Miyakogusa Predicted Gene

Lj4g3v0341090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0341090.1 tr|A2IBG3|A2IBG3_VIGUN Alternative oxidase
OS=Vigna unguiculata GN=Aox2a PE=3 SV=1,79.94,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; coiled-coil,NULL; seg,NULL;
AOX,Alternative oxidase,CUFF.46966.1
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094222.1 | ubiquinol oxidase 1a | HC | chr4:37468261-3747...   535   e-152
Medtr5g070680.1 | ubiquinol oxidase 1a | HC | chr5:29933297-2993...   453   e-127
Medtr5g026620.1 | ubiquinol oxidase 1a | HC | chr5:10973893-1097...   433   e-122
Medtr5g070870.1 | ubiquinol oxidase 1a | HC | chr5:29936021-2993...   430   e-120
Medtr5g026620.2 | ubiquinol oxidase 1a | HC | chr5:10973817-1097...   393   e-109
Medtr2g025140.1 | ubiquinol oxidase | HC | chr2:8939905-8935418 ...    75   1e-13

>Medtr4g094222.1 | ubiquinol oxidase 1a | HC |
           chr4:37468261-37471472 | 20130731
          Length = 345

 Score =  535 bits (1377), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 266/345 (77%), Positives = 281/345 (81%), Gaps = 11/345 (3%)

Query: 1   MKHLALSYALRRAL----NCNRHGLTAVRQLPATEV--RRFLVSGENGVFSCWNRMMSSQ 54
           MKH AL Y  RRAL    N NR     VR   A E+  +     G NG    W RMMSSQ
Sbjct: 1   MKHSALCYVARRALIGGRNSNRQSSAVVRSFAAAEIGQKHLYADGGNGGLFYWKRMMSSQ 60

Query: 55  XXXXXXXXXXXXXXXSLRTEAKK-----NDGSVVVSSYWGISRPKITREDGTEWPWNCFM 109
                          + + E KK        +VV SSYWGISRPKI REDGTEWPWNCFM
Sbjct: 61  AAPSKPSAEETEAKSTEKNEKKKEESSGTKNNVVASSYWGISRPKIMREDGTEWPWNCFM 120

Query: 110 PWETYRPDLSIDLTKHHVPKNFLDKVAYRTVKLLRIPTDVFFQRRYGCRAMMLETVAAVP 169
           PWETY+ ++SIDL KHHVPKNFLDKVAYRTVKLLRIPTDVFF+RRYGCRAMMLETVAAVP
Sbjct: 121 PWETYQSNVSIDLNKHHVPKNFLDKVAYRTVKLLRIPTDVFFKRRYGCRAMMLETVAAVP 180

Query: 170 GMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVQPKWYERFLVLTVQGV 229
           GMVGGMLLHL+SLRKFQ SGGW+KALLEEAENERMHLMTMVELV+PKWYERFLVL VQGV
Sbjct: 181 GMVGGMLLHLKSLRKFQHSGGWVKALLEEAENERMHLMTMVELVKPKWYERFLVLAVQGV 240

Query: 230 FFNAFFVLYLLSPKVAHRVVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPK 289
           FFNAFFVLY+LSPKVAHRVVGYLEEEAIHSYTEYLKDI+SGAIENVPAPAIAIDYWRLPK
Sbjct: 241 FFNAFFVLYILSPKVAHRVVGYLEEEAIHSYTEYLKDIDSGAIENVPAPAIAIDYWRLPK 300

Query: 290 DATLKDVITVIRADEAHHRDVNHFASDIHFHGKELREAPAPLGYH 334
           DA LKDVITVIRADEAHHRDVNHFASDIHFHGKELR+APAPLGYH
Sbjct: 301 DAKLKDVITVIRADEAHHRDVNHFASDIHFHGKELRDAPAPLGYH 345


>Medtr5g070680.1 | ubiquinol oxidase 1a | HC |
           chr5:29933297-29930958 | 20130731
          Length = 323

 Score =  453 bits (1166), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 205/257 (79%), Positives = 231/257 (89%)

Query: 78  NDGSVVVSSYWGISRPKITREDGTEWPWNCFMPWETYRPDLSIDLTKHHVPKNFLDKVAY 137
           ND + VVSSYWGI+RPK+ REDGTEWPWNCFMPWE+Y  D+SID+TKHHVPK F DK A+
Sbjct: 67  NDSNTVVSSYWGITRPKVKREDGTEWPWNCFMPWESYSSDVSIDVTKHHVPKTFGDKFAF 126

Query: 138 RTVKLLRIPTDVFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLE 197
           R+VK LR+ +D++F+ RYGC AMMLET+AAVP MVGGMLLHL+SLRKFQ +GGWIKALLE
Sbjct: 127 RSVKFLRVLSDLYFKERYGCHAMMLETIAAVPPMVGGMLLHLKSLRKFQHTGGWIKALLE 186

Query: 198 EAENERMHLMTMVELVQPKWYERFLVLTVQGVFFNAFFVLYLLSPKVAHRVVGYLEEEAI 257
           EAENERMHLMTMVELV+P W+ER LV+T QGVFFNAFFV Y+LSPK AHR VGYLEEEA+
Sbjct: 187 EAENERMHLMTMVELVKPSWHERLLVITAQGVFFNAFFVFYILSPKTAHRFVGYLEEEAV 246

Query: 258 HSYTEYLKDIESGAIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASDI 317
            SYT++L  IESG +ENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASDI
Sbjct: 247 ISYTQHLNAIESGKVENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASDI 306

Query: 318 HFHGKELREAPAPLGYH 334
           H  GKEL+EAPAP+GYH
Sbjct: 307 HHQGKELKEAPAPIGYH 323


>Medtr5g026620.1 | ubiquinol oxidase 1a | HC |
           chr5:10973893-10970470 | 20130731
          Length = 330

 Score =  433 bits (1114), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 197/265 (74%), Positives = 231/265 (87%)

Query: 70  SLRTEAKKNDGSVVVSSYWGISRPKITREDGTEWPWNCFMPWETYRPDLSIDLTKHHVPK 129
           S +  A  N     ++SYWG+   KIT+ DGTEW WNCF PWETY+ D++IDLTKHH P 
Sbjct: 66  SSQGGAGDNKDEKGITSYWGVQPSKITKPDGTEWKWNCFRPWETYKADVTIDLTKHHKPT 125

Query: 130 NFLDKVAYRTVKLLRIPTDVFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSG 189
            FLDK+AY TVK LR PTD+FFQRRYGCRAMMLETVAAVPGMVGGMLLH +SLR+F+QSG
Sbjct: 126 TFLDKMAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAVPGMVGGMLLHCKSLRRFEQSG 185

Query: 190 GWIKALLEEAENERMHLMTMVELVQPKWYERFLVLTVQGVFFNAFFVLYLLSPKVAHRVV 249
           GWIKALLEEAENERMHLMT +E+ +PKWYER LV+TVQGVFFNA+F+ YLLSPK AHR+V
Sbjct: 186 GWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQGVFFNAYFLGYLLSPKFAHRMV 245

Query: 250 GYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRD 309
           GYLEEEAIHSYTE+LK+++ G IENVPAPAIAIDYW+LP+++TL+DV+ V+RADEAHHRD
Sbjct: 246 GYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLPQNSTLRDVVEVVRADEAHHRD 305

Query: 310 VNHFASDIHFHGKELREAPAPLGYH 334
           VNHFASDIH+ G+ELREA AP+GYH
Sbjct: 306 VNHFASDIHYQGRELREAAAPIGYH 330


>Medtr5g070870.1 | ubiquinol oxidase 1a | HC |
           chr5:29936021-29933520 | 20130731
          Length = 324

 Score =  430 bits (1105), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 206/265 (77%), Positives = 234/265 (88%), Gaps = 2/265 (0%)

Query: 72  RTEAKKNDGS--VVVSSYWGISRPKITREDGTEWPWNCFMPWETYRPDLSIDLTKHHVPK 129
           +TE  K D +   VVSSYWGISRPK+ +EDGTEWPWNCFMPWE+Y  D+SID+TKHHVPK
Sbjct: 60  QTEESKKDANHNAVVSSYWGISRPKVLKEDGTEWPWNCFMPWESYSSDVSIDVTKHHVPK 119

Query: 130 NFLDKVAYRTVKLLRIPTDVFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSG 189
            F DK A+R+VK LR+ +D++F+ RYGC AMMLET+AAVPGMVGGMLLHL+SLRKFQ +G
Sbjct: 120 TFGDKFAFRSVKFLRVLSDLYFKERYGCHAMMLETIAAVPGMVGGMLLHLKSLRKFQHAG 179

