Miyakogusa Predicted Gene

Lj4g3v0258640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0258640.1 Non Characterized Hit- tr|I3SUK1|I3SUK1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.44,0,FAMILY
NOT NAMED,NULL; no description,NULL; cobW,CobW/HypB/UreG domain;
P-loop containing nucleoside,CUFF.46766.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g096770.1 | urease accessory protein UreG | HC | chr4:3850...   478   e-135

>Medtr4g096770.1 | urease accessory protein UreG | HC |
           chr4:38502747-38506639 | 20130731
          Length = 274

 Score =  478 bits (1229), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/248 (92%), Positives = 240/248 (96%)

Query: 44  SYVGPDGKVYHSHDGLAPHSHEPIYSPGFFTRRAPPLINRDFNERAFTIGIGGPVGTGKT 103
           S++G DGKVYHSHDGLAPHSHEPIYSPGFF+RRA PLINRDFNERAFT+GIGGPVGTGKT
Sbjct: 27  SFIGADGKVYHSHDGLAPHSHEPIYSPGFFSRRAQPLINRDFNERAFTVGIGGPVGTGKT 86

Query: 104 ALMLALCEFLRDNYSLAAVTNDIFTKEDGEFLVRNKALPEERIRAVETGGCPHAAIREDI 163
           ALMLALC+ LRD YSLAAVTNDIFTKEDGEFLV++KALPEERIRAVETGGCPHAAIREDI
Sbjct: 87  ALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHKALPEERIRAVETGGCPHAAIREDI 146

Query: 164 SINLGPLEELSNLYKTDILLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGI 223
           SINLGPLEELSNLYK D+LLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGI
Sbjct: 147 SINLGPLEELSNLYKADLLLCESGGDNLAANFSRELADYIIYIIDVSGGDKIPRKGGPGI 206

Query: 224 TQADLLVINKTDLAQAIGADLGVMERDSLRRREGEPFVFAQVKHKVGVEEIVNHVIQAWE 283
           TQADLLVINKTDLAQAIGADLGVMERD+LR R+G PFVFAQVKH VGVEEIVNHV+QAWE
Sbjct: 207 TQADLLVINKTDLAQAIGADLGVMERDALRMRDGGPFVFAQVKHNVGVEEIVNHVLQAWE 266

Query: 284 AATGKKRH 291
           AATGKKRH
Sbjct: 267 AATGKKRH 274