Miyakogusa Predicted Gene

Lj4g3v0268700.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0268700.1 Non Characterized Hit- tr|I3SP22|I3SP22_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,80.39,0.00000000000002,DUF1084,Domain of unknown function DUF1084;
seg,NULL,CUFF.46761.1
         (355 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g096650.1 | plant/F17J16-140 protein | HC | chr4:38446874-...   535   e-152
Medtr4g096650.2 | plant/F17J16-140 protein | HC | chr4:38446874-...   522   e-148
Medtr4g096650.4 | plant/F17J16-140 protein | HC | chr4:38451652-...   411   e-115
Medtr4g096650.3 | plant/F17J16-140 protein | HC | chr4:38451652-...   397   e-111
Medtr5g091370.1 | plant/F17J16-140 protein | HC | chr5:39820050-...   260   2e-69
Medtr5g091370.2 | plant/F17J16-140 protein | HC | chr5:39819931-...   164   1e-40

>Medtr4g096650.1 | plant/F17J16-140 protein | HC |
           chr4:38446874-38455756 | 20130731
          Length = 355

 Score =  535 bits (1379), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/355 (73%), Positives = 287/355 (80%)

Query: 1   MSGFRDGLCFPHPIXXXXXXXXXXXXXXXXXXSFQLLRIHKRNSHHGWTRQKVFHLLIGS 60
           M+GF  G CFP+P+                  + Q LRIH R+   GWTRQKVFHLLIGS
Sbjct: 1   MAGFGGGHCFPYPLFAVIIVLAIVHAILASIATIQSLRIHLRSLQLGWTRQKVFHLLIGS 60

Query: 61  SNWGYFIYLALTLVAACKGWTCWSHSCGFIFMAFPKVIXXXXXXXXXSFWVDLCHQPNDD 120
           SNWGY IYLAL L+AACKGWT WSHSCGFIFMA PKV+         SFWVDLCHQP+DD
Sbjct: 61  SNWGYSIYLALILLAACKGWTYWSHSCGFIFMALPKVLFFAAFLLLLSFWVDLCHQPDDD 120

Query: 121 DDYEGSFSEELLLEKPSNIANLANMERHRKWFPVRFSRFGNRQKIVILVTLLVFITMMAF 180
           DDYEGSFSEE LL K SN   L N +RHRK FP+RFSR G RQKIV LV LL+FIT++AF
Sbjct: 121 DDYEGSFSEEPLLGKTSNELILTNRDRHRKCFPIRFSRLGYRQKIVTLVMLLLFITIVAF 180

Query: 181 AVIIWIGLGKNPIDSEAATRVYLDLSAIGMLFLAGALACYGILLCVKMSKVRAEKPSSEM 240
           AVIIWIGLGKNPIDSE A RVYLD+SAIGML L GALACYGILLC+KMSKVRAEKPSSEM
Sbjct: 181 AVIIWIGLGKNPIDSEVAARVYLDISAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEM 240

Query: 241 WKVAGLTIVSVLCFTSSSCVELLTDIPMLYHWHQRQFNDVYTSLLLILYYFVGSSMPSAV 300
            KVAGLTIVSVLCFTSSSC+EL TDIPM++HWHQ++ NDVY SLLLILY+FVGSS+PSAV
Sbjct: 241 GKVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAV 300

Query: 301 ILWVMRELPAVEARDVLEESSTLAFVANSSVAIHHPQRWTAATSAQNQTSRASPI 355
           +LWVMRELP  EA DV+EESST+AFVANSSVA HHP+ WT ATS QNQTSRASPI
Sbjct: 301 VLWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQTSRASPI 355


>Medtr4g096650.2 | plant/F17J16-140 protein | HC |
           chr4:38446874-38455721 | 20130731
          Length = 348

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 254/348 (72%), Positives = 280/348 (80%)

Query: 1   MSGFRDGLCFPHPIXXXXXXXXXXXXXXXXXXSFQLLRIHKRNSHHGWTRQKVFHLLIGS 60
           M+GF  G CFP+P+                  + Q LRIH R+   GWTRQKVFHLLIGS
Sbjct: 1   MAGFGGGHCFPYPLFAVIIVLAIVHAILASIATIQSLRIHLRSLQLGWTRQKVFHLLIGS 60

Query: 61  SNWGYFIYLALTLVAACKGWTCWSHSCGFIFMAFPKVIXXXXXXXXXSFWVDLCHQPNDD 120
           SNWGY IYLAL L+AACKGWT WSHSCGFIFMA PKV+         SFWVDLCHQP+DD
Sbjct: 61  SNWGYSIYLALILLAACKGWTYWSHSCGFIFMALPKVLFFAAFLLLLSFWVDLCHQPDDD 120

