Miyakogusa Predicted Gene

Lj4g3v0279770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0279770.1 Non Characterized Hit- tr|I3S3W7|I3S3W7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.28,0,DUF561,Uncharacterised protein family Ycf23; seg,NULL; no
description,Aldolase-type TIM barrel; Aldo,CUFF.46789.1
         (279 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g094625.1 | thiamine monophosphate synthase | HC | chr4:38...   435   e-122

>Medtr4g094625.1 | thiamine monophosphate synthase | HC |
           chr4:38404699-38401265 | 20130731
          Length = 307

 Score =  435 bits (1119), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/288 (78%), Positives = 240/288 (83%), Gaps = 15/288 (5%)

Query: 1   MHSLTCTPVS--------SPSHTXXXXXXXXXXXGSTWRPCP-PLKRRACFTTRALLSST 51
           MHSLTC  +S         P+H            G+  +PC   LKR+  FTTRALLSST
Sbjct: 1   MHSLTCLTLSSPSSISSLKPNHNYNPLL------GAASKPCLLTLKRKTSFTTRALLSST 54

Query: 52  KETVLKDFQERRALKIISGLHNFDKDNVASVVTAADKGGATHVDIACDPELVKLAISLTS 111
           KE+VLKDF+ER ALKII+GL NFDKDNVASVVTAA+KGGATHVDIACDPELVKLAISLTS
Sbjct: 55  KESVLKDFRERTALKIITGLQNFDKDNVASVVTAAEKGGATHVDIACDPELVKLAISLTS 114

Query: 112 CPVCVSSVDPATFPAAVEAGALMVEIGNYDSFYEKGVVFTPEQILILTKETRRLLPSIAL 171
           CPVCVSSVDPATFPAAVEAGALMVEIGNYDSFYEKGV+FTPEQIL LTKETRR+LPS+ L
Sbjct: 115 CPVCVSSVDPATFPAAVEAGALMVEIGNYDSFYEKGVIFTPEQILSLTKETRRILPSVVL 174

Query: 172 SVTVPHTLSLPDQVKLAELLEQEGVDIIQTEGGKCSNPTKSGILGLIEKATPTLAAAYSI 231
           SVTVPHTLSLPDQVKLAE LE EGVDIIQTEGGKCSNPTKSG+LGLIEKATPTLAAAYSI
Sbjct: 175 SVTVPHTLSLPDQVKLAESLELEGVDIIQTEGGKCSNPTKSGVLGLIEKATPTLAAAYSI 234

Query: 232 SRAVKIPVMCSSGLSAVTAPMAITXXXXXXXXXXXXNRLNDVVAMIAE 279
           SRAVKIPVMCSSGLSAVTAPMAIT            N+LNDVVAMIAE
Sbjct: 235 SRAVKIPVMCSSGLSAVTAPMAITAGASGVGVGSAVNKLNDVVAMIAE 282