Miyakogusa Predicted Gene
- Lj4g3v0244090.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v0244090.1 Non Characterized Hit- tr|I1NZF9|I1NZF9_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=3
SV=1,25.91,0.000000000004,ABC_TRANSPORTER_2,ABC transporter-like;
RNASE L INHIBITOR,NULL; ATP-BINDING TRANSPORT
PROTEIN-RELATE,CUFF.46738.1
(295 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g114170.1 | RNase L inhibitor ABC domain protein | HC | ch... 280 2e-75
Medtr1g114170.2 | RNase L inhibitor ABC domain protein | HC | ch... 280 2e-75
Medtr1g114170.3 | RNase L inhibitor ABC domain protein | HC | ch... 280 2e-75
Medtr1g025075.2 | RNase L inhibitor ABC superfamily protein, put... 273 1e-73
Medtr1g025075.1 | RNase L inhibitor ABC superfamily protein, put... 273 2e-73
Medtr4g007890.1 | RNase L inhibitor ABC domain protein | HC | ch... 269 2e-72
Medtr1g024860.1 | RNase L inhibitor ABC domain protein | HC | ch... 248 6e-66
>Medtr1g114170.1 | RNase L inhibitor ABC domain protein | HC |
chr1:51514340-51519700 | 20130731
Length = 606
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 174/235 (74%), Gaps = 4/235 (1%)
Query: 63 VADDFNESENNEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIR 122
VA+ E+ YKYP M T G FRL VVEG+F+DS++IV+LG+N TGKTTFIR
Sbjct: 333 VAETPQETAEEAQTYARYKYPTMTKTQGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIR 392
Query: 123 MLAGLLKADTV----DVKMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDV 178
MLAGLLK DT+ DV+MP FNVSYKPQ + +VR LL+++I DA T PQF+SDV
Sbjct: 393 MLAGLLKPDTIEGGSDVEMPEFNVSYKPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDV 452
Query: 179 MEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVK 238
M+PLLI QLMDQEV LS ELQ++ALCLCLGKPADIY+ID S +L EQ A+V+K
Sbjct: 453 MKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIK 512
Query: 239 KFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+F L AKKTAF+ E + +A YLA RVIV+EG+PSI CTA+ P+SLL+GM+ FLS
Sbjct: 513 RFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDCTANCPQSLLTGMNLFLS 567
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 75 DKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADTVD 134
DK+ T++Y L R + +V+ L+G N GK+T +++LAG LK +
Sbjct: 80 DKDTTHRYGPNTFKLHRLPVP------RPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGR 133
Query: 135 VKMPV-------------------------FNVSYKPQMFDLQVPTTVRCLLNEQIPDAC 169
P KPQ D +P V+ + Q+ D
Sbjct: 134 FTEPPDWQEILTHFRGSELQNYFTRILEDDLKAIIKPQYVD-HIPKAVQGNVG-QVLDQK 191
Query: 170 TLPQFVSDVMEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQ 229
+ L +NQ++D+ V +LS ELQ+ A+ + + A+IY+ D S++L +Q
Sbjct: 192 NERDMKERLCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQ 251
Query: 230 ANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMS 289
AQVV+ L V E ++S+ +YL+ + GKP P S+ G++
Sbjct: 252 RLKAAQVVRS-LLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGIN 310
