Miyakogusa Predicted Gene
- Lj4g3v0336810.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0336810.1 Non Characterized Hit- tr|A5B610|A5B610_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,69.81,0.000000000007,Mito_carr,Mitochondrial substrate/solute
carrier; no description,Mitochondrial carrier domain;
SUBFA,CUFF.46911.1
(380 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g094305.1 | substrate carrier family protein | HC | chr4:3... 630 0.0
Medtr4g094305.2 | substrate carrier family protein | HC | chr4:3... 630 0.0
Medtr4g012850.1 | carnitine/acylcarnitine carrier CACL-like prot... 60 4e-09
Medtr4g088545.3 | substrate carrier family protein | HC | chr4:3... 55 9e-08
Medtr4g088545.1 | substrate carrier family protein | HC | chr4:3... 55 9e-08
Medtr4g088545.2 | substrate carrier family protein | HC | chr4:3... 54 2e-07
Medtr5g073040.1 | substrate carrier family protein | HC | chr5:3... 54 2e-07
Medtr7g084400.2 | substrate carrier family protein | HC | chr7:3... 49 6e-06
Medtr7g084400.1 | substrate carrier family protein | HC | chr7:3... 49 6e-06
>Medtr4g094305.1 | substrate carrier family protein | HC |
chr4:37682403-37676691 | 20130731
Length = 381
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/379 (78%), Positives = 329/379 (86%)
Query: 2 DDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVS 61
+LSKNQIFA+HGI AGS+ALAT FTYPLDTIKVLTQVGSSAGKELNA +++ RV +VS
Sbjct: 3 KELSKNQIFALHGITAAGSIALATTFTYPLDTIKVLTQVGSSAGKELNANQIVTRVFAVS 62
Query: 62 GNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIET 121
GNAG+FSG+GWLAFGR FGLGARFGVYEIL AF KDGRE+NYV SEA L GMAAGA ET
Sbjct: 63 GNAGMFSGFGWLAFGRIFGLGARFGVYEILTAFCKDGRENNYVTASEAFLVGMAAGATET 122
Query: 122 FISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIST 181
FISSPFELIKLRMQ +SAS++P+SNF+LEEG RKPL+ARLLNGC+P+K+SLNQYV L+ST
Sbjct: 123 FISSPFELIKLRMQAASASFVPNSNFSLEEGARKPLIARLLNGCYPDKKSLNQYVGLLST 182
Query: 182 LKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSVF 241
L KN N+ GALLEYPW MTGSG PPSVCNVRRPS+IISLEGWSTLWRG RSG+VRDSVF
Sbjct: 183 LTTKNTNISGALLEYPWAMTGSGLPPSVCNVRRPSNIISLEGWSTLWRGLRSGIVRDSVF 242
Query: 242 GGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGFD 301
GG+FFSSWQ LHQAMLDWKAVGMNPPPRLN+EVGPLSP HGFD
Sbjct: 243 GGVFFSSWQFLHQAMLDWKAVGMNPPPRLNDEVGPLSPLAVSLAAGFSGSVAAAASHGFD 302
Query: 302 TARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLAS 361
TAR+R+QCTV+PKYVSMERK L+WKR GNKFER TGIHPSDRNVL RG+GLRMARSG+AS
Sbjct: 303 TARSRSQCTVVPKYVSMERKLLQWKRPGNKFERFTGIHPSDRNVLSRGLGLRMARSGIAS 362
Query: 362 FMVVGSYFFVVDHLASSLT 380
FM+VGSY FVVDHL SSLT
Sbjct: 363 FMIVGSYLFVVDHLTSSLT 381
>Medtr4g094305.2 | substrate carrier family protein | HC |
chr4:37682403-37676691 | 20130731
Length = 381
Score = 630 bits (1626), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/379 (78%), Positives = 329/379 (86%)
Query: 2 DDLSKNQIFAVHGIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVS 61
+LSKNQIFA+HGI AGS+ALAT FTYPLDTIKVLTQVGSSAGKELNA +++ RV +VS
