Miyakogusa Predicted Gene

Lj4g3v0341170.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0341170.1 Non Characterized Hit- tr|I1KR24|I1KR24_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24999 PE,85.37,0,FAMILY
NOT NAMED,NULL; seg,NULL; DUF1084,Domain of unknown function
DUF1084,CUFF.46971.1
         (294 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |...   484   e-137
Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |...   484   e-137
Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |...   311   7e-85
Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |...   308   5e-84
Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |...   302   2e-82
Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |...   231   5e-61
Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |...   229   2e-60
Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |...   193   1e-49

>Medtr4g094212.1 | tobamovirus multiplication-like protein | HC |
           chr4:37446139-37449467 | 20130731
          Length = 289

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/294 (79%), Positives = 254/294 (86%), Gaps = 5/294 (1%)

Query: 1   MGFSLRTKSFGFIEGEXXXXXXNSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLV 60
           M FSLRTK+F FIEGE       + WWN+ID+SDQWQR IYYTLCAAYA VSF+AL+QLV
Sbjct: 1   MAFSLRTKTFTFIEGEA-----PTQWWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLV 55

Query: 61  RIQMRVPEYGWTTQKVFHLMNFVVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFS 120
           RIQMRVPEYGWTTQKVFHLMNF+VNG+RAVLFGLY+SVFAIRPK  EQV+MEVPGLLFFS
Sbjct: 56  RIQMRVPEYGWTTQKVFHLMNFLVNGVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFS 115

Query: 121 TYTLLVLFWAEIYHQARSEPAHKLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKL 180
           TYTLLVLFWAEIYHQARSEPA KLRPAYF +NG VY +Q+C+WIYM+ SKT  GIEAAKL
Sbjct: 116 TYTLLVLFWAEIYHQARSEPAQKLRPAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKL 175

Query: 181 LLAVISFCAAXXXXXXXXXXXXXXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLA 240
            LAVISFCAA                 PIESRGRQKKLYEVGSVT+ICCTCFLIRCVLLA
Sbjct: 176 FLAVISFCAALGFLLYGGRLFFLLRRFPIESRGRQKKLYEVGSVTSICCTCFLIRCVLLA 235

Query: 241 ISAFEEDADLDVLDHPILNLVYYLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           ISAF+++ADLDVL HP+LNLVYYLLVEIVPSALVLFILRKLPP+RVSDQYHPIR
Sbjct: 236 ISAFDQEADLDVLSHPMLNLVYYLLVEIVPSALVLFILRKLPPKRVSDQYHPIR 289


>Medtr4g094212.2 | tobamovirus multiplication-like protein | HC |
           chr4:37446151-37449551 | 20130731
          Length = 289

 Score =  484 bits (1246), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 233/294 (79%), Positives = 254/294 (86%), Gaps = 5/294 (1%)

Query: 1   MGFSLRTKSFGFIEGEXXXXXXNSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLV 60
           M FSLRTK+F FIEGE       + WWN+ID+SDQWQR IYYTLCAAYA VSF+AL+QLV
Sbjct: 1   MAFSLRTKTFTFIEGEA-----PTQWWNDIDDSDQWQRGIYYTLCAAYATVSFIALIQLV 55

Query: 61  RIQMRVPEYGWTTQKVFHLMNFVVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFS 120
           RIQMRVPEYGWTTQKVFHLMNF+VNG+RAVLFGLY+SVFAIRPK  EQV+MEVPGLLFFS
Sbjct: 56  RIQMRVPEYGWTTQKVFHLMNFLVNGVRAVLFGLYKSVFAIRPKVFEQVLMEVPGLLFFS 115

Query: 121 TYTLLVLFWAEIYHQARSEPAHKLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKL 180
           TYTLLVLFWAEIYHQARSEPA KLRPAYF +NG VY +Q+C+WIYM+ SKT  GIEAAKL
Sbjct: 116 TYTLLVLFWAEIYHQARSEPAQKLRPAYFSINGVVYLIQICIWIYMTASKTVAGIEAAKL 175

Query: 181 LLAVISFCAAXXXXXXXXXXXXXXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLA 240
            LAVISFCAA                 PIESRGRQKKLYEVGSVT+ICCTCFLIRCVLLA
Sbjct: 176 FLAVISFCAALGFLLYGGRLFFLLRRFPIESRGRQKKLYEVGSVTSICCTCFLIRCVLLA 235

Query: 241 ISAFEEDADLDVLDHPILNLVYYLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           ISAF+++ADLDVL HP+LNLVYYLLVEIVPSALVLFILRKLPP+RVSDQYHPIR
Sbjct: 236 ISAFDQEADLDVLSHPMLNLVYYLLVEIVPSALVLFILRKLPPKRVSDQYHPIR 289


