Miyakogusa Predicted Gene

Lj4g3v0286120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0286120.1 CUFF.46929.1
         (941 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094545.1 | small RNA methyltransferase | HC | chr4:382078...  1436   0.0  
Medtr4g094545.2 | small RNA methyltransferase | HC | chr4:382046...  1108   0.0  

>Medtr4g094545.1 | small RNA methyltransferase | HC |
           chr4:38207856-38198992 | 20130731
          Length = 946

 Score = 1436 bits (3718), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 707/952 (74%), Positives = 798/952 (83%), Gaps = 23/952 (2%)

Query: 1   MEKKEQPAVAKRKLTVTPKAVIHQKFGKKACYVVEEVKEVCQAECPGLNIPQMGPCLYRC 60
           M  KE+P  A +K  +TPKA+IHQKFGK ACYVVEEVKEVCQ ECPGL+IPQM P LYRC
Sbjct: 1   MATKERPVAAPKKPALTPKAIIHQKFGKNACYVVEEVKEVCQTECPGLSIPQMRPSLYRC 60

Query: 61  TLQLPELSVMSGTFKKKKDAEQCAAEMAIEKLGICSETGDPSPQEAQESLVSRLTYLFSE 120
           TLQLPEL+V+SGTFKKKKDAEQ AAEMAIEK+GI +ET D +PQEAQESLV+R+ Y+FSE
Sbjct: 61  TLQLPELTVVSGTFKKKKDAEQSAAEMAIEKIGIITETTDLTPQEAQESLVARIAYIFSE 120

Query: 121 KFLIPESDHPHPLSGHLRATLWRKGDLCGAVPVSSIAAYDPKIFSLCKCIDPEVESNPLL 180
           KFLI +    HPLSGH+RA+L  K D  G++P+S IA  D KIFSLCKCI+PEVESNP L
Sbjct: 121 KFLISD----HPLSGHIRASLRTKSDHYGSIPISVIAVCDAKIFSLCKCINPEVESNPFL 176

Query: 181 VISYIMRATAKLHGFLATSEQHLWVRKLSPYPQDVIESLMKEDGSRECIQVAAVCIPSSM 240
           V+ YI+R+  KL+ FL TSEQH+W+RKLSPYPQD+IESLM+   ++ECIQV A+ IPSSM
Sbjct: 177 VLPYIVRSATKLNEFLVTSEQHIWIRKLSPYPQDIIESLMELGDTQECIQVEAIRIPSSM 236

Query: 241 EKSVETVTLHISLREYYLDVIADKLGLDNGTNVMISRNLSKVSSETRLFFAAPKSHPLDP 300
           EK VE VTL +SLREYYLD+IA++LGL +G NV+ISRN+ K SSETRLFFAA +S+ LD 
Sbjct: 237 EKYVEAVTLRMSLREYYLDIIANELGLKDGANVLISRNIGKASSETRLFFAAQQSYLLDR 296

Query: 301 SSKFANGKETLHSEGSLNVRATYLSGQDIVGDAVLSSIGYTRKSRDLFFEDVTVRSYYRM 360
           S    NGKET     SLN RA YLSGQDIVGDA+L+ IGYTRKSRDLF+EDVTVR YYRM
Sbjct: 297 SFVSGNGKET----ESLNARARYLSGQDIVGDAILACIGYTRKSRDLFYEDVTVRLYYRM 352

Query: 361 LLGKTPEGIYKLSREAILAAELPSRFTTRANWRGSFPRDILLMFCRQHRLSEPLFSVVNP 420
           LLGKTP GIYKLSREA+L AELPSRFTTR NWRGS PRDIL MFCRQHRLSEPLFS+++ 
Sbjct: 353 LLGKTPGGIYKLSREALLTAELPSRFTTRVNWRGSLPRDILCMFCRQHRLSEPLFSIISH 412

Query: 421 PLKV-----------ADAGTKATEHVNGASGTASPKQSDKEVFKCEIKLLSRLEDIILLC 469
           PLK+           A +GT   E VNGAS    PKQSD  +FKCEIKLLSR  ++ILLC
Sbjct: 413 PLKIPTESSESCFKAAGSGTDVIECVNGASVNGCPKQSDSGMFKCEIKLLSRCAEVILLC 472

Query: 470 SPEDCFKKQNDAIQNASLKILSWLNKYFKSMTVSIEGLYETAGNFNIQICSQNLLRDILA 529
           SP+DC+KKQNDAIQNASLK+LSWLNKYF S+T   E LYETAGNF+I + S+NL R+IL 
Sbjct: 473 SPDDCYKKQNDAIQNASLKLLSWLNKYFNSVTAPFEQLYETAGNFSIHVFSKNLFREILI 532

