Miyakogusa Predicted Gene
- Lj4g3v0388240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0388240.1 Non Characterized Hit- tr|G7JV29|G7JV29_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,53.41,8e-17,zf-met,NULL; ZINC_FINGER_C2H2_1,Zinc finger,
C2H2; C2H2 and C2HC zinc fingers,NULL; U1-like zinc fin,CUFF.47042.1
(178 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698... 147 4e-36
Medtr4g093280.1 | TB2/DP1, HVA22 family protein | LC | chr4:3699... 100 5e-22
Medtr4g093260.3 | TB2/DP1, HVA22 family protein | LC | chr4:3698... 89 2e-18
Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC | chr4:3698... 88 4e-18
Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC | chr4:3698... 88 4e-18
Medtr4g093270.1 | TB2/DP1, HVA22 family protein | LC | chr4:3700... 79 2e-15
Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC | c... 48 6e-06
>Medtr4g093510.1 | TB2/DP1, HVA22 family protein | LC |
chr4:36982943-36978372 | 20130731
Length = 522
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 110/175 (62%), Gaps = 4/175 (2%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSSTHKEVQKEWTCALCQVTVSREEDLNS 60
MP +A +Q ASS VE KG A +AGEE+ SST KE+Q+EW CALC VT S + LNS
Sbjct: 345 MPKIASSQNASSATVETKGTAKSDKAGEEYLKSSTQKELQEEWPCALCSVTTSSKITLNS 404
Query: 61 HLQGRKHRAADEAIKAKTQSVPQKLRN-FLHKEEWKQKTISNQLSYNAKNGESIVNIDQK 119
HL GRKHRA+ EA + + N + KEE KQK +SN+ + N K+G++I+ K
Sbjct: 405 HLNGRKHRASCEAALKAKKQAALQKLNIYQSKEEVKQKDVSNKFNSNVKSGDNILKKGLK 464
Query: 120 GNVVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCSTEFDLACHLNGRKHLANI 174
G VVMD KV QKN EPVR + SK C C+V +E ++ H+NG+KHLA
Sbjct: 465 GTVVMDDKV---QKNQAEPVRTHNSKSICRVCDVVLLSEANVVSHMNGKKHLAKF 516
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 100/218 (45%), Gaps = 55/218 (25%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSSTHKEVQKEWTCALCQVTVSREEDLNS 60
M + P+Q ASS VE KG A RAG E P SST KEVQ+EWTCA+C VT SRE+DL S
Sbjct: 207 MLKIRPSQNASSVTVETKGTAESERAGGEVPRSSTQKEVQREWTCAICLVTTSREKDLIS 266
Query: 61 HLQGRKHRAADEAIKAKTQSVPQKLRNFLHKEEWKQKTI-SNQLSYNAKNGESI------ 113
HL GRKHR EA+ +K Q QK + E KTI ++ KNGE
Sbjct: 267 HLNGRKHRDTSEALISKKQPTRQKQKG---AEATTNKTIATDNKKIPKKNGERFQTEKKN 323
Query: 114 -----------VNIDQKGNVVM---------------------------DHKVRELQKNL 135
+++ ++ N VM ++ QK L
Sbjct: 324 IKYLEAIDKKEISVTKQDNPVMPKIASSQNASSATVETKGTAKSDKAGEEYLKSSTQKEL 383
Query: 136 YEPVRMNYSKLRCEACNVCCSTEFDLACHLNGRKHLAN 173
E + C C+V S++ L HLNGRKH A+
Sbjct: 384 QE-------EWPCALCSVTTSSKITLNSHLNGRKHRAS 414
>Medtr4g093280.1 | TB2/DP1, HVA22 family protein | LC |
chr4:36998363-36995528 | 20130731
Length = 469
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 82/172 (47%), Gaps = 49/172 (28%)
Query: 3 SLAPTQIASSTIVEMKGIAGKGRAGEEFPWSSTHKEVQKEWTCALCQVTVSREEDLNSHL 62
++ +Q ASS I+E KG A A E P SST K VQKEWTCALC VTV+ E+ L SHL
Sbjct: 345 NIVASQTASSAIIETKGTAESVTACGEVPQSSTQKAVQKEWTCALCLVTVTCEKTLISHL 404
