Miyakogusa Predicted Gene
- Lj4g3v0258680.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0258680.1 Non Characterized Hit- tr|G7JFG1|G7JFG1_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,82.83,0,NAD(P)-binding Rossmann-fold domains,NULL; PUTATIVE
UDP-GALACTOSE 4-EPIMERASE,NULL; NAD DEPENDENT EP,CUFF.46769.1
(297 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g115730.1 | NAD-dependent epimerase/dehydratase family pro... 508 e-144
Medtr4g115730.2 | NAD-dependent epimerase/dehydratase family pro... 454 e-128
Medtr4g068970.1 | NAD-dependent epimerase/dehydratase family pro... 124 9e-29
Medtr7g062140.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 70 2e-12
Medtr4g021815.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 65 7e-11
Medtr8g010700.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 60 2e-09
Medtr8g087310.2 | NAD(P)-binding rossmann-fold protein | HC | ch... 56 3e-08
Medtr8g087310.1 | NAD(P)-binding rossmann-fold protein | HC | ch... 56 4e-08
Medtr4g064750.1 | plastid transcriptionally active protein | HC ... 53 4e-07
Medtr4g092080.1 | anthocyanidin reductase ANR1-1 | HC | chr4:365... 49 6e-06
>Medtr4g115730.1 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:47824137-47821684 | 20130731
Length = 292
Score = 508 bits (1307), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/297 (83%), Positives = 270/297 (90%), Gaps = 5/297 (1%)
Query: 1 MASPLITRNPSFHTLRSHTHQTNLFTATSSITTKSLSVLSFAKMEGSEQVAGKSGEEDLS 60
MA PLI RNP+FHT SHTH FTA SS TKSL++++FAKMEGSE + ++ ++DLS
Sbjct: 1 MAFPLIARNPTFHTFPSHTHH---FTAPSSFRTKSLTIINFAKMEGSE-ITQQAVDDDLS 56
Query: 61 VKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVTEG 120
+KKK+FVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDK +++LS+ NPSLQ VK DVTEG
Sbjct: 57 LKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTSLSA-NPSLQFVKVDVTEG 115
Query: 121 SDKLAEVIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRKINRFILVSSIL 180
SDKLAE IGDD+EAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRK +NRFIL+SSIL
Sbjct: 116 SDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSIL 175
Query: 181 VNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVM 240
VNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGL+NDPPTGNVVM
Sbjct: 176 VNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPTGNVVM 235
Query: 241 EPEDTLSQGSISRDHVAEVAVEALACPEASYKVVEIVSRPDAPKRTYHDLFGSIRQR 297
EPEDTL +GSISRD VAEVAVE+LA PEASYKVVEIV+RPDAPKR YHDLFGSI QR
Sbjct: 236 EPEDTLYEGSISRDQVAEVAVESLAYPEASYKVVEIVARPDAPKRAYHDLFGSIVQR 292
>Medtr4g115730.2 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:47824011-47821684 | 20130731
Length = 252
Score = 454 bits (1168), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/254 (86%), Positives = 238/254 (93%), Gaps = 2/254 (0%)
Query: 44 MEGSEQVAGKSGEEDLSVKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSAL 103
MEGSE + ++ ++DLS+KKK+FVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDK +++L
Sbjct: 1 MEGSE-ITQQAVDDDLSLKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTSL 59
Query: 104 SSTNPSLQIVKADVTEGSDKLAEVIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVE 163
S+ NPSLQ VK DVTEGSDKLAE IGDD+EAVVCATGFRPGWDLLAPWKVDNFGTVNLVE
Sbjct: 60 SA-NPSLQFVKVDVTEGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVE 118
Query: 164 ACRKRKINRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTI 223
ACRK +NRFIL+SSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTI
Sbjct: 119 ACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTI 178
Query: 224 IRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHVAEVAVEALACPEASYKVVEIVSRPDAP 283