Query: 121 DDYEGSFSEELLLEKPSNIANLANMERHRKWFPVRFSRFGNRQKIVILVTLLVFITMMAF 180
           DDYEGSFSEE LL K SN   L N +RHRK FP+RFSR G RQKIV LV LL+FIT++AF
Sbjct: 121 DDYEGSFSEEPLLGKTSNELILTNRDRHRKCFPIRFSRLGYRQKIVTLVMLLLFITIVAF 180

Query: 181 AVIIWIGLGKNPIDSEAATRVYLDLSAIGMLFLAGALACYGILLCVKMSKVRAEKPSSEM 240
           AVIIWIGLGKNPIDSE A RVYLD+SAIGML L GALACYGILLC+KMSKVRAEKPSSEM
Sbjct: 181 AVIIWIGLGKNPIDSEVAARVYLDISAIGMLLLGGALACYGILLCLKMSKVRAEKPSSEM 240

Query: 241 WKVAGLTIVSVLCFTSSSCVELLTDIPMLYHWHQRQFNDVYTSLLLILYYFVGSSMPSAV 300
            KVAGLTIVSVLCFTSSSC+EL TDIPM++HWHQ++ NDVY SLLLILY+FVGSS+PSAV
Sbjct: 241 GKVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYFFVGSSIPSAV 300

Query: 301 ILWVMRELPAVEARDVLEESSTLAFVANSSVAIHHPQRWTAATSAQNQ 348
           +LWVMRELP  EA DV+EESST+AFVANSSVA HHP+ WT ATS QNQ
Sbjct: 301 VLWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQ 348


>Medtr4g096650.4 | plant/F17J16-140 protein | HC |
           chr4:38451652-38455721 | 20130731
          Length = 254

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/245 (80%), Positives = 217/245 (88%)

Query: 111 VDLCHQPNDDDDYEGSFSEELLLEKPSNIANLANMERHRKWFPVRFSRFGNRQKIVILVT 170
           VDLCHQP+DDDDYEGSFSEE LL K SN   L N +RHRK FP+RFSR G RQKIV LV 
Sbjct: 10  VDLCHQPDDDDDYEGSFSEEPLLGKTSNELILTNRDRHRKCFPIRFSRLGYRQKIVTLVM 69

Query: 171 LLVFITMMAFAVIIWIGLGKNPIDSEAATRVYLDLSAIGMLFLAGALACYGILLCVKMSK 230
           LL+FIT++AFAVIIWIGLGKNPIDSE A RVYLD+SAIGML L GALACYGILLC+KMSK
Sbjct: 70  LLLFITIVAFAVIIWIGLGKNPIDSEVAARVYLDISAIGMLLLGGALACYGILLCLKMSK 129

Query: 231 VRAEKPSSEMWKVAGLTIVSVLCFTSSSCVELLTDIPMLYHWHQRQFNDVYTSLLLILYY 290
           VRAEKPSSEM KVAGLTIVSVLCFTSSSC+EL TDIPM++HWHQ++ NDVY SLLLILY+
Sbjct: 130 VRAEKPSSEMGKVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYF 189

Query: 291 FVGSSMPSAVILWVMRELPAVEARDVLEESSTLAFVANSSVAIHHPQRWTAATSAQNQTS 350
           FVGSS+PSAV+LWVMRELP  EA DV+EESST+AFVANSSVA HHP+ WT ATS QNQTS
Sbjct: 190 FVGSSIPSAVVLWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQTS 249

Query: 351 RASPI 355
           RASPI
Sbjct: 250 RASPI 254


>Medtr4g096650.3 | plant/F17J16-140 protein | HC |
           chr4:38451652-38455721 | 20130731
          Length = 247

 Score =  397 bits (1021), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 191/238 (80%), Positives = 210/238 (88%)

Query: 111 VDLCHQPNDDDDYEGSFSEELLLEKPSNIANLANMERHRKWFPVRFSRFGNRQKIVILVT 170
           VDLCHQP+DDDDYEGSFSEE LL K SN   L N +RHRK FP+RFSR G RQKIV LV 
Sbjct: 10  VDLCHQPDDDDDYEGSFSEEPLLGKTSNELILTNRDRHRKCFPIRFSRLGYRQKIVTLVM 69

Query: 171 LLVFITMMAFAVIIWIGLGKNPIDSEAATRVYLDLSAIGMLFLAGALACYGILLCVKMSK 230
           LL+FIT++AFAVIIWIGLGKNPIDSE A RVYLD+SAIGML L GALACYGILLC+KMSK
Sbjct: 70  LLLFITIVAFAVIIWIGLGKNPIDSEVAARVYLDISAIGMLLLGGALACYGILLCLKMSK 129

Query: 231 VRAEKPSSEMWKVAGLTIVSVLCFTSSSCVELLTDIPMLYHWHQRQFNDVYTSLLLILYY 290
           VRAEKPSSEM KVAGLTIVSVLCFTSSSC+EL TDIPM++HWHQ++ NDVY SLLLILY+
Sbjct: 130 VRAEKPSSEMGKVAGLTIVSVLCFTSSSCIELFTDIPMMFHWHQQRMNDVYASLLLILYF 189