Query: 63 QGRKHRAADEAIKAKTQSVPQKLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKGNV 122
+GR+HR E +KAK Q Q
Sbjct: 405 RGRRHRETMEVLKAKKQPTLQ--------------------------------------- 425
Query: 123 VMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCSTEFDLACHLNGRKHLANI 174
KNL EP+RM SK+ C+ CN+ +E +A H+ G KHL+N+
Sbjct: 426 ----------KNLSEPIRMINSKIICKVCNIMLPSEDYVASHIKGWKHLSNV 467
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSSTHKEVQKEWTCALCQVTVSREEDLNS 60
+P + P+Q ASS VE KG A RAG EFP T KE+QK+WTCALC VT + +DLNS
Sbjct: 207 IPEIGPSQNASSVTVETKGTAESDRAGGEFPKDCTQKEMQKKWTCALCLVTTTSNKDLNS 266
Query: 61 HLQGRKHRAADEAIK-AKTQSVPQKLRN 87
HL GRKHR EA+ A Q QK ++
Sbjct: 267 HLTGRKHRDTIEALSIANKQPTLQKQKD 294
>Medtr4g093260.3 | TB2/DP1, HVA22 family protein | LC |
chr4:36988810-36983804 | 20130731
Length = 553
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/101 (55%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Query: 27 GEEFPWSST--HKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRAA-DEAIKAKTQSVPQ 83
G E P SST KEVQKEW CALC VTV E+ LNSHL GRKHRAA + A+KAK
Sbjct: 366 GVEVPQSSTIAQKEVQKEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAK------ 419
Query: 84 KLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKGNVVM 124
KL+ + KEE KQ+ SN+L+ + +NG IVN KG V M
Sbjct: 420 KLKIYKAKEEVKQENFSNKLNSDVENGGGIVNNRLKGPVRM 460
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 17/187 (9%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSST--HKEVQKEWTCALCQVTVSREEDL 58
+P + P+Q AS VE A + AG E P SST KEVQKEWTCALC VT + E+ L
Sbjct: 103 LPKIGPSQNASLATVETNVTAERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKIL 162
Query: 59 NSHLQGRKHRAA-----DEAIKAKTQSVPQKLRNFLHKEEWKQ-----KTISNQLSYNAK 108
NSHL G+KHRAA D + K+ L E K+ + I
Sbjct: 163 NSHLSGKKHRAALQRQKDAETNGERILTEHKIIKDLDAVEKKEIHETKQDIPVIPKIGPS 222
Query: 109 NGESIVNIDQKGNVVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCST-EFDLACHLNG 167
ES +++ KG V D E+ ++ ++M+ K R C++C +T E L +G
Sbjct: 223 QNESSASVETKGTVEGDRAGGEVPQSSS--MQMDLQKDRT--CDLCLTTAEEILNARFSG 278
Query: 168 RKHLANI 174
RKH A +
Sbjct: 279 RKHSAAL 285
>Medtr4g093260.1 | TB2/DP1, HVA22 family protein | LC |
chr4:36989578-36983804 | 20130731
Length = 655
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 9/102 (8%)
Query: 26 AGEEFPWSST--HKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRAA-DEAIKAKTQSVP 82
G E P SST KEVQKEW CALC VTV E+ LNSHL GRKHRAA + A+KAK
Sbjct: 467 VGVEVPQSSTIAQKEVQKEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAK----- 521
Query: 83 QKLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKGNVVM 124
KL+ + KEE KQ+ SN+L+ + +NG IVN KG V M
Sbjct: 522 -KLKIYKAKEEVKQENFSNKLNSDVENGGGIVNNRLKGPVRM 562
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 17/187 (9%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSST--HKEVQKEWTCALCQVTVSREEDL 58
+P + P+Q AS VE A + AG E P SST KEVQKEWTCALC VT + E+ L
