Miyakogusa Predicted Gene

Lj4g3v0340710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0340710.1 Non Characterized Hit- tr|J3LSA8|J3LSA8_ORYBR
Uncharacterized protein (Fragment) OS=Oryza
brachyanth,50.75,0.000000000008,seg,NULL; Hyccin,Hyccin,CUFF.46958.1
         (410 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094262.1 | hyccin protein | HC | chr4:37571961-37569966 |...   388   e-108
Medtr5g087660.1 | hyccin protein | HC | chr5:38006198-38005140 |...   177   2e-44
Medtr3g465420.1 | hyccin protein | HC | chr3:26461615-26462667 |...   171   1e-42

>Medtr4g094262.1 | hyccin protein | HC | chr4:37571961-37569966 |
           20130731
          Length = 426

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/391 (55%), Positives = 235/391 (60%), Gaps = 18/391 (4%)

Query: 28  KTDDPMHSWWESVSKARSRIHSLATILPNXXXXXXXXXXXXERPXXXXXXXXXXXXXXXX 87
            T+DPMHSWWESVSKARSRIHSL++ILP             ERP                
Sbjct: 46  NTNDPMHSWWESVSKARSRIHSLSSILPTHTSTLSPLADS-ERPALSLLSSPTAYSALSS 104

Query: 88  XXXXXXXDPLCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 147
                  DPLCHWLYDTFLSSDP                                    +
Sbjct: 105 SLSGSHSDPLCHWLYDTFLSSDPHLRLVVLSFIPLLSGLYLSRLHSSDPPSL-------A 157

Query: 148 GFEAVLLALYAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVISPPL 207
           GFEAVLLALYA+ETKSR GKPL+ T+PDLS+PSIYHSPLRK  + N N   SV VISPPL
Sbjct: 158 GFEAVLLALYASETKSRAGKPLLVTIPDLSIPSIYHSPLRKSSSQNPNP--SVGVISPPL 215

Query: 208 EPLLAVKSTKRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAGQDCPCRRDLDRVPX 267
           EP LAVKSTKRASIVG AL SYFSQISHMPSWSKLEF RF AGWAGQDCPCRR+ D++  
Sbjct: 216 EPHLAVKSTKRASIVGVALHSYFSQISHMPSWSKLEFSRFAAGWAGQDCPCRREFDQIEN 275

Query: 268 XXXXXXXXXXXXXXXXXXXCDREIEIESVGEMMGKVQIHDS-------DGLAKGDRIPLP 320
                               + E+EIE V E M  ++IH          G+AKGDRIPLP
Sbjct: 276 LNNTLALSNGNGNGYSNGDGESEVEIEEVAENMRNLEIHHDPECEESPKGIAKGDRIPLP 335

Query: 321 WEILQPALRILGHCLFAPLNPQEVKDAASFAVRCLYARASHDLVPQAILATRSLIQLXXX 380
           WEILQP LRILGHCL  PL  QEVKDAASFAVRCLYARASHDLVPQAILATRSLIQL   
Sbjct: 336 WEILQPTLRILGHCLMGPLISQEVKDAASFAVRCLYARASHDLVPQAILATRSLIQLDNR 395

Query: 381 XXXXXXXXXXXXXXXXX-XXXKKPEILLVSK 410
                                KKPEILLVSK
Sbjct: 396 TRDAITSASAVASNVNTPTKAKKPEILLVSK 426


>Medtr5g087660.1 | hyccin protein | HC | chr5:38006198-38005140 |
           20130731
          Length = 352

 Score =  177 bits (448), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/282 (37%), Positives = 144/282 (51%), Gaps = 30/282 (10%)

Query: 97  LCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLAL 156
           LC WLYDTF S+                                      +GFEAVLLAL
Sbjct: 78  LCRWLYDTFQSN---------VGDLQLTVLRFLPIIAGVYLSRVADRKPQAGFEAVLLAL 128

Query: 157 YAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVISPPLEPLLAVKST 216
           YA ET SR G+ +  T+PD+S PS+YH   +   N N     ++ V+SP LEP   V+ST
Sbjct: 129 YAHETNSRAGEAVTVTIPDMSHPSVYHE-FKAVVNKNGATDLNIVVLSPSLEPHGTVRST 187

Query: 217 KRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAGQDCPCRRDLDRVPXXXXXXXXXX 276
           +RA IVG A + ++++IS MP   K++FC+F   WAG+D    ++ +             
Sbjct: 188 RRARIVGIAFELFYNKISQMPVAPKIDFCKFCKIWAGEDGDMYKNFEDEDEDEEEEEEEE 247

Query: 277 XXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPWEILQPALRILGHCLF 336
                        E+EI+ VGE          +   K  R+P+PWE+LQP LRILGHCL 
Sbjct: 248 N-----------NEVEIQKVGE--------GGEEFVKSGRVPMPWELLQPVLRILGHCLL 288

Query: 337 APLNPQEVK-DAASFAVRCLYARASHDLVPQAILATRSLIQL 377
            P N   +  + AS A RCL+ARA HD+ P+AIL  RSL++L
Sbjct: 289 GPNNRDTMLFENASEACRCLFARAMHDVNPKAILPMRSLLRL 330


>Medtr3g465420.1 | hyccin protein | HC | chr3:26461615-26462667 |
           20130731
          Length = 350

 Score =  171 bits (434), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/282 (37%), Positives = 142/282 (50%), Gaps = 32/282 (11%)

Query: 97  LCHWLYDTFLSSDPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGFEAVLLAL 156
           LC WLYDTF S+                                      +GFEAVLLAL
Sbjct: 78  LCRWLYDTFQSN---------ITDLQLTVLRFLPIIAGVYLSRVADRKPQAGFEAVLLAL 128

Query: 157 YAAETKSRNGKPLIATVPDLSLPSIYHSPLRKPQNSNANAPSSVAVISPPLEPLLAVKST 216
           YA ET SR G+ +  T+PD++ PS+YH   +   N N+    ++ V+SP LEP   V+ST
Sbjct: 129 YAHETTSRAGEAVTITIPDMTHPSVYHES-KVVNNKNSATDLNIVVLSPSLEPHGTVRST 187

Query: 217 KRASIVGAALQSYFSQISHMPSWSKLEFCRFLAGWAGQDCPCRRDLDRVPXXXXXXXXXX 276
           +RA IVG A + ++S+IS MP   K++FC F   WAG+D    ++ +             
Sbjct: 188 RRARIVGIAFELFYSKISEMPVSPKIDFCNFCKIWAGEDGDMYKNFEDEDEDDEEEDEEE 247

Query: 277 XXXXXXXXXXCDREIEIESVGEMMGKVQIHDSDGLAKGDRIPLPWEILQPALRILGHCLF 336
                        E+EI+  GE              K  R+P+PWE+LQP LRILGHCL 
Sbjct: 248 EN----------NEVEIDKEGE-----------EFVKTGRVPMPWELLQPVLRILGHCLL 286

Query: 337 APLNPQEVK-DAASFAVRCLYARASHDLVPQAILATRSLIQL 377
            P N   +  + AS A RCL+ARA HD+ P+AIL  RSL++L
Sbjct: 287 GPNNKDTMLFEKASEACRCLFARAMHDVNPKAILPMRSLLRL 328