Miyakogusa Predicted Gene

Lj4g3v0281190.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0281190.3 Non Characterized Hit- tr|O82065|O82065_SOLTU
Putative outward rectifying potassium channel StKCO1a
,26.88,0.04,seg,NULL; Voltage-gated potassium channels,NULL; PROBABLE
CALCIUM-ACTIVATED OUTWARD-RECTIFYING POTAS,CUFF.46792.3
         (204 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094582.1 | outward rectifying potassium channel protein |...   362   e-100
Medtr7g110600.1 | outward rectifying potassium channel protein |...   248   3e-66
Medtr5g091565.1 | outward rectifying potassium channel protein |...   210   8e-55
Medtr4g133870.1 | outward rectifying potassium channel protein |...   137   5e-33
Medtr5g095650.2 | outward rectifying potassium channel protein |...   133   9e-32
Medtr5g095650.1 | outward rectifying potassium channel protein |...   133   9e-32

>Medtr4g094582.1 | outward rectifying potassium channel protein | HC
           | chr4:38278110-38286225 | 20130731
          Length = 418

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/203 (85%), Positives = 182/203 (89%)

Query: 1   MVSYVLDLQENHLLRAVKGRGEKDGKSYIIDVKKGRMRIRMKXXXXXXXXXXXXXXXXXX 60
           MVSYVLDLQENHLLR VKGRG KDG+SYI+DVKKGRMRIRMK                  
Sbjct: 216 MVSYVLDLQENHLLRTVKGRGAKDGRSYIVDVKKGRMRIRMKVALALGVVVLCIGLGVTV 275

Query: 61  MHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEA 120
           MHFVERLGWVDSFYLSVMSVTTVGYGDHAFKT+HGRIFAAIWLLVSTLAVARAFLYLAEA
Sbjct: 276 MHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTLHGRIFAAIWLLVSTLAVARAFLYLAEA 335

Query: 121 RVDKRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMEVSE 180
           RVDKRHRRMAKW+LGQDMTVAEFLAAD+DNNGFVSKSEYVIYKLKEMGKVTEKDIM++SE
Sbjct: 336 RVDKRHRRMAKWILGQDMTVAEFLAADMDNNGFVSKSEYVIYKLKEMGKVTEKDIMQISE 395

Query: 181 KFDRLDAGNCGKITLGDLMEGHN 203
           KFDRLD GNCGKITLGDLMEGH+
Sbjct: 396 KFDRLDTGNCGKITLGDLMEGHS 418


>Medtr7g110600.1 | outward rectifying potassium channel protein | HC
           | chr7:45328955-45326338 | 20130731
          Length = 382

 Score =  248 bits (633), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 120/206 (58%), Positives = 157/206 (76%), Gaps = 4/206 (1%)

Query: 1   MVSYVLDLQENHLLRAVKGRGEKDG---KSYIIDVKKGRMRIRMKXXXXXXXXXXXXXXX 57
           +V++VLDLQEN +L  ++  G ++G   + YI+DV KGRMRIR+K               
Sbjct: 178 LVNFVLDLQENTILTGLQ-MGAREGFTARDYIVDVAKGRMRIRLKVGLALGVVVLCIGVG 236

Query: 58  XXXMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYL 117
              + FVE L WVDS YL+VMSVTTVGYGD AFKT+ GR+FAAIWLL STL VARAFLYL
Sbjct: 237 SLVLCFVEGLDWVDSIYLAVMSVTTVGYGDRAFKTLPGRLFAAIWLLFSTLMVARAFLYL 296

Query: 118 AEARVDKRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIME 177
           AEAR+D+RHRR+AK VL +++T+ ++LAADI+N GF+SKSEYVI+KLKEMGK+ +KD+M+
Sbjct: 297 AEARIDRRHRRLAKKVLHREITIEDWLAADINNTGFISKSEYVIFKLKEMGKIQDKDVMQ 356

Query: 178 VSEKFDRLDAGNCGKITLGDLMEGHN 203
           + ++F +LD  NCGKITL  L+EG +
Sbjct: 357 ICDQFRKLDPSNCGKITLPHLLEGRS 382


>Medtr5g091565.1 | outward rectifying potassium channel protein | HC
           | chr5:39924920-39923156 | 20130731
          Length = 383

 Score =  210 bits (534), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 103/201 (51%), Positives = 141/201 (70%), Gaps = 1/201 (0%)

