Miyakogusa Predicted Gene

Lj4g3v0338250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0338250.1 tr|Q10QL0|Q10QL0_ORYSJ Os03g0192600 protein
OS=Oryza sativa subsp. japonica GN=Os03g0192600 PE=2
SV=,43.18,0.00000000000007,Bifunctional inhibitor/lipid-transfer
protein/seed storage 2S albumin,Bifunctional inhibitor/plant
l,NODE_39362_length_475_cov_179.012634.path1.1
         (134 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g070360.1 | Lipid transfer protein | HC | chr5:29804370-29...   136   6e-33
Medtr2g008560.1 | Lipid transfer protein | HC | chr2:1536456-153...   116   7e-27
Medtr2g008580.1 | Lipid transfer protein | HC | chr2:1540285-153...   100   5e-22
Medtr3g079210.1 | Lipid transfer protein | HC | chr3:35630248-35...    63   7e-11
Medtr5g006950.1 | Lipid transfer protein | HC | chr5:1146399-114...    54   4e-08
Medtr1g103490.1 | Lipid transfer protein | HC | chr1:46837798-46...    53   6e-08
Medtr8g446830.1 | Lipid transfer protein | HC | chr8:18323481-18...    47   3e-06
Medtr1g103420.1 | Lipid transfer protein | HC | chr1:46817645-46...    47   4e-06
Medtr5g006940.1 | Lipid transfer protein | HC | chr5:1143135-114...    47   6e-06

>Medtr5g070360.1 | Lipid transfer protein | HC |
           chr5:29804370-29802224 | 20130731
          Length = 190

 Score =  136 bits (342), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/148 (61%), Positives = 100/148 (67%), Gaps = 17/148 (11%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQFGVVLNVTKALALPS 60
           M DCLSFVTN ST TKP+G CCSGLKSVLKTAPSCLCEAFKSS+QFGVVLNVTKA +LP+
Sbjct: 42  MADCLSFVTNGSTTTKPEGTCCSGLKSVLKTAPSCLCEAFKSSAQFGVVLNVTKATSLPA 101

Query: 61  ACKVSASNSVTNCGLSET---PAAAP--GLSPESS--------PQPGLNG--NGLSPSQV 105
           ACKVSA  S T CGLSE    PA+AP  GLSP+SS           GLNG  + LSP   
Sbjct: 102 ACKVSAP-SATKCGLSEVTEAPASAPAGGLSPQSSTASPTSSGAASGLNGPVSELSPVPA 160

Query: 106 VXXXXXXXXXXXXS-GSVLVCLLVAVFT 132
                        S GS+LVCLLVA  +
Sbjct: 161 PSPGNTASGLFPISMGSLLVCLLVATMS 188


>Medtr2g008560.1 | Lipid transfer protein | HC |
           chr2:1536456-1535394 | 20130731
          Length = 172

 Score =  116 bits (290), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 68/136 (50%), Positives = 90/136 (66%), Gaps = 4/136 (2%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQFGVVLNVTKALALPS 60
           MTDC SF+TN ST+T+P+G CC+GLK+++ TAPSCLC AFK ++  GVVLNV+KAL LP 
Sbjct: 39  MTDCFSFLTNGSTLTQPEGSCCNGLKTIVNTAPSCLCGAFKGNAHLGVVLNVSKALTLPF 98

Query: 61  ACKVSASNSVTNCGLSETPAAAPG--LSPESSPQPGLNGNGLSPSQVVXXXXXXXXXXXX 118
           ACKVSA  S++NCGL    AAAPG  +SP  +  P  +    + +               
Sbjct: 99  ACKVSAP-SISNCGLPNASAAAPGVSISPWPASSPTTSAEAPAAAPPSGKSAASTLLPIS 157

Query: 119 SGSVLVCLLVAVFTGL 134
            GS+LVCLL ++F+GL
Sbjct: 158 VGSLLVCLL-SLFSGL 172


>Medtr2g008580.1 | Lipid transfer protein | HC |
           chr2:1540285-1539002 | 20130731
          Length = 207

 Score =  100 bits (248), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 49/74 (66%), Positives = 62/74 (83%), Gaps = 1/74 (1%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQFGVVLNVTKALALPS 60
           M DCLSFV+NDST+TKP G CCSGLK+VLKT+P+CLC++ K+S+  GVVLNVTKA  LP+
Sbjct: 42  MADCLSFVSNDSTITKPSGACCSGLKTVLKTSPTCLCDSLKNSANLGVVLNVTKAATLPA 101