Query: 290 SFLSA 294
FLS
Sbjct: 311 IFLSG 315
>Medtr1g114170.2 | RNase L inhibitor ABC domain protein | HC |
chr1:51514432-51519597 | 20130731
Length = 606
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 174/235 (74%), Gaps = 4/235 (1%)
Query: 63 VADDFNESENNEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIR 122
VA+ E+ YKYP M T G FRL VVEG+F+DS++IV+LG+N TGKTTFIR
Sbjct: 333 VAETPQETAEEAQTYARYKYPTMTKTQGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIR 392
Query: 123 MLAGLLKADTV----DVKMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDV 178
MLAGLLK DT+ DV+MP FNVSYKPQ + +VR LL+++I DA T PQF+SDV
Sbjct: 393 MLAGLLKPDTIEGGSDVEMPEFNVSYKPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDV 452
Query: 179 MEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVK 238
M+PLLI QLMDQEV LS ELQ++ALCLCLGKPADIY+ID S +L EQ A+V+K
Sbjct: 453 MKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIK 512
Query: 239 KFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+F L AKKTAF+ E + +A YLA RVIV+EG+PSI CTA+ P+SLL+GM+ FLS
Sbjct: 513 RFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDCTANCPQSLLTGMNLFLS 567
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 75 DKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADTVD 134
DK+ T++Y L R + +V+ L+G N GK+T +++LAG LK +
Sbjct: 80 DKDTTHRYGPNTFKLHRLPVP------RPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGR 133
Query: 135 VKMPV-------------------------FNVSYKPQMFDLQVPTTVRCLLNEQIPDAC 169
P KPQ D +P V+ + Q+ D
Sbjct: 134 FTEPPDWQEILTHFRGSELQNYFTRILEDDLKAIIKPQYVD-HIPKAVQGNVG-QVLDQK 191
Query: 170 TLPQFVSDVMEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQ 229
+ L +NQ++D+ V +LS ELQ+ A+ + + A+IY+ D S++L +Q
Sbjct: 192 NERDMKERLCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQ 251
Query: 230 ANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMS 289
AQVV+ L V E ++S+ +YL+ + GKP P S+ G++
Sbjct: 252 RLKAAQVVRS-LLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGIN 310
Query: 290 SFLSA 294
FLS
Sbjct: 311 IFLSG 315
>Medtr1g114170.3 | RNase L inhibitor ABC domain protein | HC |
chr1:51514432-51519597 | 20130731
Length = 606
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 141/235 (60%), Positives = 174/235 (74%), Gaps = 4/235 (1%)
Query: 63 VADDFNESENNEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIR 122
VA+ E+ YKYP M T G FRL VVEG+F+DS++IV+LG+N TGKTTFIR
Sbjct: 333 VAETPQETAEEAQTYARYKYPTMTKTQGNFRLHVVEGEFTDSQIIVMLGENGTGKTTFIR 392
Query: 123 MLAGLLKADTV----DVKMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDV 178
MLAGLLK DT+ DV+MP FNVSYKPQ + +VR LL+++I DA T PQF+SDV
Sbjct: 393 MLAGLLKPDTIEGGSDVEMPEFNVSYKPQKISPKSQLSVRHLLHQRIRDAYTHPQFISDV 452
Query: 179 MEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVK 238
M+PLLI QLMDQEV LS ELQ++ALCLCLGKPADIY+ID S +L EQ A+V+K
Sbjct: 453 MKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIK 512
