Miyakogusa Predicted Gene

Lj4g3v0216630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v0216630.1 Non Characterized Hit- tr|K4CBD0|K4CBD0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,55.43,3e-19,
,CUFF.46702.1
         (103 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g088550.1 | hypothetical protein | HC | chr5:38430198-3842...   159   6e-40
Medtr7g058970.1 | hypothetical protein | HC | chr7:21274120-2127...   141   1e-34

>Medtr5g088550.1 | hypothetical protein | HC |
           chr5:38430198-38429760 | 20130731
          Length = 111

 Score =  159 bits (402), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 82/106 (77%), Positives = 91/106 (85%), Gaps = 9/106 (8%)

Query: 1   MWHLLAAVTRNLHNTRKSSKVADENMFQQGNT---VEMFGHERGRR-QHGWG-LVLSILQ 55
           MWHLL    RNL+NTRKSSKVADENMFQQGN    V++FGHER RR QHGWG +V SILQ
Sbjct: 1   MWHLL----RNLNNTRKSSKVADENMFQQGNNIVEVQIFGHERRRRSQHGWGNIVFSILQ 56

Query: 56  APMSMLSCVSHPQVNGPDGVWVTGGEFSQISEMNYLMVSDSMRYAI 101
           AP+S+LSCVSHPQVNG DG WV+GGEFSQISEMN+LMV+DSMRY I
Sbjct: 57  APISILSCVSHPQVNGSDGAWVSGGEFSQISEMNHLMVNDSMRYVI 102


>Medtr7g058970.1 | hypothetical protein | HC |
           chr7:21274120-21272964 | 20130731
          Length = 121

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 91/112 (81%), Gaps = 10/112 (8%)

Query: 1   MWHLLAAVTR-NLHNTRKSSKVADENMFQQGN---TVEMFGHERGRRQHGWG-----LVL 51
           MWHL+AAV R N++  +KSSKVADENMF++GN    V MFG ERGRRQHG G     ++ 
Sbjct: 11  MWHLVAAVRRINIYKMKKSSKVADENMFEEGNRGVEVAMFGGERGRRQHGHGWSGFSVIY 70

Query: 52  SILQAPMSMLSCVSHPQVNGPDGVWVTGGEFSQISEMNYLMVSDSMRYAILM 103
           +ILQAP+S+LSC+S+P+VNG DGVW T GEF QISE+N++MV+DSMRYAILM
Sbjct: 71  AILQAPISILSCLSNPRVNGSDGVWST-GEFGQISEINHIMVNDSMRYAILM 121