Query: 61  ACKVSASNSVTNCG 74
           AC +SA   ++NCG
Sbjct: 102 ACGLSAP-PLSNCG 114


>Medtr3g079210.1 | Lipid transfer protein | HC |
           chr3:35630248-35627567 | 20130731
          Length = 206

 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 12/108 (11%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSS--QFGVVLNVTKALAL 58
           M+DCL+FV + S +TKP   CC  L  ++   P CLC+   S++   FG+ +NV KAL L
Sbjct: 57  MSDCLTFVEDGSKLTKPDKGCCPELAGLIDGNPICLCKLLGSNTADSFGIKINVNKALKL 116

Query: 59  PSACKVSASNSVTNCGLSETPAAAPGLSPESSPQPGLNGNGLSPSQVV 106
           P+ C V+ +  V+ C     P + P         P L+G+ +SP+  +
Sbjct: 117 PTICGVT-TPPVSACSAIGVPVSLP---------PSLSGDAMSPNMAM 154


>Medtr5g006950.1 | Lipid transfer protein | HC |
           chr5:1146399-1147714 | 20130731
          Length = 168

 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 8/97 (8%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKS-SSQFGVVLNVTKALALP 59
           ++ CL+++T +S+   P   CCS L SV+ + P CLC+     +S  G+ +N T+ALALP
Sbjct: 35  LSPCLNYITGNSST--PSSGCCSNLASVVSSQPLCLCQVLGGGASSLGISINQTQALALP 92

Query: 60  SACKV-----SASNSVTNCGLSETPAAAPGLSPESSP 91
            ACKV     S   +      +++PA     SP S P
Sbjct: 93  GACKVQTPPTSQCKTTNAASPADSPAGTEAESPNSVP 129


>Medtr1g103490.1 | Lipid transfer protein | HC |
           chr1:46837798-46839766 | 20130731
          Length = 156

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFK-SSSQFGVVLNVTKALALP 59
           ++ CL ++T  S+   P   CC+ L SV+K+ P CLC+      S  G+ +N T+ALALP
Sbjct: 35  LSPCLDYITGKSST--PTSGCCTQLASVVKSQPQCLCQVLDGGGSSLGIKVNQTQALALP 92

Query: 60  SACKVSASNSVTNCGLSETPAAA 82
           SAC V  +   + C  + +PA A
Sbjct: 93  SACNVQ-TPPTSQCKTANSPAGA 114


>Medtr8g446830.1 | Lipid transfer protein | HC |
           chr8:18323481-18325978 | 20130731
          Length = 195

 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 5/70 (7%)

Query: 1   MTDCLSFVTNDSTVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQ---FGVVLNVTKALA 57
           +  CL +V  +     P   CC GLK++LKT   CLC   K  +     G+V+NVT AL 
Sbjct: 41  LASCLPYVEGEGKTPAPD--CCDGLKTLLKTNKKCLCVIIKDRNDPDLGGIVINVTLALN 98

Query: 58  LPSACKVSAS 67
           LP+ C   A+
Sbjct: 99  LPTVCNAPAN 108


>Medtr1g103420.1 | Lipid transfer protein | HC |
           chr1:46817645-46816110 | 20130731
          Length = 217

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 1   MTDCLSFVTNDSTV-TKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQFGVVLNVTKALALP 59
            T C+ F+T  S   T P  +CC  LKS+  +  +CLC    +S  F + +N T A++LP
Sbjct: 41  FTPCMGFLTGSSANGTSPTTECCGALKSLTSSGMNCLCLLVTASVPFKIPINRTLAISLP 100

Query: 60  SACKVSASNSVTNCGLSETPAAAPG 84
            AC +        C  S +P  APG
Sbjct: 101 RACNMPGVP--VQCKASASPLPAPG 123


>Medtr5g006940.1 | Lipid transfer protein | HC |
           chr5:1143135-1141543 | 20130731
          Length = 212

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 1   MTDCLSFVTNDS-TVTKPQGQCCSGLKSVLKTAPSCLCEAFKSSSQFGVVLNVTKALALP 59
           ++ CLSF+TN S   T P   CC+ +K++   +  C+C     +  F + +N T A++LP
Sbjct: 41  ISPCLSFLTNSSGNGTSPTADCCNAIKTLTSGSKDCMCLIATGNVPFALPINRTLAISLP 100

Query: 60  SACKVSASNSVTNCGLSETPAAAPG-------LSPESSPQPGLNGNGLSPSQV 105
            AC +        C  S +P  APG       LSP S+P      + + PS V
Sbjct: 101 RACNLPGVP--LQCKTSGSPLPAPGPASFGPSLSPASTPSLSPQASSILPSPV 151