVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVEL-HGQKLPSIGNG 294
           EVPS+FV LVLENCNLPYANHGH+I GDPS +L YPISSTE+RCFV++  G++LPS+ NG
Sbjct: 236 EVPSYFVGLVLENCNLPYANHGHVILGDPSPLLFYPISSTEIRCFVDVPAGKRLPSLVNG 295

Query: 295 EMALYLKTVVASQVPPELHTSFIAA 319
           EM  YLKT+VA Q+PPEL+ SFIAA
Sbjct: 296 EMTHYLKTMVAPQIPPELYNSFIAA 320


>Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-12411656
           | 20130731
          Length = 528

 Score =  434 bits (1115), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/325 (67%), Positives = 252/325 (77%), Gaps = 11/325 (3%)

Query: 1   MDYEFIPGG-ILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTS-ENGICP--- 55
           M+Y++I GG  LACS A V+ LY   EK+K        + SS+   KT   +NGIC    
Sbjct: 1   MNYQYILGGEFLACSFAFVYVLYTLVEKKKPK-----EIASSSTYLKTNGPKNGICSSLL 55

Query: 56  QNGEGSTDXXXXXXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIE 115
           Q   G TD            LAYTLG+DGRRVHVIERDL+EPDRIVGE+L PGGYLKL+E
Sbjct: 56  QEAAGGTDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLLE 115

Query: 116 LGLEDCLDEIDAQQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALS 175
           LGLEDC+D IDAQ++FGYA YKDGK  KLSYPLE F+  VSG+SFHNGRFI++MR+KA  
Sbjct: 116 LGLEDCVDGIDAQRVFGYALYKDGKNIKLSYPLENFNVDVSGRSFHNGRFIKKMREKASY 175

Query: 176 LPNVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKV 235
           LPNVKLEQGTVTSLVE+ G+I GV+YK KSGQE   KAPLTIVCDGCFSNLR SLC PKV
Sbjct: 176 LPNVKLEQGTVTSLVEKNGSIVGVNYKNKSGQEFTEKAPLTIVCDGCFSNLRSSLCKPKV 235

Query: 236 EVPSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVEL-HGQKLPSIGNG 294
           EVPS+FV LVLENCNLPYANHGH+I GDPS IL YPISSTE+RCFV++  G+KLPSIGNG
Sbjct: 236 EVPSYFVGLVLENCNLPYANHGHVILGDPSPILFYPISSTEIRCFVDVPTGRKLPSIGNG 295

Query: 295 EMALYLKTVVASQVPPELHTSFIAA 319
           EM  +LK V+A Q+PPEL+ SFIAA
Sbjct: 296 EMTHFLKIVIAPQIPPELYNSFIAA 320


>Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-47793388
           | 20130731
          Length = 519

 Score =  405 bits (1042), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 202/311 (64%), Positives = 234/311 (75%), Gaps = 6/311 (1%)

Query: 9   GILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTSENGICPQNGEGSTDXXXXX 68
           G + C+L  +  LY F   RK  + S+     +    +  S       N  G  D     
Sbjct: 8   GWITCTLITLAALYNFLFSRKNHSDSTTTENITTATGECRS------FNPNGDVDIIIVG 61

Query: 69  XXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLEDCLDEIDAQ 128
                  LAYTLG+DGRRV +IERDLNEPDRIVGE+L PGGYLKLIELGL+DC+++IDAQ
Sbjct: 62  AGVAGSALAYTLGKDGRRVLIIERDLNEPDRIVGELLQPGGYLKLIELGLDDCVEKIDAQ 121

Query: 129 QIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALSLPNVKLEQGTVTS 188
           ++FGYA +KDGK  +LSYPLEKF S ++G+SFHNGRFI RMR+KA SLPNV+LEQGTVTS
Sbjct: 122 KVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFILRMREKAASLPNVRLEQGTVTS 181

Query: 189 LVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEVPSHFVALVLEN 248
           L+EE GTIKGV YKTK  QE  A APLTIVCDGCFSNLRRSLC PKVEVPS FV LVLEN
Sbjct: 182 LLEENGTIKGVQYKTKDAQEFSACAPLTIVCDGCFSNLRRSLCNPKVEVPSCFVGLVLEN 241

Query: 249 CNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMALYLKTVVASQV 308
           C LP A+HGH+I GDPS +L YPISSTE+RC V++ GQK+PSI NGEMA YLKTVVA QV
Sbjct: 242 CELPCADHGHVILGDPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMAKYLKTVVAPQV 301

Query: 309 PPELHTSFIAA 319
           PPELH +FIAA
Sbjct: 302 PPELHAAFIAA 312


>Medtr1g017270.1 | squalene monooxygenase | HC |
           chr1:4770122-4765355 | 20130731
          Length = 526

