Miyakogusa Predicted Gene
- Lj4g3v0258640.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0258640.2 Non Characterized Hit- tr|I3SUK1|I3SUK1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.5,0,FAMILY NOT
NAMED,NULL; no description,NULL; cobW,CobW/HypB/UreG domain; P-loop
containing nucleoside,CUFF.46766.2
(202 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g096770.1 | urease accessory protein UreG | HC | chr4:3850... 309 1e-84
>Medtr4g096770.1 | urease accessory protein UreG | HC |
chr4:38502747-38506639 | 20130731
Length = 274
Score = 309 bits (791), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 146/159 (91%), Positives = 154/159 (96%)
Query: 44 SYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGTGKT 103
S++G DGKVYHSHDGLAPHSHEPIYSPGFF+RRA PLINRDFNERAFT+GIGGPVGTGKT
Sbjct: 27 SFIGADGKVYHSHDGLAPHSHEPIYSPGFFSRRAQPLINRDFNERAFTVGIGGPVGTGKT 86
Query: 104 ALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIREDI 163
ALMLALC+ LRD YSLAAVTNDIFTKEDGEFLV++KALPEERIRAVETGGCPHAAIREDI
Sbjct: 87 ALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDI 146
Query: 164 SINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADY 202
SINLGPLEELSNLYK D+LLCESGGDNLAANFSRELADY
Sbjct: 147 SINLGPLEELSNLYKADLLLCESGGDNLAANFSRELADY 185