Miyakogusa Predicted Gene

Lj4g3v0244110.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0244110.1 Non Characterized Hit- tr|D5A9U7|D5A9U7_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,37.63,2e-18,seg,NULL,CUFF.46748.1
         (320 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g021620.1 | transmembrane protein, putative | HC | chr7:68...   459   e-129
Medtr4g096890.1 | transmembrane protein, putative | HC | chr4:38...   445   e-125
Medtr1g029440.1 | transmembrane protein, putative | HC | chr1:10...   169   3e-42
Medtr3g088975.1 | transmembrane protein, putative | HC | chr3:40...   167   1e-41
Medtr3g088965.1 | transmembrane protein, putative | LC | chr3:40...   114   1e-25
Medtr3g014430.1 | transmembrane protein, putative | LC | chr3:40...    72   5e-13
Medtr3g014620.1 | transmembrane protein, putative | HC | chr3:41...    53   3e-07

>Medtr7g021620.1 | transmembrane protein, putative | HC |
           chr7:6883195-6886674 | 20130731
          Length = 320

 Score =  459 bits (1181), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/320 (74%), Positives = 251/320 (78%)

Query: 1   MDLAPEELQFXXXXXXXXXXXXXPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPIISQL 60
           MDLA EELQF             PK SPKTFYLITLTLIFPLSFAILAHSLFTHP+ISQL
Sbjct: 1   MDLAQEELQFLNIPNILKESISIPKISPKTFYLITLTLIFPLSFAILAHSLFTHPLISQL 60

Query: 61  QSPFDDPSQTTHEWTLLLLIQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSYTISA 120
           QSPF DPSQT+H+WTLLL+IQF YLIFLFAFSLLSTAAVVFTVASLYTSKPVSFS TISA
Sbjct: 61  QSPFTDPSQTSHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSNTISA 120

Query: 121 IPKVFKRLFITFLWVSLLMIIYNFVFVXXXXXXXXXXDTQNSVLMLFSVLAMLVLFIGVH 180
           IPKVFKRLFITFLWV+LLMI YNF+FV          DT NSVL+ FSV+ + VLF+ VH
Sbjct: 121 IPKVFKRLFITFLWVTLLMICYNFLFVLCLVLMVVAIDTDNSVLLFFSVVFIFVLFLVVH 180

Query: 181 VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAAVLVCGYLVICGIIGGAFSXX 240
           VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAA+LVCGYL+IC +I G FS  
Sbjct: 181 VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAALLVCGYLLICAVISGMFSVV 240

Query: 241 XXXXXXXXXXFSRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSALHDHLG 300
                     FSRI                    QSVFYYVCKSYHHQGIDKSALHDHLG
Sbjct: 241 VVHGGDGYGVFSRIVIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQGIDKSALHDHLG 300

Query: 301 GYLGEYVPLKSSIQMENLDV 320
           GYLGEYVPLKSSIQMENLDV
Sbjct: 301 GYLGEYVPLKSSIQMENLDV 320


>Medtr4g096890.1 | transmembrane protein, putative | HC |
           chr4:38580522-38581484 | 20130731
          Length = 320

 Score =  445 bits (1144), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/320 (71%), Positives = 246/320 (76%)

Query: 1   MDLAPEELQFXXXXXXXXXXXXXPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPIISQL 60
           MDLAPEELQF             PK SPKTFYLITL LIFPLSFAILAHSLFTHP+IS +
Sbjct: 1   MDLAPEELQFLNIPNILKESISIPKISPKTFYLITLILIFPLSFAILAHSLFTHPLISHI 60

Query: 61  QSPFDDPSQTTHEWTLLLLIQFCYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSYTISA 120
           +SPF DP+QT+H+WTLLL+IQF YLIFLFAFSLLSTAAVVFTVASLYTSKPVSFS TISA
Sbjct: 61  ESPFTDPAQTSHDWTLLLIIQFFYLIFLFAFSLLSTAAVVFTVASLYTSKPVSFSNTISA 120

Query: 121 IPKVFKRLFITFLWVSLLMIIYNFVFVXXXXXXXXXXDTQNSVLMLFSVLAMLVLFIGVH 180
           IP VFKRLFITFLWV+LLM  YNFVF+          DT NSVL+ FSV+ + VLF+ VH
Sbjct: 121 IPNVFKRLFITFLWVTLLMFCYNFVFILCLVLMVIAVDTDNSVLLFFSVVLIFVLFLVVH 180

Query: 181 VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAAVLVCGYLVICGIIGGAFSXX 240
           VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYA++LVCGYL +C +I G FS  
Sbjct: 181 VYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYASLLVCGYLFLCAVISGMFSVI 240

Query: 241 XXXXXXXXXXFSRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYHHQGIDKSALHDHLG 300
                     FSRI                    QSVFYYVCKSYHHQ IDKSALHDHLG
Sbjct: 241 VVHGGDGYDVFSRIFIGGFLVGVLVIVNLVGLLVQSVFYYVCKSYHHQEIDKSALHDHLG 300

Query: 301 GYLGEYVPLKSSIQMENLDV 320
           GYLGEYVPLKSSIQMENLD+
Sbjct: 301 GYLGEYVPLKSSIQMENLDI 320


>Medtr1g029440.1 | transmembrane protein, putative | HC |
           chr1:10107059-10108491 | 20130731
          Length = 333

 Score =  169 bits (428), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/337 (37%), Positives = 162/337 (48%), Gaps = 21/337 (6%)

Query: 1   MDLAPEELQFXXXXXXXXXXXXXPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPIISQL 60
           MD   E++QF                  K F  ITLTL+ PLSF  L H   ++ I  ++
Sbjct: 1   MDKEQEDMQFLGFFGCYKESFKIIFSWRKIFTQITLTLLLPLSFIFLFHIEVSNLIFKKI 60

Query: 61  Q---SPFDDPSQTT-----------HEWTLLLLIQFCYLIFLFAFSLLSTAAVVFTVASL 106
           Q      D   Q T            ++  LLL +  Y  FL  FSLLST+A+V+T AS+
Sbjct: 61  QHTEEQIDHTQQGTPKYEKLTDIISSQFITLLLFKLVYFTFLLIFSLLSTSAIVYTTASI 120

Query: 107 YTSKPVSFSYTISAIPKVFKRLFITFLWVSLLMIIYNFV--FVXXXXXXXXXXDTQNSVL 164
           +TSK VSF   +  +PKV+KRL ITFL        YNF+  FV           +   VL
Sbjct: 121 FTSKDVSFKKVMKIVPKVWKRLMITFLCAYAAFFAYNFITFFVIILLAITISIKSGGIVL 180

Query: 165 MLFSVLAMLVLFIGVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAAVLVC 224
           ++F    M+  FIG  VY+T +W LASVV+VLE  YG  AM KS EL+KG++  +  +  
Sbjct: 181 LIF---IMIFYFIG-FVYLTLIWQLASVVTVLEDFYGIKAMVKSKELIKGKMGLSIFIFL 236

Query: 225 GYLVICGIIGGAFSXXXXXXXXXXXXFSRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCKS 284
              V   +I   F               R                     Q+V Y VCKS
Sbjct: 237 VLNVSFVLIRLVFKVVVVNGRWCFGYVDRTGYGILCFLFLSCLFLFGLVLQTVLYLVCKS 296

Query: 285 YHHQGIDKSALHDHLGGYLGEYVPLKS-SIQMENLDV 320
           YHH+ IDKSAL DHL  YLGEYVPL +  +Q+EN  V
Sbjct: 297 YHHENIDKSALADHLEVYLGEYVPLTAKDVQLENYRV 333


>Medtr3g088975.1 | transmembrane protein, putative | HC |
           chr3:40729182-40727803 | 20130731
          Length = 332

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/335 (34%), Positives = 164/335 (48%), Gaps = 18/335 (5%)

Query: 1   MDLAPEELQFXXXXXXXXXXXXXPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPIISQL 60
           MD   EE+QF                  K F  ITLTLI PLSF  L H   ++ +  ++
Sbjct: 1   MDREQEEMQFLGLFGIYKESYKIIISWRKIFSQITLTLILPLSFIFLIHIQISNILFRKI 60

Query: 61  QSPFDDPSQT--------------THEWTLLLLIQFCYLIFLFAFSLLSTAAVVFTVASL 106
            +  ++  +T              T EWT  LL +  Y   L  FSLLST+AVV+T+AS+
Sbjct: 61  MNNTNEILETQQGTPQYQKLSDIITSEWTTFLLFKLVYFTSLLIFSLLSTSAVVYTIASI 120

Query: 107 YTSKPVSFSYTISAIPKVFKRLFITFLWVSLLMIIYNFVFVXXXXXXXXXXDTQNSVLML 166
           YT++ V+F      +PKV+KRL +TFL       +YN + +          + ++  + +
Sbjct: 121 YTAREVTFKRVFGVVPKVWKRLMVTFLCTFFAFFVYNTLAILVFIIWALSINYKSGGVAI 180

Query: 167 FSVLAMLVLFIGVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAAVLVCGY 226
             ++ +L  F+G+ +Y+T +W LASVV+VLE  YGF AM KS  L+KG++  + ++    
Sbjct: 181 LVIIGIL-YFVGI-LYLTIIWQLASVVTVLEDSYGFKAMMKSNNLIKGKIGLSTLIFLKL 238