Query: 530 GQSIRDCQLNAIQCNELLEPICINSSYDMTGNGGCSLKIEGLDSGVYPSNGSLPCISYSV 589
           GQSI++  L A+QCN+ LEP+C NS  DM  NG C+LKIEG DSGV P NGSLPCISYSV
Sbjct: 533 GQSIQNRHLYAMQCNKSLEPMCANSLQDMLVNGVCNLKIEGPDSGVCPCNGSLPCISYSV 592

Query: 590 SLVVEGENMKEVIEGCNEFEFEMGVGAVIPSVEEVVMQMSVGQCAYFTTNLVTSDLIFAS 649
           SLVVEGENMKEVIE CNEFEFE+GVGAVI  +EEVVMQMSVGQCAYF TNL+TSDLIFAS
Sbjct: 593 SLVVEGENMKEVIESCNEFEFEIGVGAVISYIEEVVMQMSVGQCAYFNTNLLTSDLIFAS 652

Query: 650 VGDSVKMLSLLSSKTFCVEYEISLTKVAEPPEERMEQALFSPPLSKQRVEFAVQQIVESR 709
            GDS KM S LSSK  CVEYEISLTKVAEPPEERMEQALFSPPLSKQRVEFAVQ I+ES 
Sbjct: 653 AGDSAKM-SSLSSKACCVEYEISLTKVAEPPEERMEQALFSPPLSKQRVEFAVQHILESH 711

Query: 710 ATSLVDFGCGSGSLLEALLNYTISLEKIVGVDISQKGLARAAKVLNSKLVTN--AGVQQT 767
           AT+L+DFGCGSGSLLEALLNYT SLEKI GVDISQKGL RAAKVLNSKL  N  AGV + 
Sbjct: 712 ATTLLDFGCGSGSLLEALLNYTTSLEKIAGVDISQKGLTRAAKVLNSKLDANPDAGVTRI 771

Query: 768 NIQSITFYEGSITSFDSRLHGFDIGTCLEVIEHMDEDQACLFGDVALSCFCPRILIVSTP 827
           +I+S+  YEGSIT+FDSRLHGFDIGTCLEVIEHMDEDQACLFG+VALS FCP+ILIVSTP
Sbjct: 772 DIKSVILYEGSITNFDSRLHGFDIGTCLEVIEHMDEDQACLFGNVALSYFCPKILIVSTP 831

Query: 828 NFEYNVVLQKSNPSTQDEEDSDEKTLLQSCKFRNHDHKFEWTREQFEQWASDLAARHNYS 887
           NFEYNVVLQKSNP TQ++E+ D +TLLQSCKFRN+DHKFEWTREQF QWASDLAARHNY+
Sbjct: 832 NFEYNVVLQKSNPPTQEQEELDGQTLLQSCKFRNNDHKFEWTREQFNQWASDLAARHNYN 891

Query: 888 VEFSGVGGSADVEPGFASQIAVFKRDWKLEDDILKQA-DTERHYNVIWEWNS 938
           V+FSGVGG ADVEPGFASQIAVFKR+W  ED++     D + HYNVIWEW+S
Sbjct: 892 VKFSGVGGFADVEPGFASQIAVFKREWSHEDEVQTHTDDIDSHYNVIWEWSS 943


>Medtr4g094545.2 | small RNA methyltransferase | HC |
           chr4:38204603-38199083 | 20130731
          Length = 731

 Score = 1108 bits (2866), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 551/733 (75%), Positives = 615/733 (83%), Gaps = 19/733 (2%)

Query: 220 MKEDGSRECIQVAAVCIPSSMEKSVETVTLHISLREYYLDVIADKLGLDNGTNVMISRNL 279
           M+   ++ECIQV A+ IPSSMEK VE VTL +SLREYYLD+IA++LGL +G NV+ISRN+
Sbjct: 1   MELGDTQECIQVEAIRIPSSMEKYVEAVTLRMSLREYYLDIIANELGLKDGANVLISRNI 60

Query: 280 SKVSSETRLFFAAPKSHPLDPSSKFANGKETLHSEGSLNVRATYLSGQDIVGDAVLSSIG 339
            K SSETRLFFAA +S+ LD S    NGKET     SLN RA YLSGQDIVGDA+L+ IG
Sbjct: 61  GKASSETRLFFAAQQSYLLDRSFVSGNGKET----ESLNARARYLSGQDIVGDAILACIG 116