>Medtr2g022880.1 | tobamovirus multiplication-like protein | HC |
           chr2:7962710-7966725 | 20130731
          Length = 284

 Score =  311 bits (796), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 147/263 (55%), Positives = 191/263 (72%)

Query: 32  ESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNFVVNGLRAVL 91
             D     ++YTLCA+++ +SF+AL+QL+RI++RVPEYGWTTQK+FHL NF+V+G+RA++
Sbjct: 22  HRDSTHSPLFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGVRALV 81

Query: 92  FGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAHKLRPAYFIV 151
           FG +  VF + PK L  V++++PGL+FFSTYTLLVLFWAEIYHQARS P  KLR  Y  V
Sbjct: 82  FGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRIIYISV 141

Query: 152 NGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXXXXXXXPIES 211
           NG VY +QV  WIY+ +          K+ +A +SF AA                 PIES
Sbjct: 142 NGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRFPIES 201

Query: 212 RGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVYYLLVEIVPS 271
           +GR+KKL EVG VT IC TCFLIR V++ +SA + DA LDVLDHPIL+ +YY++VEI+PS
Sbjct: 202 KGRRKKLQEVGFVTIICFTCFLIRSVMVLVSAVDSDASLDVLDHPILDFIYYMVVEILPS 261

Query: 272 ALVLFILRKLPPRRVSDQYHPIR 294
           A+VLFILRKLPP+R+S QYH I 
Sbjct: 262 AIVLFILRKLPPKRISAQYHDIH 284


>Medtr4g131930.1 | tobamovirus multiplication-like protein | HC |
           chr4:55083666-55089675 | 20130731
          Length = 278

 Score =  308 bits (788), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 154/271 (56%), Positives = 197/271 (72%)

Query: 24  SNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNFV 83
           S+   +I  +  WQ SI+Y + +AYA VSFVAL QLVRIQ+RVPEYGWTTQK+FHLMNF+
Sbjct: 8   SSMEEDIAATTSWQSSIFYFISSAYAVVSFVALFQLVRIQLRVPEYGWTTQKIFHLMNFI 67

Query: 84  VNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAHK 143
           +NG+RA++FGL+  +F   PK    V++++PGLLFFSTYTLLVLFWAEIYHQARS P   
Sbjct: 68  LNGVRALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPTDM 127

Query: 144 LRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXXX 203
           L+  Y  +N  +Y +Q+C+WIY+     +      K+ +  +SF AA             
Sbjct: 128 LKIIYISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGRLFCM 187

Query: 204 XXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVYY 263
               PIES+GR+KKL+EVGS+T IC TCFLIRCV+  +SAF+ D  LDVLDHPIL+LVYY
Sbjct: 188 LRHFPIESKGRRKKLHEVGSITAICFTCFLIRCVMGFLSAFDSDTSLDVLDHPILDLVYY 247

Query: 264 LLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           +LVE++PSALVL+ILRKLPPRR+S QYH I 
Sbjct: 248 MLVEVLPSALVLYILRKLPPRRISAQYHAIH 278


>Medtr1g033830.1 | tobamovirus multiplication-like protein | HC |
           chr1:12230012-12237108 | 20130731
          Length = 297

 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 142/272 (52%), Positives = 196/272 (72%)

Query: 23  NSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNF 82
           +S WWN+ID+S  WQ  I+YTL   Y  VS +AL+QLVRIQ+RVPEYGWTTQKVFH +NF
Sbjct: 26  SSTWWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVFHFLNF 85

Query: 83  VVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAH 142
           VVN +R ++F  +++V  ++P+  + ++++VP L FF+TY LLVLFWAEIY+QAR+    
Sbjct: 86  VVNAVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSTD 145

Query: 143 KLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXX 202
            L+P+++I+N  VY VQ+ LW+ +     +  +  +K+  A +S  AA            
Sbjct: 146 GLKPSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYGGRLFL 205

Query: 203 XXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILNLVY 262
                P+ES+GR+KKL EVG VTTIC  CFLIR V++  +AF+++A+L+V+DHPILN +Y
Sbjct: 206 MLQRFPVESKGRRKKLQEVGYVTTICFLCFLIRSVMMCFNAFDKNANLNVMDHPILNFIY 265

Query: 263 YLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           YLLVEI+PS+LVLFILRKLPP+R   QYHPIR
Sbjct: 266 YLLVEILPSSLVLFILRKLPPKRGITQYHPIR 297


>Medtr4g131930.2 | tobamovirus multiplication-like protein | HC |
           chr4:55083666-55089675 | 20130731
          Length = 215

 Score =  231 bits (590), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 118/215 (54%), Positives = 153/215 (71%)