Sbjct: 3 KELSKNQIFALHGITAAGSIALATTFTYPLDTIKVLTQVGSSAGKELNANQIVTRVFAVS 62
Query: 62 GNAGLFSGYGWLAFGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIET 121
GNAG+FSG+GWLAFGR FGLGARFGVYEIL AF KDGRE+NYV SEA L GMAAGA ET
Sbjct: 63 GNAGMFSGFGWLAFGRIFGLGARFGVYEILTAFCKDGRENNYVTASEAFLVGMAAGATET 122
Query: 122 FISSPFELIKLRMQVSSASYIPSSNFALEEGGRKPLVARLLNGCHPEKRSLNQYVDLIST 181
FISSPFELIKLRMQ +SAS++P+SNF+LEEG RKPL+ARLLNGC+P+K+SLNQYV L+ST
Sbjct: 123 FISSPFELIKLRMQAASASFVPNSNFSLEEGARKPLIARLLNGCYPDKKSLNQYVGLLST 182
Query: 182 LKPKNANLEGALLEYPWTMTGSGKPPSVCNVRRPSDIISLEGWSTLWRGFRSGLVRDSVF 241
L KN N+ GALLEYPW MTGSG PPSVCNVRRPS+IISLEGWSTLWRG RSG+VRDSVF
Sbjct: 183 LTTKNTNISGALLEYPWAMTGSGLPPSVCNVRRPSNIISLEGWSTLWRGLRSGIVRDSVF 242
Query: 242 GGIFFSSWQLLHQAMLDWKAVGMNPPPRLNEEVGPLSPXXXXXXXXXXXXXXXXXXHGFD 301
GG+FFSSWQ LHQAMLDWKAVGMNPPPRLN+EVGPLSP HGFD
Sbjct: 243 GGVFFSSWQFLHQAMLDWKAVGMNPPPRLNDEVGPLSPLAVSLAAGFSGSVAAAASHGFD 302
Query: 302 TARTRTQCTVLPKYVSMERKFLKWKRLGNKFERITGIHPSDRNVLFRGVGLRMARSGLAS 361
TAR+R+QCTV+PKYVSMERK L+WKR GNKFER TGIHPSDRNVL RG+GLRMARSG+AS
Sbjct: 303 TARSRSQCTVVPKYVSMERKLLQWKRPGNKFERFTGIHPSDRNVLSRGLGLRMARSGIAS 362
Query: 362 FMVVGSYFFVVDHLASSLT 380
FM+VGSY FVVDHL SSLT
Sbjct: 363 FMIVGSYLFVVDHLTSSLT 381
>Medtr4g012850.1 | carnitine/acylcarnitine carrier CACL-like protein
| HC | chr4:3444460-3447359 | 20130731
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 114/280 (40%), Gaps = 52/280 (18%)
Query: 29 YPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRTFGLGARFGVY 88
YPLDT+++ Q G G N +L ++LS G L+ G G TF F Y
Sbjct: 31 YPLDTLRIRQQSGGQNGSAFN---ILRQMLSKEGFCSLYRGMGAPLASVTFQNAVVFQTY 87
Query: 89 EILA-AFSKDGR-EDNYVYPSEALLAGMAAGAIETFISSPFELIKLRMQVSSASYIPSS- 145
+L+ AF +D Y S AL GM G +++ + SP ELIK+R+Q+ + + S
Sbjct: 88 AVLSRAFDPSASAKDPPSYKSVAL-GGMGTGGLQSLLLSPVELIKIRLQLQNTNQSKESG 146
Query: 146 --------NFALEEGGR------------------------KPLVARLLNGCHPE-KRSL 172
N +EG R + + +L GC + SL
Sbjct: 147 TTPVKVAKNIWRKEGLRGIYRGLGITIMRDIPSHGFYFWTYEYMREKLHPGCRKSGQESL 206
Query: 173 NQYVDLISTLKPKNANLEGALLEYPWTMTGS---GKPPSVCNVRRPSDIISL----EGWS 225
N + + A + + YP+ + + + PS + D I+ EG+
Sbjct: 207 NTML-----VSGGLAGVASWVCSYPFDVVKTRLQAQTPSAIKYKGVYDCITKSVREEGYP 261
Query: 226 TLWRGFRSGLVRDSVFGGIFFSSWQLLHQAMLDWKAVGMN 265
LWRG + + R V G F++++ + + + + V M
Sbjct: 262 VLWRGLGTAVARAFVVNGAVFAAYEFALRFLFNNENVQMQ 301
>Medtr4g088545.3 | substrate carrier family protein | HC |
chr4:35167060-35169946 | 20130731
Length = 270
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 18 AGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYGWLA 74
AG A+ATG +P DT+KV Q ++ + N R+L G GL+ G
Sbjct: 18 AGVAAVATG--HPFDTVKVKLQTHNTEAHLVQYRNGLHCTARILKTEGIKGLYRGATSSF 75
Query: 75 FGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRM 134
G FG+Y + + G + P + + AGAI +F+ P ELIK RM
Sbjct: 76 AGMALEGSLFFGIYSQTKKYLQGGMQSGAPRPQVIIPSAAFAGAINSFVLGPTELIKCRM 135
Query: 135 QVS-SASYIPSSN 146
Q+ + S +P S+
Sbjct: 136 QIQGTDSLVPMSS 148
>Medtr4g088545.1 | substrate carrier family protein | HC |
