Miyakogusa Predicted Gene

Lj4g3v0385800.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0385800.1 Non Characterized Hit- tr|I1KL47|I1KL47_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,95.05,0,GDI,GDP
dissociation inhibitor; RAB GDP-DISSOCIATION INHIBITOR,NULL; no
description,NULL; RABGDIREP,,CUFF.47022.1
         (203 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g093980.1 | GDP dissociation inhibitor | HC | chr4:3715697...   401   e-112
Medtr8g088620.1 | GDP dissociation inhibitor | HC | chr8:3679563...   350   5e-97
Medtr5g024150.1 | GDP dissociation inhibitor | HC | chr5:9686496...    72   4e-13

>Medtr4g093980.1 | GDP dissociation inhibitor | HC |
           chr4:37156974-37160967 | 20130731
          Length = 445

 Score =  401 bits (1031), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 193/203 (95%), Positives = 198/203 (97%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF
Sbjct: 75  MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRARKFFIYVQDYE +DPKSHEGLDLNQVTARQLISKYGLEDDT+DFIGHALALHLDD
Sbjct: 135 EKRRARKFFIYVQDYEANDPKSHEGLDLNQVTARQLISKYGLEDDTVDFIGHALALHLDD 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
           SYLD PAKDFV+R+K YAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 SYLDKPAKDFVDRVKTYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD  GKAIGVTS+GETAK
Sbjct: 255 ECKVEFDGDGKAIGVTSDGETAK 277


>Medtr8g088620.1 | GDP dissociation inhibitor | HC |
           chr8:36795637-36789097 | 20130731
          Length = 444

 Score =  350 bits (898), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 164/203 (80%), Positives = 186/203 (91%)

Query: 1   MIPKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGKIYKVPATDVEALKSPLMGLF 60
           M PKF+MANG LVRVLIHTDVTKYL FKAVDGSFV+NK K++KVP+ D+EALKSPLMG+F
Sbjct: 75  MNPKFIMANGTLVRVLIHTDVTKYLYFKAVDGSFVFNKAKVHKVPSNDMEALKSPLMGIF 134

Query: 61  EKRRARKFFIYVQDYEVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHLDD 120
           EKRRARKFFIYVQDY  SDPK+H+G+DL +VT ++LI+K+GL+D+T+DFIGHALALH DD
Sbjct: 135 EKRRARKFFIYVQDYNESDPKTHDGMDLTRVTTKELIAKFGLDDNTVDFIGHALALHRDD 194

Query: 121 SYLDTPAKDFVERIKVYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 180
            YL+ PA D V+R+K+YAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP
Sbjct: 195 RYLNEPALDTVKRMKLYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKP 254

Query: 181 ECKVEFDSAGKAIGVTSEGETAK 203
           ECKVEFD  GK IGVTSEGETAK
Sbjct: 255 ECKVEFDDQGKVIGVTSEGETAK 277


>Medtr5g024150.1 | GDP dissociation inhibitor | HC |
           chr5:9686496-9680048 | 20130731
          Length = 552

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 14/189 (7%)

Query: 3   PKFMMANGALVRVLIHTDVTKYLNFKAVDGSFVYNKGK-IYKVPATDVEALKSPLMGLFE 61
           P+ + +    + +L+ +   +YL FK +D S VYN  + +  VP +     +   + L E
Sbjct: 130 PRALFSADKTIDLLLKSGAAQYLEFKGIDASLVYNTNEGLVNVPDSRGAIFRDKNLSLKE 189

Query: 62  KRRARKFFIYVQDY---EVSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHL 118
           K +  KFF  VQ +      +  S E ++ + V+    + K GL       + +A+A+  
Sbjct: 190 KNQLMKFFKLVQQHLGGNEDEKISEEDMESSFVS---YLEKLGLPSKIKAILLYAIAMVD 246

Query: 119 DDSYLDTPAKDF------VERIKVYAESLARFQGG-SPYIYPLYGLGELPQAFARLSAVY 171
            D       KD       ++R+  Y+ S+ R+       +YP+YG GELPQAF R +AV 
Sbjct: 247 FDQENGGVCKDLLKTKDGIDRLAQYSSSVGRYPNAPGALLYPIYGEGELPQAFCRRAAVK 306

Query: 172 GGTYMLNKP 180
           G  Y+L  P
Sbjct: 307 GCIYVLRMP 315