Query: 80  MNFVVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSE 139
           MNF++NG+RA++FGL+  +F   PK    V++++PGLLFFSTYTLLVLFWAEIYHQARS 
Sbjct: 1   MNFILNGVRALVFGLHTLLFLFHPKVFVLVLLDLPGLLFFSTYTLLVLFWAEIYHQARSL 60

Query: 140 PAHKLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXX 199
           P   L+  Y  +N  +Y +Q+C+WIY+     +      K+ +  +SF AA         
Sbjct: 61  PTDMLKIIYISINAALYIIQICIWIYLWTDDNSVVEFFGKIFIGGVSFVAALGFLLYGGR 120

Query: 200 XXXXXXXXPIESRGRQKKLYEVGSVTTICCTCFLIRCVLLAISAFEEDADLDVLDHPILN 259
                   PIES+GR+KKL+EVGS+T IC TCFLIRCV+  +SAF+ D  LDVLDHPIL+
Sbjct: 121 LFCMLRHFPIESKGRRKKLHEVGSITAICFTCFLIRCVMGFLSAFDSDTSLDVLDHPILD 180

Query: 260 LVYYLLVEIVPSALVLFILRKLPPRRVSDQYHPIR 294
           LVYY+LVE++PSALVL+ILRKLPPRR+S QYH I 
Sbjct: 181 LVYYMLVEVLPSALVLYILRKLPPRRISAQYHAIH 215


>Medtr2g022880.2 | tobamovirus multiplication-like protein | HC |
           chr2:7962718-7966725 | 20130731
          Length = 252

 Score =  229 bits (585), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 110/209 (52%), Positives = 144/209 (68%)

Query: 32  ESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNFVVNGLRAVL 91
             D     ++YTLCA+++ +SF+AL+QL+RI++RVPEYGWTTQK+FHL NF+V+G+RA++
Sbjct: 22  HRDSTHSPLFYTLCASFSLISFIALIQLIRIELRVPEYGWTTQKIFHLFNFIVSGVRALV 81

Query: 92  FGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAHKLRPAYFIV 151
           FG +  VF + PK L  V++++PGL+FFSTYTLLVLFWAEIYHQARS P  KLR  Y  V
Sbjct: 82  FGFHAQVFFLHPKVLTLVLLDLPGLVFFSTYTLLVLFWAEIYHQARSLPTDKLRIIYISV 141

Query: 152 NGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXXXXXXXPIES 211
           NG VY +QV  WIY+ +          K+ +A +SF AA                 PIES
Sbjct: 142 NGAVYLIQVGFWIYLWLDYNDVVDFIGKIFIAGVSFVAAIGFLIFGGRLFFMLKRFPIES 201

Query: 212 RGRQKKLYEVGSVTTICCTCFLIRCVLLA 240
           +GR+KKL EVG VT IC TCFLIR V++ 
Sbjct: 202 KGRRKKLQEVGFVTIICFTCFLIRSVMVT 230


>Medtr1g033830.2 | tobamovirus multiplication-like protein | HC |
           chr1:12230012-12236055 | 20130731
          Length = 224

 Score =  193 bits (491), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 91/198 (45%), Positives = 132/198 (66%)

Query: 23  NSNWWNEIDESDQWQRSIYYTLCAAYACVSFVALVQLVRIQMRVPEYGWTTQKVFHLMNF 82
           +S WWN+ID+S  WQ  I+YTL   Y  VS +AL+QLVRIQ+RVPEYGWTTQKVFH +NF
Sbjct: 26  SSTWWNDIDDSPLWQDRIFYTLAGLYGVVSAIALIQLVRIQLRVPEYGWTTQKVFHFLNF 85

Query: 83  VVNGLRAVLFGLYQSVFAIRPKALEQVVMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAH 142
           VVN +R ++F  +++V  ++P+  + ++++VP L FF+TY LLVLFWAEIY+QAR+    
Sbjct: 86  VVNAVRCLVFIFFRNVQRLQPEIAQHILLDVPSLAFFTTYALLVLFWAEIYYQARAVSTD 145

Query: 143 KLRPAYFIVNGFVYFVQVCLWIYMSVSKTATGIEAAKLLLAVISFCAAXXXXXXXXXXXX 202
            L+P+++I+N  VY VQ+ LW+ +     +  +  +K+  A +S  AA            
Sbjct: 146 GLKPSFYIINVVVYAVQIILWLILWWKPVSVLVILSKVFFAGVSLFAALGFLLYGGRLFL 205

Query: 203 XXXXXPIESRGRQKKLYE 220
                P+ES+GR+KKL E
Sbjct: 206 MLQRFPVESKGRRKKLQE 223