Query: 239 KFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+F L AKKTAF+ E + +A YLA RVIV+EG+PSI CTA+ P+SLL+GM+ FLS
Sbjct: 513 RFILHAKKTAFIVEHDFIMATYLADRVIVYEGQPSIDCTANCPQSLLTGMNLFLS 567
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 105/245 (42%), Gaps = 34/245 (13%)
Query: 75 DKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADTVD 134
DK+ T++Y L R + +V+ L+G N GK+T +++LAG LK +
Sbjct: 80 DKDTTHRYGPNTFKLHRLPVP------RPGQVLGLVGTNGIGKSTALKVLAGKLKPNLGR 133
Query: 135 VKMPV-------------------------FNVSYKPQMFDLQVPTTVRCLLNEQIPDAC 169
P KPQ D +P V+ + Q+ D
Sbjct: 134 FTEPPDWQEILTHFRGSELQNYFTRILEDDLKAIIKPQYVD-HIPKAVQGNVG-QVLDQK 191
Query: 170 TLPQFVSDVMEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQ 229
+ L +NQ++D+ V +LS ELQ+ A+ + + A+IY+ D S++L +Q
Sbjct: 192 NERDMKERLCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQ 251
Query: 230 ANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMS 289
AQVV+ L V E ++S+ +YL+ + GKP P S+ G++
Sbjct: 252 RLKAAQVVRS-LLRPNSYVIVVEHDLSVLDYLSDFICCLYGKPGAYGVVTLPFSVREGIN 310
Query: 290 SFLSA 294
FLS
Sbjct: 311 IFLSG 315
>Medtr1g025075.2 | RNase L inhibitor ABC superfamily protein,
putative | HC | chr1:8000040-8005224 | 20130731
Length = 527
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 172/235 (73%), Gaps = 4/235 (1%)
Query: 63 VADDFNESENNEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIR 122
VA++ E+ +KYP M T G FRL VEG+F+DS++IV+LG+N TGKTTFIR
Sbjct: 254 VAENPQETAEEAQTYARFKYPTMTKTQGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIR 313
Query: 123 MLAGLLKADTV----DVKMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDV 178
MLAGLLK DT DV+MP FNVSYKPQ + VR +L+++I DA T PQF+SDV
Sbjct: 314 MLAGLLKPDTTEGVSDVEMPEFNVSYKPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDV 373
Query: 179 MEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVK 238
M+PLLI QLMDQEV LS ELQ++ALCLCLGKPADIY+ID S +L EQ A+V+K
Sbjct: 374 MKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIK 433
Query: 239 KFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+F L AKKTAF+ E + +A YLA +VIV+EG+PSI CTA+ P+SLL+GM+ FLS
Sbjct: 434 RFILHAKKTAFIVEHDFIMATYLADKVIVYEGQPSINCTANCPQSLLTGMNLFLS 488
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 28/216 (12%)
Query: 104 SEVIVLLGKNATGKTTFIRMLAGLLKADTVDVKMPV------------------------ 139
+V+ L+G N GK+T +++LAG LK + P
Sbjct: 24 GQVLGLVGTNGIGKSTALKVLAGKLKPNLGRFTEPPDWQEILTHFRGSELQNYFTRILED 83
Query: 140 -FNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDVMEPLLINQLMDQEVMELSSA 198
KPQ D +P V+ + + + D+ + L +NQ++D+ V +LS
Sbjct: 84 DLKAIIKPQYVD-HIPKAVQGNVGQTL-DSKNERDMKEKLCADLELNQVIDRNVGDLSGG 141
Query: 199 ELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVKKFFLGAKKTAFVAEDNMSIA 258
ELQ+ A+ + + A+IY+ D S++L +Q AQVV+ L V E ++S+
Sbjct: 142 ELQRFAIAVVAIQNAEIYMFDEPSSYLDVKQRLKAAQVVRS-LLRPNSFVIVVEHDLSVL 200
Query: 259 NYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLSA 294