Query: 227 LVICGIIGGAFSXXXXXXXXXXXXFSRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCKSYH 286
            V    I   F+              R                     Q+V Y+VCKSYH
Sbjct: 239 NVSFFGIQFLFTKLVVKAWGLTLV-DRTAYGILCFVLLSHLFLFGLVIQTVLYFVCKSYH 297

Query: 287 HQGIDKSALHDHLGGYLGEYVPLKS-SIQMENLDV 320
           HQ IDKSAL DHL  Y GEY PLK   +Q+EN  V
Sbjct: 298 HQSIDKSALSDHLEVYHGEYEPLKDKDVQLENYHV 332


>Medtr3g088965.1 | transmembrane protein, putative | LC |
           chr3:40725497-40724514 | 20130731
          Length = 327

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 148/325 (45%), Gaps = 19/325 (5%)

Query: 1   MDLAPEELQFXXXXXXXXXXXXXPKRSPKTFYLITLTLIFPLSFAILAHSLFTHPII--- 57
           M +  E++QF                  K    ITL LI PL+F  L     +  ++   
Sbjct: 1   MAIEQEKMQFLGLFGVYKESYKLMFSWRKLLSQITLILIIPLTFNFLIQIELSDFVLGKI 60

Query: 58  ----SQLQSPFDDPSQ-------TTHEWTLLLLIQFCYLIFLFAFSLLSTAAVVFTVASL 106
               +Q+ +   D +Q        T EW +  LI+  Y I +F+  L ST+A+V+TVAS+
Sbjct: 61  LHHSNQMTNHHLDTAQPQNLTEIITKEWAIFFLIKIAYFILIFSLYLFSTSAIVYTVASI 120

Query: 107 YT-SKPVSFSYTISAIPKVFKRLFITFLWVSLLMIIYNFVFVXXXXXXXXXXDTQNSVLM 165
           YT +K ++F+  +S I  + KRL +TFL        YN + +            +N   +
Sbjct: 121 YTGNKDIAFNKVMSVITNLSKRLMVTFLCTLTAGFFYNIIAMVIAIIFALTFGVRNGGSV 180

Query: 166 LFSVLAMLVLFIGVHVYITALWHLASVVSVLEPLYGFAAMKKSYELLKGRVRYAAVLVCG 225
              ++  ++ F+G+ VY+  +W LA+VV+VLE  YGF AM KS EL+KG++  +  +   
Sbjct: 181 AGFIIIGILYFVGL-VYLNVVWQLANVVTVLEDSYGFEAMMKSKELIKGKMGLSIFITLQ 239

Query: 226 YLVICGIIGGAFSXXXXX--XXXXXXXFSRIXXXXXXXXXXXXXXXXXXXXQSVFYYVCK 283
           +     +I   F                SRI                    Q+V Y+VCK
Sbjct: 240 FNFCFFVIRFLFGMLVVNGWKWFELSLMSRITIGFVCFLFLSHLFLLILIMQTVLYFVCK 299

Query: 284 SYHHQGIDK-SALHDHLGGYLGEYV 307
           SY ++ IDK S   +H+  + GEYV
Sbjct: 300 SYQNESIDKCSPSLEHVKVHQGEYV 324


>Medtr3g014430.1 | transmembrane protein, putative | LC |
           chr3:4098029-4098986 | 20130731
          Length = 142

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 204 AMKKSYELLKGRVRYAAVLVCGYLVICGIIGGAFSXXXXXXXXXXXXFSRIXXXXXXXXX 263
           AMKKSYELLKGRV YA+V VCGYL+IC ++G  FS            FSRI         
Sbjct: 17  AMKKSYELLKGRVSYASVFVCGYLLICEVMGRMFS-----VVVVHDVFSRIVIGGFLVGV 71

Query: 264 XXXXXXXXXXXQSVFYYVCKSY-----HHQGIDKSALHDHLG 300
                       S FYYVCKSY     H QGIDK  + + LG
Sbjct: 72  LIIVNLVVMLVSSEFYYVCKSYHHHHHHQQGIDK-CIAEELG 112


>Medtr3g014620.1 | transmembrane protein, putative | HC |
           chr3:4181710-4181453 | 20130731
          Length = 56

 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 1/45 (2%)

Query: 164 LMLFSVLAMLVLFIGVHVYITALWHLASVVSVLEPLYGFAAMKKS 208
           L  F VL  L+L +  HVYIT LWHLASVVSVL+ +YGF A+KKS
Sbjct: 13  LFFFCVLIFLLLHVA-HVYITDLWHLASVVSVLQHVYGFVALKKS 56