Query: 291 FVGSSMPSAVILWVMRELPAVEARDVLEESSTLAFVANSSVAIHHPQRWTAATSAQNQ 348
           FVGSS+PSAV+LWVMRELP  EA DV+EESST+AFVANSSVA HHP+ WT ATS QNQ
Sbjct: 190 FVGSSIPSAVVLWVMRELPPAEAADVVEESSTIAFVANSSVAAHHPRSWTTATSMQNQ 247


>Medtr5g091370.1 | plant/F17J16-140 protein | HC |
           chr5:39820050-39823455 | 20130731
          Length = 363

 Score =  260 bits (664), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 141/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 35  QLLRIHKRNSHHGWTRQKVFHLLIGSSNWGYFIYLALTLVAACKGWTCWSHSCGFIFMAF 94
           Q+LRIH R+   GWTRQKV H+++ +SN GY +Y A T+ A C GW CW   CGFI MA 
Sbjct: 33  QVLRIHMRSRQIGWTRQKVLHIMVATSNLGYCVYFASTVFATCNGWYCWYGVCGFILMAS 92

Query: 95  PKVIXXXXXXXXXSFWVDLCHQPNDDDDYEGSF----SEELLLEKPSNIANLANMERHRK 150
           PKV+         SFWVD CHQ N+++  +       +++ LLE       L  ++  R+
Sbjct: 93  PKVMFLAAFLLLLSFWVDHCHQENEEELDDEDNVENRTQQALLEGMREQHGLGPIKSSRR 152

Query: 151 WFPVRFSRFGNRQKIVILVTLLVFITMMAFAVIIWIGLGKNPIDSEAATRVYLDLSAIGM 210
              ++    G+RQK V+++ +L+F  MMAFA++I +G   NPID     RVY    A+ +
Sbjct: 153 CCSIQGVHIGSRQKYVVMIVVLIFAVMMAFAILICVGNDTNPIDPSIVARVYESFLAVMI 212

Query: 211 LFLAGALACYGILLCVKMSKVRAEKPSSEMWKVAGLTIVSVLCFTSSSCVELLTDIPMLY 270
           + LAGAL CYG+ L  K+ KVR+E  SSEMWKV  L I+S++ F+SS+ V L TDIP+ Y
Sbjct: 213 IILAGALGCYGLFLFFKLRKVRSENASSEMWKVISLAIISIVSFSSSALVALNTDIPLFY 272

Query: 271 HWHQRQFNDVYTSLLLILYYFVGSSMPSAVILWVMRELPAVEARDVLEE-SSTLAFVANS 329
           HWH +    V   + LI+YYF+GSS+PSA +LW++RE+P      + EE   T  F++++
Sbjct: 273 HWHLKFIYGVKAFVYLIIYYFIGSSLPSAYLLWIIREMPPPGIDSIQEEPGGTYTFISHA 332

Query: 330 SVAIH--HPQRWTAATSAQNQTSRA 352
             A    HP  WTA TS++NQ +R+
Sbjct: 333 DEASGSIHPWSWTADTSSKNQITRS 357


>Medtr5g091370.2 | plant/F17J16-140 protein | HC |
           chr5:39819931-39823890 | 20130731
          Length = 317

 Score =  164 bits (415), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 83/196 (42%), Positives = 117/196 (59%), Gaps = 4/196 (2%)

Query: 35  QLLRIHKRNSHHGWTRQKVFHLLIGSSNWGYFIYLALTLVAACKGWTCWSHSCGFIFMAF 94
           Q+LRIH R+   GWTRQKV H+++ +SN GY +Y A T+ A C GW CW   CGFI MA 
Sbjct: 33  QVLRIHMRSRQIGWTRQKVLHIMVATSNLGYCVYFASTVFATCNGWYCWYGVCGFILMAS 92

Query: 95  PKVIXXXXXXXXXSFWVDLCHQPNDDDDYEGSF----SEELLLEKPSNIANLANMERHRK 150
           PKV+         SFWVD CHQ N+++  +       +++ LLE       L  ++  R+
Sbjct: 93  PKVMFLAAFLLLLSFWVDHCHQENEEELDDEDNVENRTQQALLEGMREQHGLGPIKSSRR 152

Query: 151 WFPVRFSRFGNRQKIVILVTLLVFITMMAFAVIIWIGLGKNPIDSEAATRVYLDLSAIGM 210
              ++    G+RQK V+++ +L+F  MMAFA++I +G   NPID     RVY    A+ +
Sbjct: 153 CCSIQGVHIGSRQKYVVMIVVLIFAVMMAFAILICVGNDTNPIDPSIVARVYESFLAVMI 212

Query: 211 LFLAGALACYGILLCV 226
           + LAGAL CYG LLC+
Sbjct: 213 IILAGALGCYGKLLCI 228