+YL+ + GKP + P S+ G++ FLS
Sbjct: 201 DYLSDFICCLYGKPGVYGVVTLPFSVREGINIFLSG 236
>Medtr1g025075.1 | RNase L inhibitor ABC superfamily protein,
putative | HC | chr1:7999442-8005224 | 20130731
Length = 607
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 137/235 (58%), Positives = 172/235 (73%), Gaps = 4/235 (1%)
Query: 63 VADDFNESENNEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIR 122
VA++ E+ +KYP M T G FRL VEG+F+DS++IV+LG+N TGKTTFIR
Sbjct: 334 VAENPQETAEEAQTYARFKYPTMTKTQGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIR 393
Query: 123 MLAGLLKADTV----DVKMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDV 178
MLAGLLK DT DV+MP FNVSYKPQ + VR +L+++I DA T PQF+SDV
Sbjct: 394 MLAGLLKPDTTEGVSDVEMPEFNVSYKPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDV 453
Query: 179 MEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVK 238
M+PLLI QLMDQEV LS ELQ++ALCLCLGKPADIY+ID S +L EQ A+V+K
Sbjct: 454 MKPLLIEQLMDQEVQNLSGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVAAKVIK 513
Query: 239 KFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+F L AKKTAF+ E + +A YLA +VIV+EG+PSI CTA+ P+SLL+GM+ FLS
Sbjct: 514 RFILHAKKTAFIVEHDFIMATYLADKVIVYEGQPSINCTANCPQSLLTGMNLFLS 568
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 108/247 (43%), Gaps = 34/247 (13%)
Query: 73 NEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADT 132
N DK+ T++Y L R + +V+ L+G N GK+T +++LAG LK +
Sbjct: 79 NLDKDTTHRYGPNTFKLHRLPVP------RPGQVLGLVGTNGIGKSTALKVLAGKLKPNL 132
Query: 133 VDVKMPV-------------------------FNVSYKPQMFDLQVPTTVRCLLNEQIPD 167
P KPQ D +P V+ + + + D
Sbjct: 133 GRFTEPPDWQEILTHFRGSELQNYFTRILEDDLKAIIKPQYVD-HIPKAVQGNVGQTL-D 190
Query: 168 ACTLPQFVSDVMEPLLINQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGP 227
+ + L +NQ++D+ V +LS ELQ+ A+ + + A+IY+ D S++L
Sbjct: 191 SKNERDMKEKLCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQNAEIYMFDEPSSYLDV 250
Query: 228 EQANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSG 287
+Q AQVV+ L V E ++S+ +YL+ + GKP + P S+ G
Sbjct: 251 KQRLKAAQVVRS-LLRPNSFVIVVEHDLSVLDYLSDFICCLYGKPGVYGVVTLPFSVREG 309
Query: 288 MSSFLSA 294
++ FLS
Sbjct: 310 INIFLSG 316
>Medtr4g007890.1 | RNase L inhibitor ABC domain protein | HC |
chr4:1305306-1299354 | 20130731
Length = 600
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 168/217 (77%), Gaps = 3/217 (1%)
Query: 80 YKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADTV---DVK 136
YKYP M T G+FRLRV G+F+DS+++V++G+N TGKTTFIRML G LK DT+ D++
Sbjct: 345 YKYPTMTKTQGKFRLRVAGGEFTDSQIVVMIGENGTGKTTFIRMLVGSLKPDTIGGSDLE 404
Query: 137 MPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDVMEPLLINQLMDQEVMELS 196
MP FN+SYKPQ + +TVR LL+E+I + T PQF+SDVM+PLLI QLMD+EV+ LS
Sbjct: 405 MPEFNISYKPQTITPKFKSTVRHLLHERIHKSYTDPQFISDVMKPLLIEQLMDKEVLNLS 464
Query: 197 SAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVKKFFLGAKKTAFVAEDNMS 256