Query: 190 GWIKALLEEAENERMHLMTMVELVQPKWYERFLVLTVQGVFFNAFFVLYLLSPKVAHRVV 249
           GWIKALLEEAENERMHLMTMVELV+P W+ER LV+T QGVFFN FFV Y+LSPK+AHR V
Sbjct: 180 GWIKALLEEAENERMHLMTMVELVKPSWHERLLVITAQGVFFNGFFVFYILSPKIAHRFV 239

Query: 250 GYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRD 309
           GYLEEEA+ SYT+YL  IESG +ENVPAPAIAIDYWRLP DATLKDV+TVIRADEAHHRD
Sbjct: 240 GYLEEEAVISYTQYLNAIESGKVENVPAPAIAIDYWRLPNDATLKDVVTVIRADEAHHRD 299

Query: 310 VNHFASDIHFHGKELREAPAPLGYH 334
           VNHFASDIH  GKEL+EAPAP+GYH
Sbjct: 300 VNHFASDIHHQGKELKEAPAPVGYH 324


>Medtr5g026620.2 | ubiquinol oxidase 1a | HC |
           chr5:10973817-10971044 | 20130731
          Length = 262

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 179/226 (79%), Positives = 208/226 (92%)

Query: 109 MPWETYRPDLSIDLTKHHVPKNFLDKVAYRTVKLLRIPTDVFFQRRYGCRAMMLETVAAV 168
           MPWETY+ D++IDLTKHH P  FLDK+AY TVK LR PTD+FFQRRYGCRAMMLETVAAV
Sbjct: 37  MPWETYKADVTIDLTKHHKPTTFLDKMAYWTVKSLRWPTDIFFQRRYGCRAMMLETVAAV 96

Query: 169 PGMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLMTMVELVQPKWYERFLVLTVQG 228
           PGMVGGMLLH +SLR+F+QSGGWIKALLEEAENERMHLMT +E+ +PKWYER LV+TVQG
Sbjct: 97  PGMVGGMLLHCKSLRRFEQSGGWIKALLEEAENERMHLMTFMEVAKPKWYERALVITVQG 156

Query: 229 VFFNAFFVLYLLSPKVAHRVVGYLEEEAIHSYTEYLKDIESGAIENVPAPAIAIDYWRLP 288
           VFFNA+F+ YLLSPK AHR+VGYLEEEAIHSYTE+LK+++ G IENVPAPAIAIDYW+LP
Sbjct: 157 VFFNAYFLGYLLSPKFAHRMVGYLEEEAIHSYTEFLKELDKGNIENVPAPAIAIDYWQLP 216

Query: 289 KDATLKDVITVIRADEAHHRDVNHFASDIHFHGKELREAPAPLGYH 334
           +++TL+DV+ V+RADEAHHRDVNHFASDIH+ G+ELREA AP+GYH
Sbjct: 217 QNSTLRDVVEVVRADEAHHRDVNHFASDIHYQGRELREAAAPIGYH 262


>Medtr2g025140.1 | ubiquinol oxidase | HC | chr2:8939905-8935418 |
           20130731
          Length = 342

 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 21/180 (11%)

Query: 148 DVFFQRRYGCRAMMLETVAAVPGMVGGMLLHLRSLRKFQQSGGWIKALLEEAENERMHLM 207
           D  ++ R   R  +LET+A VP      +LH+     + +   ++K    E+ NE  HL+
Sbjct: 109 DALYRDRNYARFFVLETIARVPYFAFMSILHMYESFGWWRRADYLKVHFAESWNEMHHLL 168

Query: 208 TMVELVQPK-WYERFLVLTVQGVFFNAFFVLYLLSPKVAHRVVGYLEEEAIHSYTEYLKD 266
            M EL     W++RFL   +   ++    ++YL+SP++A+     +E  A  +Y +++K+
Sbjct: 169 IMEELGGNAWWFDRFLAQHIAIFYYFMTALMYLISPRMAYHFSECVESHAFETYDKFIKE 228

Query: 267 IESGAIENVPAPAIAIDYW-------------------RLPKDATLKDVITVIRADEAHH 307
            +   ++ +PAP +A++Y+                   R P    L DV   IR DEA H
Sbjct: 229 -QGEELKKMPAPEVAVNYYTGGDLYLFDEFQTSRVPNTRRPTIDNLYDVFLNIRDDEAEH 287