Sbjct: 205 LPKIGPSQNASLATVETNVTAERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKIL 264
Query: 59 NSHLQGRKHRAA-----DEAIKAKTQSVPQKLRNFLHKEEWKQ-----KTISNQLSYNAK 108
NSHL G+KHRAA D + K+ L E K+ + I
Sbjct: 265 NSHLSGKKHRAALQRQKDAETNGERILTEHKIIKDLDAVEKKEIHETKQDIPVIPKIGPS 324
Query: 109 NGESIVNIDQKGNVVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCST-EFDLACHLNG 167
ES +++ KG V D E+ ++ ++M+ K R C++C +T E L +G
Sbjct: 325 QNESSASVETKGTVEGDRAGGEVPQS--SSMQMDLQKDR--TCDLCLTTAEEILNARFSG 380
Query: 168 RKHLANI 174
RKH A +
Sbjct: 381 RKHSAAL 387
>Medtr4g093260.2 | TB2/DP1, HVA22 family protein | LC |
chr4:36989505-36983804 | 20130731
Length = 646
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/102 (54%), Positives = 66/102 (64%), Gaps = 9/102 (8%)
Query: 26 AGEEFPWSST--HKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRAA-DEAIKAKTQSVP 82
G E P SST KEVQKEW CALC VTV E+ LNSHL GRKHRAA + A+KAK
Sbjct: 458 VGVEVPQSSTIAQKEVQKEWACALCLVTVPCEKTLNSHLNGRKHRAACEAALKAK----- 512
Query: 83 QKLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKGNVVM 124
KL+ + KEE KQ+ SN+L+ + +NG IVN KG V M
Sbjct: 513 -KLKIYKAKEEVKQENFSNKLNSDVENGGGIVNNRLKGPVRM 553
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 92/187 (49%), Gaps = 17/187 (9%)
Query: 1 MPSLAPTQIASSTIVEMKGIAGKGRAGEEFPWSST--HKEVQKEWTCALCQVTVSREEDL 58
+P + P+Q AS VE A + AG E P SST KEVQKEWTCALC VT + E+ L
Sbjct: 196 LPKIGPSQNASLATVETNVTAERNSAGGEVPQSSTSTQKEVQKEWTCALCLVTTTSEKIL 255
Query: 59 NSHLQGRKHRAA-----DEAIKAKTQSVPQKLRNFLHKEEWKQ-----KTISNQLSYNAK 108
NSHL G+KHRAA D + K+ L E K+ + I
Sbjct: 256 NSHLSGKKHRAALQRQKDAETNGERILTEHKIIKDLDAVEKKEIHETKQDIPVIPKIGPS 315
Query: 109 NGESIVNIDQKGNVVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCST-EFDLACHLNG 167
ES +++ KG V D E+ ++ ++M+ K R C++C +T E L +G
Sbjct: 316 QNESSASVETKGTVEGDRAGGEVPQS--SSMQMDLQKDR--TCDLCLTTAEEILNARFSG 371
Query: 168 RKHLANI 174
RKH A +
Sbjct: 372 RKHSAAL 378
>Medtr4g093270.1 | TB2/DP1, HVA22 family protein | LC |
chr4:37002156-37000248 | 20130731
Length = 324
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 77/173 (44%), Gaps = 57/173 (32%)
Query: 4 LAPTQIASSTIVEMKGIAGKGRAGEEFPWSS-THKEVQKEWTCALCQVTVSREEDLNSHL 62
+ +Q +SS+I E KG A A E P SS T KEV K+WTCALC VT S E+ LNSHL
Sbjct: 205 IVASQKSSSSIEETKGTAESDTASGELPQSSATQKEVPKKWTCALCIVTTSSEKTLNSHL 264
Query: 63 QGRKHRAADE-AIKAKTQSVPQKLRNFLHKEEWKQKTISNQLSYNAKNGESIVNIDQKGN 121
GRKH+A E A+KA LH+E
Sbjct: 265 NGRKHKANCELALKAIN----------LHEE----------------------------- 285
Query: 122 VVMDHKVRELQKNLYEPVRMNYSKLRCEACNVCCSTEFDLACHLNGRKHLANI 174
P R SK+ C CNV S+E +A HL G+KHL+ I
Sbjct: 286 ----------------PFRRINSKIICIVCNVLISSEEYMASHLIGKKHLSKI 322
>Medtr4g129690.1 | C2H2 type zf-met: zinc-finger protein | LC |
chr4:54056214-54059208 | 20130731
Length = 369
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 35 THKEVQKEWTCALCQVTVSREEDLNSHLQGRKHRA 69
++K+++KEW+C LCQ+ S E LN HL G+KH+A
Sbjct: 140 SNKKLKKEWSCELCQIKASSENGLNDHLNGKKHKA 174