Query: 340 YTRKSRDLFFEDVTVRSYYRMLLGKTPEGIYKLSREAILAAELPSRFTTRANWRGSFPRD 399
           YTRKSRDLF+EDVTVR YYRMLLGKTP GIYKLSREA+L AELPSRFTTR NWRGS PRD
Sbjct: 117 YTRKSRDLFYEDVTVRLYYRMLLGKTPGGIYKLSREALLTAELPSRFTTRVNWRGSLPRD 176

Query: 400 ILLMFCRQHRLSEPLFSVVNPPLKV-----------ADAGTKATEHVNGASGTASPKQSD 448
           IL MFCRQHRLSEPLFS+++ PLK+           A +GT   E VNGAS    PKQSD
Sbjct: 177 ILCMFCRQHRLSEPLFSIISHPLKIPTESSESCFKAAGSGTDVIECVNGASVNGCPKQSD 236

Query: 449 KEVFKCEIKLLSRLEDIILLCSPEDCFKKQNDAIQNASLKILSWLNKYFKSMTVSIEGLY 508
             +FKCEIKLLSR  ++ILLCSP+DC+KKQNDAIQNASLK+LSWLNKYF S+T   E LY
Sbjct: 237 SGMFKCEIKLLSRCAEVILLCSPDDCYKKQNDAIQNASLKLLSWLNKYFNSVTAPFEQLY 296

Query: 509 ETAGNFNIQICSQNLLRDILAGQSIRDCQLNAIQCNELLEPICINSSYDMTGNGGCSLKI 568
           ETAGNF+I + S+NL R+IL GQSI++  L A+QCN+ LEP+C NS  DM  NG C+LKI
Sbjct: 297 ETAGNFSIHVFSKNLFREILIGQSIQNRHLYAMQCNKSLEPMCANSLQDMLVNGVCNLKI 356

Query: 569 EGLDSGVYPSNGSLPCISYSVSLVVEGENMKEVIEGCNEFEFEMGVGAVIPSVEEVVMQM 628
           EG DSGV P NGSLPCISYSVSLVVEGENMKEVIE CNEFEFE+GVGAVI  +EEVVMQM
Sbjct: 357 EGPDSGVCPCNGSLPCISYSVSLVVEGENMKEVIESCNEFEFEIGVGAVISYIEEVVMQM 416

Query: 629 SVGQCAYFTTNLVTSDLIFASVGDSVKMLSLLSSKTFCVEYEISLTKVAEPPEERMEQAL 688
           SVGQCAYF TNL+TSDLIFAS GDS KM S LSSK  CVEYEISLTKVAEPPEERMEQAL
Sbjct: 417 SVGQCAYFNTNLLTSDLIFASAGDSAKM-SSLSSKACCVEYEISLTKVAEPPEERMEQAL 475

Query: 689 FSPPLSKQRVEFAVQQIVESRATSLVDFGCGSGSLLEALLNYTISLEKIVGVDISQKGLA 748
           FSPPLSKQRVEFAVQ I+ES AT+L+DFGCGSGSLLEALLNYT SLEKI GVDISQKGL 
Sbjct: 476 FSPPLSKQRVEFAVQHILESHATTLLDFGCGSGSLLEALLNYTTSLEKIAGVDISQKGLT 535

Query: 749 RAAKVLNSKLVTN--AGVQQTNIQSITFYEGSITSFDSRLHGFDIGTCLEVIEHMDEDQA 806
           RAAKVLNSKL  N  AGV + +I+S+  YEGSIT+FDSRLHGFDIGTCLEVIEHMDEDQA
Sbjct: 536 RAAKVLNSKLDANPDAGVTRIDIKSVILYEGSITNFDSRLHGFDIGTCLEVIEHMDEDQA 595

Query: 807 CLFGDVALSCFCPRILIVSTPNFEYNVVLQKSNPSTQDEEDSDEKTLLQSCKFRNHDHKF 866
           CLFG+VALS FCP+ILIVSTPNFEYNVVLQKSNP TQ++E+ D +TLLQSCKFRN+DHKF
Sbjct: 596 CLFGNVALSYFCPKILIVSTPNFEYNVVLQKSNPPTQEQEELDGQTLLQSCKFRNNDHKF 655

Query: 867 EWTREQFEQWASDLAARHNYSVEFSGVGGSADVEPGFASQIAVFKRDWKLEDDILKQA-D 925
           EWTREQF QWASDLAARHNY+V+FSGVGG ADVEPGFASQIAVFKR+W  ED++     D
Sbjct: 656 EWTREQFNQWASDLAARHNYNVKFSGVGGFADVEPGFASQIAVFKREWSHEDEVQTHTDD 715

Query: 926 TERHYNVIWEWNS 938
            + HYNVIWEW+S
Sbjct: 716 IDSHYNVIWEWSS 728