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/312 (63%), Positives = 228/312 (73%), Gaps = 1/312 (0%)

Query: 8   GGILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTSENGICPQNGEGSTDXXXX 67
           G IL+  L+L F LY      K     +  V        +T    I      G  D    
Sbjct: 7   GWILSSVLSL-FALYNLIFAGKKNYDVNEKVNQREDSVTSTDAGEIKSDKLNGDADVIIV 65

Query: 68  XXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLEDCLDEIDA 127
                   LA+TLG+DGRRVH+IERDL+EPDRIVGE+L PGGYLKL+ELGL+DC+D IDA
Sbjct: 66  GAGIAGAALAHTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDA 125

Query: 128 QQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALSLPNVKLEQGTVT 187
           Q++FGYA +KDGK  +LSYPLEKF S VSG+SFHNGRFIQRMR+KA SLPNV +EQGTV 
Sbjct: 126 QRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVI 185

Query: 188 SLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEVPSHFVALVLE 247
           SL+EEKGTIKGV YK K GQ L A APLTIVCDGCFSNLRRSLC PKV+ PS FV L+LE
Sbjct: 186 SLLEEKGTIKGVQYKNKDGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILE 245

Query: 248 NCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMALYLKTVVASQ 307
           NC LP ANHGH+I GDPS IL YPISSTE+RC V++ G K+PSI NG+M  YLKT VA Q
Sbjct: 246 NCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTKYLKTTVAPQ 305

Query: 308 VPPELHTSFIAA 319
           VPPEL+ +FIAA
Sbjct: 306 VPPELYDAFIAA 317


>Medtr1g017270.2 | squalene monooxygenase | HC |
           chr1:4770017-4765479 | 20130731
          Length = 513

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 198/312 (63%), Positives = 228/312 (73%), Gaps = 1/312 (0%)

Query: 8   GGILACSLALVFGLYQFAEKRKATNPSSMHVKSSNGCAKTTSENGICPQNGEGSTDXXXX 67
           G IL+  L+L F LY      K     +  V        +T    I      G  D    
Sbjct: 7   GWILSSVLSL-FALYNLIFAGKKNYDVNEKVNQREDSVTSTDAGEIKSDKLNGDADVIIV 65

Query: 68  XXXXXXXXLAYTLGEDGRRVHVIERDLNEPDRIVGEVLIPGGYLKLIELGLEDCLDEIDA 127
                   LA+TLG+DGRRVH+IERDL+EPDRIVGE+L PGGYLKL+ELGL+DC+D IDA
Sbjct: 66  GAGIAGAALAHTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDA 125

Query: 128 QQIFGYAFYKDGKVAKLSYPLEKFDSHVSGKSFHNGRFIQRMRKKALSLPNVKLEQGTVT 187
           Q++FGYA +KDGK  +LSYPLEKF S VSG+SFHNGRFIQRMR+KA SLPNV +EQGTV 
Sbjct: 126 QRVFGYALFKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVI 185

Query: 188 SLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEVPSHFVALVLE 247
           SL+EEKGTIKGV YK K GQ L A APLTIVCDGCFSNLRRSLC PKV+ PS FV L+LE
Sbjct: 186 SLLEEKGTIKGVQYKNKDGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILE 245

Query: 248 NCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMALYLKTVVASQ 307
           NC LP ANHGH+I GDPS IL YPISSTE+RC V++ G K+PSI NG+M  YLKT VA Q
Sbjct: 246 NCELPCANHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTKYLKTTVAPQ 305

Query: 308 VPPELHTSFIAA 319
           VPPEL+ +FIAA
Sbjct: 306 VPPELYDAFIAA 317


>Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-47793388
           | 20130731
          Length = 365

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/142 (77%), Positives = 121/142 (85%)

Query: 178 NVKLEQGTVTSLVEEKGTIKGVHYKTKSGQELIAKAPLTIVCDGCFSNLRRSLCTPKVEV 237
           +V+LEQGTVTSL+EE GTIKGV YKTK  QE  A APLTIVCDGCFSNLRRSLC PKVEV
Sbjct: 17  SVRLEQGTVTSLLEENGTIKGVQYKTKDAQEFSACAPLTIVCDGCFSNLRRSLCNPKVEV 76

Query: 238 PSHFVALVLENCNLPYANHGHIIFGDPSTILSYPISSTEVRCFVELHGQKLPSIGNGEMA 297
           PS FV LVLENC LP A+HGH+I GDPS +L YPISSTE+RC V++ GQK+PSI NGEMA
Sbjct: 77  PSCFVGLVLENCELPCADHGHVILGDPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMA 136

Query: 298 LYLKTVVASQVPPELHTSFIAA 319
            YLKTVVA QVPPELH +FIAA
Sbjct: 137 KYLKTVVAPQVPPELHAAFIAA 158