IRPGGL+NDPPTGNVVMEPEDTL +GSISRD VAEVAVE+LA PEASYKVVEIV+RPDAP
Sbjct: 179 IRPGGLKNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVESLAYPEASYKVVEIVARPDAP 238
Query: 284 KRTYHDLFGSIRQR 297
KR YHDLFGSI QR
Sbjct: 239 KRAYHDLFGSIVQR 252
>Medtr4g068970.1 | NAD-dependent epimerase/dehydratase family
protein | HC | chr4:25897576-25892682 | 20130731
Length = 641
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 37/312 (11%)
Query: 10 PSFH-TLRSHTHQTNLFTATSSITTKSLSVLSFAKMEGSEQVAGKSG---EEDLSVKKKI 65
PS H L ++H N T+ + S + A++ GS + + G ++D +
Sbjct: 25 PSGHVNLSKYSHFINYPFTTTPCKNRIRSNIIRAQVSGSTKSSTAEGIPEKKDSKDDNLV 84
Query: 66 FVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDK--------------GRSALSSTNPSLQ 111
FVAGATG G R V +L+ GF V+AGVR + G S S L+
Sbjct: 85 FVAGATGKVGSRTVRELIKLGFKVRAGVRSAQRAGSLVQSVKQLKLDGTSGGSEAVEKLE 144
Query: 112 IVKADVTEGSDKLAEVIGDDSEAVVCATGF--RPGWDLLAPWKVDNFGTVNLVEACRKRK 169
IV+ D+ E +++ +G+ S V+C G + +D+ P+++D T NLV+A K
Sbjct: 145 IVECDL-EKPEQIKSALGNAS-TVICTIGASEKEIFDITGPYRIDYMATKNLVDAASVAK 202
Query: 170 INRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGL 229
+N FILV+S+ N PA I LN+F L K +AE + SG+ YTI+RPGG+
Sbjct: 203 VNHFILVTSLGTNKFGF-----PAAI-LNLFWGVLCWKRKAEEALLASGLPYTIVRPGGM 256
Query: 230 RNDPPTG------NVVMEPEDTLSQGSISRDHVAEVAVEALACPEASY-KVVEIVSRPDA 282
PT NV + EDTL G +S VAE+ PE SY K+VE+++ A
Sbjct: 257 ER--PTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMAAMAKNPELSYCKIVEVIAETTA 314
Query: 283 PKRTYHDLFGSI 294
P L I
Sbjct: 315 PLTPAEKLLAKI 326
>Medtr7g062140.1 | NAD(P)-binding rossmann-fold protein | HC |
chr7:22554242-22549588 | 20130731
Length = 329
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 33/261 (12%)
Query: 60 SVKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVTE 119
S K + V GA G TG+ + ++L + A R L + + + + D+ +
Sbjct: 78 SSKSTVLVTGAGGRTGQIVYKKLKERPNEYIA--RGLVRSEESKQKIGAADDVFIGDIRD 135
Query: 120 GSDKLAEVIGDDSEAVVCATG---FRPGWDLLA-------------PWKVDNFGTVNLVE 163
++ LA I ++ +G +PG+D P +VD G N ++
Sbjct: 136 -TESLAPAIQGIDALIILTSGVPLMKPGFDPTQGKRPEFYFEDGAYPEQVDWIGQKNQID 194
Query: 164 ACRKRKINRFILVSSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTI 223
A + + + +LV S+ G + LN G LV K +AE ++ SGI YTI
Sbjct: 195 AAKAAGVKQIVLVGSM--GGTDLNHPLNSLGD-----GNILVWKRKAEQYLADSGIPYTI 247
Query: 224 IRPGGLRN-DPPTGNVVMEPEDTLSQG---SISRDHVAEVAVEALACPEASYKVVEIVSR 279
IR GGL++ + +V+ +D L + +I+R VAEV ++AL EA +K ++ S+
Sbjct: 248 IRAGGLQDKEGGIRELVIGKDDELLKTDIRTIARPDVAEVCLQALNFEEAQFKAFDLASK 307
Query: 280 PD---APKRTYHDLFGSIRQR 297
P+ +P + + LF I R
Sbjct: 308 PEGTGSPTKDFKALFSQITTR 328
>Medtr4g021815.1 | NAD(P)-binding rossmann-fold protein | HC |
chr4:7291813-7296445 | 20130731
Length = 255
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 60 SVKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKAD-VT 118
S + + V GA G TG+ + ++L K RD R + S +I AD +
Sbjct: 4 SSQTTVLVTGAGGRTGQIVYKKLKEK--------RDQYIARGLVRSEESKQKIGGADDIF 55
Query: 119 EGSDKLAEVI-----GDDSEAVVCAT--GFRPGWDLLA-------------PWKVDNFGT 158
G + AE I G D+ ++ + +PG+D P +VD G
Sbjct: 56 LGDIRNAESIVPAIQGTDALIILTSAVPQMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQ 115
Query: 159 VNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYIFLNVFGL--TLVAKLQAENHIRK 216
N ++A + + +LV S MG NP + LN G LV K +AE ++
Sbjct: 116 KNQIDAAKAAGVKHIVLVGS-------MGGT-NPNHP-LNSLGNGNILVWKRKAEEYLSN 166
Query: 217 SGINYTIIRPGGLRN-DPPTGNVVMEPEDTLSQ---GSISRDHVAEVAVEALACPEASYK 272
SG+ YTIIRPGGL + + +++ +D L Q +I R VAEV V+ L E K
Sbjct: 167 SGVPYTIIRPGGLLDKEGGVRELIVGKDDELLQTETKTIPRADVAEVCVQVLNYEETKLK 226
Query: 273 VVEIVSRPDA---PKRTYHDLFGSIRQR 297
++ S+P+ P + + LF + R