chr4:35167060-35169946 | 20130731
Length = 305
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 18 AGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYGWLA 74
AG A+ATG +P DT+KV Q ++ + N R+L G GL+ G
Sbjct: 18 AGVAAVATG--HPFDTVKVKLQTHNTEAHLVQYRNGLHCTARILKTEGIKGLYRGATSSF 75
Query: 75 FGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRM 134
G FG+Y + + G + P + + AGAI +F+ P ELIK RM
Sbjct: 76 AGMALEGSLFFGIYSQTKKYLQGGMQSGAPRPQVIIPSAAFAGAINSFVLGPTELIKCRM 135
Query: 135 QVS-SASYIPSSN 146
Q+ + S +P S+
Sbjct: 136 QIQGTDSLVPMSS 148
>Medtr4g088545.2 | substrate carrier family protein | HC |
chr4:35167060-35169946 | 20130731
Length = 240
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 18 AGSVALATGFTYPLDTIKVLTQVGSSAGKEL---NAAEVLMRVLSVSGNAGLFSGYGWLA 74
AG A+ATG +P DT+KV Q ++ + N R+L G GL+ G
Sbjct: 18 AGVAAVATG--HPFDTVKVKLQTHNTEAHLVQYRNGLHCTARILKTEGIKGLYRGATSSF 75
Query: 75 FGRTFGLGARFGVYEILAAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRM 134
G FG+Y + + G + P + + AGAI +F+ P ELIK RM
Sbjct: 76 AGMALEGSLFFGIYSQTKKYLQGGMQSGAPRPQVIIPSAAFAGAINSFVLGPTELIKCRM 135
Query: 135 QVS-SASYIPSSN 146
Q+ + S +P S+
Sbjct: 136 QIQGTDSLVPMSS 148
>Medtr5g073040.1 | substrate carrier family protein | HC |
chr5:31088929-31082962 | 20130731
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 29 YPLDTIKVLTQ-VGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWLAFGRTFGLGARFGV 87
+P+DT+K Q + S K ++ + L +L G + L+ G G + G F V
Sbjct: 54 FPVDTVKTHMQAITSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSV 113
Query: 88 YEIL-AAFSKDGREDNYVYPSEALLAGMAAGAIETFISSPFELIKLRMQVSSASY 141
YE L FS D++V+ + A +A+ A+ T P +++K R+Q+S++ Y
Sbjct: 114 YETLKKKFSHGNVNDHFVHAGSGVCATVASDAVFT----PMDMVKQRLQLSNSGY 164
>Medtr7g084400.2 | substrate carrier family protein | HC |
chr7:32584132-32580284 | 20130731
Length = 421
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 14 GIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWL 73
G+AGA S T PLD +KV+ QV +++ + + A + L + G G F G G
Sbjct: 211 GVAGAASRTA----TAPLDRLKVVLQVQTTSARIMPAVKTLWKE---GGLVGFFRGNGLN 263
Query: 74 AFGRTFGLGARFGVYEILAAF---SKDGREDNYVYPSEALLAGMAAGAIETFISSPFELI 130
RF YE++ F +K G E + LLAG AGA+ + P +L+
Sbjct: 264 VLKVAPESAIRFYTYEMMKTFIVDAKGGEEKADIGGMGRLLAGGIAGAVAQTLIYPMDLV 323
Query: 131 KLRMQ--VSSASYIPS 144
K R+Q ++ IPS
Sbjct: 324 KTRLQTYTHASGKIPS 339
>Medtr7g084400.1 | substrate carrier family protein | HC |
chr7:32583741-32580662 | 20130731
Length = 488
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 14 GIAGAGSVALATGFTYPLDTIKVLTQVGSSAGKELNAAEVLMRVLSVSGNAGLFSGYGWL 73
G+AGA S T PLD +KV+ QV +++ + + A + L + G G F G G
Sbjct: 217 GVAGAASRTA----TAPLDRLKVVLQVQTTSARIMPAVKTLWKE---GGLVGFFRGNGLN 269
Query: 74 AFGRTFGLGARFGVYEILAAF---SKDGREDNYVYPSEALLAGMAAGAIETFISSPFELI 130
RF YE++ F +K G E + LLAG AGA+ + P +L+
Sbjct: 270 VLKVAPESAIRFYTYEMMKTFIVDAKGGEEKADIGGMGRLLAGGIAGAVAQTLIYPMDLV 329
Query: 131 KLRMQ--VSSASYIPS 144
K R+Q ++ IPS
Sbjct: 330 KTRLQTYTHASGKIPS 345