Miyakogusa Predicted Gene

Lj4g3v0363530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0363530.1 tr|B4WJS9|B4WJS9_9SYNE 1,4-dihydroxy-2-naphthoate
phytyltransferase OS=Synechococcus sp. PCC 7335
GN,36.13,9e-19,UbiA,UbiA prenyltransferase family; SUBFAMILY NOT
NAMED,NULL; 1,4-DIHYDROXY-2-NAPHTHOATE OCTAPRENYLT,CUFF.47013.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094100.1 | 1,4-dihydroxy-2-naphthoate octaprenyltransfera...   236   1e-62

>Medtr4g094100.1 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase
           | HC | chr4:37286075-37282739 | 20130731
          Length = 396

 Score =  236 bits (603), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 142/240 (59%), Positives = 151/240 (62%), Gaps = 34/240 (14%)

Query: 1   MAATSCNLTHASGLKKLNEHHLHMKSYFKGKIPSTLLPFSSTGKMKSSKFKVEAVNGNWF 60
           MAAT CNLTHAS    LN    + + Y            S   K  +S  KV        
Sbjct: 1   MAATCCNLTHASPF--LNHQLFYFQRYHL---------VSKRSKCNTSMEKV-------- 41

Query: 61  CETGLKRNRGLLQVQRLDQ-YPFVACASGAXXXXXXXXXXXXXXXXK-------EILIWR 112
               L R     QVQR D  Y  V  A GA                +       E LIWR
Sbjct: 42  ----LHRR---FQVQRRDHHYIHVRYAGGAELSSSSSSSIEKNVGEEIQEDISMETLIWR 94

Query: 113 AIKLPIYSVAFVPLTVGSAAAYLQAGIFSARRYFVLLASSVLVITWLNLSNDVYDFDTGV 172
           AIKLPIYSVA VPLTVGSAAAYLQ GIFSA+ YFVLLASS+LVITWLNLSNDVYDFDTGV
Sbjct: 95  AIKLPIYSVALVPLTVGSAAAYLQTGIFSAKCYFVLLASSILVITWLNLSNDVYDFDTGV 154

Query: 173 DKNKKESVVNLVGSRTGTFIAAYSCLALGFVGLAWAAVVAGNMRSMLFLSCAIICGYIYQ 232
           DKNKKESVVNLVGSRTG FI AY CLALGFVGL WAAV AGN+RS+LFL+CAI CGYIYQ
Sbjct: 155 DKNKKESVVNLVGSRTGIFIVAYLCLALGFVGLTWAAVEAGNIRSVLFLTCAIFCGYIYQ 214