Sbjct: 227 AFDLASKPEGAGEPTKDFKALFSQLTSR 254
>Medtr8g010700.1 | NAD(P)-binding rossmann-fold protein | HC |
chr8:2834119-2830976 | 20130731
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 82 LLAKGFAVKAGVRDLDKGRSALSSTNPS-LQIVKADVTEGSDKLAEVIGDDSEAVVCATG 140
LL + + +RDL+K ++ + LQ+ K D T D L + + V+C TG
Sbjct: 93 LLQRNIKSRLILRDLEKAKALFGEQDEEKLQVFKGD-TRKHDDLDPSMFEGVTHVICCTG 151
Query: 141 F-----RPGWDLLAPWKVDNFGTVNLVEACRKRKINRFILVSSILVNGAAMGQLLNPAYI 195
R D P +VD G NLV + R ILVSSI V +L +
Sbjct: 152 TTAFPSRRWDDENTPERVDWVGVKNLVSVL-PSSVKRVILVSSIGV--TKCNEL---PWS 205
Query: 196 FLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGN---------------VVM 240
+N+FG+ L K E ++ SG YTIIRPG L + P T V++
Sbjct: 206 IMNLFGV-LKYKKMGEEFLQNSGFPYTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLI 264
Query: 241 EPEDTLSQGSISRDHVAEVAVEALACPEASYKVVEIVS----RPDAPKRTYHDLFGSIR 295
D L G SR VAE V+AL ++ E+ S P + + +LF + R
Sbjct: 265 GQGDKLV-GEASRIVVAEACVQALDLEATENQIYEVNSVEGEGPGNDAQKWQELFEAGR 322
>Medtr8g087310.2 | NAD(P)-binding rossmann-fold protein | HC |
chr8:36100665-36095176 | 20130731
Length = 597
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 204 LVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHVAEVAVEA 263
L KL+ E+ IR+SGI Y I+RP L +P +++ + D ++ G ISR+ VA + V A
Sbjct: 479 LTYKLKGEDLIRESGIPYVIVRPCALTEEPAGADLIFDQGDNIT-GKISREEVARMCVAA 537
Query: 264 LACPEASYKVVEIVS 278
L P A K E+ S
Sbjct: 538 LESPYACDKTFEVKS 552
>Medtr8g087310.1 | NAD(P)-binding rossmann-fold protein | HC |
chr8:36100665-36095176 | 20130731
Length = 478
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 204 LVAKLQAENHIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLSQGSISRDHVAEVAVEA 263
L KL+ E+ IR+SGI Y I+RP L +P +++ + D ++ G ISR+ VA + V A
Sbjct: 360 LTYKLKGEDLIRESGIPYVIVRPCALTEEPAGADLIFDQGDNIT-GKISREEVARMCVAA 418
Query: 264 LACPEASYKVVEIVS 278
L P A K E+ S
Sbjct: 419 LESPYACDKTFEVKS 433
>Medtr4g064750.1 | plastid transcriptionally active protein | HC |
chr4:24211056-24213980 | 20130731
Length = 553
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 25/249 (10%)
Query: 65 IFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRSALSSTNPSLQIVKADVT------ 118
+FVAGATG G RI + LL +GF+V+AGV +L + L+ +I+ +
Sbjct: 102 VFVAGATGQAGIRIAQTLLREGFSVRAGVPELGSAQE-LARLASQYKIISNEEAKRLNAV 160
Query: 119 ----EGSDKLAEVIGDDSEAVVCATGFRPGWDLLAP-WKVDNFGTVNLVEACRKRKINRF 173
+ +D +A+ IG+ S+ VV G P +V + +++A + +
Sbjct: 161 QSSFDDADSIAKAIGNASKVVVTI-----GLTENGPATEVSTSDALQVIQAAQLAGVGHV 215
Query: 174 ILV--SSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQA-ENHIRKSGINYTIIRPGGLR 230
++ + V+ + L + F N+F + +Q + ++ + YT+I+
Sbjct: 216 AVIYDENNGVSTSTYNVLDGISSFFNNIFSKSQPLSIQEFLQKVVETDVKYTLIKTCLTD 275
Query: 231 NDPPTGN---VVMEPEDTLSQG-SISRDHVAEVAVEALACPE-ASYKVVEIVSRPDAPKR 285
+ P + VV+ E+T S +++ +A + + + + A KVV++ S P+AP R
Sbjct: 276 DFAPESSYNVVVLGEENTGSNDYKVTKSRIASLVADVFSNTQVAENKVVQVYSDPNAPLR 335
Query: 286 TYHDLFGSI 294
+LF +I
Sbjct: 336 PVDELFSTI 344
>Medtr4g092080.1 | anthocyanidin reductase ANR1-1 | HC |
chr4:36552578-36549900 | 20130731
Length = 338
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 28/134 (20%)
Query: 62 KKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKGRS-----ALSSTNPSLQIVKAD 116
KKK V G TG +++QLL KG+AV VRDLD AL S L + KA+
Sbjct: 11 KKKACVIGGTGFVASLLIKQLLEKGYAVNTTVRDLDSANKTSHLIALQSLG-ELNLFKAE 69
Query: 117 VTEGSDKLAEVIGDDSEAVVCATGFR-----------PGWDLLAPWKVDNFGTVNLVEAC 165
+T D A + G C F+ P D++ P G +N+++AC
Sbjct: 70 LTIEEDFDAPISG-------CELVFQLATPVNFASQDPENDMIKPAIK---GVLNVLKAC 119
Query: 166 -RKRKINRFILVSS 178
R +++ R IL SS
Sbjct: 120 VRAKEVKRVILTSS 133