ELQ++ LCLCLGKPADIY+ID S +L EQ A+V+K+F L AKKTAFV E +
Sbjct: 465 GGELQRVYLCLCLGKPADIYLIDEPSAYLDSEQRIIAAKVIKRFILHAKKTAFVVEHDFI 524
Query: 257 IANYLATRVIVFEGKPSITCTAHSPESLLSGMSSFLS 293
+A YLA RVIV+EG+PSI CTA+SP+SLL+GM+ FLS
Sbjct: 525 MATYLADRVIVYEGQPSIDCTANSPQSLLTGMNLFLS 561
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 73 NEDKEGTYKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADT 132
N DKE T++Y L R + +V+ L+GKN GK+T +++LAG L+ +
Sbjct: 74 NLDKETTHRYGPNTFKLHRLPIP------RPGKVLGLVGKNGIGKSTALKVLAGELEPNL 127
Query: 133 VDVKMP--------VFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVS-------- 176
P F S F ++ ++ Q D + V+
Sbjct: 128 GRFTNPPKWPEILTFFRGSELQNYFTRFRGEGLKAIIKPQYVDDFRRKEQVNVGQALDQK 187
Query: 177 ---DVMEPLL----INQLMDQEVMELSSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQ 229
D+ E L +NQ++D+ V++LS ELQ+ A+ + A+IY+ D S++L +Q
Sbjct: 188 NERDMKEELCAALELNQVIDRNVVDLSGGELQRFAIAGIAIQNAEIYMFDEPSSYLDVKQ 247
Query: 230 ANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGKPSITCTAHSPESLLSGMS 289
AQVV+ L V E ++S+ +YL+ + G P + P S+ G++
Sbjct: 248 RLKAAQVVRS-LLRHNSYVIVVEHDLSVLDYLSDFICCLYGTPGVYGVVTLPFSVREGIN 306
Query: 290 SFLSA 294
FLS
Sbjct: 307 IFLSG 311
>Medtr1g024860.1 | RNase L inhibitor ABC domain protein | HC |
chr1:7908945-7900686 | 20130731
Length = 529
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 124/199 (62%), Positives = 151/199 (75%), Gaps = 4/199 (2%)
Query: 80 YKYPAMNITLGRFRLRVVEGQFSDSEVIVLLGKNATGKTTFIRMLAGLLKADTV----DV 135
+KYP M T G FRL VEG+F+DS++IV+LG+N TGKTTFIRMLAGLLK DT DV
Sbjct: 331 FKYPTMTKTQGNFRLHAVEGEFTDSQIIVMLGENGTGKTTFIRMLAGLLKPDTTEGVSDV 390
Query: 136 KMPVFNVSYKPQMFDLQVPTTVRCLLNEQIPDACTLPQFVSDVMEPLLINQLMDQEVMEL 195
+MP FNVSYKPQ + VR +L+++I DA T PQF+SDVM+PLLI QLMDQEV L
Sbjct: 391 EMPEFNVSYKPQKISPKSQLPVRYMLHQKIRDAYTHPQFISDVMKPLLIEQLMDQEVQNL 450
Query: 196 SSAELQKLALCLCLGKPADIYVIDGLSTHLGPEQANFVAQVVKKFFLGAKKTAFVAEDNM 255
S ELQ++ALCLCLGKPADIY+ID S +L EQ VA+V+K+F L AKKTAF+ E +
Sbjct: 451 SGGELQRVALCLCLGKPADIYLIDEPSAYLDSEQRIVVAKVIKRFILHAKKTAFIVEHDF 510
Query: 256 SIANYLATRVIVFEGKPSI 274
+ANYLA +VIV EG+PSI
Sbjct: 511 IMANYLADKVIVLEGQPSI 529
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 104 SEVIVLLGKNATGKTTFIRMLAGLLKADTVDVKMPVFNVSYKPQMFDLQVPTTVRCLLNE 163
+V+ L+G N GK+T +++LAG LK + P ++ + Q +
Sbjct: 103 GQVLGLVGTNGIGKSTALKILAGKLKPNLGRFTDPP---DWQEVLTHFQGSELQNYFTHI 159
Query: 164 QIPD--ACTLPQFVSDV----------MEPLLINQLMDQEVMELSSAELQKLALCLCLGK 211
Q D A PQ+V D+ L +NQ++D+ V +LS ELQ+ A+ + +
Sbjct: 160 QEGDLKAVIKPQYVDDIPNHVYEGKALCADLELNQVIDRNVGDLSGGELQRFAIAVVAIQ 219
Query: 212 PADIYVIDGLSTHLGPEQANFVAQVVKKFFLGAKKTAFVAEDNMSIANYLATRVIVFEGK 271
A+IY+ D S++L +Q AQVV+ + F ++S+ +YL+ + GK
Sbjct: 220 NAEIYMFDEPSSYLDVKQRLKAAQVVRSLL---RPNRF---HDLSVLDYLSDFICCLYGK 273
Query: 272 PSITCTAHSPESLLSGMSSFLSA 294
P + P S+ G++ FLS
Sbjct: 274 PDVYGVVTLPFSVREGINIFLSG 296