Query: 1   MVSYVLDLQENHLLRAVKG-RGEKDGKSYIIDVKKGRMRIRMKXXXXXXXXXXXXXXXXX 59
           +V ++ D  E  LL  + G + +K  ++Y++D KKGRMRIR K                 
Sbjct: 181 LVVHICDTHEAFLLSMMGGDKYKKILRTYMVDEKKGRMRIRTKVCVALVVVIVCIAIGTV 240

Query: 60  XMHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAE 119
             HFVE L W DSFYLS+ SVTTVGYGD++F+T+ GR FA +WLLVST +V+RAF+YL +
Sbjct: 241 TAHFVENLNWADSFYLSITSVTTVGYGDYSFRTLTGRCFAILWLLVSTFSVSRAFIYLTD 300

Query: 120 ARVDKRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMEVS 179
             + KR R+MAK VL + +T+++  AAD+DN+G +SKS++VIYKLK+MGK+TE DIM++S
Sbjct: 301 YSMQKRSRKMAKMVLQKKITLSDLAAADLDNDGSISKSDFVIYKLKQMGKITEMDIMQIS 360

Query: 180 EKFDRLDAGNCGKITLGDLME 200
           ++FD LD G  GKI L DLME
Sbjct: 361 KQFDSLDHGMYGKIALADLME 381


>Medtr4g133870.1 | outward rectifying potassium channel protein | HC
           | chr4:55993276-55996041 | 20130731
          Length = 353

 Score =  137 bits (346), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 62/138 (44%), Positives = 94/138 (68%)

Query: 61  MHFVERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEA 120
           ++F+E L +VD+ Y    +VTT+GYGD +F T  GRIFA  W+L ST+ +A++F YLAE 
Sbjct: 210 LYFIENLDFVDALYCVCSTVTTLGYGDKSFSTAAGRIFAVFWILSSTICLAQSFAYLAEL 269

Query: 121 RVDKRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMEVSE 180
             + R R +AK VL + +++++  AAD+D +  VS +E+V+YKLKEMGK+ ++DI  V E
Sbjct: 270 YTEDRQRSLAKMVLTRKLSLSDLEAADLDGDKAVSAAEFVVYKLKEMGKINQEDISAVME 329

Query: 181 KFDRLDAGNCGKITLGDL 198
            F +LD    G +T  D+
Sbjct: 330 SFRKLDCDQSGTLTEADI 347


>Medtr5g095650.2 | outward rectifying potassium channel protein | HC
           | chr5:41807536-41811170 | 20130731
          Length = 349

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 91/135 (67%)

Query: 64  VERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVD 123
           VE+L  +D+FY    ++TT+GYGD +F T  GRIFA  W+L  T+ +A+ FLY+AE   +
Sbjct: 209 VEKLEVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICLAQFFLYMAELNTE 268

Query: 124 KRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMEVSEKFD 183
            R + +  WVL + MT  +  AAD+D +G V  +E+VIYKLKEMGK++++DI  V ++F+
Sbjct: 269 SRQKALVNWVLTRKMTNYDLEAADLDEDGTVGAAEFVIYKLKEMGKISQEDITLVMKEFE 328

Query: 184 RLDAGNCGKITLGDL 198
            LD    G +++ D+
Sbjct: 329 ELDIDQSGTLSVSDI 343


>Medtr5g095650.1 | outward rectifying potassium channel protein | HC
           | chr5:41807536-41811156 | 20130731
          Length = 349

 Score =  133 bits (335), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 59/135 (43%), Positives = 91/135 (67%)

Query: 64  VERLGWVDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVD 123
           VE+L  +D+FY    ++TT+GYGD +F T  GRIFA  W+L  T+ +A+ FLY+AE   +
Sbjct: 209 VEKLEVIDAFYCVCSTITTLGYGDKSFSTQAGRIFAVFWILTGTICLAQFFLYMAELNTE 268

Query: 124 KRHRRMAKWVLGQDMTVAEFLAADIDNNGFVSKSEYVIYKLKEMGKVTEKDIMEVSEKFD 183
            R + +  WVL + MT  +  AAD+D +G V  +E+VIYKLKEMGK++++DI  V ++F+
Sbjct: 269 SRQKALVNWVLTRKMTNYDLEAADLDEDGTVGAAEFVIYKLKEMGKISQEDITLVMKEFE 328

Query: 184 RLDAGNCGKITLGDL 198
            LD    G +++ D+
Sbjct: 329 ELDIDQSGTLSVSDI 343